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-# Sphinx build info version 1
-# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 02e87e48403e699e19326e64e41ebe7d
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-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
-<head>
- <meta charset="utf-8">
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- <meta name="viewport" content="width=device-width, initial-scale=1.0">
-
- <title>Auto Generated Documentation — flex_extract 7.1 alpha documentation</title>
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- <link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
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- <link rel="search" title="Search" href="search.html" />
- <link rel="prev" title="Usage" href="usage.html" />
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- 7.1
- </div>
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- <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
- <input type="text" name="q" placeholder="Search docs" />
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-<ul class="current">
-<li class="toctree-l1"><a class="reference internal" href="requirements.html">Requirements</a></li>
-<li class="toctree-l1"><a class="reference internal" href="installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="usage.html">Usage</a></li>
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- <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
- <div itemprop="articleBody">
-
- <div class="section" id="module-disaggregation">
-<span id="auto-generated-documentation"></span><h1>Auto Generated Documentation<a class="headerlink" href="#module-disaggregation" title="Permalink to this headline">¶</a></h1>
-<dl class="function">
-<dt id="disaggregation.IA3">
-<code class="descclassname">disaggregation.</code><code class="descname">IA3</code><span class="sig-paren">(</span><em>g</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#IA3"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.IA3" title="Permalink to this definition">¶</a></dt>
-<dd><p>Interpolation with a non-negative geometric mean based algorithm.</p>
-<p>The original grid is reconstructed by adding two sampling points in each
-data series interval. This subgrid is used to keep all information during
-the interpolation within the associated interval. Additionally, an advanced
-monotonicity filter is applied to improve the monotonicity properties of
-the series.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p>Copyright 2017
-Sabine Hittmeir, Anne Philipp, Petra Seibert</p>
-<p class="last">This work is licensed under the Creative Commons Attribution 4.0
-International License. To view a copy of this license, visit
-<a class="reference external" href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</a> or send a letter to
-Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>g</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – Complete data series that will be interpolated having
-the dimension of the original raw series.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>f</strong> – The interpolated data series with additional subgrid points.
-Its dimension is equal to the length of the input data series
-times three.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<p class="rubric">References</p>
-<p>For more information see article:
-Hittmeir, S.; Philipp, A.; Seibert, P. (2017): A conservative
-interpolation scheme for extensive quantities with application to the
-Lagrangian particle dispersion model FLEXPART.,
-Geoscientific Model Development</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.dapoly">
-<code class="descclassname">disaggregation.</code><code class="descname">dapoly</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#dapoly"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.dapoly" title="Permalink to this definition">¶</a></dt>
-<dd><p>Cubic polynomial interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG field
-using a cubic polynomial solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which
-generates a new, disaggregated value which is output at the
-central point of the 4 accumulation timespans.
-This new point is used for linear interpolation of the complete
-timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.darain">
-<code class="descclassname">disaggregation.</code><code class="descname">darain</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#darain"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.darain" title="Permalink to this definition">¶</a></dt>
-<dd><p>Linear interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG rainfall
-field using a modified linear solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which generates
-a new, disaggregated value which is output at the central point
-of the 4 accumulation timespans. This new point is used for linear
-interpolation of the complete timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
-</div>
-
-
- </div>
-
- </div>
- <footer>
-
- <div class="rst-footer-buttons" role="navigation" aria-label="footer navigation">
-
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- URL_ROOT:'./',
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-<map id="inheritance733d130bee" name="inheritance733d130bee">
-<area shape="rect" id="node1" title="Class to retrieve FLEXPART specific ECMWF data." alt="" coords="7,5,177,33"/>
-</map>
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-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
-<head>
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- <title>ControlFile — flex_extract 7.1 alpha documentation</title>
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- <link rel="stylesheet" href="../_static/css/theme.css" type="text/css" />
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- 7.1
- </div>
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- <p class="caption"><span class="caption-text">Table of Contents:</span></p>
-<ul>
-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../user_guide.html">User Guide</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../api.html">Auto Generated Documentation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../support.html">Support</a></li>
-</ul>
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- <li><a href="index.html">Module code</a> »</li>
-
- <li>ControlFile</li>
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-</div>
- <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
- <div itemprop="articleBody">
-
- <h1>Source code for ControlFile</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Leopold Haimberger (University of Vienna)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: November 2015</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - applied some minor modifications in programming style/structure</span>
-<span class="c1"># - changed name of class Control to ControlFile for more</span>
-<span class="c1"># self-explanation naming</span>
-<span class="c1"># - outsource of class ControlFile</span>
-<span class="c1"># - initialisation of class attributes ( to avoid high number of</span>
-<span class="c1"># conditional statements and set default values )</span>
-<span class="c1"># - divided assignment of attributes and the check of conditions</span>
-<span class="c1"># - outsourced the commandline argument assignments to control attributes</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Methods:</span>
-<span class="c1"># __init__</span>
-<span class="c1"># _read_controlfile</span>
-<span class="c1"># __str__</span>
-<span class="c1"># assign_args_to_control</span>
-<span class="c1"># assign_envs_to_control</span>
-<span class="c1"># check_conditions</span>
-<span class="c1"># check_install_conditions</span>
-<span class="c1"># to_list</span>
-<span class="c1">#*******************************************************************************</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">re</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">inspect</span>
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">'../'</span><span class="p">)</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">mods.tools</span> <span class="k">import</span> <span class="n">my_error</span><span class="p">,</span> <span class="n">silent_remove</span>
-<span class="kn">from</span> <span class="nn">mods.checks</span> <span class="k">import</span> <span class="p">(</span><span class="n">check_grid</span><span class="p">,</span> <span class="n">check_area</span><span class="p">,</span> <span class="n">check_levels</span><span class="p">,</span> <span class="n">check_purefc</span><span class="p">,</span>
- <span class="n">check_step</span><span class="p">,</span> <span class="n">check_mail</span><span class="p">,</span> <span class="n">check_queue</span><span class="p">,</span> <span class="n">check_pathes</span><span class="p">,</span>
- <span class="n">check_dates</span><span class="p">,</span> <span class="n">check_maxstep</span><span class="p">,</span> <span class="n">check_type</span><span class="p">,</span> <span class="n">check_request</span><span class="p">,</span>
- <span class="n">check_basetime</span><span class="p">,</span> <span class="n">check_public</span><span class="p">,</span> <span class="n">check_acctype</span><span class="p">,</span>
- <span class="n">check_acctime</span><span class="p">,</span> <span class="n">check_accmaxstep</span><span class="p">,</span> <span class="n">check_time</span><span class="p">,</span>
- <span class="n">check_logicals_type</span><span class="p">,</span> <span class="n">check_len_type_time_step</span><span class="p">,</span>
- <span class="n">check_addpar</span><span class="p">,</span> <span class="n">check_job_chunk</span><span class="p">,</span> <span class="n">check_number</span><span class="p">)</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="ControlFile"><a class="viewcode-back" href="../api.html#ControlFile.ControlFile">[docs]</a><span class="k">class</span> <span class="nc">ControlFile</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''</span>
-<span class="sd"> Contains the information which are stored in the CONTROL files.</span>
-
-<span class="sd"> The CONTROL file is the steering part of the FLEXPART extraction</span>
-<span class="sd"> software. All necessary parameters needed to retrieve the data fields</span>
-<span class="sd"> from the MARS archive for driving FLEXPART are set in a CONTROL file.</span>
-<span class="sd"> Some specific parameters like the start and end dates can be overwritten</span>
-<span class="sd"> by the command line parameters, but in generel all parameters needed</span>
-<span class="sd"> for a complete set of fields for FLEXPART can be set in the CONTROL file.</span>
-
-<span class="sd"> Attributes</span>
-<span class="sd"> ----------</span>
-<span class="sd"> controlfile : str</span>
-<span class="sd"> The name of the control file to be processed. Default value is the</span>
-<span class="sd"> filename passed to the init function when initialised.</span>
-
-<span class="sd"> start_date : str</span>
-<span class="sd"> The first day of the retrieval period. Default value is None.</span>
-
-<span class="sd"> end_date :str</span>
-<span class="sd"> The last day of the retrieval period. Default value is None.</span>
-
-<span class="sd"> date_chunk : int</span>
-<span class="sd"> Length of period for a single mars retrieval. Default value is 3.</span>
-
-<span class="sd"> dtime :str</span>
-<span class="sd"> The time step in hours. Default value is None.</span>
-
-<span class="sd"> basetime : int</span>
-<span class="sd"> The time for a half day retrieval. The 12 hours upfront are to be</span>
-<span class="sd"> retrieved. Default value is None.</span>
-
-<span class="sd"> maxstep : int</span>
-<span class="sd"> The maximum forecast step for non flux data. Default value is None.</span>
-
-<span class="sd"> type : list of str</span>
-<span class="sd"> List of field type per retrieving hour. Default value is None.</span>
-
-<span class="sd"> time : list of str</span>
-<span class="sd"> List of retrieving times in hours. Default valuer is None.</span>
-
-<span class="sd"> step : list of str or str</span>
-<span class="sd"> List of forecast time steps in hours for non flux data.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> acctype : str</span>
-<span class="sd"> The field type for the accumulated forecast fields.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> acctime : str</span>
-<span class="sd"> The starting time of the accumulated forecasts. Default value is None.</span>
-
-<span class="sd"> accmaxstep : int</span>
-<span class="sd"> The maximum forecast step for the accumulated forecast fields</span>
-<span class="sd"> (flux data). Default value is None.</span>
-
-<span class="sd"> marsclass : str</span>
-<span class="sd"> Characterisation of dataset. Default value is None.</span>
-
-<span class="sd"> dataset : str</span>
-<span class="sd"> For public datasets there is the specific naming and parameter</span>
-<span class="sd"> dataset which has to be used to characterize the type of</span>
-<span class="sd"> data. Default value is None.</span>
-
-<span class="sd"> stream : str</span>
-<span class="sd"> Identifies the forecasting system used to generate the data.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> number : str</span>
-<span class="sd"> Selects the member in ensemble forecast run. Default value is 'OFF'.</span>
-
-<span class="sd"> expver : str</span>
-<span class="sd"> The version number of the dataset. Default value is '1'.</span>
-
-<span class="sd"> gaussian : str</span>
-<span class="sd"> This parameter is deprecated and should no longer be used.</span>
-<span class="sd"> Specifies the desired type of Gaussian grid for the output.</span>
-<span class="sd"> Default value is an empty string ''.</span>
-
-<span class="sd"> grid : str</span>
-<span class="sd"> Specifies the output grid which can be either a Gaussian grid</span>
-<span class="sd"> or a Latitude/Longitude grid. Default value is None.</span>
-
-<span class="sd"> area : str</span>
-<span class="sd"> Specifies the desired sub-area of data to be extracted.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> left : str</span>
-<span class="sd"> The western most longitude of the area to be extracted.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> lower : str</span>
-<span class="sd"> The southern most latitude of the area to be extracted.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> upper : str</span>
-<span class="sd"> The northern most latitued of the area to be extracted.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> right : str</span>
-<span class="sd"> The eastern most longitude of the area to be extracted.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> level : str</span>
-<span class="sd"> Specifies the maximum level. Default value is None.</span>
-
-<span class="sd"> levelist : str</span>
-<span class="sd"> Specifies the required level list. Default value is None.</span>
-
-<span class="sd"> resol : str</span>
-<span class="sd"> Specifies the desired triangular truncation of retrieved data,</span>
-<span class="sd"> before carrying out any other selected post-processing.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> gauss : int</span>
-<span class="sd"> Switch to select gaussian fields (1) or regular lat/lon (0).</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> accuracy : int</span>
-<span class="sd"> Specifies the number of bits per value to be used in the</span>
-<span class="sd"> generated GRIB coded fields. Default value is 24.</span>
-
-<span class="sd"> omega : int</span>
-<span class="sd"> Switch to select omega retrieval (1) or not (0). Default value is 0.</span>
-
-<span class="sd"> omegadiff : int</span>
-<span class="sd"> Switch to decide to calculate Omega and Dps/Dt from continuity</span>
-<span class="sd"> equation for diagnostic purposes (1) or not (0). Default value is 0.</span>
-
-<span class="sd"> eta : int</span>
-<span class="sd"> Switch to select direct retrieval of etadot from MARS (1) or</span>
-<span class="sd"> wether it has to be calculated (0). Then Default value is 0.</span>
-
-<span class="sd"> etadiff : int</span>
-<span class="sd"> Switch to select calculation of etadot and Dps/Dt from continuity</span>
-<span class="sd"> equation for diagnostic purposes (1) or not (0). Default value is 0.</span>
-
-<span class="sd"> etapar : int</span>
-<span class="sd"> GRIB parameter Id for etadot fields. Default value is 77.</span>
-
-<span class="sd"> dpdeta : int</span>
-<span class="sd"> Switch to select multiplication of etadot with dpdeta.</span>
-<span class="sd"> Default value is 1.</span>
-
-<span class="sd"> smooth : int</span>
-<span class="sd"> Spectral truncation of ETADOT after calculation on Gaussian grid.</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> format : str</span>
-<span class="sd"> The format of the GRIB data. Default value is 'GRIB1'.</span>
-
-<span class="sd"> addpar : str</span>
-<span class="sd"> List of additional surface level ECMWF parameter to be retrieved.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> prefix : str</span>
-<span class="sd"> Prefix string for the final FLEXPART/FLEXTRA ready input files.</span>
-<span class="sd"> Default value is 'EN'.</span>
-
-<span class="sd"> cwc : int</span>
-<span class="sd"> Switch to select wether the sum of cloud liquid water content and</span>
-<span class="sd"> cloud ice water content should be retrieved. Default value is 0.</span>
-
-<span class="sd"> wrf : int</span>
-<span class="sd"> Switch to select further parameters for retrievment to support</span>
-<span class="sd"> WRF simulations. Default value is 0.</span>
-
-<span class="sd"> ecfsdir : str</span>
-<span class="sd"> Path to the ECMWF storage 'ectmp:/${USER}/econdemand/'</span>
-
-<span class="sd"> mailfail : list of str</span>
-<span class="sd"> Email list for sending error log files from ECMWF servers.</span>
-<span class="sd"> The email addresses should be seperated by a comma.</span>
-<span class="sd"> Default value is ['${USER}'].</span>
-
-<span class="sd"> mailops : list of str</span>
-<span class="sd"> Email list for sending operational log files from ECMWF servers.</span>
-<span class="sd"> The email addresses should be seperated by a comma.</span>
-<span class="sd"> Default value is ['${USER}'].</span>
-
-<span class="sd"> grib2flexpart : int 0</span>
-<span class="sd"> Switch to select generation of preprocessed FLEXPART files ".fp".</span>
-<span class="sd"> If it is selected, the program grib2flexpart will try</span>
-<span class="sd"> to convert the flex_extract output files into ".fp" format.</span>
-
-<span class="sd"> ecstorage : int</span>
-<span class="sd"> Switch to select storage of FLEXPART ready output files</span>
-<span class="sd"> in the ECFS file system. Default value is 0.</span>
-
-<span class="sd"> ectrans : int</span>
-<span class="sd"> Switch to select the transfer of FLEXPART ready output files</span>
-<span class="sd"> to the gateway server. Default value is 0.</span>
-
-<span class="sd"> inputdir : str</span>
-<span class="sd"> Path to the temporary directory for the retrieval grib files and</span>
-<span class="sd"> other processing files. Default value is _config.PATH_INPUT_DIR.</span>
-
-<span class="sd"> outputdir : str</span>
-<span class="sd"> Path to the final directory where the final FLEXPART ready input</span>
-<span class="sd"> files are stored. Default value is None.</span>
-
-<span class="sd"> flexextractdir : str</span>
-<span class="sd"> Path to the flex_extract root directory. Default value is</span>
-<span class="sd"> _config.PATH_FLEXEXTRACT_DIR.</span>
-
-<span class="sd"> exedir : str</span>
-<span class="sd"> Path to the FORTRAN executable file. Default value is</span>
-<span class="sd"> _config.PATH_FORTRAN_SRC.</span>
-
-<span class="sd"> flexpartdir : str</span>
-<span class="sd"> Path to a FLEXPART root directory. Default value is None.</span>
-
-<span class="sd"> makefile : str</span>
-<span class="sd"> Name of the makefile to be used for the Fortran program.</span>
-<span class="sd"> Default value is 'Makefile.gfortran'.</span>
-
-<span class="sd"> destination : str</span>
-<span class="sd"> The remote destination which is used to transfer files</span>
-<span class="sd"> from ECMWF server to local gateway server. Default value is None.</span>
-
-<span class="sd"> gateway : str</span>
-<span class="sd"> The gateway server the user is using. Default value is None.</span>
-
-<span class="sd"> ecuid : str</span>
-<span class="sd"> The user id on ECMWF server. Default value is None.</span>
-
-<span class="sd"> ecgid : str</span>
-<span class="sd"> The group id on ECMWF server. Default value is None.</span>
-
-<span class="sd"> install_target : str</span>
-<span class="sd"> Defines the location where the installation is to be done.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> debug : int</span>
-<span class="sd"> Switch to keep temporary files at the end of postprocessing (1) or</span>
-<span class="sd"> to delete all temporary files except the final output files (0).</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> oper : int</span>
-<span class="sd"> Switch to prepare the operational job script. Start date, end date and</span>
-<span class="sd"> basetime will be prepared with environment variables.</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> request : int</span>
-<span class="sd"> Switch to select between just retrieving the data (0), writing the mars</span>
-<span class="sd"> parameter values to a csv file (1) or doing both (2).</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> public : int</span>
-<span class="sd"> Switch to select kind of ECMWF Web Api access and the</span>
-<span class="sd"> possible data sets. Public data sets (1) and Memberstate data sets (0).</span>
-<span class="sd"> Default value is 0.</span>
-
-<span class="sd"> ec_api : boolean</span>
-<span class="sd"> Tells wether the ECMWF Web API was able to load or not.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> cds_api : boolean</span>
-<span class="sd"> Tells wether the CDS API was able to load or not.</span>
-<span class="sd"> Default value is None.</span>
-
-<span class="sd"> purefc : int</span>
-<span class="sd"> Switch to decide wether the job is a pure forecast retrieval or</span>
-<span class="sd"> coupled with analysis data. Default value is 0.</span>
-
-<span class="sd"> rrint: int</span>
-<span class="sd"> Switch to select between old precipitation disaggregation method (0)</span>
-<span class="sd"> or the new IA3 disaggegration method (1). Default value is 0.</span>
-
-<span class="sd"> logicals : list of str</span>
-<span class="sd"> List of the names of logical switches which controls the flow</span>
-<span class="sd"> of the program. Default list is ['gauss', 'omega', 'omegadiff', 'eta',</span>
-<span class="sd"> 'etadiff', 'dpdeta', 'cwc', 'wrf', 'grib2flexpart', 'ecstorage',</span>
-<span class="sd"> 'ectrans', 'debug', 'request', 'public', 'purefc', 'rrint']</span>
-<span class="sd"> '''</span>
-
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">filename</span><span class="p">):</span>
- <span class="sd">'''Initialises the instance of ControlFile class and defines</span>
-<span class="sd"> all class attributes with default values. Afterwards calls</span>
-<span class="sd"> function __read_controlfile__ to read parameter from Control file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filename : str</span>
-<span class="sd"> Name of CONTROL file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="c1"># list of all possible class attributes and their default values</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">controlfile</span> <span class="o">=</span> <span class="n">filename</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">start_date</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">end_date</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">date_chunk</span> <span class="o">=</span> <span class="mi">3</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">job_chunk</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dtime</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">maxstep</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">type</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">time</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">step</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">acctype</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">acctime</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accmaxstep</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dataset</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">stream</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">number</span> <span class="o">=</span> <span class="s1">'OFF'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">expver</span> <span class="o">=</span> <span class="s1">'1'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">gaussian</span> <span class="o">=</span> <span class="s1">''</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">grid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">area</span> <span class="o">=</span> <span class="s1">''</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">left</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">lower</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">upper</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">right</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">level</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">levelist</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">resol</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">gauss</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accuracy</span> <span class="o">=</span> <span class="mi">24</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">omega</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">omegadiff</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">eta</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">etadiff</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">etapar</span> <span class="o">=</span> <span class="mi">77</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dpdeta</span> <span class="o">=</span> <span class="mi">1</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">smooth</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">format</span> <span class="o">=</span> <span class="s1">'GRIB1'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">addpar</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">prefix</span> <span class="o">=</span> <span class="s1">'EN'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">cwc</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">wrf</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ecfsdir</span> <span class="o">=</span> <span class="s1">'ectmp:/$</span><span class="si">{USER}</span><span class="s1">/econdemand/'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">mailfail</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'$</span><span class="si">{USER}</span><span class="s1">'</span><span class="p">]</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">mailops</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'$</span><span class="si">{USER}</span><span class="s1">'</span><span class="p">]</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">grib2flexpart</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ecstorage</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ectrans</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_INPUT_DIR</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputdir</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">flexextractdir</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FLEXEXTRACT_DIR</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">exedir</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FORTRAN_SRC</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">makefile</span> <span class="o">=</span> <span class="s1">'Makefile.gfortran'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">destination</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">gateway</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ecuid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ecgid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">install_target</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">debug</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">oper</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">request</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">public</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ec_api</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">cds_api</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">rrint</span> <span class="o">=</span> <span class="mi">0</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">logicals</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'gauss'</span><span class="p">,</span> <span class="s1">'omega'</span><span class="p">,</span> <span class="s1">'omegadiff'</span><span class="p">,</span> <span class="s1">'eta'</span><span class="p">,</span> <span class="s1">'etadiff'</span><span class="p">,</span>
