Large update of Sphinx doc; moved Sphinx source to dev dir; Cleaned control files

documentation/Sphinx/build/doctrees/API.doctree

documentation/Sphinx/build/doctrees/api.doctree

documentation/Sphinx/build/doctrees/code.doctree

documentation/Sphinx/build/doctrees/downloads.doctree

...entation/Sphinx/build/doctrees/downloads/git_repo.doctree

...n/Sphinx/build/doctrees/downloads/history_changes.doctree

...ntation/Sphinx/build/doctrees/downloads/tar_balls.doctree

documentation/Sphinx/build/doctrees/environment.pickle

documentation/Sphinx/build/doctrees/index.doctree

documentation/Sphinx/build/doctrees/index2.doctree

documentation/Sphinx/build/doctrees/installation.doctree

...ion/Sphinx/build/doctrees/installation/oper_modes.doctree

...n/Sphinx/build/doctrees/installation/requirements.doctree

...n/Sphinx/build/doctrees/installation/test_install.doctree

documentation/Sphinx/build/doctrees/oper_modes.doctree

...mentation/Sphinx/build/doctrees/program_structure.doctree

.../build/doctrees/program_structure/prog_components.doctree

...Sphinx/build/doctrees/program_structure/prog_flow.doctree

...nx/build/doctrees/program_structure/prog_overview.doctree

documentation/Sphinx/build/doctrees/requirements.doctree