From b68406f4f995e42c8abea895f8a48cf1c2f7192e Mon Sep 17 00:00:00 2001
From: Marty Kandes <mkandes@sdsc.edu>
Date: Tue, 15 Jan 2019 15:04:30 -0800
Subject: [PATCH] naked-singularity-v0.6.2 :: updated mxnet-cpu.def and
mxnet-gpu.def for comet to MXNet v1.3.1
---
README | 4 ++--
definition-files/comet/mxnet/mxnet-cpu.def | 14 +++++++-------
definition-files/comet/mxnet/mxnet-gpu.def | 14 +++++++-------
3 files changed, 16 insertions(+), 16 deletions(-)
diff --git a/README b/README
index 2c604cf..bf4c793 100644
--- a/README
+++ b/README
@@ -46,8 +46,8 @@ AUTHOR
VERSION
- 0.6.1
+ 0.6.2
LAST UPDATED
- Monday, January 14th, 2019
+ Tuesday, January 15th, 2019
diff --git a/definition-files/comet/mxnet/mxnet-cpu.def b/definition-files/comet/mxnet/mxnet-cpu.def
index 3c254a6..4ac849a 100644
--- a/definition-files/comet/mxnet/mxnet-cpu.def
+++ b/definition-files/comet/mxnet/mxnet-cpu.def
@@ -5,7 +5,7 @@ OSVersion: xenial
%labels
APPLICATION_NAME mxnet-cpu
- APPLICATION_VERSION 1.3.0
+ APPLICATION_VERSION 1.3.1
APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet
@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu
- LAST_UPDATED 20181011
+ LAST_UPDATED 20190115
%setup
@@ -97,9 +97,9 @@ OSVersion: xenial
cd /opt
# Download, build and install MXNet core shared library
- wget https://github.com/apache/incubator-mxnet/releases/download/1.3.0/apache-mxnet-src-1.3.0-incubating.tar.gz
- tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz
- cd /opt/apache-mxnet-src-1.3.0-incubating
+ wget https://github.com/apache/incubator-mxnet/releases/download/1.3.1/apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
+ tar -xzvf apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
+ cd /opt/apache-mxnet-src-1.3.1.rc0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings
@@ -108,7 +108,7 @@ OSVersion: xenial
apt-get -y install python-pip
apt-get -y install libgfortran3
- cd /opt/apache-mxnet-src-1.3.0-incubating/python
+ cd /opt/apache-mxnet-src-1.3.1.rc0-incubating/python
python setup.py install
# Install common python packages for data science and machine learning applications
@@ -123,7 +123,6 @@ OSVersion: xenial
apt-get -y install python-mlpy
apt-get -y install python-nltk
apt-get -y install python-statsmodels
- apt-get -y install libopencv-dev
apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences
@@ -138,6 +137,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools
apt-get -y install python3-pip
+ python3 setup.py clean --all
python3 setup.py install
# Install common python3 packages for data science and machine learning applications
diff --git a/definition-files/comet/mxnet/mxnet-gpu.def b/definition-files/comet/mxnet/mxnet-gpu.def
index c436f41..ea2d529 100644
--- a/definition-files/comet/mxnet/mxnet-gpu.def
+++ b/definition-files/comet/mxnet/mxnet-gpu.def
@@ -5,7 +5,7 @@ OSVersion: xenial
%labels
APPLICATION_NAME mxnet-gpu
- APPLICATION_VERSION 1.3.0
+ APPLICATION_VERSION 1.3.1
APPLICATION_URL http://mxnet.io
SYSTEM_NAME comet
@@ -17,7 +17,7 @@ OSVersion: xenial
AUTHOR_NAME Marty Kandes
AUTHOR_EMAIL mkandes@sdsc.edu
- LAST_UPDATED 20181011
+ LAST_UPDATED 20190115
%setup
@@ -274,9 +274,9 @@ OSVersion: xenial
cd /opt
# Download, build and install MXNet core shared library
- wget https://github.com/apache/incubator-mxnet/releases/download/1.3.0/apache-mxnet-src-1.3.0-incubating.tar.gz
- tar -xzvf apache-mxnet-src-1.3.0-incubating.tar.gz
- cd /opt/apache-mxnet-src-1.3.0-incubating
+ wget https://github.com/apache/incubator-mxnet/releases/download/1.3.1/apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
+ tar -xzvf apache-mxnet-src-1.3.1.rc0-incubating.tar.gz
+ cd /opt/apache-mxnet-src-1.3.1.rc0-incubating
make USE_OPENCV=1 USE_BLAS=openblas USE_CUDA=1 USE_CUDA_PATH=/usr/local/cuda USE_CUDNN=1 USE_DIST_KVSTORE=1
# Install MXNet python(2) bindings
@@ -285,7 +285,7 @@ OSVersion: xenial
apt-get -y install python-pip
apt-get -y install libgfortran3
- cd /opt/apache-mxnet-src-1.3.0-incubating/python
+ cd /opt/apache-mxnet-src-1.3.1.rc0-incubating/python
python setup.py install
# Install common python packages for data science and machine learning applications
@@ -300,7 +300,6 @@ OSVersion: xenial
apt-get -y install python-mlpy
apt-get -y install python-nltk
apt-get -y install python-statsmodels
- apt-get -y install libopencv-dev
apt-get -y install python-opencv
# Install common python packages for the biological and biomedical sciences
@@ -315,6 +314,7 @@ OSVersion: xenial
apt-get -y install python3-setuptools
apt-get -y install python3-pip
+ python3 setup.py clean --all
python3 setup.py install
# Install common python3 packages for data science and machine learning applications
--
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