- <span class="s1">'dpdeta'</span><span class="p">,</span> <span class="s1">'cwc'</span><span class="p">,</span> <span class="s1">'wrf'</span><span class="p">,</span> <span class="s1">'grib2flexpart'</span><span class="p">,</span> <span class="s1">'ecstorage'</span><span class="p">,</span>
- <span class="s1">'ectrans'</span><span class="p">,</span> <span class="s1">'debug'</span><span class="p">,</span> <span class="s1">'oper'</span><span class="p">,</span> <span class="s1">'request'</span><span class="p">,</span> <span class="s1">'public'</span><span class="p">,</span>
- <span class="s1">'purefc'</span><span class="p">,</span> <span class="s1">'rrint'</span><span class="p">]</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">_read_controlfile</span><span class="p">()</span>
-
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">_read_controlfile</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Read CONTROL file and assign all CONTROL file variables.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">cfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_CONTROLFILES</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">controlfile</span><span class="p">)</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">cfile</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">fdata</span> <span class="o">=</span> <span class="n">f</span><span class="o">.</span><span class="n">read</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">IOError</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Could not read CONTROL file "'</span> <span class="o">+</span> <span class="n">cfile</span> <span class="o">+</span> <span class="s1">'"'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Either it does not exist or its syntax is wrong.'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Try "'</span> <span class="o">+</span> <span class="n">sys</span><span class="o">.</span><span class="n">argv</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> \
- <span class="s1">' -h" to print usage information'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="c1"># go through every line and store parameter</span>
- <span class="k">for</span> <span class="n">ldata</span> <span class="ow">in</span> <span class="n">fdata</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">ldata</span> <span class="ow">and</span> <span class="n">ldata</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'#'</span><span class="p">:</span>
- <span class="c1"># ignore comment line in control file</span>
- <span class="k">continue</span>
- <span class="k">if</span> <span class="s1">'#'</span> <span class="ow">in</span> <span class="n">ldata</span><span class="p">:</span>
- <span class="c1"># cut off comment</span>
- <span class="n">ldata</span> <span class="o">=</span> <span class="n">ldata</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'#'</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="n">data</span> <span class="o">=</span> <span class="n">ldata</span><span class="o">.</span><span class="n">split</span><span class="p">()</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">1</span><span class="p">:</span>
- <span class="k">if</span> <span class="s1">'m_'</span> <span class="ow">in</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">():</span>
- <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">][</span><span class="mi">2</span><span class="p">:]</span>
- <span class="k">if</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'class'</span><span class="p">:</span>
- <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'marsclass'</span>
- <span class="k">if</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'day1'</span><span class="p">:</span>
- <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'start_date'</span>
- <span class="k">if</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'day2'</span><span class="p">:</span>
- <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'end_date'</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="k">if</span> <span class="s1">'$'</span> <span class="ow">in</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">(),</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
- <span class="k">while</span> <span class="s1">'$'</span> <span class="ow">in</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
- <span class="n">i</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="s1">'$'</span><span class="p">)</span>
- <span class="n">j</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">find</span><span class="p">(</span><span class="s1">'{'</span><span class="p">)</span>
- <span class="n">k</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">find</span><span class="p">(</span><span class="s1">'}'</span><span class="p">)</span>
- <span class="n">var</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">getenv</span><span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">][</span><span class="n">j</span><span class="o">+</span><span class="mi">1</span><span class="p">:</span><span class="n">k</span><span class="p">])</span>
- <span class="k">if</span> <span class="n">var</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">][:</span><span class="n">i</span><span class="p">]</span> <span class="o">+</span> <span class="n">var</span> <span class="o">+</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">][</span><span class="n">k</span><span class="o">+</span><span class="mi">1</span><span class="p">:]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">my_error</span><span class="p">(</span><span class="s1">'Could not find variable '</span>
- <span class="o">+</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">][</span><span class="n">j</span><span class="o">+</span><span class="mi">1</span><span class="p">:</span><span class="n">k</span><span class="p">]</span> <span class="o">+</span> <span class="s1">' while reading '</span> <span class="o">+</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">controlfile</span><span class="p">)</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">+</span> <span class="s1">'_expanded'</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">!=</span> <span class="s1">'none'</span><span class="p">:</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">(),</span> <span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">(),</span> <span class="kc">None</span><span class="p">)</span>
- <span class="k">elif</span> <span class="nb">len</span><span class="p">(</span><span class="n">data</span><span class="p">)</span> <span class="o">></span> <span class="mi">2</span><span class="p">:</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">lower</span><span class="p">(),</span> <span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">:]))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">pass</span>
-
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">__str__</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Prepares a string which have all the ControlFile class attributes</span>
-<span class="sd"> with its associated values. Each attribute is printed in one line and</span>
-<span class="sd"> in alphabetical order.</span>
-
-<span class="sd"> Example</span>
-<span class="sd"> -------</span>
-<span class="sd"> 'age': 10</span>
-<span class="sd"> 'color': 'Spotted'</span>
-<span class="sd"> 'kids': 0</span>
-<span class="sd"> 'legs': 2</span>
-<span class="sd"> 'name': 'Dog'</span>
-<span class="sd"> 'smell': 'Alot'</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> string</span>
-<span class="sd"> Single string of concatenated ControlFile class attributes</span>
-<span class="sd"> with their values</span>
-<span class="sd"> '''</span>
- <span class="kn">import</span> <span class="nn">collections</span>
-
- <span class="n">attrs</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
- <span class="n">attrs</span> <span class="o">=</span> <span class="n">collections</span><span class="o">.</span><span class="n">OrderedDict</span><span class="p">(</span><span class="nb">sorted</span><span class="p">(</span><span class="n">attrs</span><span class="o">.</span><span class="n">items</span><span class="p">()))</span>
-
- <span class="k">return</span> <span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="s2">"</span><span class="si">%s</span><span class="s2">: </span><span class="si">%s</span><span class="s2">"</span> <span class="o">%</span> <span class="n">item</span> <span class="k">for</span> <span class="n">item</span> <span class="ow">in</span> <span class="n">attrs</span><span class="o">.</span><span class="n">items</span><span class="p">())</span>
-
-<div class="viewcode-block" id="ControlFile.assign_args_to_control"><a class="viewcode-back" href="../api.html#ControlFile.ControlFile.assign_args_to_control">[docs]</a> <span class="k">def</span> <span class="nf">assign_args_to_control</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">args</span><span class="p">):</span>
- <span class="sd">'''Overwrites the existing ControlFile instance attributes with</span>
-<span class="sd"> the command line arguments.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> args : Namespace</span>
-<span class="sd"> Contains the commandline arguments from script/program call.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="c1"># get dictionary of command line parameters and eliminate all</span>
- <span class="c1"># parameters which are None (were not specified)</span>
- <span class="n">args_dict</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="n">args</span><span class="p">)</span>
- <span class="n">arguments</span> <span class="o">=</span> <span class="p">{</span><span class="n">k</span> <span class="p">:</span> <span class="n">args_dict</span><span class="p">[</span><span class="n">k</span><span class="p">]</span> <span class="k">for</span> <span class="n">k</span> <span class="ow">in</span> <span class="n">args_dict</span>
- <span class="k">if</span> <span class="n">args_dict</span><span class="p">[</span><span class="n">k</span><span class="p">]</span> <span class="o">!=</span> <span class="kc">None</span><span class="p">}</span>
-
- <span class="c1"># assign all passed command line arguments to ControlFile instance</span>
- <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">arguments</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="nb">str</span><span class="p">(</span><span class="n">k</span><span class="p">),</span> <span class="n">v</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="ControlFile.assign_envs_to_control"><a class="viewcode-back" href="../api.html#ControlFile.ControlFile.assign_envs_to_control">[docs]</a> <span class="k">def</span> <span class="nf">assign_envs_to_control</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">envs</span><span class="p">):</span>
- <span class="sd">'''Assigns the ECMWF environment parameter.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> envs : dict of str</span>
-<span class="sd"> Contains the ECMWF environment parameternames "ECUID", "ECGID",</span>
-<span class="sd"> "DESTINATION" and "GATEWAY" with its corresponding values.</span>
-<span class="sd"> They were read from the file "ECMWF_ENV".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">envs</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="nb">setattr</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="nb">str</span><span class="p">(</span><span class="n">k</span><span class="p">)</span><span class="o">.</span><span class="n">lower</span><span class="p">(),</span> <span class="nb">str</span><span class="p">(</span><span class="n">v</span><span class="p">))</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="ControlFile.check_conditions"><a class="viewcode-back" href="../api.html#ControlFile.ControlFile.check_conditions">[docs]</a> <span class="k">def</span> <span class="nf">check_conditions</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">queue</span><span class="p">):</span>
- <span class="sd">'''Checks a couple of necessary attributes and conditions,</span>
-<span class="sd"> such as if they exist and contain values.</span>
-<span class="sd"> Otherwise set default values.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> queue : str</span>
-<span class="sd"> Name of the queue if submitted to the ECMWF servers.</span>
-<span class="sd"> Used to check if ecuid, ecgid, gateway and destination</span>
-<span class="sd"> are set correctly and are not empty.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">check_logicals_type</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">logicals</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">mailfail</span> <span class="o">=</span> <span class="n">check_mail</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">mailfail</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">mailops</span> <span class="o">=</span> <span class="n">check_mail</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">mailops</span><span class="p">)</span>
-
- <span class="n">check_queue</span><span class="p">(</span><span class="n">queue</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">gateway</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">destination</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">ecuid</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">ecgid</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">outputdir</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="n">check_pathes</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputdir</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">flexextractdir</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">start_date</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">end_date</span> <span class="o">=</span> <span class="n">check_dates</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">start_date</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">end_date</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">=</span> <span class="n">check_basetime</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">basetime</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">levelist</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">level</span> <span class="o">=</span> <span class="n">check_levels</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">levelist</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">level</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">step</span> <span class="o">=</span> <span class="n">check_step</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">step</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">mailfail</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">maxstep</span> <span class="o">=</span> <span class="n">check_maxstep</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">maxstep</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">step</span><span class="p">)</span>
-
- <span class="n">check_request</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">request</span><span class="p">,</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">_config</span><span class="o">.</span><span class="n">FILE_MARS_REQUESTS</span><span class="p">))</span>
-
- <span class="n">check_public</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">public</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">dataset</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">type</span> <span class="o">=</span> <span class="n">check_type</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">step</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">time</span> <span class="o">=</span> <span class="n">check_time</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">time</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">time</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">step</span> <span class="o">=</span> <span class="n">check_len_type_time_step</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">type</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">time</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">step</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">maxstep</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">acctype</span> <span class="o">=</span> <span class="n">check_acctype</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">acctype</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">type</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">acctime</span> <span class="o">=</span> <span class="n">check_acctime</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">acctime</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">accmaxstep</span> <span class="o">=</span> <span class="n">check_accmaxstep</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">accmaxstep</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">maxstep</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span> <span class="o">=</span> <span class="n">check_purefc</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">type</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">grid</span> <span class="o">=</span> <span class="n">check_grid</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">area</span> <span class="o">=</span> <span class="n">check_area</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">area</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">upper</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">lower</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">left</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">right</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">addpar</span> <span class="o">=</span> <span class="n">check_addpar</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">addpar</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">job_chunk</span> <span class="o">=</span> <span class="n">check_job_chunk</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">job_chunk</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">number</span> <span class="o">=</span> <span class="n">check_number</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">number</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">mailfail</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="ControlFile.to_list"><a class="viewcode-back" href="../api.html#ControlFile.ControlFile.to_list">[docs]</a> <span class="k">def</span> <span class="nf">to_list</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Just generates a list of strings containing the attributes and</span>
-<span class="sd"> assigned values except the attributes "_expanded", "exedir",</span>
-<span class="sd"> "flexextractdir" and "flexpartdir".</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> l : list of *</span>
-<span class="sd"> A sorted list of the all ControlFile class attributes with</span>
-<span class="sd"> their values except the attributes "_expanded", "exedir",</span>
-<span class="sd"> "flexextractdir" and "flexpartdir".</span>
-<span class="sd"> '''</span>
-
- <span class="kn">import</span> <span class="nn">collections</span>
-
- <span class="n">attrs</span> <span class="o">=</span> <span class="n">collections</span><span class="o">.</span><span class="n">OrderedDict</span><span class="p">(</span><span class="nb">sorted</span><span class="p">(</span><span class="nb">vars</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span><span class="o">.</span><span class="n">items</span><span class="p">()))</span>
-
- <span class="n">l</span> <span class="o">=</span> <span class="nb">list</span><span class="p">()</span>
-
- <span class="k">for</span> <span class="n">item</span> <span class="ow">in</span> <span class="n">attrs</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
- <span class="k">if</span> <span class="s1">'_expanded'</span> <span class="ow">in</span> <span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
- <span class="k">pass</span>
- <span class="k">elif</span> <span class="s1">'exedir'</span> <span class="ow">in</span> <span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
- <span class="k">pass</span>
- <span class="k">elif</span> <span class="s1">'flexpartdir'</span> <span class="ow">in</span> <span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
- <span class="k">pass</span>
- <span class="k">elif</span> <span class="s1">'flexextractdir'</span> <span class="ow">in</span> <span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]:</span>
- <span class="k">pass</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">item</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="nb">list</span><span class="p">):</span>
- <span class="n">stot</span> <span class="o">=</span> <span class="s1">''</span>
- <span class="k">for</span> <span class="n">s</span> <span class="ow">in</span> <span class="n">item</span><span class="p">[</span><span class="mi">1</span><span class="p">]:</span>
- <span class="n">stot</span> <span class="o">+=</span> <span class="n">s</span> <span class="o">+</span> <span class="s1">' '</span>
-
- <span class="n">l</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s2">"</span><span class="si">%s</span><span class="s2"> </span><span class="si">%s</span><span class="se">\n</span><span class="s2">"</span> <span class="o">%</span> <span class="p">(</span><span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">stot</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">l</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s2">"</span><span class="si">%s</span><span class="s2"> </span><span class="si">%s</span><span class="se">\n</span><span class="s2">"</span> <span class="o">%</span> <span class="n">item</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">l</span><span class="p">)</span></div></div>
-
-</pre></div>
-
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-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
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-
- <h1>Source code for EcFlexpart</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - extended with class Control</span>
-<span class="c1"># - removed functions mkdir_p, daterange, years_between, months_between</span>
-<span class="c1"># - added functions darain, dapoly, to_param_id, init128, normal_exit,</span>
-<span class="c1"># my_error, clean_up, install_args_and_control,</span>
-<span class="c1"># interpret_args_and_control,</span>
-<span class="c1"># - removed function __del__ in class EIFLexpart</span>
-<span class="c1"># - added the following functions in EIFlexpart:</span>
-<span class="c1"># - create_namelist</span>
-<span class="c1"># - process_output</span>
-<span class="c1"># - deacc_fluxes</span>
-<span class="c1"># - modified existing EIFlexpart - functions for the use in</span>
-<span class="c1"># flex_extract</span>
-<span class="c1"># - retrieve also longer term forecasts, not only analyses and</span>
-<span class="c1"># short term forecast data</span>
-<span class="c1"># - added conversion into GRIB2</span>
-<span class="c1"># - added conversion into .fp format for faster execution of FLEXPART</span>
-<span class="c1"># (see https://www.flexpart.eu/wiki/FpCtbtoWo4FpFormat)</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - removed function getFlexpartTime in class EcFlexpart</span>
-<span class="c1"># - outsourced class ControlFile</span>
-<span class="c1"># - outsourced class MarsRetrieval</span>
-<span class="c1"># - changed class name from EIFlexpart to EcFlexpart</span>
-<span class="c1"># - applied minor code changes (style)</span>
-<span class="c1"># - removed "dead code" , e.g. retrieval of Q since it is not needed</span>
-<span class="c1"># - removed "times" parameter from retrieve-method since it is not used</span>
-<span class="c1"># - seperated function "retrieve" into smaller functions (less code</span>
-<span class="c1"># duplication, easier testing)</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1">#pylint: disable=unsupported-assignment-operation</span>
-<span class="c1"># this is disabled because for this specific case its an error in pylint</span>
-<span class="c1">#pylint: disable=consider-using-enumerate</span>
-<span class="c1"># this is not useful in this case</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">glob</span>
-<span class="kn">import</span> <span class="nn">shutil</span>
-<span class="kn">import</span> <span class="nn">subprocess</span>
-<span class="kn">from</span> <span class="nn">datetime</span> <span class="k">import</span> <span class="n">datetime</span><span class="p">,</span> <span class="n">timedelta</span>
-<span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
-
-<span class="kn">from</span> <span class="nn">eccodes</span> <span class="k">import</span> <span class="p">(</span><span class="n">codes_index_select</span><span class="p">,</span> <span class="n">codes_new_from_index</span><span class="p">,</span> <span class="n">codes_get</span><span class="p">,</span>
- <span class="n">codes_get_values</span><span class="p">,</span> <span class="n">codes_set_values</span><span class="p">,</span> <span class="n">codes_set</span><span class="p">,</span>
- <span class="n">codes_write</span><span class="p">,</span> <span class="n">codes_release</span><span class="p">,</span> <span class="n">codes_new_from_index</span><span class="p">,</span>
- <span class="n">codes_index_release</span><span class="p">,</span> <span class="n">codes_index_get</span><span class="p">,</span> <span class="n">codes_get_array</span><span class="p">,</span>
- <span class="n">codes_set_array</span><span class="p">,</span> <span class="n">codes_grib_new_from_file</span><span class="p">)</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">'../'</span><span class="p">)</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">GribUtil</span> <span class="k">import</span> <span class="n">GribUtil</span>
-<span class="kn">from</span> <span class="nn">mods.tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">init128</span><span class="p">,</span> <span class="n">to_param_id</span><span class="p">,</span> <span class="n">silent_remove</span><span class="p">,</span> <span class="n">product</span><span class="p">,</span>
- <span class="n">my_error</span><span class="p">,</span> <span class="n">make_dir</span><span class="p">,</span> <span class="n">get_informations</span><span class="p">,</span> <span class="n">get_dimensions</span><span class="p">,</span>
- <span class="n">execute_subprocess</span><span class="p">,</span> <span class="n">to_param_id_with_tablenumber</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">MarsRetrieval</span> <span class="k">import</span> <span class="n">MarsRetrieval</span>
-<span class="kn">from</span> <span class="nn">UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
-<span class="kn">import</span> <span class="nn">mods.disaggregation</span> <span class="k">as</span> <span class="nn">disaggregation</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="EcFlexpart"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart">[docs]</a><span class="k">class</span> <span class="nc">EcFlexpart</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''</span>
-<span class="sd"> Class to represent FLEXPART specific ECMWF data.</span>
-
-<span class="sd"> FLEXPART needs grib files in a specifc format. All necessary data fields</span>
-<span class="sd"> for one time step are stored in a single file. The class represents an</span>
-<span class="sd"> instance with all the parameter and settings necessary for retrieving</span>
-<span class="sd"> MARS data and modifing them so they are fitting FLEXPART needs. The class</span>
-<span class="sd"> is able to disaggregate the fluxes and convert grid types to the one needed</span>
-<span class="sd"> by FLEXPART, therefore using the FORTRAN program.</span>
-
-<span class="sd"> Attributes</span>
-<span class="sd"> ----------</span>
-<span class="sd"> mreq_count : int</span>
-<span class="sd"> Counter for the number of generated mars requests.</span>
-
-<span class="sd"> inputdir : str</span>
-<span class="sd"> Path to the directory where the retrieved data is stored.</span>
-
-<span class="sd"> dataset : str</span>
-<span class="sd"> For public datasets there is the specific naming and parameter</span>
-<span class="sd"> dataset which has to be used to characterize the type of</span>
-<span class="sd"> data.</span>
-
-<span class="sd"> basetime : int</span>
