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IMGW
Singularity
Commits
b68406f4
Commit
b68406f4
authored
6 years ago
by
Marty Kandes
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naked-singularity-v0.6.2 :: updated mxnet-cpu.def and mxnet-gpu.def for
comet to MXNet v1.3.1
parent
f1727c38
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README
+2
-2
2 additions, 2 deletions
README
definition-files/comet/mxnet/mxnet-cpu.def
+7
-7
7 additions, 7 deletions
definition-files/comet/mxnet/mxnet-cpu.def
definition-files/comet/mxnet/mxnet-gpu.def
+7
-7
7 additions, 7 deletions
definition-files/comet/mxnet/mxnet-gpu.def
with
16 additions
and
16 deletions
README
+
2
−
2
View file @
b68406f4
...
@@ -46,8 +46,8 @@ AUTHOR
...
@@ -46,8 +46,8 @@ AUTHOR
VERSION
VERSION
0.6.
1
0.6.
2
LAST UPDATED
LAST UPDATED
Mon
day, January 1
4
th, 2019
Tues
day, January 1
5
th, 2019
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definition-files/comet/mxnet/mxnet-cpu.def
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7
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7
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b68406f4
...
@@ -5,7 +5,7 @@ OSVersion: xenial
...
@@ -5,7 +5,7 @@ OSVersion: xenial
%labels
%labels
APPLICATION_NAME mxnet-cpu
APPLICATION_NAME mxnet-cpu
APPLICATION_VERSION 1.3.
0
APPLICATION_VERSION 1.3.
1
APPLICATION_URL http://mxnet.io
APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet
SYSTEM_NAME comet
...
@@ -17,7 +17,7 @@ OSVersion: xenial
...
@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes
AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu
AUTHOR_EMAIL mkandes@sdsc.edu
LAST_UPDATED 201
81
011
LAST_UPDATED 201
9
011
5
%setup
%setup
...
@@ -97,9 +97,9 @@ OSVersion: xenial
...
@@ -97,9 +97,9 @@ OSVersion: xenial
cd /opt
cd /opt
# Download, build and install MXNet core shared library
# Download, build and install MXNet core shared library
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.
0
/apache-mxnet-src-1.3.0-incubating.tar.gz
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.
1
/apache-mxnet-src-1.3.
1.rc
0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.
1.rc
0-incubating.tar.gz
cd /opt/apache-mxnet-src-1.3.0-incubating
cd /opt/apache-mxnet-src-1.3.
1.rc
0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_DIST_KVSTORE=1
make USE_OPENCV=1 USE_BLAS=openblas USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings
# Install MXNet python(2) bindings
...
@@ -108,7 +108,7 @@ OSVersion: xenial
...
@@ -108,7 +108,7 @@ OSVersion: xenial
apt-get -y install python-pip
apt-get -y install python-pip
apt-get -y install libgfortran3
apt-get -y install libgfortran3
cd /opt/apache-mxnet-src-1.3.0-incubating/python
cd /opt/apache-mxnet-src-1.3.
1.rc
0-incubating/python
python setup.py install
python setup.py install
# Install common python packages for data science and machine learning applications
# Install common python packages for data science and machine learning applications
...
@@ -123,7 +123,6 @@ OSVersion: xenial
...
@@ -123,7 +123,6 @@ OSVersion: xenial
apt-get -y install python-mlpy
apt-get -y install python-mlpy
apt-get -y install python-nltk
apt-get -y install python-nltk
apt-get -y install python-statsmodels
apt-get -y install python-statsmodels
apt-get -y install libopencv-dev
apt-get -y install python-opencv
apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences
# Install common python packages for the biological and biomedical sciences
...
@@ -138,6 +137,7 @@ OSVersion: xenial
...
@@ -138,6 +137,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools
apt-get -y install python3-setuptools
apt-get -y install python3-pip
apt-get -y install python3-pip
python3 setup.py clean --all
python3 setup.py install
python3 setup.py install
# Install common python3 packages for data science and machine learning applications
# Install common python3 packages for data science and machine learning applications
...
...
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definition-files/comet/mxnet/mxnet-gpu.def
+
7
−
7
View file @
b68406f4
...
@@ -5,7 +5,7 @@ OSVersion: xenial
...
@@ -5,7 +5,7 @@ OSVersion: xenial
%labels
%labels
APPLICATION_NAME mxnet-gpu
APPLICATION_NAME mxnet-gpu
APPLICATION_VERSION 1.3.
0
APPLICATION_VERSION 1.3.
1
APPLICATION_URL http://mxnet.io
APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet
SYSTEM_NAME comet
...
@@ -17,7 +17,7 @@ OSVersion: xenial
...
@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes
AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu
AUTHOR_EMAIL mkandes@sdsc.edu
LAST_UPDATED 201
81
011
LAST_UPDATED 201
9
011
5
%setup
%setup
...
@@ -274,9 +274,9 @@ OSVersion: xenial
...
@@ -274,9 +274,9 @@ OSVersion: xenial
cd /opt
cd /opt
# Download, build and install MXNet core shared library
# Download, build and install MXNet core shared library
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.
0
/apache-mxnet-src-1.3.0-incubating.tar.gz
wget https://github.com/apache/incubator-mxnet/releases/download/1.3.
1
/apache-mxnet-src-1.3.
1.rc
0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz
tar -xzvf apache-mxnet-src-1.3.
1.rc
0-incubating.tar.gz
cd /opt/apache-mxnet-src-1.3.0-incubating
cd /opt/apache-mxnet-src-1.3.
1.rc
0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_CUDA=1 USE_CUDA_PATH=/usr/local/cuda USE_CUDNN=1 USE_DIST_KVSTORE=1
make USE_OPENCV=1 USE_BLAS=openblas USE_CUDA=1 USE_CUDA_PATH=/usr/local/cuda USE_CUDNN=1 USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings
# Install MXNet python(2) bindings
...
@@ -285,7 +285,7 @@ OSVersion: xenial
...
@@ -285,7 +285,7 @@ OSVersion: xenial
apt-get -y install python-pip
apt-get -y install python-pip
apt-get -y install libgfortran3
apt-get -y install libgfortran3
cd /opt/apache-mxnet-src-1.3.0-incubating/python
cd /opt/apache-mxnet-src-1.3.
1.rc
0-incubating/python
python setup.py install
python setup.py install
# Install common python packages for data science and machine learning applications
# Install common python packages for data science and machine learning applications
...
@@ -300,7 +300,6 @@ OSVersion: xenial
...
@@ -300,7 +300,6 @@ OSVersion: xenial
apt-get -y install python-mlpy
apt-get -y install python-mlpy
apt-get -y install python-nltk
apt-get -y install python-nltk
apt-get -y install python-statsmodels
apt-get -y install python-statsmodels
apt-get -y install libopencv-dev
apt-get -y install python-opencv
apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences
# Install common python packages for the biological and biomedical sciences
...
@@ -315,6 +314,7 @@ OSVersion: xenial
...
@@ -315,6 +314,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools
apt-get -y install python3-setuptools
apt-get -y install python3-pip
apt-get -y install python3-pip
python3 setup.py clean --all
python3 setup.py install
python3 setup.py install
# Install common python3 packages for data science and machine learning applications
# Install common python3 packages for data science and machine learning applications
...
...
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