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Commit b68406f4 authored by Marty Kandes's avatar Marty Kandes
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naked-singularity-v0.6.2 :: updated mxnet-cpu.def and mxnet-gpu.def for

comet to MXNet v1.3.1
parent f1727c38
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...@@ -46,8 +46,8 @@ AUTHOR ...@@ -46,8 +46,8 @@ AUTHOR
VERSION VERSION
0.6.1 0.6.2
LAST UPDATED LAST UPDATED
Monday, January 14th, 2019 Tuesday, January 15th, 2019
...@@ -5,7 +5,7 @@ OSVersion: xenial ...@@ -5,7 +5,7 @@ OSVersion: xenial
%labels %labels
APPLICATION_NAME mxnet-cpu APPLICATION_NAME mxnet-cpu
APPLICATION_VERSION 1.3.0 APPLICATION_VERSION 1.3.1
APPLICATION_URL http://mxnet.io APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet SYSTEM_NAME comet
...@@ -17,7 +17,7 @@ OSVersion: xenial ...@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu AUTHOR_EMAIL mkandes@sdsc.edu
LAST_UPDATED 20181011 LAST_UPDATED 20190115
%setup %setup
...@@ -97,9 +97,9 @@ OSVersion: xenial ...@@ -97,9 +97,9 @@ OSVersion: xenial
cd /opt cd /opt
# Download, build and install MXNet core shared library # Download, build and install MXNet core shared library
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.0/apache-mxnet-src-1.3.0-incubating.tar.gz wget https://github.com/apache/incubator-mxnet/releases/download/1.3.1/apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz tar -xzvf apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
cd /opt/apache-mxnet-src-1.3.0-incubating cd /opt/apache-mxnet-src-1.3.1.rc0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_DIST_KVSTORE=1 make USE_OPENCV=1 USE_BLAS=openblas USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings # Install MXNet python(2) bindings
...@@ -108,7 +108,7 @@ OSVersion: xenial ...@@ -108,7 +108,7 @@ OSVersion: xenial
apt-get -y install python-pip apt-get -y install python-pip
apt-get -y install libgfortran3 apt-get -y install libgfortran3
cd /opt/apache-mxnet-src-1.3.0-incubating/python cd /opt/apache-mxnet-src-1.3.1.rc0-incubating/python
python setup.py install python setup.py install
# Install common python packages for data science and machine learning applications # Install common python packages for data science and machine learning applications
...@@ -123,7 +123,6 @@ OSVersion: xenial ...@@ -123,7 +123,6 @@ OSVersion: xenial
apt-get -y install python-mlpy apt-get -y install python-mlpy
apt-get -y install python-nltk apt-get -y install python-nltk
apt-get -y install python-statsmodels apt-get -y install python-statsmodels
apt-get -y install libopencv-dev
apt-get -y install python-opencv apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences # Install common python packages for the biological and biomedical sciences
...@@ -138,6 +137,7 @@ OSVersion: xenial ...@@ -138,6 +137,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools apt-get -y install python3-setuptools
apt-get -y install python3-pip apt-get -y install python3-pip
python3 setup.py clean --all
python3 setup.py install python3 setup.py install
# Install common python3 packages for data science and machine learning applications # Install common python3 packages for data science and machine learning applications
......
...@@ -5,7 +5,7 @@ OSVersion: xenial ...@@ -5,7 +5,7 @@ OSVersion: xenial
%labels %labels
APPLICATION_NAME mxnet-gpu APPLICATION_NAME mxnet-gpu
APPLICATION_VERSION 1.3.0 APPLICATION_VERSION 1.3.1
APPLICATION_URL http://mxnet.io APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet SYSTEM_NAME comet
...@@ -17,7 +17,7 @@ OSVersion: xenial ...@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu AUTHOR_EMAIL mkandes@sdsc.edu
LAST_UPDATED 20181011 LAST_UPDATED 20190115
%setup %setup
...@@ -274,9 +274,9 @@ OSVersion: xenial ...@@ -274,9 +274,9 @@ OSVersion: xenial
cd /opt cd /opt
# Download, build and install MXNet core shared library # Download, build and install MXNet core shared library
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.0/apache-mxnet-src-1.3.0-incubating.tar.gz wget https://github.com/apache/incubator-mxnet/releases/download/1.3.1/apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz tar -xzvf apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
cd /opt/apache-mxnet-src-1.3.0-incubating cd /opt/apache-mxnet-src-1.3.1.rc0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_CUDA=1 USE_CUDA_PATH=/usr/local/cuda USE_CUDNN=1 USE_DIST_KVSTORE=1 make USE_OPENCV=1 USE_BLAS=openblas USE_CUDA=1 USE_CUDA_PATH=/usr/local/cuda USE_CUDNN=1 USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings # Install MXNet python(2) bindings
...@@ -285,7 +285,7 @@ OSVersion: xenial ...@@ -285,7 +285,7 @@ OSVersion: xenial
apt-get -y install python-pip apt-get -y install python-pip
apt-get -y install libgfortran3 apt-get -y install libgfortran3
cd /opt/apache-mxnet-src-1.3.0-incubating/python cd /opt/apache-mxnet-src-1.3.1.rc0-incubating/python
python setup.py install python setup.py install
# Install common python packages for data science and machine learning applications # Install common python packages for data science and machine learning applications
...@@ -300,7 +300,6 @@ OSVersion: xenial ...@@ -300,7 +300,6 @@ OSVersion: xenial
apt-get -y install python-mlpy apt-get -y install python-mlpy
apt-get -y install python-nltk apt-get -y install python-nltk
apt-get -y install python-statsmodels apt-get -y install python-statsmodels
apt-get -y install libopencv-dev
apt-get -y install python-opencv apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences # Install common python packages for the biological and biomedical sciences
...@@ -315,6 +314,7 @@ OSVersion: xenial ...@@ -315,6 +314,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools apt-get -y install python3-setuptools
apt-get -y install python3-pip apt-get -y install python3-pip
python3 setup.py clean --all
python3 setup.py install python3 setup.py install
# Install common python3 packages for data science and machine learning applications # Install common python3 packages for data science and machine learning applications
......
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