-<span class="sd"> The time for a half day retrieval. The 12 hours upfront are to be</span>
-<span class="sd"> retrieved.</span>
-
-<span class="sd"> dtime : str</span>
-<span class="sd"> Time step in hours.</span>
-
-<span class="sd"> acctype : str</span>
-<span class="sd"> The field type for the accumulated forecast fields.</span>
-
-<span class="sd"> acctime : str</span>
-<span class="sd"> The starting time from the accumulated forecasts.</span>
-
-<span class="sd"> accmaxstep : str</span>
-<span class="sd"> The maximum forecast step for the accumulated forecast fields.</span>
-
-<span class="sd"> marsclass : str</span>
-<span class="sd"> Characterisation of dataset.</span>
-
-<span class="sd"> stream : str</span>
-<span class="sd"> Identifies the forecasting system used to generate the data.</span>
-
-<span class="sd"> number : str</span>
-<span class="sd"> Selects the member in ensemble forecast run.</span>
-
-<span class="sd"> resol : str</span>
-<span class="sd"> Specifies the desired triangular truncation of retrieved data,</span>
-<span class="sd"> before carrying out any other selected post-processing.</span>
-
-<span class="sd"> accuracy : str</span>
-<span class="sd"> Specifies the number of bits per value to be used in the</span>
-<span class="sd"> generated GRIB coded fields.</span>
-
-<span class="sd"> addpar : str</span>
-<span class="sd"> List of additional parameters to be retrieved.</span>
-
-<span class="sd"> level : str</span>
-<span class="sd"> Specifies the maximum level.</span>
-
-<span class="sd"> expver : str</span>
-<span class="sd"> The version of the dataset.</span>
-
-<span class="sd"> levelist : str</span>
-<span class="sd"> Specifies the required levels.</span>
-
-<span class="sd"> glevelist : str</span>
-<span class="sd"> Specifies the required levels for gaussian grids.</span>
-
-<span class="sd"> gaussian : str</span>
-<span class="sd"> This parameter is deprecated and should no longer be used.</span>
-<span class="sd"> Specifies the desired type of Gaussian grid for the output.</span>
-
-<span class="sd"> grid : str</span>
-<span class="sd"> Specifies the output grid which can be either a Gaussian grid</span>
-<span class="sd"> or a Latitude/Longitude grid.</span>
-
-<span class="sd"> area : str</span>
-<span class="sd"> Specifies the desired sub-area of data to be extracted.</span>
-
-<span class="sd"> purefc : int</span>
-<span class="sd"> Switch for definition of pure forecast mode or not.</span>
-
-<span class="sd"> outputfilelist : list of str</span>
-<span class="sd"> The final list of FLEXPART ready input files.</span>
-
-<span class="sd"> types : dictionary</span>
-<span class="sd"> Determines the combination of type of fields, time and forecast step</span>
-<span class="sd"> to be retrieved.</span>
-
-<span class="sd"> params : dictionary</span>
-<span class="sd"> Collection of grid types and their corresponding parameters,</span>
-<span class="sd"> levels, level types and the grid definition.</span>
-
-<span class="sd"> server : ECMWFService or ECMWFDataServer</span>
-<span class="sd"> This is the connection to the ECMWF data servers.</span>
-
-<span class="sd"> public : int</span>
-<span class="sd"> Decides which Web API Server version is used.</span>
-
-<span class="sd"> dates : str</span>
-<span class="sd"> Contains start and end date of the retrieval in the format</span>
-<span class="sd"> "YYYYMMDD/to/YYYYMMDD"</span>
-<span class="sd"> '''</span>
-
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="c1"># CLASS FUNCTIONS</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
- <span class="sd">'''Creates an object/instance of EcFlexpart with the associated</span>
-<span class="sd"> settings of its attributes for the retrieval.</span>
-
-<span class="sd"> Parameters:</span>
-<span class="sd"> -----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> fluxes : boolean, optional</span>
-<span class="sd"> Decides if the flux parameter settings are stored or</span>
-<span class="sd"> the rest of the parameter list.</span>
-<span class="sd"> Default value is False.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># set a counter for the number of generated mars requests</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">mreq_count</span> <span class="o">=</span> <span class="mi">0</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dataset</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">dataset</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dtime</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">dtime</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">acctype</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">acctype</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">acctime</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">acctime</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accmaxstep</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">accmaxstep</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">marsclass</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">stream</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">stream</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">number</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">number</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">resol</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">resol</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accuracy</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">accuracy</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">addpar</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">addpar</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">level</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">level</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">expver</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">expver</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">levelist</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">levelist</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">glevelist</span> <span class="o">=</span> <span class="s1">'1/to/'</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">level</span> <span class="c1"># in case of gaussian grid</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">gaussian</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">gaussian</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">grid</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">grid</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">area</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">area</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="c1"># Define the different types of field combinations (type, time, step)</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span> <span class="o">=</span> <span class="p">{}</span>
- <span class="c1"># Define the parameters and their level types, level list and</span>
- <span class="c1"># grid resolution for the retrieval job</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span> <span class="o">=</span> <span class="p">{}</span>
-
- <span class="k">if</span> <span class="n">fluxes</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_create_params_fluxes</span><span class="p">()</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_create_params</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">gauss</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">eta</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">omega</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">cwc</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">fluxes</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_create_field_types_fluxes</span><span class="p">()</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_create_field_types</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">time</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">step</span><span class="p">)</span>
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">_create_field_types</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">ftype</span><span class="p">,</span> <span class="n">ftime</span><span class="p">,</span> <span class="n">fstep</span><span class="p">):</span>
- <span class="sd">'''Create the combination of field type, time and forecast step.</span>
-
-<span class="sd"> Parameters:</span>
-<span class="sd"> -----------</span>
-<span class="sd"> ftype : list of str</span>
-<span class="sd"> List of field types.</span>
-
-<span class="sd"> ftime : list of str</span>
-<span class="sd"> The time in hours of the field.</span>
-
-<span class="sd"> fstep : str</span>
-<span class="sd"> Specifies the forecast time step from forecast base time.</span>
-<span class="sd"> Valid values are hours (HH) from forecast base time.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">ty</span><span class="p">,</span> <span class="n">st</span><span class="p">,</span> <span class="n">ti</span> <span class="ow">in</span> <span class="nb">zip</span><span class="p">(</span><span class="n">ftype</span><span class="p">,</span> <span class="n">fstep</span><span class="p">,</span> <span class="n">ftime</span><span class="p">):</span>
- <span class="n">btlist</span> <span class="o">=</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">ftime</span><span class="p">))</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">12</span><span class="p">:</span>
- <span class="n">btlist</span> <span class="o">=</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">,</span> <span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">,</span> <span class="mi">7</span><span class="p">,</span> <span class="mi">8</span><span class="p">,</span> <span class="mi">9</span><span class="p">,</span> <span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mi">12</span><span class="p">]</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">btlist</span> <span class="o">=</span> <span class="p">[</span><span class="mi">13</span><span class="p">,</span> <span class="mi">14</span><span class="p">,</span> <span class="mi">15</span><span class="p">,</span> <span class="mi">16</span><span class="p">,</span> <span class="mi">17</span><span class="p">,</span> <span class="mi">18</span><span class="p">,</span> <span class="mi">19</span><span class="p">,</span> <span class="mi">20</span><span class="p">,</span> <span class="mi">21</span><span class="p">,</span> <span class="mi">22</span><span class="p">,</span> <span class="mi">23</span><span class="p">,</span> <span class="mi">0</span><span class="p">]</span>
-
- <span class="c1"># if ((ty.upper() == 'AN' and (int(c.time[i]) % int(c.dtime)) == 0) or</span>
- <span class="c1"># (ty.upper() != 'AN' and (int(c.step[i]) % int(c.dtime)) == 0 and</span>
- <span class="c1"># (int(c.step[i]) % int(c.dtime) == 0)) ) and \</span>
- <span class="c1"># (int(c.time[i]) in btlist or c.purefc):</span>
-
- <span class="k">if</span> <span class="p">(</span><span class="n">i</span> <span class="ow">in</span> <span class="n">btlist</span><span class="p">)</span> <span class="ow">or</span> <span class="bp">self</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
-
- <span class="k">if</span> <span class="p">((</span><span class="n">ty</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'AN'</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">ti</span><span class="p">)</span> <span class="o">%</span> <span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span> <span class="o">==</span> <span class="mi">0</span><span class="p">)</span> <span class="ow">or</span>
- <span class="p">(</span><span class="n">ty</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">!=</span> <span class="s1">'AN'</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">st</span><span class="p">)</span> <span class="o">%</span> <span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span> <span class="o">==</span> <span class="mi">0</span><span class="p">)):</span>
-
- <span class="k">if</span> <span class="n">ty</span> <span class="ow">not</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="o">.</span><span class="n">keys</span><span class="p">():</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">]</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'times'</span><span class="p">:</span> <span class="s1">''</span><span class="p">,</span> <span class="s1">'steps'</span><span class="p">:</span> <span class="s1">''</span><span class="p">}</span>
-
- <span class="k">if</span> <span class="n">ti</span> <span class="ow">not</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'times'</span><span class="p">]:</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'times'</span><span class="p">]:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'times'</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'times'</span><span class="p">]</span> <span class="o">+=</span> <span class="n">ti</span>
-
- <span class="k">if</span> <span class="n">st</span> <span class="ow">not</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'steps'</span><span class="p">]:</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'steps'</span><span class="p">]:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'steps'</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/'</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ty</span><span class="p">][</span><span class="s1">'steps'</span><span class="p">]</span> <span class="o">+=</span> <span class="n">st</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">_create_field_types_fluxes</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Create the combination of field type, time and forecast step</span>
-<span class="sd"> for the flux data.</span>
-
-<span class="sd"> Parameters:</span>
-<span class="sd"> -----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">acctype</span><span class="p">)]</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'times'</span><span class="p">:</span> <span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">acctime</span><span class="p">),</span>
- <span class="s1">'steps'</span><span class="p">:</span> <span class="s1">'</span><span class="si">{}</span><span class="s1">/to/</span><span class="si">{}</span><span class="s1">/by/</span><span class="si">{}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dtime</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accmaxstep</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dtime</span><span class="p">)}</span>
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">_create_params</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">gauss</span><span class="p">,</span> <span class="n">eta</span><span class="p">,</span> <span class="n">omega</span><span class="p">,</span> <span class="n">cwc</span><span class="p">,</span> <span class="n">wrf</span><span class="p">):</span>
- <span class="sd">'''Define the specific parameter settings for retrievment.</span>
-
-<span class="sd"> The different parameters need specific grid types and level types</span>
-<span class="sd"> for retrievement. We might get following combination of types</span>
-<span class="sd"> (depending on selection and availability):</span>
-<span class="sd"> (These are short cuts for the grib file names (leading sequence)</span>
-<span class="sd"> SH__ML, OG__ML, GG__ML, SH__SL, OG__SL, GG__SL, OG_OROLSM_SL</span>
-<span class="sd"> where:</span>
-<span class="sd"> SH = Spherical Harmonics, GG = Gaussian Grid, OG = Output Grid,</span>
-<span class="sd"> ML = Model Level, SL = Surface Level</span>
-
-<span class="sd"> For each of this combination there is a list of parameter names,</span>
-<span class="sd"> the level type, the level list and the grid resolution.</span>
-
-<span class="sd"> There are different scenarios for data extraction from MARS:</span>
-<span class="sd"> 1) Retrieval of etadot</span>
-<span class="sd"> eta=1, gauss=0, omega=0</span>
-<span class="sd"> 2) Calculation of etadot from divergence</span>
-<span class="sd"> eta=0, gauss=1, omega=0</span>
-<span class="sd"> 3) Calculation of etadot from omega (for makes sense for debugging)</span>
-<span class="sd"> eta=0, gauss=0, omega=1</span>
-<span class="sd"> 4) Retrieval and Calculation of etadot (only for debugging)</span>
-<span class="sd"> eta=1, gauss=1, omega=0</span>
-<span class="sd"> 5) Download also specific model and surface level data for FLEXPART-WRF</span>
-
-<span class="sd"> Parameters:</span>
-<span class="sd"> -----------</span>
-<span class="sd"> gauss : int</span>
-<span class="sd"> Gaussian grid is retrieved.</span>
-
-<span class="sd"> eta : int</span>
-<span class="sd"> Etadot parameter will be directly retrieved.</span>
-
-<span class="sd"> omega : int</span>
-<span class="sd"> The omega paramterwill be retrieved.</span>
-
-<span class="sd"> cwc : int</span>
-<span class="sd"> The cloud liquid and ice water content will be retrieved.</span>
-
-<span class="sd"> wrf : int</span>
-<span class="sd"> Additional model level and surface level data will be retrieved for</span>
-<span class="sd"> WRF/FLEXPART-WRF simulations.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># SURFACE FIELDS</span>
- <span class="c1">#-----------------------------------------------------------------------</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'SH__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'LNSP'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> <span class="s1">'OFF'</span><span class="p">]</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'SD/MSL/TCC/10U/10V/2T/2D/Z/LSM'</span><span class="p">,</span> \
- <span class="s1">'SFC'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">]</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">addpar</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__SL'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="bp">self</span><span class="o">.</span><span class="n">addpar</span>
-
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'EA'</span> <span class="ow">or</span> <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'EP'</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG_OROLSM__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"SDOR/CVL/CVH/FSR"</span><span class="p">,</span>
- <span class="s1">'SFC'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG_OROLSM__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"SDOR/CVL/CVH/SR"</span><span class="p">,</span> \
- <span class="s1">'SFC'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">]</span>
-
- <span class="c1"># MODEL LEVEL FIELDS</span>
- <span class="c1">#-----------------------------------------------------------------------</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'T/Q'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">levelist</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">]</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">gauss</span> <span class="ow">and</span> <span class="n">eta</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/U/V/ETADOT'</span>
- <span class="k">elif</span> <span class="n">gauss</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">eta</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'GG__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'Q'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> \
- <span class="s1">'</span><span class="si">{}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">((</span><span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">resol</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="p">)</span> <span class="o">/</span> <span class="mi">2</span><span class="p">)]</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'SH__ML'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'U/V/D'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">glevelist</span><span class="p">,</span> <span class="s1">'OFF'</span><span class="p">]</span>
- <span class="k">elif</span> <span class="ow">not</span> <span class="n">gauss</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">eta</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/U/V'</span>
- <span class="k">else</span><span class="p">:</span> <span class="c1"># GAUSS and ETA</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Warning: Collecting etadot and parameters for gaussian grid '</span>
- <span class="s1">'is a very costly parameter combination, '</span>
- <span class="s1">'use this combination only for debugging!'</span><span class="p">)</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'GG__SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'Q'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span>
- <span class="s1">'</span><span class="si">{}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">((</span><span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">resol</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="p">)</span> <span class="o">/</span> <span class="mi">2</span><span class="p">)]</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'GG__ML'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'U/V/D/ETADOT'</span><span class="p">,</span> <span class="s1">'ML'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">glevelist</span><span class="p">,</span>
- <span class="s1">'</span><span class="si">{}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">((</span><span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">resol</span><span class="p">)</span> <span class="o">+</span> <span class="mi">1</span><span class="p">)</span> <span class="o">/</span> <span class="mi">2</span><span class="p">)]</span>
-
- <span class="k">if</span> <span class="n">omega</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/W'</span>
-
- <span class="k">if</span> <span class="n">cwc</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/CLWC/CIWC'</span>
-
- <span class="c1"># ADDITIONAL FIELDS FOR FLEXPART-WRF MODEL (IF QUESTIONED)</span>
- <span class="c1"># -----------------------------------------------------------------------</span>
- <span class="k">if</span> <span class="n">wrf</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/Z/VO'</span>
- <span class="k">if</span> <span class="s1">'/D'</span> <span class="ow">not</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__ML'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/D'</span>
-
- <span class="n">wrf_sfc</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'SP'</span><span class="p">,</span><span class="s1">'SKT'</span><span class="p">,</span><span class="s1">'SST'</span><span class="p">,</span><span class="s1">'CI'</span><span class="p">,</span><span class="s1">'STL1'</span><span class="p">,</span><span class="s1">'STL2'</span><span class="p">,</span> <span class="s1">'STL3'</span><span class="p">,</span><span class="s1">'STL4'</span><span class="p">,</span>
- <span class="s1">'SWVL1'</span><span class="p">,</span><span class="s1">'SWVL2'</span><span class="p">,</span><span class="s1">'SWVL3'</span><span class="p">,</span><span class="s1">'SWVL4'</span><span class="p">]</span>
- <span class="k">for</span> <span class="n">par</span> <span class="ow">in</span> <span class="n">wrf_sfc</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">par</span> <span class="ow">not</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__SL'</span><span class="p">][</span><span class="mi">0</span><span class="p">]:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG__SL'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+=</span> <span class="s1">'/'</span> <span class="o">+</span> <span class="n">par</span>
-
- <span class="k">return</span>
-
-
- <span class="k">def</span> <span class="nf">_create_params_fluxes</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Define the parameter setting for flux data.</span>
-
-<span class="sd"> Flux data are accumulated fields in time and are stored on the</span>
-<span class="sd"> surface level. The leading short cut name for the grib files is:</span>
-<span class="sd"> "OG_acc_SL" with OG for Regular Output Grid, SL for Surface Level, and</span>
-<span class="sd"> acc for Accumulated Grid.</span>
-<span class="sd"> The params dictionary stores a list of parameter names, the level type,</span>
-<span class="sd"> the level list and the grid resolution.</span>
-
-<span class="sd"> The flux data are: LSP/CP/SSHF/EWSS/NSSS/SSR</span>
-
-<span class="sd"> Parameters:</span>
-<span class="sd"> -----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG_acc_SL'</span><span class="p">]</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"LSP/CP/SSHF/EWSS/NSSS/SSR"</span><span class="p">,</span>
- <span class="s1">'SFC'</span><span class="p">,</span> <span class="s1">'1'</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="p">]</span>
- <span class="k">return</span>
-
-
- <span class="k">def</span> <span class="nf">_mk_targetname</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">ftype</span><span class="p">,</span> <span class="n">param</span><span class="p">,</span> <span class="n">date</span><span class="p">):</span>
- <span class="sd">'''Creates the filename for the requested grib data to be stored in.</span>
-<span class="sd"> This name is passed as the "target" parameter in the request.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ftype : str</span>
-<span class="sd"> Shortcut name of the type of the field. E.g. AN, FC, PF, ...</span>
-
-<span class="sd"> param : str</span>
-<span class="sd"> Shortcut of the grid type. E.g. SH__ML, SH__SL, GG__ML,</span>
-<span class="sd"> GG__SL, OG__ML, OG__SL, OG_OROLSM_SL, OG_acc_SL</span>
-
-<span class="sd"> date : str</span>
-<span class="sd"> The date period of the grib data to be stored in this file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> targetname : str</span>
-<span class="sd"> The target filename for the grib data.</span>
-<span class="sd"> '''</span>
- <span class="n">targetname</span> <span class="o">=</span> <span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">+</span> <span class="s1">'/'</span> <span class="o">+</span> <span class="n">ftype</span> <span class="o">+</span> <span class="n">param</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span> <span class="n">date</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">getppid</span><span class="p">())</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">getpid</span><span class="p">())</span> <span class="o">+</span> <span class="s1">'.grb'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">targetname</span>
-
-
- <span class="k">def</span> <span class="nf">_start_retrievement</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">request</span><span class="p">,</span> <span class="n">par_dict</span><span class="p">):</span>
- <span class="sd">'''Creates the Mars Retrieval and prints or submits the request</span>
-<span class="sd"> depending on the status of the request variable.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> request : int</span>
-<span class="sd"> Selects the mode of retrieval.</span>
-<span class="sd"> 0: Retrieves the data from ECMWF.</span>
-<span class="sd"> 1: Prints the mars requests to an output file.</span>
-<span class="sd"> 2: Retrieves the data and prints the mars request.</span>
-
-<span class="sd"> par_dict : dictionary</span>
-<span class="sd"> Contains all parameter which have to be set for creating the</span>
-<span class="sd"> Mars Retrievals. The parameter are:</span>
-<span class="sd"> marsclass, dataset, stream, type, levtype, levelist, resol,</span>
-<span class="sd"> gaussian, accuracy, grid, target, area, date, time, number,</span>
-<span class="sd"> step, expver, param</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># increase number of mars requests</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">mreq_count</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="n">MR</span> <span class="o">=</span> <span class="n">MarsRetrieval</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="p">,</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">public</span><span class="p">,</span>
- <span class="n">marsclass</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'marsclass'</span><span class="p">],</span>
- <span class="n">dataset</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'dataset'</span><span class="p">],</span>
- <span class="n">stream</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'stream'</span><span class="p">],</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'type'</span><span class="p">],</span>
- <span class="n">levtype</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'levtype'</span><span class="p">],</span>
- <span class="n">levelist</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'levelist'</span><span class="p">],</span>
- <span class="n">resol</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'resol'</span><span class="p">],</span>
- <span class="n">gaussian</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'gaussian'</span><span class="p">],</span>
- <span class="n">accuracy</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'accuracy'</span><span class="p">],</span>
- <span class="n">grid</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'grid'</span><span class="p">],</span>
- <span class="n">target</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">],</span>
- <span class="n">area</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'area'</span><span class="p">],</span>
- <span class="n">date</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">],</span>
- <span class="n">time</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">],</span>
- <span class="n">number</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'number'</span><span class="p">],</span>
- <span class="n">step</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">],</span>
- <span class="n">expver</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'expver'</span><span class="p">],</span>
- <span class="n">param</span><span class="o">=</span><span class="n">par_dict</span><span class="p">[</span><span class="s1">'param'</span><span class="p">])</span>
-
- <span class="k">if</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">display_info</span><span class="p">()</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">data_retrieve</span><span class="p">()</span>
- <span class="k">elif</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">print_infodata_csv</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">mreq_count</span><span class="p">)</span>
- <span class="k">elif</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">print_infodata_csv</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">mreq_count</span><span class="p">)</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">display_info</span><span class="p">()</span>
- <span class="n">MR</span><span class="o">.</span><span class="n">data_retrieve</span><span class="p">()</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Failure'</span><span class="p">)</span>
-
- <span class="k">return</span>
-
-
- <span class="k">def</span> <span class="nf">_mk_index_values</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">inputdir</span><span class="p">,</span> <span class="n">inputfiles</span><span class="p">,</span> <span class="n">keys</span><span class="p">):</span>
- <span class="sd">'''Creates an index file for a set of grib parameter keys.</span>
-<span class="sd"> The values from the index keys are returned in a list.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> keys : dictionary</span>
-<span class="sd"> List of parameter names which serves as index.</span>
-
-<span class="sd"> inputfiles : UioFiles</span>
-<span class="sd"> Contains a list of files.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> iid : codes_index</span>
-<span class="sd"> This is a grib specific index structure to access</span>
-<span class="sd"> messages in a file.</span>
-
-<span class="sd"> index_vals : list of list of str</span>
-<span class="sd"> Contains the values from the keys used for a distinct selection</span>
-<span class="sd"> of grib messages in processing the grib files.</span>
-<span class="sd"> Content looks like e.g.:</span>
-<span class="sd"> index_vals[0]: ('20171106', '20171107', '20171108') ; date</span>
-<span class="sd"> index_vals[1]: ('0', '1200', '1800', '600') ; time</span>
-<span class="sd"> index_vals[2]: ('0', '12', '3', '6', '9') ; stepRange</span>
-<span class="sd"> '''</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="n">index_keys</span> <span class="o">=</span> <span class="n">keys</span>
-
- <span class="n">indexfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">_config</span><span class="o">.</span><span class="n">FILE_GRIB_INDEX</span><span class="p">)</span>
- <span class="n">silent_remove</span><span class="p">(</span><span class="n">indexfile</span><span class="p">)</span>
- <span class="n">grib</span> <span class="o">=</span> <span class="n">GribUtil</span><span class="p">(</span><span class="n">inputfiles</span><span class="o">.</span><span class="n">files</span><span class="p">)</span>
- <span class="c1"># creates new index file</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="n">grib</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="n">index_keys</span><span class="o">=</span><span class="n">index_keys</span><span class="p">,</span> <span class="n">index_file</span><span class="o">=</span><span class="n">indexfile</span><span class="p">)</span>
-
- <span class="c1"># read the values of index keys</span>
- <span class="n">index_vals</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">index_keys</span><span class="p">:</span>
- <span class="n">key_vals</span> <span class="o">=</span> <span class="n">codes_index_get</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">key</span><span class="p">)</span>
- <span class="c1"># have to sort the key values for correct disaggregation,</span>
- <span class="c1"># therefore convert to int first</span>
- <span class="n">key_vals</span> <span class="o">=</span> <span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">k</span><span class="p">)</span> <span class="k">for</span> <span class="n">k</span> <span class="ow">in</span> <span class="n">key_vals</span><span class="p">]</span>
- <span class="n">key_vals</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
- <span class="n">key_vals</span> <span class="o">=</span> <span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="n">k</span><span class="p">)</span> <span class="k">for</span> <span class="n">k</span> <span class="ow">in</span> <span class="n">key_vals</span><span class="p">]</span>
- <span class="n">index_vals</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">key_vals</span><span class="p">)</span>
- <span class="c1"># index_vals looks for example like:</span>
- <span class="c1"># index_vals[0]: ('20171106', '20171107', '20171108') ; date</span>
- <span class="c1"># index_vals[1]: ('0', '1200') ; time</span>
- <span class="c1"># index_vals[2]: (3', '6', '9', '12') ; stepRange</span>
-
- <span class="k">return</span> <span class="n">iid</span><span class="p">,</span> <span class="n">index_vals</span>
-
-
-<div class="viewcode-block" id="EcFlexpart.retrieve"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.retrieve">[docs]</a> <span class="k">def</span> <span class="nf">retrieve</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">server</span><span class="p">,</span> <span class="n">dates</span><span class="p">,</span> <span class="n">public</span><span class="p">,</span> <span class="n">request</span><span class="p">,</span> <span class="n">inputdir</span><span class="o">=</span><span class="s1">'.'</span><span class="p">):</span>
- <span class="sd">'''Finalizing the retrieval information by setting final details</span>
-<span class="sd"> depending on grid type.</span>
-<span class="sd"> Prepares MARS retrievals per grid type and submits them.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> server : ECMWFService or ECMWFDataServer</span>
-<span class="sd"> The connection to the ECMWF server. This is different</span>
-<span class="sd"> for member state users which have full access and non</span>
-<span class="sd"> member state users which have only access to the public</span>
-<span class="sd"> data sets. The decision is made from command line argument</span>
-<span class="sd"> "public"; for public access its True (ECMWFDataServer)</span>
-<span class="sd"> for member state users its False (ECMWFService)</span>
-
-<span class="sd"> dates : str</span>
-<span class="sd"> Contains start and end date of the retrieval in the format</span>
-<span class="sd"> "YYYYMMDD/to/YYYYMMDD"</span>
-
-<span class="sd"> request : int</span>
-<span class="sd"> Selects the mode of retrieval.</span>
-<span class="sd"> 0: Retrieves the data from ECMWF.</span>
-<span class="sd"> 1: Prints the mars requests to an output file.</span>
-<span class="sd"> 2: Retrieves the data and prints the mars request.</span>
-
-<span class="sd"> inputdir : str, optional</span>
-<span class="sd"> Path to the directory where the retrieved data is about</span>
-<span class="sd"> to be stored. The default is the current directory ('.').</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dates</span> <span class="o">=</span> <span class="n">dates</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">server</span> <span class="o">=</span> <span class="n">server</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">public</span> <span class="o">=</span> <span class="n">public</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">=</span> <span class="n">inputdir</span>
- <span class="n">oro</span> <span class="o">=</span> <span class="kc">False</span>
-
- <span class="c1"># define times with datetime module</span>
- <span class="n">t12h</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="mi">12</span><span class="p">)</span>
- <span class="n">t24h</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="mi">24</span><span class="p">)</span>
-
- <span class="c1"># dictionary which contains all parameter for the mars request,</span>
- <span class="c1"># entries with a "None" will change in different requests and will</span>
- <span class="c1"># therefore be set in each request seperately</span>
- <span class="n">retr_param_dict</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'marsclass'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="p">,</span>
- <span class="s1">'dataset'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">dataset</span><span class="p">,</span>
- <span class="s1">'stream'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'type'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'levtype'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'levelist'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'resol'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">resol</span><span class="p">,</span>
- <span class="s1">'gaussian'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'accuracy'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">accuracy</span><span class="p">,</span>
- <span class="s1">'grid'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'target'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'area'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'date'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'time'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'number'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">number</span><span class="p">,</span>
- <span class="s1">'step'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'expver'</span><span class="p">:</span><span class="bp">self</span><span class="o">.</span><span class="n">expver</span><span class="p">,</span>
- <span class="s1">'param'</span><span class="p">:</span><span class="kc">None</span><span class="p">}</span>
-
- <span class="k">for</span> <span class="n">ftype</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">:</span>
- <span class="c1"># ftype contains field types such as</span>
- <span class="c1"># [AN, FC, PF, CV]</span>
- <span class="k">for</span> <span class="n">pk</span><span class="p">,</span> <span class="n">pv</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="c1"># pk contains one of these keys of params</span>
- <span class="c1"># [SH__ML, SH__SL, GG__ML, GG__SL, OG__ML, OG__SL,</span>
- <span class="c1"># OG_OROLSM_SL, OG_acc_SL]</span>
- <span class="c1"># pv contains all of the items of the belonging key</span>
- <span class="c1"># [param, levtype, levelist, grid]</span>
- <span class="k">if</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">pv</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
- <span class="k">continue</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ftype</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ftype</span><span class="p">][</span><span class="s1">'times'</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">types</span><span class="p">[</span><span class="n">ftype</span><span class="p">][</span><span class="s1">'steps'</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dates</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'stream'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">stream</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="bp">self</span><span class="o">.</span><span class="n">_mk_targetname</span><span class="p">(</span><span class="n">ftype</span><span class="p">,</span>
- <span class="n">pk</span><span class="p">,</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="mi">0</span><span class="p">])</span>
- <span class="n">table128</span> <span class="o">=</span> <span class="n">init128</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_GRIBTABLE</span><span class="p">)</span>
- <span class="n">ids</span> <span class="o">=</span> <span class="n">to_param_id_with_tablenumber</span><span class="p">(</span><span class="n">pv</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">table128</span><span class="p">)</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'param'</span><span class="p">]</span> <span class="o">=</span> <span class="n">ids</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'levtype'</span><span class="p">]</span> <span class="o">=</span> <span class="n">pv</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'levelist'</span><span class="p">]</span> <span class="o">=</span> <span class="n">pv</span><span class="p">[</span><span class="mi">2</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'grid'</span><span class="p">]</span> <span class="o">=</span> <span class="n">pv</span><span class="p">[</span><span class="mi">3</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'area'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">area</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'gaussian'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">gaussian</span>
-
- <span class="k">if</span> <span class="n">pk</span> <span class="o">==</span> <span class="s1">'OG_OROLSM__SL'</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">oro</span><span class="p">:</span>
- <span class="n">oro</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="c1"># in CERA20C (class EP) there is no stream "OPER"!</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">!=</span> <span class="s1">'EP'</span><span class="p">:</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'stream'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'OPER'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'type'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'AN'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'00'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'000'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dates</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mk_targetname</span><span class="p">(</span><span class="s1">''</span><span class="p">,</span>
- <span class="n">pk</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">pk</span> <span class="o">==</span> <span class="s1">'OG_OROLSM__SL'</span> <span class="ow">and</span> <span class="n">oro</span><span class="p">:</span>
- <span class="k">continue</span>
- <span class="k">if</span> <span class="n">pk</span> <span class="o">==</span> <span class="s1">'GG__SL'</span> <span class="ow">and</span> <span class="n">pv</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">==</span> <span class="s1">'Q'</span><span class="p">:</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'area'</span><span class="p">]</span> <span class="o">=</span> <span class="s2">""</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'gaussian'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'reduced'</span>
- <span class="k">if</span> <span class="n">ftype</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'FC'</span> <span class="ow">and</span> \
- <span class="s1">'acc'</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]:</span>
- <span class="k">if</span> <span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span> <span class="o">+</span>
- <span class="nb">int</span><span class="p">(</span><span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">][</span><span class="mi">0</span><span class="p">]))</span> <span class="o">></span> <span class="mi">23</span><span class="p">:</span>
- <span class="n">dates</span> <span class="o">=</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
- <span class="n">sdate</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">dates</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">sdate</span> <span class="o">=</span> <span class="n">sdate</span> <span class="o">-</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'/'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span>
- <span class="p">[</span><span class="n">sdate</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)]</span> <span class="o">+</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">][</span><span class="mi">1</span><span class="p">:])</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'CHANGED FC start date to '</span> <span class="o">+</span>
- <span class="n">sdate</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span> <span class="o">+</span>
- <span class="s1">' to accomodate TIME='</span> <span class="o">+</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span> <span class="o">+</span>
- <span class="s1">', STEP='</span> <span class="o">+</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span>
-
- <span class="c1"># ------ on demand path --------------------------------------------------</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="c1"># ******* start retrievement</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_start_retrievement</span><span class="p">(</span><span class="n">request</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">)</span>
- <span class="c1"># ------ operational path ------------------------------------------------</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># check if mars job requests fields beyond basetime.</span>
- <span class="c1"># if yes eliminate those fields since they may not</span>
- <span class="c1"># be accessible with user's credentials</span>
-
- <span class="n">enddate</span> <span class="o">=</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
- <span class="n">elimit</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">enddate</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">basetime</span><span class="p">),</span>
- <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">12</span><span class="p">:</span>
- <span class="c1"># -------------- flux data ----------------------------</span>
- <span class="k">if</span> <span class="s1">'acc'</span> <span class="ow">in</span> <span class="n">pk</span><span class="p">:</span>
- <span class="n">startdate</span> <span class="o">=</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="n">enddate</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">elimit</span> <span class="o">-</span> <span class="n">t24h</span><span class="p">,</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'/'</span><span class="o">.</span><span class="n">join</span><span class="p">([</span><span class="n">startdate</span><span class="p">,</span>
- <span class="s1">'to'</span><span class="p">,</span>
- <span class="n">enddate</span><span class="p">])</span>
-
- <span class="c1"># ******* start retrievement</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_start_retrievement</span><span class="p">(</span><span class="n">request</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">)</span>
-
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">elimit</span> <span class="o">-</span> <span class="n">t12h</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'00'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="bp">self</span><span class="o">.</span><span class="n">_mk_targetname</span><span class="p">(</span><span class="n">ftype</span><span class="p">,</span> <span class="n">pk</span><span class="p">,</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">])</span>
-
- <span class="c1"># ******* start retrievement</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_start_retrievement</span><span class="p">(</span><span class="n">request</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">)</span>
-
- <span class="c1"># -------------- non flux data ------------------------</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># ******* start retrievement</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_start_retrievement</span><span class="p">(</span><span class="n">request</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">)</span>
-
- <span class="k">elif</span> <span class="bp">self</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">elimit</span> <span class="o">-</span> <span class="n">t24h</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="n">timesave</span> <span class="o">=</span> <span class="s1">''</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">])</span>
-
- <span class="k">if</span> <span class="p">(</span><span class="s1">'/'</span> <span class="ow">in</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="ow">and</span>
- <span class="n">pk</span> <span class="o">!=</span> <span class="s1">'OG_OROLSM__SL'</span> <span class="ow">and</span>
- <span class="s1">'acc'</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">pk</span> <span class="p">)</span> <span class="p">:</span>
- <span class="n">times</span> <span class="o">=</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
- <span class="n">steps</span> <span class="o">=</span> <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
-
- <span class="k">while</span> <span class="nb">int</span><span class="p">(</span><span class="n">times</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span> <span class="o">+</span> <span class="nb">int</span><span class="p">(</span><span class="n">steps</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span> <span class="o"><=</span> <span class="mi">12</span><span class="p">:</span>
- <span class="n">times</span> <span class="o">=</span> <span class="n">times</span><span class="p">[</span><span class="mi">1</span><span class="p">:]</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">times</span><span class="p">)</span> <span class="o">></span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'/'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">times</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="n">times</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
-
- <span class="k">if</span> <span class="p">(</span><span class="n">pk</span> <span class="o">!=</span> <span class="s1">'OG_OROLSM__SL'</span> <span class="ow">and</span>
- <span class="nb">int</span><span class="p">(</span><span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="mi">0</span><span class="p">])</span> <span class="o">==</span> <span class="mi">0</span> <span class="ow">and</span>
- <span class="nb">int</span><span class="p">(</span><span class="n">timesave</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="mi">0</span><span class="p">])</span> <span class="o">==</span> <span class="mi">0</span><span class="p">):</span>
-
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">elimit</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'time'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'00'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'step'</span><span class="p">]</span> <span class="o">=</span> <span class="s1">'000'</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]</span> <span class="o">=</span> \
- <span class="bp">self</span><span class="o">.</span><span class="n">_mk_targetname</span><span class="p">(</span><span class="n">ftype</span><span class="p">,</span> <span class="n">pk</span><span class="p">,</span>
- <span class="n">retr_param_dict</span><span class="p">[</span><span class="s1">'date'</span><span class="p">])</span>
-
- <span class="c1"># ******* start retrievement</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_start_retrievement</span><span class="p">(</span><span class="n">request</span><span class="p">,</span> <span class="n">retr_param_dict</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">raise</span> <span class="ne">ValueError</span><span class="p">(</span><span class="s1">'ERROR: Basetime has an invalid value '</span>
- <span class="s1">'-> </span><span class="si">{}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">basetime</span><span class="p">)))</span>
-
- <span class="k">if</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">0</span> <span class="ow">or</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'MARS retrieve done ... '</span><span class="p">)</span>
- <span class="k">elif</span> <span class="n">request</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'MARS request printed ...'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="EcFlexpart.write_namelist"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.write_namelist">[docs]</a> <span class="k">def</span> <span class="nf">write_namelist</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Creates a namelist file in the temporary directory and writes</span>
-<span class="sd"> the following values to it: maxl, maxb, mlevel,</span>
-<span class="sd"> mlevelist, mnauf, metapar, rlo0, rlo1, rla0, rla1,</span>
-<span class="sd"> momega, momegadiff, mgauss, msmooth, meta, metadiff, mdpdeta</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> filename : str</span>
-<span class="sd"> Name of the namelist file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
- <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span> <span class="n">TemplateLoader</span>
- <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">loader</span> <span class="o">=</span> <span class="n">TemplateLoader</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span> <span class="n">auto_reload</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">namelist_template</span> <span class="o">=</span> <span class="n">loader</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_NAMELIST</span><span class="p">,</span>
- <span class="bp">cls</span><span class="o">=</span><span class="n">NewTextTemplate</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span>
- <span class="n">area</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">asarray</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">area</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
- <span class="n">grid</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">asarray</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">grid</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">))</span><span class="o">.</span><span class="n">astype</span><span class="p">(</span><span class="nb">float</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">area</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">></span> <span class="n">area</span><span class="p">[</span><span class="mi">3</span><span class="p">]:</span>
- <span class="n">area</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">-=</span> <span class="mi">360</span>
- <span class="n">maxl</span> <span class="o">=</span> <span class="nb">int</span><span class="p">((</span><span class="n">area</span><span class="p">[</span><span class="mi">3</span><span class="p">]</span> <span class="o">-</span> <span class="n">area</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span> <span class="o">/</span> <span class="n">grid</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span> <span class="o">+</span> <span class="mi">1</span>
- <span class="n">maxb</span> <span class="o">=</span> <span class="nb">int</span><span class="p">((</span><span class="n">area</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">-</span> <span class="n">area</span><span class="p">[</span><span class="mi">2</span><span class="p">])</span> <span class="o">/</span> <span class="n">grid</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span> <span class="o">+</span> <span class="mi">1</span>
-
- <span class="n">stream</span> <span class="o">=</span> <span class="n">namelist_template</span><span class="o">.</span><span class="n">generate</span><span class="p">(</span>
- <span class="n">maxl</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">maxl</span><span class="p">),</span>
- <span class="n">maxb</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">maxb</span><span class="p">),</span>
- <span class="n">mlevel</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">level</span><span class="p">),</span>
- <span class="n">mlevelist</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">levelist</span><span class="p">),</span>
- <span class="n">mnauf</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">resol</span><span class="p">),</span>
- <span class="n">metapar</span> <span class="o">=</span> <span class="s1">'77'</span><span class="p">,</span>
- <span class="n">rlo0</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">area</span><span class="p">[</span><span class="mi">1</span><span class="p">]),</span>
- <span class="n">rlo1</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">area</span><span class="p">[</span><span class="mi">3</span><span class="p">]),</span>
- <span class="n">rla0</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">area</span><span class="p">[</span><span class="mi">2</span><span class="p">]),</span>
- <span class="n">rla1</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">area</span><span class="p">[</span><span class="mi">0</span><span class="p">]),</span>
- <span class="n">momega</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">omega</span><span class="p">),</span>
- <span class="n">momegadiff</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">omegadiff</span><span class="p">),</span>
- <span class="n">mgauss</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">gauss</span><span class="p">),</span>
- <span class="n">msmooth</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">smooth</span><span class="p">),</span>
- <span class="n">meta</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">eta</span><span class="p">),</span>
- <span class="n">metadiff</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">etadiff</span><span class="p">),</span>
- <span class="n">mdpdeta</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dpdeta</span><span class="p">)</span>
- <span class="p">)</span>
- <span class="k">except</span> <span class="n">UndefinedError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate namelist '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_NAMELIST</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_NAMELIST</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">namelistfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">_config</span><span class="o">.</span><span class="n">FILE_NAMELIST</span><span class="p">)</span>
-
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">namelistfile</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">stream</span><span class="o">.</span><span class="n">render</span><span class="p">(</span><span class="s1">'text'</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to write '</span> <span class="o">+</span>
- <span class="n">namelistfile</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="EcFlexpart.deacc_fluxes"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.deacc_fluxes">[docs]</a> <span class="k">def</span> <span class="nf">deacc_fluxes</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">inputfiles</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''De-accumulate and disaggregate flux data.</span>
-
-<span class="sd"> Goes through all flux fields in ordered time and de-accumulate</span>
-<span class="sd"> the fields. Afterwards the fields are disaggregated in time.</span>
-<span class="sd"> Different versions of disaggregation is provided for rainfall</span>
-<span class="sd"> data (darain, modified linear) and the surface fluxes and</span>
-<span class="sd"> stress data (dapoly, cubic polynomial).</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> inputfiles : UioFiles</span>
-<span class="sd"> Contains the list of files that contain flux data.</span>
-
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">table128</span> <span class="o">=</span> <span class="n">init128</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_GRIBTABLE</span><span class="p">)</span>
- <span class="n">pars</span> <span class="o">=</span> <span class="n">to_param_id</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">params</span><span class="p">[</span><span class="s1">'OG_acc_SL'</span><span class="p">][</span><span class="mi">0</span><span class="p">],</span> <span class="n">table128</span><span class="p">)</span>
-
- <span class="n">iid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="n">index_vals</span> <span class="o">=</span> <span class="kc">None</span>
-
- <span class="c1"># get the values of the keys which are used for distinct access</span>
- <span class="c1"># of grib messages via product</span>
- <span class="k">if</span> <span class="s1">'/'</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">number</span><span class="p">:</span>
- <span class="c1"># more than one ensemble member is selected</span>
- <span class="n">index_keys</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"number"</span><span class="p">,</span> <span class="s2">"date"</span><span class="p">,</span> <span class="s2">"time"</span><span class="p">,</span> <span class="s2">"step"</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">index_keys</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"date"</span><span class="p">,</span> <span class="s2">"time"</span><span class="p">,</span> <span class="s2">"step"</span><span class="p">]</span>
- <span class="n">iid</span><span class="p">,</span> <span class="n">index_vals</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mk_index_values</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span>
- <span class="n">inputfiles</span><span class="p">,</span>
- <span class="n">index_keys</span><span class="p">)</span>
- <span class="c1"># index_vals looks like e.g.:</span>
- <span class="c1"># index_vals[0]: ('20171106', '20171107', '20171108') ; date</span>
- <span class="c1"># index_vals[1]: ('0', '600', '1200', '1800') ; time</span>
- <span class="c1"># index_vals[2]: ('0', '3', '6', '9', '12') ; stepRange</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">start_date</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span> <span class="o">+</span> <span class="s1">'00'</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">end_date</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="s1">'23'</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">sdate_str</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">start_date</span> <span class="o">+</span> <span class="s1">'</span><span class="si">{:0>2}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="mi">1</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span>
- <span class="n">start_date</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">sdate_str</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">edate_str</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="s1">'</span><span class="si">{:0>2}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="mi">1</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
- <span class="n">end_date</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">edate_str</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">end_date</span> <span class="o">=</span> <span class="n">end_date</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="n">c</span><span class="o">.</span><span class="n">maxstep</span><span class="p">)</span>
-
- <span class="n">info</span> <span class="o">=</span> <span class="n">get_informations</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span>
- <span class="n">inputfiles</span><span class="o">.</span><span class="n">files</span><span class="p">[</span><span class="mi">0</span><span class="p">]))</span>
- <span class="n">dims</span> <span class="o">=</span> <span class="n">get_dimensions</span><span class="p">(</span><span class="n">info</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">,</span> <span class="n">index_vals</span><span class="p">,</span>
- <span class="n">start_date</span><span class="p">,</span> <span class="n">end_date</span><span class="p">)</span>
- <span class="c1"># create numpy array</span>
- <span class="n">lsp_np</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">dims</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">*</span> <span class="n">dims</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">dims</span><span class="p">[</span><span class="mi">2</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">)</span>
- <span class="n">cp_np</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">dims</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">*</span> <span class="n">dims</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">dims</span><span class="p">[</span><span class="mi">2</span><span class="p">]),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">)</span>
- <span class="n">it_lsp</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="n">it_cp</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="n">date_list</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="n">step_list</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="c1"># initialize dictionaries to store values</span>
- <span class="n">orig_vals</span> <span class="o">=</span> <span class="p">{}</span>
- <span class="n">deac_vals</span> <span class="o">=</span> <span class="p">{}</span>
- <span class="k">for</span> <span class="n">p</span> <span class="ow">in</span> <span class="n">pars</span><span class="p">:</span>
- <span class="n">orig_vals</span><span class="p">[</span><span class="n">p</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="n">deac_vals</span><span class="p">[</span><span class="n">p</span><span class="p">]</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="c1"># "product" genereates each possible combination between the</span>
- <span class="c1"># values of the index keys</span>
- <span class="k">for</span> <span class="n">prod</span> <span class="ow">in</span> <span class="n">product</span><span class="p">(</span><span class="o">*</span><span class="n">index_vals</span><span class="p">):</span>
- <span class="c1"># e.g. prod = ('20170505', '0', '12')</span>
- <span class="c1"># ( date ,time, step)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'CURRENT PRODUCT: '</span><span class="p">,</span> <span class="n">prod</span><span class="p">)</span>
-
- <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">index_keys</span><span class="p">)):</span>
- <span class="n">codes_index_select</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">index_keys</span><span class="p">[</span><span class="n">i</span><span class="p">],</span> <span class="n">prod</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
-
- <span class="c1"># get first id from current product</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_new_from_index</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-
- <span class="c1"># if there is no data for this specific time combination / product</span>
- <span class="c1"># skip the rest of the for loop and start with next timestep/product</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">gid</span><span class="p">:</span>
- <span class="k">continue</span>
-
- <span class="c1"># create correct timestamp from the three time informations</span>
- <span class="n">cdate</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'date'</span><span class="p">))</span>
- <span class="n">time</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">)</span><span class="o">/</span><span class="mi">100</span> <span class="c1"># integer</span>
- <span class="n">step</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'step'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="n">ctime</span> <span class="o">=</span> <span class="s1">'</span><span class="si">{:0>2}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">time</span><span class="p">)</span>
- <span class="n">cstep</span> <span class="o">=</span> <span class="s1">'</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="p">)</span>
-
- <span class="n">t_date</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">cdate</span> <span class="o">+</span> <span class="n">ctime</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">t_dt</span> <span class="o">=</span> <span class="n">t_date</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="n">step</span><span class="p">)</span>
- <span class="n">t_m1dt</span> <span class="o">=</span> <span class="n">t_date</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="n">step</span><span class="o">-</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="n">t_m2dt</span> <span class="o">=</span> <span class="n">t_date</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="n">step</span><span class="o">-</span><span class="mi">2</span><span class="o">*</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">t_enddate</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">basetime</span><span class="p">),</span>
- <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">t_enddate</span> <span class="o">=</span> <span class="n">t_date</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="mi">2</span><span class="o">*</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
-
- <span class="c1"># if necessary, add ensemble member number to filename suffix</span>
- <span class="c1"># otherwise, add empty string</span>
- <span class="k">if</span> <span class="s1">'number'</span> <span class="ow">in</span> <span class="n">index_keys</span><span class="p">:</span>
- <span class="n">index_number</span> <span class="o">=</span> <span class="n">index_keys</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="s1">'number'</span><span class="p">)</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="n">index_number</span><span class="p">])</span> <span class="o">></span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">numbersuffix</span> <span class="o">=</span> <span class="s1">'.N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">prod</span><span class="p">[</span><span class="n">index_number</span><span class="p">]))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">numbersuffix</span> <span class="o">=</span> <span class="s1">''</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">fnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span>
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="o">-</span><span class="mi">2</span><span class="o">*</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span> <span class="o">+</span>
- <span class="n">numbersuffix</span><span class="p">)</span>
- <span class="n">gnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span>
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="o">-</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span> <span class="o">+</span>
- <span class="n">numbersuffix</span><span class="p">)</span>
- <span class="n">hnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span>
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="p">)</span> <span class="o">+</span>
- <span class="n">numbersuffix</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">fnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_m2dt</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">+</span> <span class="n">numbersuffix</span><span class="p">)</span>
- <span class="n">gnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_m1dt</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">+</span> <span class="n">numbersuffix</span><span class="p">)</span>
- <span class="n">hnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'flux'</span> <span class="o">+</span>
- <span class="n">t_dt</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">+</span> <span class="n">numbersuffix</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s2">"outputfile = "</span> <span class="o">+</span> <span class="n">fnout</span><span class="p">)</span>
- <span class="n">f_handle</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fnout</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span>
- <span class="n">h_handle</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">hnout</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span>
- <span class="n">g_handle</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">gnout</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span>
-
- <span class="c1"># read message for message and store relevant data fields, where</span>
- <span class="c1"># data keywords are stored in pars</span>
- <span class="k">while</span> <span class="kc">True</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">gid</span><span class="p">:</span>
- <span class="k">break</span>
- <span class="n">parId</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'paramId'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="n">step</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'step'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="n">time</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="n">ni</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'Ni'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="n">nj</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'Nj'</span><span class="p">)</span> <span class="c1"># integer</span>
- <span class="k">if</span> <span class="n">parId</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">orig_vals</span><span class="o">.</span><span class="n">keys</span><span class="p">():</span>
- <span class="c1"># parameter is not a flux, find next one</span>
- <span class="k">continue</span>
-
- <span class="c1"># define conversion factor</span>
- <span class="k">if</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">142</span> <span class="ow">or</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">143</span><span class="p">:</span>
- <span class="n">fak</span> <span class="o">=</span> <span class="mf">1.</span> <span class="o">/</span> <span class="mf">1000.</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">fak</span> <span class="o">=</span> <span class="mf">3600.</span>
-
- <span class="c1"># get parameter values and reshape</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">codes_get_values</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
- <span class="n">values</span> <span class="o">=</span> <span class="p">(</span><span class="n">np</span><span class="o">.</span><span class="n">reshape</span><span class="p">(</span><span class="n">values</span><span class="p">,</span> <span class="p">(</span><span class="n">nj</span><span class="p">,</span> <span class="n">ni</span><span class="p">)))</span><span class="o">.</span><span class="n">flatten</span><span class="p">()</span> <span class="o">/</span> <span class="n">fak</span>
-
- <span class="c1"># save the original and accumulated values</span>
- <span class="n">orig_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">values</span><span class="p">[:])</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">marsclass</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'EA'</span> <span class="ow">or</span> <span class="n">step</span> <span class="o"><=</span> <span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">):</span>
- <span class="c1"># no de-accumulation needed</span>
- <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">values</span><span class="p">[:]</span> <span class="o">/</span> <span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># do de-accumulation</span>
- <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">]</span><span class="o">.</span><span class="n">append</span><span class="p">(</span>
- <span class="p">(</span><span class="n">orig_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="n">orig_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="o">-</span><span class="mi">2</span><span class="p">])</span> <span class="o">/</span>
- <span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
-
- <span class="c1"># store precipitation if new disaggregation method is selected</span>
- <span class="c1"># only the exact days are needed</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">start_date</span> <span class="o"><=</span> <span class="n">t_dt</span> <span class="o"><=</span> <span class="n">end_date</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">t_dt</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">date_list</span><span class="p">:</span>
- <span class="n">date_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">t_dt</span><span class="p">)</span>
- <span class="n">step_list</span> <span class="o">=</span> <span class="p">[</span><span class="mi">0</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">t_date</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">date_list</span><span class="p">:</span>
- <span class="n">date_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">t_date</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">step</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">step_list</span><span class="p">:</span>
- <span class="n">step_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">step</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span> <span class="ow">and</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">142</span><span class="p">:</span>
- <span class="n">lsp_np</span><span class="p">[:,</span><span class="n">it_lsp</span><span class="p">]</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">][:]</span>
- <span class="n">it_lsp</span> <span class="o">+=</span> <span class="mi">1</span>
- <span class="k">elif</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span> <span class="ow">and</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">143</span><span class="p">:</span>
- <span class="n">cp_np</span><span class="p">[:,</span><span class="n">it_cp</span><span class="p">]</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="o">-</span><span class="mi">1</span><span class="p">][:]</span>
- <span class="n">it_cp</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="c1"># information printout</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">parId</span><span class="p">,</span> <span class="n">time</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="nb">len</span><span class="p">(</span><span class="n">values</span><span class="p">),</span> <span class="n">values</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">np</span><span class="o">.</span><span class="n">std</span><span class="p">(</span><span class="n">values</span><span class="p">))</span>
-
- <span class="c1"># length of deac_vals[parId] corresponds to the</span>
- <span class="c1"># number of time steps, max. 4 are needed for disaggegration</span>
- <span class="c1"># with the old and original method</span>
- <span class="c1"># run over all grib messages and perform</span>
- <span class="c1"># shifting in time</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])</span> <span class="o">>=</span> <span class="mi">3</span><span class="p">:</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])</span> <span class="o">></span> <span class="mi">3</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span> <span class="ow">and</span> <span class="p">(</span><span class="n">parId</span> <span class="o">==</span> <span class="mi">142</span> <span class="ow">or</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">143</span><span class="p">):</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">darain</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">dapoly</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="p">(</span><span class="n">step</span> <span class="o">==</span> <span class="n">c</span><span class="o">.</span><span class="n">maxstep</span> <span class="ow">and</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span> \
- <span class="ow">or</span> <span class="n">t_dt</span> <span class="o">==</span> <span class="n">t_enddate</span><span class="p">):</span>
- <span class="c1"># remove first time step in list to shift</span>
- <span class="c1"># time line</span>
- <span class="n">orig_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">]</span><span class="o">.</span><span class="n">pop</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
- <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">]</span><span class="o">.</span><span class="n">pop</span><span class="p">(</span><span class="mi">0</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># if the third time step is read (per parId),</span>
- <span class="c1"># write out the first one as a boundary value</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="mi">1</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="mi">0</span><span class="p">]</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">rrint</span> <span class="ow">and</span> <span class="p">(</span><span class="n">parId</span> <span class="o">==</span> <span class="mi">142</span> <span class="ow">or</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">143</span><span class="p">)):</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">values</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="nb">max</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="n">step</span><span class="o">-</span><span class="mi">2</span><span class="o">*</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">)))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="mi">0</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">,</span> <span class="n">t_m2dt</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'date'</span><span class="p">,</span> <span class="nb">int</span><span class="p">(</span><span class="n">t_m2dt</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)))</span>
-
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">f_handle</span><span class="p">)</span>
-
- <span class="c1"># squeeze out information of last two steps</span>
- <span class="c1"># contained in deac_vals[parId]</span>
- <span class="c1"># Note that deac_vals[parId][0] has not been popped</span>
- <span class="c1"># in this case</span>
-
- <span class="k">if</span> <span class="n">step</span> <span class="o">==</span> <span class="n">c</span><span class="o">.</span><span class="n">maxstep</span> <span class="ow">and</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span> <span class="ow">or</span> \
- <span class="n">t_dt</span> <span class="o">==</span> <span class="n">t_enddate</span><span class="p">:</span>
- <span class="c1"># last step</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="mi">3</span><span class="p">]</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">values</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="n">step</span><span class="p">)</span>
- <span class="c1">#truedatetime = t_m2dt + timedelta(hours=2*int(c.dtime))</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">h_handle</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">][</span><span class="mi">3</span><span class="p">]</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">values</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="mi">0</span><span class="p">)</span>
- <span class="n">truedatetime</span> <span class="o">=</span> <span class="n">t_m2dt</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="mi">2</span><span class="o">*</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">,</span> <span class="n">truedatetime</span><span class="o">.</span><span class="n">hour</span> <span class="o">*</span> <span class="mi">100</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'date'</span><span class="p">,</span> <span class="nb">int</span><span class="p">(</span><span class="n">truedatetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)))</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">h_handle</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">142</span> <span class="ow">or</span> <span class="n">parId</span> <span class="o">==</span> <span class="mi">143</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">darain</span><span class="p">(</span><span class="nb">list</span><span class="p">(</span><span class="nb">reversed</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">dapoly</span><span class="p">(</span><span class="nb">list</span><span class="p">(</span><span class="nb">reversed</span><span class="p">(</span><span class="n">deac_vals</span><span class="p">[</span><span class="n">parId</span><span class="p">])))</span>
-
- <span class="c1"># step before last step</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="n">step</span><span class="o">-</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="c1">#truedatetime = t_m2dt + timedelta(hours=int(c.dtime))</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">values</span><span class="p">)</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">g_handle</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'stepRange'</span><span class="p">,</span> <span class="mi">0</span><span class="p">)</span>
- <span class="n">truedatetime</span> <span class="o">=</span> <span class="n">t_m2dt</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">,</span> <span class="n">truedatetime</span><span class="o">.</span><span class="n">hour</span> <span class="o">*</span> <span class="mi">100</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'date'</span><span class="p">,</span> <span class="nb">int</span><span class="p">(</span><span class="n">truedatetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)))</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">values</span><span class="p">)</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">g_handle</span><span class="p">)</span>
-
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_new_from_index</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-
- <span class="n">f_handle</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">g_handle</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">h_handle</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="n">codes_index_release</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">_create_rr_grib_dummy</span><span class="p">(</span><span class="n">inputfiles</span><span class="o">.</span><span class="n">files</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">_prep_new_rrint</span><span class="p">(</span><span class="n">ni</span><span class="p">,</span> <span class="n">nj</span><span class="p">,</span> <span class="n">lsp_np</span><span class="o">.</span><span class="n">shape</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span> <span class="n">lsp_np</span><span class="p">,</span>
- <span class="n">cp_np</span><span class="p">,</span> <span class="n">date_list</span><span class="p">,</span> <span class="n">step_list</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
- <span class="k">def</span> <span class="nf">_prep_new_rrint</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">ni</span><span class="p">,</span> <span class="n">nj</span><span class="p">,</span> <span class="n">nt</span><span class="p">,</span> <span class="n">lsp_np</span><span class="p">,</span> <span class="n">cp_np</span><span class="p">,</span> <span class="n">date_list</span><span class="p">,</span> <span class="n">step_list</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Calculates and writes out the disaggregated precipitation fields.</span>
-
-<span class="sd"> Disaggregation is done in time and original times are written to the</span>
-<span class="sd"> flux files, while the additional subgrid times are written to</span>
-<span class="sd"> extra files.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ni : int</span>
-<span class="sd"> Amount of zonal grid points.</span>
-
-<span class="sd"> nj : int</span>
-<span class="sd"> Amount of meridional grid points.</span>
-
-<span class="sd"> nt : int</span>
-<span class="sd"> Number of time steps.</span>
-
-<span class="sd"> lsp_np : numpy array of float</span>
-<span class="sd"> The large scale precipitation fields for each time step.</span>
-<span class="sd"> Shape (ni * nj, nt).</span>
-
-<span class="sd"> cp_np : numpy array of float</span>
-<span class="sd"> The convective precipitation fields for each time step.</span>
-<span class="sd"> Shape (ni * nj, nt).</span>
-
-<span class="sd"> date_list : list of datetime</span>
-<span class="sd"> The list of dates for which the disaggregation is to be done.</span>
-
-<span class="sd"> step_list : list of int</span>
-<span class="sd"> The list of steps for a single forecast time.</span>
-<span class="sd"> Only necessary for pure forecasts.</span>
-
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... disaggregation of precipitation with new method.'</span><span class="p">)</span>
- <span class="n">lsp_new_np</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">ni</span> <span class="o">*</span> <span class="n">nj</span><span class="p">,</span> <span class="n">nt</span> <span class="o">*</span> <span class="mi">3</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">)</span>
- <span class="n">cp_new_np</span> <span class="o">=</span> <span class="n">np</span><span class="o">.</span><span class="n">zeros</span><span class="p">((</span><span class="n">ni</span> <span class="o">*</span> <span class="n">nj</span><span class="p">,</span> <span class="n">nt</span> <span class="o">*</span> <span class="mi">3</span><span class="p">),</span> <span class="n">dtype</span><span class="o">=</span><span class="n">np</span><span class="o">.</span><span class="n">float64</span><span class="p">)</span>
-
- <span class="c1"># do the disaggregation, but neglect the last value of the</span>
- <span class="c1"># time series. This one corresponds for example to 24 hour,</span>
- <span class="c1"># which we don't need.</span>
- <span class="k">for</span> <span class="n">ix</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="n">ni</span><span class="o">*</span><span class="n">nj</span><span class="p">):</span>
- <span class="n">lsp_new_np</span><span class="p">[</span><span class="n">ix</span><span class="p">,:]</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">IA3</span><span class="p">(</span><span class="n">lsp_np</span><span class="p">[</span><span class="n">ix</span><span class="p">,:])[:</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
- <span class="n">cp_new_np</span><span class="p">[</span><span class="n">ix</span><span class="p">,:]</span> <span class="o">=</span> <span class="n">disaggregation</span><span class="o">.</span><span class="n">IA3</span><span class="p">(</span><span class="n">cp_np</span><span class="p">[</span><span class="n">ix</span><span class="p">,:])[:</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
-
- <span class="c1"># write to grib files (full/orig times to flux file and inbetween</span>
- <span class="c1"># times into seperate end files)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... write disaggregated precipitation to files.'</span><span class="p">)</span>
- <span class="n">it</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">date</span> <span class="ow">in</span> <span class="n">date_list</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">step</span> <span class="ow">in</span> <span class="n">step_list</span><span class="p">:</span>
- <span class="n">tmpfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'rr_grib_dummy.grb'</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">fluxfilename</span> <span class="o">=</span> <span class="s1">'flux'</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span> \
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="p">)</span>
- <span class="n">filename1</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span> \
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'_1'</span>
- <span class="n">filename2</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%y%m</span><span class="si">%d</span><span class="s1">.%H'</span><span class="p">)</span> <span class="o">+</span> \
- <span class="s1">'.</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">step</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'_2'</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">fluxfilename</span> <span class="o">=</span> <span class="s1">'flux'</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">filename1</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'_1'</span>
- <span class="n">filename2</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span> <span class="o">+</span> <span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'_2'</span>
-
- <span class="c1"># write original time step to flux file as usual</span>
- <span class="n">fluxfile</span> <span class="o">=</span> <span class="n">GribUtil</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">fluxfilename</span><span class="p">))</span>
- <span class="n">fluxfile</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'a'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">142</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">lsp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="p">]],</span>
- <span class="p">)</span>
- <span class="n">fluxfile</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'a'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">143</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">cp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="p">]]</span>
- <span class="p">)</span>
-
- <span class="c1"># write first subgrid time step</span>
- <span class="n">endfile1</span> <span class="o">=</span> <span class="n">GribUtil</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">filename1</span><span class="p">))</span>
- <span class="n">endfile1</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">142</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">lsp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="o">+</span><span class="mi">1</span><span class="p">]]</span>
- <span class="p">)</span>
- <span class="n">endfile1</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'a'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">143</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">cp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="o">+</span><span class="mi">1</span><span class="p">]]</span>
- <span class="p">)</span>
-
- <span class="c1"># write second subgrid time step</span>
- <span class="n">endfile2</span> <span class="o">=</span> <span class="n">GribUtil</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">filename2</span><span class="p">))</span>
- <span class="n">endfile2</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">142</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">lsp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="o">+</span><span class="mi">2</span><span class="p">]]</span>
- <span class="p">)</span>
- <span class="n">endfile2</span><span class="o">.</span><span class="n">set_keys</span><span class="p">(</span><span class="n">tmpfile</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'a'</span><span class="p">,</span> <span class="n">strict</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">143</span><span class="p">],</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'date'</span><span class="p">,</span><span class="s1">'time'</span><span class="p">,</span><span class="s1">'stepRange'</span><span class="p">,</span><span class="s1">'values'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="nb">int</span><span class="p">(</span><span class="n">date</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)),</span>
- <span class="n">date</span><span class="o">.</span><span class="n">hour</span><span class="o">*</span><span class="mi">100</span><span class="p">,</span> <span class="n">step</span><span class="p">,</span> <span class="n">cp_new_np</span><span class="p">[:,</span><span class="n">it</span><span class="o">+</span><span class="mi">2</span><span class="p">]]</span>
- <span class="p">)</span>
- <span class="n">it</span> <span class="o">=</span> <span class="n">it</span> <span class="o">+</span> <span class="mi">3</span> <span class="c1"># jump to next original time step</span>
- <span class="k">return</span>
-
- <span class="k">def</span> <span class="nf">_create_rr_grib_dummy</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">ifile</span><span class="p">,</span> <span class="n">inputdir</span><span class="p">):</span>
- <span class="sd">'''Creates a grib file with a dummy message for the two precipitation</span>
-<span class="sd"> types lsp and cp each.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ifile : str</span>
-<span class="sd"> Filename of the input file to read the grib messages from.</span>
-
-<span class="sd"> inputdir : str, optional</span>
-<span class="sd"> Path to the directory where the retrieved data is stored.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">gribfile</span> <span class="o">=</span> <span class="n">GribUtil</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">inputdir</span><span class="p">,</span><span class="s1">'rr_grib_dummy.grb'</span><span class="p">))</span>
-
- <span class="n">gribfile</span><span class="o">.</span><span class="n">copy_dummy_msg</span><span class="p">(</span><span class="n">ifile</span><span class="p">,</span> <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">142</span><span class="p">],</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">)</span>
-
- <span class="n">gribfile</span><span class="o">.</span><span class="n">copy_dummy_msg</span><span class="p">(</span><span class="n">ifile</span><span class="p">,</span> <span class="n">keynames</span><span class="o">=</span><span class="p">[</span><span class="s1">'paramId'</span><span class="p">],</span>
- <span class="n">keyvalues</span><span class="o">=</span><span class="p">[</span><span class="mi">143</span><span class="p">],</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'a'</span><span class="p">)</span>
-
- <span class="k">return</span>
-
-<div class="viewcode-block" id="EcFlexpart.create"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.create">[docs]</a> <span class="k">def</span> <span class="nf">create</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">inputfiles</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''An index file will be created which depends on the combination</span>
-<span class="sd"> of "date", "time" and "stepRange" values. This is used to iterate</span>
-<span class="sd"> over all messages in each grib file which were passed through the</span>
-<span class="sd"> parameter "inputfiles" to seperate specific parameters into fort.*</span>
-<span class="sd"> files. Afterwards the FORTRAN program is called to convert</span>
-<span class="sd"> the data fields all to the same grid and put them in one file</span>
-<span class="sd"> per unique time step (combination of "date", "time" and</span>
-<span class="sd"> "stepRange").</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> This method is based on the ECMWF example index.py</span>
-<span class="sd"> https://software.ecmwf.int/wiki/display/GRIB/index.py</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> inputfiles : UioFiles</span>
-<span class="sd"> Contains a list of files.</span>
-
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="c1"># generate start and end timestamp of the retrieval period</span>
- <span class="n">start_period</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">time</span><span class="p">[</span><span class="mi">0</span><span class="p">],</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">start_period</span> <span class="o">=</span> <span class="n">start_period</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">step</span><span class="p">[</span><span class="mi">0</span><span class="p">]))</span>
- <span class="n">end_period</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">time</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">end_period</span> <span class="o">=</span> <span class="n">end_period</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">step</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span><span class="p">:</span>
- <span class="n">table128</span> <span class="o">=</span> <span class="n">init128</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_GRIBTABLE</span><span class="p">)</span>
- <span class="n">wrfpars</span> <span class="o">=</span> <span class="n">to_param_id</span><span class="p">(</span><span class="s1">'sp/mslp/skt/2t/10u/10v/2d/z/lsm/sst/ci/sd/</span><span class="se">\</span>
-<span class="s1"> stl1/stl2/stl3/stl4/swvl1/swvl2/swvl3/swvl4'</span><span class="p">,</span>
- <span class="n">table128</span><span class="p">)</span>
-
- <span class="c1"># these numbers are indices for the temporary files "fort.xx"</span>
- <span class="c1"># which are used to seperate the grib fields to,</span>
- <span class="c1"># for the Fortran program input</span>
- <span class="c1"># 10: U,V | 11: T | 12: lnsp | 13: D | 16: sfc fields</span>
- <span class="c1"># 17: Q | 18: Q , gaussian| 19: w | 21: etadot | 22: clwc+ciwc</span>
- <span class="n">fdict</span> <span class="o">=</span> <span class="p">{</span><span class="s1">'10'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'11'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'12'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'13'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'16'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span>
- <span class="s1">'17'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'18'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'19'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'21'</span><span class="p">:</span><span class="kc">None</span><span class="p">,</span> <span class="s1">'22'</span><span class="p">:</span><span class="kc">None</span><span class="p">}</span>
-
- <span class="n">iid</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="n">index_vals</span> <span class="o">=</span> <span class="kc">None</span>
-
- <span class="c1"># get the values of the keys which are used for distinct access</span>
- <span class="c1"># of grib messages via product</span>
- <span class="k">if</span> <span class="s1">'/'</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">number</span><span class="p">:</span>
- <span class="c1"># more than one ensemble member is selected</span>
- <span class="n">index_keys</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"number"</span><span class="p">,</span> <span class="s2">"date"</span><span class="p">,</span> <span class="s2">"time"</span><span class="p">,</span> <span class="s2">"step"</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">index_keys</span> <span class="o">=</span> <span class="p">[</span><span class="s2">"date"</span><span class="p">,</span> <span class="s2">"time"</span><span class="p">,</span> <span class="s2">"step"</span><span class="p">]</span>
- <span class="n">iid</span><span class="p">,</span> <span class="n">index_vals</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">_mk_index_values</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span>
- <span class="n">inputfiles</span><span class="p">,</span>
- <span class="n">index_keys</span><span class="p">)</span>
- <span class="c1"># index_vals looks like e.g.:</span>
- <span class="c1"># index_vals[0]: ('20171106', '20171107', '20171108') ; date</span>
- <span class="c1"># index_vals[1]: ('0', '600', '1200', '1800') ; time</span>
- <span class="c1"># index_vals[2]: ('0', '12', '3', '6', '9') ; stepRange</span>
-
- <span class="c1"># "product" genereates each possible combination between the</span>
- <span class="c1"># values of the index keys</span>
- <span class="k">for</span> <span class="n">prod</span> <span class="ow">in</span> <span class="n">product</span><span class="p">(</span><span class="o">*</span><span class="n">index_vals</span><span class="p">):</span>
- <span class="c1"># e.g. prod = ('20170505', '0', '12')</span>
- <span class="c1"># ( date ,time, step)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'current product: '</span><span class="p">,</span> <span class="n">prod</span><span class="p">)</span>
-
- <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">len</span><span class="p">(</span><span class="n">index_keys</span><span class="p">)):</span>
- <span class="n">codes_index_select</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">index_keys</span><span class="p">[</span><span class="n">i</span><span class="p">],</span> <span class="n">prod</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
-
- <span class="c1"># get first id from current product</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_new_from_index</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-
- <span class="c1"># if there is no data for this specific time combination / product</span>
- <span class="c1"># skip the rest of the for loop and start with next timestep/product</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">gid</span><span class="p">:</span>
- <span class="k">continue</span>
-<span class="c1">#============================================================================================</span>
- <span class="c1"># remove old fort.* files and open new ones</span>
- <span class="c1"># they are just valid for a single product</span>
- <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">fdict</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="n">fortfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'fort.'</span> <span class="o">+</span> <span class="n">k</span><span class="p">)</span>
- <span class="n">silent_remove</span><span class="p">(</span><span class="n">fortfile</span><span class="p">)</span>
- <span class="n">fdict</span><span class="p">[</span><span class="n">k</span><span class="p">]</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fortfile</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span>
-<span class="c1">#============================================================================================</span>
- <span class="c1"># create correct timestamp from the three time informations</span>
- <span class="n">cdate</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'date'</span><span class="p">))</span>
- <span class="n">ctime</span> <span class="o">=</span> <span class="s1">'</span><span class="si">{:0>2}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'time'</span><span class="p">)</span><span class="o">/</span><span class="mi">100</span><span class="p">)</span>
- <span class="n">cstep</span> <span class="o">=</span> <span class="s1">'</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'step'</span><span class="p">))</span>
- <span class="n">timestamp</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">cdate</span> <span class="o">+</span> <span class="n">ctime</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">timestamp</span> <span class="o">+=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">cstep</span><span class="p">))</span>
- <span class="n">cdate_hour</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">timestamp</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
-
- <span class="c1"># skip all temporary times</span>
- <span class="c1"># which are outside the retrieval period</span>
- <span class="k">if</span> <span class="n">timestamp</span> <span class="o"><</span> <span class="n">start_period</span> <span class="ow">or</span> \
- <span class="n">timestamp</span> <span class="o">></span> <span class="n">end_period</span><span class="p">:</span>
- <span class="k">continue</span>
-
- <span class="c1"># if the timestamp is out of basetime start/end date period,</span>
- <span class="c1"># skip this specific product</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">time_delta</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="mi">12</span><span class="o">-</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">dtime</span><span class="p">))</span>
- <span class="n">start_time</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">basetime</span><span class="p">),</span>
- <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span> <span class="o">-</span> <span class="n">time_delta</span>
- <span class="n">end_time</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">basetime</span><span class="p">),</span>
- <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">timestamp</span> <span class="o"><</span> <span class="n">start_time</span> <span class="ow">or</span> <span class="n">timestamp</span> <span class="o">></span> <span class="n">end_time</span><span class="p">:</span>
- <span class="k">continue</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span><span class="p">:</span>
- <span class="k">if</span> <span class="s1">'olddate'</span> <span class="ow">not</span> <span class="ow">in</span> <span class="nb">locals</span><span class="p">()</span> <span class="ow">or</span> <span class="n">cdate</span> <span class="o">!=</span> <span class="n">olddate</span><span class="p">:</span>
- <span class="n">fwrf</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">,</span>
- <span class="s1">'WRF'</span> <span class="o">+</span> <span class="n">cdate</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span> <span class="n">ctime</span> <span class="o">+</span> <span class="s1">'.000.grb2'</span><span class="p">),</span> <span class="s1">'w'</span><span class="p">)</span>
- <span class="n">olddate</span> <span class="o">=</span> <span class="n">cdate</span><span class="p">[:]</span>
-<span class="c1">#============================================================================================</span>
- <span class="c1"># savedfields remembers which fields were already used.</span>
- <span class="n">savedfields</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="c1"># sum of cloud liquid and ice water content</span>
- <span class="n">scwc</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">gid</span><span class="p">:</span>
- <span class="k">break</span>
- <span class="n">paramId</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'paramId'</span><span class="p">)</span>
- <span class="n">gridtype</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'gridType'</span><span class="p">)</span>
- <span class="n">levtype</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'typeOfLevel'</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">77</span><span class="p">:</span> <span class="c1"># ETADOT</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'21'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">130</span><span class="p">:</span> <span class="c1"># T</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'11'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">131</span> <span class="ow">or</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">132</span><span class="p">:</span> <span class="c1"># U, V wind component</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'10'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">133</span> <span class="ow">and</span> <span class="n">gridtype</span> <span class="o">!=</span> <span class="s1">'reduced_gg'</span><span class="p">:</span> <span class="c1"># Q</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'17'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">133</span> <span class="ow">and</span> <span class="n">gridtype</span> <span class="o">==</span> <span class="s1">'reduced_gg'</span><span class="p">:</span> <span class="c1"># Q, gaussian</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'18'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">135</span><span class="p">:</span> <span class="c1"># W</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'19'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">152</span><span class="p">:</span> <span class="c1"># LNSP</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'12'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">155</span> <span class="ow">and</span> <span class="n">gridtype</span> <span class="o">==</span> <span class="s1">'sh'</span><span class="p">:</span> <span class="c1"># D</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'13'</span><span class="p">])</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">246</span> <span class="ow">or</span> <span class="n">paramId</span> <span class="o">==</span> <span class="mi">247</span><span class="p">:</span> <span class="c1"># CLWC, CIWC</span>
- <span class="c1"># sum cloud liquid water and ice</span>
- <span class="k">if</span> <span class="n">scwc</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">scwc</span> <span class="o">=</span> <span class="n">codes_get_values</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">scwc</span> <span class="o">+=</span> <span class="n">codes_get_values</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">scwc</span><span class="p">)</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'paramId'</span><span class="p">,</span> <span class="mi">201031</span><span class="p">)</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'22'</span><span class="p">])</span>
- <span class="n">scwc</span> <span class="o">=</span> <span class="kc">None</span>
- <span class="k">elif</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span> <span class="ow">and</span> <span class="n">paramId</span> <span class="ow">in</span> <span class="p">[</span><span class="mi">129</span><span class="p">,</span> <span class="mi">138</span><span class="p">,</span> <span class="mi">155</span><span class="p">]</span> <span class="ow">and</span> \
- <span class="n">levtype</span> <span class="o">==</span> <span class="s1">'hybrid'</span><span class="p">:</span> <span class="c1"># Z, VO, D</span>
- <span class="c1"># do not do anything right now</span>
- <span class="c1"># these are specific parameter for WRF</span>
- <span class="k">pass</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">paramId</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">savedfields</span><span class="p">:</span>
- <span class="c1"># SD/MSL/TCC/10U/10V/2T/2D/Z/LSM/SDOR/CVL/CVH/SR</span>
- <span class="c1"># and all ADDPAR parameter</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fdict</span><span class="p">[</span><span class="s1">'16'</span><span class="p">])</span>
- <span class="n">savedfields</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">paramId</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'duplicate '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">paramId</span><span class="p">)</span> <span class="o">+</span> <span class="s1">' not written'</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span><span class="p">:</span>
- <span class="c1"># model layer</span>
- <span class="k">if</span> <span class="n">levtype</span> <span class="o">==</span> <span class="s1">'hybrid'</span> <span class="ow">and</span> \
- <span class="n">paramId</span> <span class="ow">in</span> <span class="p">[</span><span class="mi">129</span><span class="p">,</span> <span class="mi">130</span><span class="p">,</span> <span class="mi">131</span><span class="p">,</span> <span class="mi">132</span><span class="p">,</span> <span class="mi">133</span><span class="p">,</span> <span class="mi">138</span><span class="p">,</span> <span class="mi">155</span><span class="p">]:</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fwrf</span><span class="p">)</span>
- <span class="c1"># sfc layer</span>
- <span class="k">elif</span> <span class="n">paramId</span> <span class="ow">in</span> <span class="n">wrfpars</span><span class="p">:</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fwrf</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">AttributeError</span><span class="p">:</span>
- <span class="k">pass</span>
-
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_new_from_index</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-<span class="c1">#============================================================================================</span>
- <span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">fdict</span><span class="o">.</span><span class="n">values</span><span class="p">():</span>
- <span class="n">f</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-<span class="c1">#============================================================================================</span>
- <span class="c1"># call for Fortran program to convert e.g. reduced_gg grids to</span>
- <span class="c1"># regular_ll and calculate detadot/dp</span>
- <span class="n">pwd</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">getcwd</span><span class="p">()</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">stat</span><span class="p">(</span><span class="s1">'fort.21'</span><span class="p">)</span><span class="o">.</span><span class="n">st_size</span> <span class="o">==</span> <span class="mi">0</span> <span class="ow">and</span> <span class="n">c</span><span class="o">.</span><span class="n">eta</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Parameter 77 (etadot) is missing, most likely it is '</span>
- <span class="s1">'not available for this type or date / time</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Check parameters CLASS, TYPE, STREAM, START_DATE</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">my_error</span><span class="p">(</span><span class="s1">'fort.21 is empty while parameter eta '</span>
- <span class="s1">'is set to 1 in CONTROL file'</span><span class="p">)</span>
-<span class="c1"># ============================================================================================</span>
- <span class="c1"># write out all output to log file before starting fortran programm</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">stdout</span><span class="o">.</span><span class="n">flush</span><span class="p">()</span>
-
- <span class="c1"># Fortran program creates file fort.15 (with u,v,etadot,t,sp,q)</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">exedir</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FORTRAN_EXECUTABLE</span><span class="p">)],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'FORTRAN PROGRAM FAILED!'</span><span class="p">)</span><span class="c1">#shell=True)</span>
-
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">pwd</span><span class="p">)</span>
-<span class="c1"># ============================================================================================</span>
- <span class="c1"># create name of final output file, e.g. EN13040500 (ENYYMMDDHH)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="n">suffix</span> <span class="o">=</span> <span class="n">cdate</span><span class="p">[</span><span class="mi">2</span><span class="p">:</span><span class="mi">8</span><span class="p">]</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span> <span class="n">ctime</span> <span class="o">+</span> <span class="s1">'.'</span> <span class="o">+</span> <span class="n">cstep</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">suffix</span> <span class="o">=</span> <span class="n">cdate_hour</span><span class="p">[</span><span class="mi">2</span><span class="p">:</span><span class="mi">10</span><span class="p">]</span>
-
- <span class="c1"># if necessary, add ensemble member number to filename suffix</span>
- <span class="k">if</span> <span class="s1">'number'</span> <span class="ow">in</span> <span class="n">index_keys</span><span class="p">:</span>
- <span class="n">index_number</span> <span class="o">=</span> <span class="n">index_keys</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="s1">'number'</span><span class="p">)</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="n">index_number</span><span class="p">])</span> <span class="o">></span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">suffix</span> <span class="o">=</span> <span class="n">suffix</span> <span class="o">+</span> <span class="s1">'.N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">prod</span><span class="p">[</span><span class="n">index_number</span><span class="p">]))</span>
-
- <span class="n">fnout</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span> <span class="o">+</span> <span class="n">suffix</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"outputfile = "</span> <span class="o">+</span> <span class="n">fnout</span><span class="p">)</span>
- <span class="c1"># collect for final processing</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">fnout</span><span class="p">))</span>
- <span class="c1"># get additional precipitation subgrid data if available</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">rrint</span><span class="p">:</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">fnout</span> <span class="o">+</span> <span class="s1">'_1'</span><span class="p">))</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">fnout</span> <span class="o">+</span> <span class="s1">'_2'</span><span class="p">))</span>
-<span class="c1"># ============================================================================================</span>
- <span class="c1"># create outputfile and copy all data from intermediate files</span>
- <span class="c1"># to the outputfile (final GRIB input files for FLEXPART)</span>
- <span class="n">orolsm</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">glob</span><span class="o">.</span><span class="n">glob</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">+</span>
- <span class="s1">'/OG_OROLSM__SL.*.'</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">ppid</span> <span class="o">+</span> <span class="s1">'*'</span><span class="p">)[</span><span class="mi">0</span><span class="p">])</span>
- <span class="n">fluxfile</span> <span class="o">=</span> <span class="s1">'flux'</span> <span class="o">+</span> <span class="n">cdate</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="mi">2</span><span class="p">]</span> <span class="o">+</span> <span class="n">suffix</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">cwc</span><span class="p">:</span>
- <span class="n">flist</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'fort.15'</span><span class="p">,</span> <span class="n">fluxfile</span><span class="p">,</span> <span class="s1">'fort.16'</span><span class="p">,</span> <span class="n">orolsm</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">flist</span> <span class="o">=</span> <span class="p">[</span><span class="s1">'fort.15'</span><span class="p">,</span> <span class="s1">'fort.22'</span><span class="p">,</span> <span class="n">fluxfile</span><span class="p">,</span> <span class="s1">'fort.16'</span><span class="p">,</span> <span class="n">orolsm</span><span class="p">]</span>
-
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">fnout</span><span class="p">,</span> <span class="s1">'wb'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fout</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">flist</span><span class="p">:</span>
- <span class="n">shutil</span><span class="o">.</span><span class="n">copyfileobj</span><span class="p">(</span><span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">f</span><span class="p">),</span> <span class="s1">'rb'</span><span class="p">),</span>
- <span class="n">fout</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">omega</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">,</span> <span class="s1">'OMEGA'</span><span class="p">),</span> <span class="s1">'wb'</span><span class="p">)</span> <span class="k">as</span> <span class="n">fout</span><span class="p">:</span>
- <span class="n">shutil</span><span class="o">.</span><span class="n">copyfileobj</span><span class="p">(</span><span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'fort.25'</span><span class="p">),</span>
- <span class="s1">'rb'</span><span class="p">),</span> <span class="n">fout</span><span class="p">)</span>
-<span class="c1"># ============================================================================================</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">wrf</span><span class="p">:</span>
- <span class="n">fwrf</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="n">codes_index_release</span><span class="p">(</span><span class="n">iid</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="EcFlexpart.calc_extra_elda"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.calc_extra_elda">[docs]</a> <span class="k">def</span> <span class="nf">calc_extra_elda</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">path</span><span class="p">,</span> <span class="n">prefix</span><span class="p">):</span>
- <span class="sd">''' Calculates extra ensemble members for ELDA - Stream.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> path : str</span>
-<span class="sd"> Path to the output files.</span>
-
-<span class="sd"> prefix : str</span>
-<span class="sd"> The prefix of the output filenames as defined in Control file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># max number</span>
- <span class="n">maxnum</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">number</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="o">-</span><span class="mi">1</span><span class="p">])</span>
-
- <span class="c1"># get a list of all prepared output files with control forecast (CF)</span>
- <span class="n">CF_filelist</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">path</span><span class="p">,</span> <span class="n">prefix</span> <span class="o">+</span> <span class="s1">'*.N000'</span><span class="p">)</span>
-
- <span class="k">for</span> <span class="n">cffile</span> <span class="ow">in</span> <span class="n">CF_filelist</span><span class="o">.</span><span class="n">files</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">cffile</span><span class="p">,</span> <span class="s1">'rb'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">cfvalues</span><span class="o">=</span><span class="p">[]</span>
- <span class="k">while</span> <span class="kc">True</span><span class="p">:</span>
- <span class="n">fid</span> <span class="o">=</span> <span class="n">codes_grib_new_from_file</span><span class="p">(</span><span class="n">f</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">fid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
- <span class="n">cfvalues</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">codes_get_array</span><span class="p">(</span><span class="n">fid</span><span class="p">,</span> <span class="s1">'values'</span><span class="p">))</span>
- <span class="n">codes_release</span><span class="p">(</span><span class="n">fid</span><span class="p">)</span>
-
- <span class="n">filename</span> <span class="o">=</span> <span class="n">cffile</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'N000'</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">maxnum</span><span class="o">+</span><span class="mi">1</span><span class="p">):</span> <span class="c1"># max number nehmen</span>
-
- <span class="c1"># read an ensemble member</span>
- <span class="n">g</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename</span> <span class="o">+</span> <span class="s1">'N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">i</span><span class="p">),</span> <span class="s1">'rb'</span><span class="p">)</span>
- <span class="c1"># create file for newly calculated ensemble member</span>
- <span class="n">h</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename</span> <span class="o">+</span> <span class="s1">'N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">i</span><span class="o">+</span><span class="n">maxnum</span><span class="p">),</span> <span class="s1">'wb'</span><span class="p">)</span>
- <span class="c1"># number of message in grib file</span>
- <span class="n">j</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">while</span> <span class="kc">True</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_grib_new_from_file</span><span class="p">(</span><span class="n">g</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
- <span class="n">values</span> <span class="o">=</span> <span class="n">codes_get_array</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'values'</span><span class="p">)</span>
- <span class="n">codes_set_array</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'values'</span><span class="p">,</span>
- <span class="n">values</span><span class="o">-</span><span class="mi">2</span><span class="o">*</span><span class="p">(</span><span class="n">values</span><span class="o">-</span><span class="n">cfvalues</span><span class="p">[</span><span class="n">j</span><span class="p">]))</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="s1">'number'</span><span class="p">,</span> <span class="n">i</span><span class="o">+</span><span class="n">maxnum</span><span class="p">)</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">h</span><span class="p">)</span>
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
- <span class="n">j</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="n">g</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">h</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'wrote '</span> <span class="o">+</span> <span class="n">filename</span> <span class="o">+</span> <span class="s1">'N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">i</span><span class="o">+</span><span class="n">maxnum</span><span class="p">))</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="o">.</span><span class="n">append</span><span class="p">(</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">filename</span> <span class="o">+</span> <span class="s1">'N</span><span class="si">{:0>3}</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">i</span><span class="o">+</span><span class="n">maxnum</span><span class="p">)))</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="EcFlexpart.process_output"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.process_output">[docs]</a> <span class="k">def</span> <span class="nf">process_output</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Postprocessing of FLEXPART input files.</span>
-
-<span class="sd"> The grib files are postprocessed depending on the selection in</span>
-<span class="sd"> CONTROL file. The resulting files are moved to the output</span>
-<span class="sd"> directory if its not equal to the input directory.</span>
-<span class="sd"> The following modifications might be done if</span>
-<span class="sd"> properly switched in CONTROL file:</span>
-<span class="sd"> GRIB2 - Conversion to GRIB2</span>
-<span class="sd"> ECTRANS - Transfer of files to gateway server</span>
-<span class="sd"> ECSTORAGE - Storage at ECMWF server</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n\n</span><span class="s1">Postprocessing:</span><span class="se">\n</span><span class="s1"> Format: </span><span class="si">{}</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">format</span><span class="p">))</span>
-
- <span class="k">if</span> <span class="n">_config</span><span class="o">.</span><span class="n">FLAG_ON_ECMWFSERVER</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'ecstorage: </span><span class="si">{}</span><span class="se">\n</span><span class="s1"> ecfsdir: </span><span class="si">{}</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span>
- <span class="nb">format</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ecstorage</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecfsdir</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'ectrans: </span><span class="si">{}</span><span class="se">\n</span><span class="s1"> gateway: </span><span class="si">{}</span><span class="se">\n</span><span class="s1"> destination: </span><span class="si">{}</span><span class="se">\n</span><span class="s1"> '</span>
- <span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ectrans</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Output filelist: '</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="p">)</span>
-
- <span class="k">for</span> <span class="n">ofile</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="p">:</span>
- <span class="n">ofile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">ofile</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">format</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'grib2'</span><span class="p">:</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'grib_set'</span><span class="p">,</span> <span class="s1">'-s'</span><span class="p">,</span> <span class="s1">'edition=2,'</span> <span class="o">+</span>
- <span class="s1">'productDefinitionTemplateNumber=8'</span><span class="p">,</span>
- <span class="n">ofile</span><span class="p">,</span> <span class="n">ofile</span> <span class="o">+</span> <span class="s1">'_2'</span><span class="p">],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'GRIB2 CONVERSION FAILED!'</span><span class="p">)</span>
-
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'mv'</span><span class="p">,</span> <span class="n">ofile</span> <span class="o">+</span> <span class="s1">'_2'</span><span class="p">,</span> <span class="n">ofile</span><span class="p">],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'RENAMING FOR NEW GRIB2 FORMAT '</span>
- <span class="s1">'FILES FAILED!'</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">ectrans</span> <span class="ow">and</span> <span class="n">_config</span><span class="o">.</span><span class="n">FLAG_ON_ECMWFSERVER</span><span class="p">:</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'ectrans'</span><span class="p">,</span> <span class="s1">'-overwrite'</span><span class="p">,</span> <span class="s1">'-gateway'</span><span class="p">,</span>
- <span class="n">c</span><span class="o">.</span><span class="n">gateway</span><span class="p">,</span> <span class="s1">'-remote'</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">,</span>
- <span class="s1">'-source'</span><span class="p">,</span> <span class="n">ofile</span><span class="p">],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'TRANSFER TO LOCAL SERVER FAILED!'</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">ecstorage</span> <span class="ow">and</span> <span class="n">_config</span><span class="o">.</span><span class="n">FLAG_ON_ECMWFSERVER</span><span class="p">:</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'ecp'</span><span class="p">,</span> <span class="s1">'-o'</span><span class="p">,</span> <span class="n">ofile</span><span class="p">,</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ecfsdir</span><span class="p">)],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'COPY OF FILES TO ECSTORAGE '</span>
- <span class="s1">'AREA FAILED!'</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">outputdir</span> <span class="o">!=</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">:</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'mv'</span><span class="p">,</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">ofile</span><span class="p">),</span>
- <span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">],</span>
- <span class="n">error_msg</span><span class="o">=</span><span class="s1">'RELOCATION OF OUTPUT FILES '</span>
- <span class="s1">'TO OUTPUTDIR FAILED!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="EcFlexpart.prepare_fp_files"><a class="viewcode-back" href="../api.html#EcFlexpart.EcFlexpart.prepare_fp_files">[docs]</a> <span class="k">def</span> <span class="nf">prepare_fp_files</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Conversion of GRIB files to FLEXPART binary format.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># generate AVAILABLE file</span>
- <span class="c1"># Example of AVAILABLE file data:</span>
- <span class="c1"># 20131107 000000 EN13110700 ON DISC</span>
- <span class="n">clist</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">ofile</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">outputfilelist</span><span class="p">:</span>
- <span class="n">fname</span> <span class="o">=</span> <span class="n">ofile</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
- <span class="k">if</span> <span class="s1">'.'</span> <span class="ow">in</span> <span class="n">fname</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]:</span>
- <span class="n">l</span> <span class="o">=</span> <span class="n">fname</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'.'</span><span class="p">)</span>
- <span class="n">timestamp</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">l</span><span class="p">[</span><span class="mi">0</span><span class="p">][</span><span class="o">-</span><span class="mi">6</span><span class="p">:]</span> <span class="o">+</span> <span class="n">l</span><span class="p">[</span><span class="mi">1</span><span class="p">],</span>
- <span class="s1">'%y%m</span><span class="si">%d</span><span class="s1">%H'</span><span class="p">)</span>
- <span class="n">timestamp</span> <span class="o">+=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">hours</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">l</span><span class="p">[</span><span class="mi">2</span><span class="p">]))</span>
- <span class="n">cdate</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">timestamp</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">chms</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="n">timestamp</span><span class="p">,</span> <span class="s1">'%H%M%S'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">cdate</span> <span class="o">=</span> <span class="s1">'20'</span> <span class="o">+</span> <span class="n">fname</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">][</span><span class="o">-</span><span class="mi">8</span><span class="p">:</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span>
- <span class="n">chms</span> <span class="o">=</span> <span class="n">fname</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">][</span><span class="o">-</span><span class="mi">2</span><span class="p">:]</span> <span class="o">+</span> <span class="s1">'0000'</span>
- <span class="n">clist</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">cdate</span> <span class="o">+</span> <span class="s1">' '</span> <span class="o">+</span> <span class="n">chms</span> <span class="o">+</span> <span class="s1">' '</span><span class="o">*</span><span class="mi">6</span> <span class="o">+</span>
- <span class="n">fname</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> <span class="s1">' '</span><span class="o">*</span><span class="mi">14</span> <span class="o">+</span> <span class="s1">'ON DISC'</span><span class="p">)</span>
- <span class="n">clist</span><span class="o">.</span><span class="n">sort</span><span class="p">()</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span> <span class="o">+</span> <span class="s1">'/'</span> <span class="o">+</span> <span class="s1">'AVAILABLE'</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">clist</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="c1"># generate pathnames file</span>
- <span class="n">pwd</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">)</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/pathnames'</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/Options/</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/AVAILABLE</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">' = == = == = == = == = == == = </span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="c1"># create Options dir if necessary</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/Options'</span><span class="p">):</span>
- <span class="n">make_dir</span><span class="p">(</span><span class="n">pwd</span><span class="o">+</span><span class="s1">'/Options'</span><span class="p">)</span>
-
- <span class="c1"># read template COMMAND file</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expanduser</span><span class="p">(</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">))</span> <span class="o">+</span> <span class="s1">'/../Options/COMMAND'</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">lflist</span> <span class="o">=</span> <span class="n">f</span><span class="o">.</span><span class="n">read</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="c1"># find index of list where to put in the</span>
- <span class="c1"># date and time information</span>
- <span class="c1"># usually after the LDIRECT parameter</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">l</span> <span class="ow">in</span> <span class="n">lflist</span><span class="p">:</span>
- <span class="k">if</span> <span class="s1">'LDIRECT'</span> <span class="ow">in</span> <span class="n">l</span><span class="o">.</span><span class="n">upper</span><span class="p">():</span>
- <span class="k">break</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="c1"># insert the date and time information of run start and end</span>
- <span class="c1"># into the list of lines of COMMAND file</span>
- <span class="n">lflist</span> <span class="o">=</span> <span class="n">lflist</span><span class="p">[:</span><span class="n">i</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> \
- <span class="p">[</span><span class="n">clist</span><span class="p">[</span><span class="mi">0</span><span class="p">][:</span><span class="mi">16</span><span class="p">],</span> <span class="n">clist</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">][:</span><span class="mi">16</span><span class="p">]]</span> <span class="o">+</span> \
- <span class="n">lflist</span><span class="p">[</span><span class="n">i</span><span class="o">+</span><span class="mi">3</span><span class="p">:]</span>
-
- <span class="c1"># write the new COMMAND file</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">pwd</span> <span class="o">+</span> <span class="s1">'/Options/COMMAND'</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">g</span><span class="p">:</span>
- <span class="n">g</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">lflist</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="c1"># change to outputdir and start the grib2flexpart run</span>
- <span class="c1"># afterwards switch back to the working dir</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">)</span>
- <span class="n">cmd</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expanduser</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">))</span> <span class="o">+</span>
- <span class="s1">'/../FLEXPART_PROGRAM/grib2flexpart'</span><span class="p">,</span> <span class="s1">'useAvailable'</span><span class="p">,</span> <span class="s1">'.'</span><span class="p">]</span>
- <span class="n">execute_subprocess</span><span class="p">(</span><span class="n">cmd</span><span class="p">)</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">pwd</span><span class="p">)</span>
-
- <span class="k">return</span></div></div>
-</pre></div>
-
- </div>
-
- </div>
- <footer>
-
-
- <hr/>
-
- <div role="contentinfo">
- <p>
- © Copyright 2018, Anne Philipp and Leopold Haimberger.
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- Built with <a href="http://sphinx-doc.org/">Sphinx</a> using a <a href="https://github.com/rtfd/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
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- <script type="text/javascript">
- var DOCUMENTATION_OPTIONS = {
- URL_ROOT:'../',
- VERSION:'7.1 alpha',
- LANGUAGE:'None',
- COLLAPSE_INDEX:false,
- FILE_SUFFIX:'.html',
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- SOURCELINK_SUFFIX: '.txt'
- };
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deleted file mode 100644
index bd21ed579cd171907858bc4ac8169481e273a40a..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_modules/GribTools.html
+++ /dev/null
@@ -1,535 +0,0 @@
-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
-<head>
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- <title>GribTools — flex_extract 7.1 alpha documentation</title>
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- <a href="../index.html" class="icon icon-home"> flex_extract
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- 7.1
- </div>
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-<div role="search">
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- <input type="text" name="q" placeholder="Search docs" />
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- <p class="caption"><span class="caption-text">Table of Contents:</span></p>
-<ul>
-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../user_guide.html">User Guide</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../api.html">Auto Generated Documentation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../support.html">Support</a></li>
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-
- <h1>Source code for GribTools</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: July 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - changed some naming</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2018.</span>
-<span class="c1">#</span>
-<span class="c1"># This software is licensed under the terms of the Apache Licence Version 2.0</span>
-<span class="c1"># which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Description:</span>
-<span class="c1"># The GRIB API provides all necessary tools to work directly with the</span>
-<span class="c1"># grib files. Nevertheless, the GRIB API tools are very basic and are in</span>
-<span class="c1"># direct connection with the grib files. This class provides some higher</span>
-<span class="c1"># functions which apply a set of GRIB API tools together in the respective</span>
-<span class="c1"># context. So, the class initially contains a list of grib files (their</span>
-<span class="c1"># names) and the using program then applies the methods directly on the</span>
-<span class="c1"># class objects without having to think about how the actual GRIB API</span>
-<span class="c1"># tools have to be arranged.</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Content:</span>
-<span class="c1"># - __init__</span>
-<span class="c1"># - get_keys</span>
-<span class="c1"># - set_keys</span>
-<span class="c1"># - copy</span>
-<span class="c1"># - index</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Attributes:</span>
-<span class="c1"># - filenames</span>
-<span class="c1">#</span>
-<span class="c1">#*******************************************************************************</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">from</span> <span class="nn">gribapi</span> <span class="k">import</span> <span class="n">grib_new_from_file</span><span class="p">,</span> <span class="n">grib_is_defined</span><span class="p">,</span> <span class="n">grib_get</span><span class="p">,</span> \
- <span class="n">grib_release</span><span class="p">,</span> <span class="n">grib_set</span><span class="p">,</span> <span class="n">grib_write</span><span class="p">,</span> <span class="n">grib_index_read</span><span class="p">,</span> \
- <span class="n">grib_index_new_from_file</span><span class="p">,</span> <span class="n">grib_index_add_file</span><span class="p">,</span> \
- <span class="n">grib_index_write</span>
-
-
-<span class="c1"># from eccodes import (codes_grib_new_from_file, codes_is_defined, codes_get,</span>
- <span class="c1"># codes_release, codes_set, codes_write, codes_index_read,</span>
- <span class="c1"># codes_index_new_from_file, codes_index_add_file,</span>
- <span class="c1"># codes_index_write)</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="GribTools"><a class="viewcode-back" href="../api.html#GribTools.GribTools">[docs]</a><span class="k">class</span> <span class="nc">GribTools</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''</span>
-<span class="sd"> Class for GRIB utilities (new methods) based on GRIB API</span>
-<span class="sd"> '''</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="c1"># CLASS FUNCTIONS</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">filenames</span><span class="p">):</span>
- <span class="sd">'''Initialise an object of GribTools and assign a list of filenames.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filenames : :obj:`list` of :obj:`strings`</span>
-<span class="sd"> A list of filenames.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">filenames</span> <span class="o">=</span> <span class="n">filenames</span>
-
- <span class="k">return</span>
-
-
-<div class="viewcode-block" id="GribTools.get_keys"><a class="viewcode-back" href="../api.html#GribTools.GribTools.get_keys">[docs]</a> <span class="k">def</span> <span class="nf">get_keys</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">keynames</span><span class="p">,</span> <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[]):</span>
- <span class="sd">'''Get keyvalues for a given list of keynames a where statement</span>
-<span class="sd"> can be given (list of key and list of values)</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> keynames : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keynames.</span>
-
-<span class="sd"> wherekeynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> wherekeyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> return_list : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keyvalues for given keynames.</span>
-<span class="sd"> '''</span>
-
- <span class="n">fileid</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span>
-
- <span class="n">return_list</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">grib_new_from_file</span><span class="p">(</span><span class="n">fileid</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Number of key values and key names must be </span><span class="se">\</span>
-<span class="s2"> the same. Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">wherekey</span> <span class="ow">in</span> <span class="n">wherekeynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">grib_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"where key was not defined"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">grib_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">llist</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="n">llist</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="nb">str</span><span class="p">(</span><span class="n">grib_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))])</span>
- <span class="n">return_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">llist</span><span class="p">)</span>
-
- <span class="n">grib_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fileid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span> <span class="n">return_list</span></div>
-
-
-<div class="viewcode-block" id="GribTools.set_keys"><a class="viewcode-back" href="../api.html#GribTools.GribTools.set_keys">[docs]</a> <span class="k">def</span> <span class="nf">set_keys</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">fromfile</span><span class="p">,</span> <span class="n">keynames</span><span class="p">,</span> <span class="n">keyvalues</span><span class="p">,</span> <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[],</span>
- <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[],</span> <span class="n">strict</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">):</span>
- <span class="sd">'''Opens the file to read the grib messages and then write</span>
-<span class="sd"> them to a new output file. By default all messages are</span>
-<span class="sd"> written out. Also, the keyvalues of the passed list of</span>
-<span class="sd"> keynames are set or only those meeting the where statement.</span>
-<span class="sd"> (list of key and list of values).</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> fromfile : :obj:`string`</span>
-<span class="sd"> Filename of the input file to read the grib messages from.</span>
-
-<span class="sd"> keynames : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keynames. Default is an empty list.</span>
-
-<span class="sd"> keyvalues : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keynames. Default is an empty list.</span>
-
-<span class="sd"> wherekeynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> wherekeyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> strict : :obj:`boolean`, optional</span>
-<span class="sd"> Decides if everything from keynames and keyvalues</span>
-<span class="sd"> is written out the grib file (False) or only those</span>
-<span class="sd"> meeting the where statement (True). Default is False.</span>
-
-<span class="sd"> filemode : :obj:`string`, optional</span>
-<span class="sd"> Sets the mode for the output file. Default is "w".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">fout</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="n">filemode</span><span class="p">)</span>
- <span class="n">fin</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fromfile</span><span class="p">)</span>
-
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">grib_new_from_file</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">wherekey</span> <span class="ow">in</span> <span class="n">wherekeynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">grib_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"where Key was not defined"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">grib_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="n">grib_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">,</span> <span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="n">grib_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fout</span><span class="p">)</span>
-
- <span class="n">grib_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fin</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">fout</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="GribTools.copy"><a class="viewcode-back" href="../api.html#GribTools.GribTools.copy">[docs]</a> <span class="k">def</span> <span class="nf">copy</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">filename_in</span><span class="p">,</span> <span class="n">selectWhere</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[],</span> <span class="n">keyvalues</span><span class="o">=</span><span class="p">[],</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">):</span>
- <span class="sd">'''Add the content of another input grib file to the objects file but</span>
-<span class="sd"> only messages corresponding to keys/values passed to the function.</span>
-<span class="sd"> The selectWhere switch decides if to copy the keys equal to (True) or</span>
-<span class="sd"> different to (False) the keynames/keyvalues list passed to the function.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filename_in : :obj:`string`</span>
-<span class="sd"> Filename of the input file to read the grib messages from.</span>
-
-<span class="sd"> selectWhere : :obj:`boolean`, optional</span>
-<span class="sd"> Decides if to copy the keynames and values equal to (True) or</span>
-<span class="sd"> different to (False) the keynames/keyvalues list passed to the</span>
-<span class="sd"> function. Default is True.</span>
-
-<span class="sd"> keynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keynames. Default is an empty list.</span>
-
-<span class="sd"> keyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keynames. Default is an empty list.</span>
-
-<span class="sd"> filemode : :obj:`string`, optional</span>
-<span class="sd"> Sets the mode for the output file. Default is "w".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">fin</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename_in</span><span class="p">)</span>
- <span class="n">fout</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="n">filemode</span><span class="p">)</span>
-
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">grib_new_from_file</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">keynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">grib_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Key was not defined"</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">selectWhere</span><span class="p">:</span>
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">grib_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">!=</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">grib_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">grib_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fout</span><span class="p">)</span>
-
- <span class="n">grib_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fin</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">fout</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="GribTools.index"><a class="viewcode-back" href="../api.html#GribTools.GribTools.index">[docs]</a> <span class="k">def</span> <span class="nf">index</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">index_keys</span><span class="o">=</span><span class="p">[</span><span class="s2">"mars"</span><span class="p">],</span> <span class="n">index_file</span><span class="o">=</span><span class="s2">"my.idx"</span><span class="p">):</span>
- <span class="sd">'''Create index file from a list of files if it does not exist or</span>
-<span class="sd"> read an index file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> index_keys: :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Contains the list of key parameter names from</span>
-<span class="sd"> which the index is to be created.</span>
-<span class="sd"> Default is a list with a single entry string "mars".</span>
-
-<span class="sd"> index_file: :obj:`string`, optional</span>
-<span class="sd"> Filename where the indices are stored.</span>
-<span class="sd"> Default is "my.idx".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> iid: :obj:`integer`</span>
-<span class="sd"> Grib index id.</span>
-<span class="sd"> '''</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... index will be done"</span><span class="p">)</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="kc">None</span>
-
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">index_file</span><span class="p">):</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="n">grib_index_read</span><span class="p">(</span><span class="n">index_file</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Use existing index file: </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">index_file</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">filename</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Inputfile: </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">filename</span><span class="p">))</span>
- <span class="k">if</span> <span class="n">iid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="n">grib_index_new_from_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">index_keys</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">grib_index_add_file</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">filename</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">iid</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">grib_index_write</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">index_file</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... index done'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">iid</span></div></div>
-</pre></div>
-
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-
- <h1>Source code for GribUtil</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: July 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - changed some naming</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2018.</span>
-<span class="c1">#</span>
-<span class="c1"># This software is licensed under the terms of the Apache Licence Version 2.0</span>
-<span class="c1"># which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Description:</span>
-<span class="c1"># The GRIB API provides all necessary tools to work directly with the</span>
-<span class="c1"># grib files. Nevertheless, the GRIB API tools are very basic and are in</span>
-<span class="c1"># direct connection with the grib files. This class provides some higher</span>
-<span class="c1"># functions which apply a set of GRIB API tools together in the respective</span>
-<span class="c1"># context. So, the class initially contains a list of grib files (their</span>
-<span class="c1"># names) and the using program then applies the methods directly on the</span>
-<span class="c1"># class objects without having to think about how the actual GRIB API</span>
-<span class="c1"># tools have to be arranged.</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Content:</span>
-<span class="c1"># - __init__</span>
-<span class="c1"># - get_keys</span>
-<span class="c1"># - set_keys</span>
-<span class="c1"># - copy_dummy_msg</span>
-<span class="c1"># - index</span>
-<span class="c1">#</span>
-<span class="c1"># @Class Attributes:</span>
-<span class="c1"># - filenames</span>
-<span class="c1">#</span>
-<span class="c1">#*******************************************************************************</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-
-<span class="kn">from</span> <span class="nn">eccodes</span> <span class="k">import</span> <span class="p">(</span><span class="n">codes_grib_new_from_file</span><span class="p">,</span> <span class="n">codes_is_defined</span><span class="p">,</span> <span class="n">codes_get</span><span class="p">,</span>
- <span class="n">codes_release</span><span class="p">,</span> <span class="n">codes_set</span><span class="p">,</span> <span class="n">codes_write</span><span class="p">,</span> <span class="n">codes_index_read</span><span class="p">,</span>
- <span class="n">codes_index_new_from_file</span><span class="p">,</span> <span class="n">codes_index_add_file</span><span class="p">,</span>
- <span class="n">codes_index_write</span><span class="p">,</span> <span class="n">codes_set_values</span><span class="p">)</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="GribUtil"><a class="viewcode-back" href="../api.html#GribUtil.GribUtil">[docs]</a><span class="k">class</span> <span class="nc">GribUtil</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''</span>
-<span class="sd"> Class for GRIB utilities (new methods) based on GRIB API</span>
-<span class="sd"> '''</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="c1"># CLASS FUNCTIONS</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">filenames</span><span class="p">):</span>
- <span class="sd">'''Initialise an object of GribUtil and assign a list of filenames.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filenames : :obj:`list` of :obj:`strings`</span>
-<span class="sd"> A list of filenames.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">filenames</span> <span class="o">=</span> <span class="n">filenames</span>
-
- <span class="k">return</span>
-
-
-<div class="viewcode-block" id="GribUtil.get_keys"><a class="viewcode-back" href="../api.html#GribUtil.GribUtil.get_keys">[docs]</a> <span class="k">def</span> <span class="nf">get_keys</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">keynames</span><span class="p">,</span> <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[],</span> <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[]):</span>
- <span class="sd">'''Get keyvalues for a given list of keynames a where statement</span>
-<span class="sd"> can be given (list of key and list of values)</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> keynames : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keynames.</span>
-
-<span class="sd"> wherekeynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> wherekeyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> return_list : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keyvalues for given keynames.</span>
-<span class="sd"> '''</span>
-
- <span class="n">fileid</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span>
-
- <span class="n">return_list</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_new_from_file</span><span class="p">(</span><span class="n">fileid</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Number of key values and key names must be </span><span class="se">\</span>
-<span class="s2"> the same. Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">wherekey</span> <span class="ow">in</span> <span class="n">wherekeynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">codes_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"where key was not defined"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">llist</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="n">llist</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))])</span>
- <span class="n">return_list</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">llist</span><span class="p">)</span>
-
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fileid</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span> <span class="n">return_list</span></div>
-
-
-<div class="viewcode-block" id="GribUtil.set_keys"><a class="viewcode-back" href="../api.html#GribUtil.GribUtil.set_keys">[docs]</a> <span class="k">def</span> <span class="nf">set_keys</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">fromfile</span><span class="p">,</span> <span class="n">keynames</span><span class="p">,</span> <span class="n">keyvalues</span><span class="p">,</span> <span class="n">wherekeynames</span><span class="o">=</span><span class="p">[],</span>
- <span class="n">wherekeyvalues</span><span class="o">=</span><span class="p">[],</span> <span class="n">strict</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">):</span>
- <span class="sd">'''Opens the file to read the grib messages and then write</span>
-<span class="sd"> the selected messages (with wherekeys) to a new output file.</span>
-<span class="sd"> Also, the keyvalues of the passed list of keynames are set.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> fromfile : :obj:`string`</span>
-<span class="sd"> Filename of the input file to read the grib messages from.</span>
-
-<span class="sd"> keynames : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keynames to set in the selected messages.</span>
-<span class="sd"> Default is an empty list.</span>
-
-<span class="sd"> keyvalues : :obj:`list` of :obj:`string`</span>
-<span class="sd"> List of keyvalues to set in the selected messages.</span>
-<span class="sd"> Default is an empty list.</span>
-
-<span class="sd"> wherekeynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keynames to select correct message.</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> wherekeyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keyvalues for keynames to select correct message.</span>
-<span class="sd"> Default value is an empty list.</span>
-
-<span class="sd"> strict : :obj:`boolean`, optional</span>
-<span class="sd"> Decides if everything from keynames and keyvalues</span>
-<span class="sd"> is written out the grib file (False) or only those</span>
-<span class="sd"> meeting the where statement (True). Default is False.</span>
-
-<span class="sd"> filemode : :obj:`string`, optional</span>
-<span class="sd"> Sets the mode for the output file. Default is "w".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">fout</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="n">filemode</span><span class="p">)</span>
- <span class="n">fin</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">fromfile</span><span class="p">)</span>
-
- <span class="k">while</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_grib_new_from_file</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">wherekey</span> <span class="ow">in</span> <span class="n">wherekeynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">codes_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"wherekey was not defined"</span><span class="p">)</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">wherekeyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">wherekey</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">key</span> <span class="o">==</span> <span class="s1">'values'</span><span class="p">:</span>
- <span class="n">codes_set_values</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">codes_set</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">,</span> <span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fout</span><span class="p">)</span>
-
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fin</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">fout</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="GribUtil.copy_dummy_msg"><a class="viewcode-back" href="../api.html#GribUtil.GribUtil.copy_dummy_msg">[docs]</a> <span class="k">def</span> <span class="nf">copy_dummy_msg</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">filename_in</span><span class="p">,</span> <span class="n">selectWhere</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
- <span class="n">keynames</span><span class="o">=</span><span class="p">[],</span> <span class="n">keyvalues</span><span class="o">=</span><span class="p">[],</span> <span class="n">filemode</span><span class="o">=</span><span class="s1">'w'</span><span class="p">):</span>
- <span class="sd">'''Add the content of another input grib file to the objects file but</span>
-<span class="sd"> only messages corresponding to keys/values passed to the function.</span>
-<span class="sd"> The selectWhere switch decides if to copy the keys equal to (True) or</span>
-<span class="sd"> different to (False) the keynames/keyvalues list passed to the function.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filename_in : :obj:`string`</span>
-<span class="sd"> Filename of the input file to read the grib messages from.</span>
-
-<span class="sd"> selectWhere : :obj:`boolean`, optional</span>
-<span class="sd"> Decides if to copy the keynames and values equal to (True) or</span>
-<span class="sd"> different to (False) the keynames/keyvalues list passed to the</span>
-<span class="sd"> function. Default is True.</span>
-
-<span class="sd"> keynames : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keynames. Default is an empty list.</span>
-
-<span class="sd"> keyvalues : :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> List of keyvalues. Default is an empty list.</span>
-
-<span class="sd"> filemode : :obj:`string`, optional</span>
-<span class="sd"> Sets the mode for the output file. Default is "w".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="nb">len</span><span class="p">(</span><span class="n">keynames</span><span class="p">)</span> <span class="o">!=</span> <span class="nb">len</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Give a value for each keyname!"</span><span class="p">)</span>
-
- <span class="n">fin</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename_in</span><span class="p">)</span>
- <span class="n">fout</span> <span class="o">=</span> <span class="nb">open</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">,</span> <span class="n">filemode</span><span class="p">)</span>
-
- <span class="n">fields</span> <span class="o">=</span> <span class="mi">0</span>
-
- <span class="k">while</span> <span class="n">fields</span> <span class="o"><</span> <span class="mi">1</span><span class="p">:</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_grib_new_from_file</span><span class="p">(</span><span class="n">fin</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">gid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">break</span>
-
- <span class="n">select</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="n">i</span> <span class="o">=</span> <span class="mi">0</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keynames</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">codes_is_defined</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">):</span>
- <span class="k">raise</span> <span class="ne">Exception</span><span class="p">(</span><span class="s2">"Key was not defined"</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">selectWhere</span><span class="p">:</span>
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">==</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">select</span> <span class="o">=</span> <span class="p">(</span><span class="n">select</span> <span class="ow">and</span> <span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">keyvalues</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="o">!=</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">key</span><span class="p">))))</span>
- <span class="n">i</span> <span class="o">+=</span> <span class="mi">1</span>
-
- <span class="k">if</span> <span class="n">select</span><span class="p">:</span>
- <span class="n">fields</span> <span class="o">=</span> <span class="n">fields</span> <span class="o">+</span> <span class="mi">1</span>
- <span class="n">codes_write</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span> <span class="n">fout</span><span class="p">)</span>
-
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="n">fin</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
- <span class="n">fout</span><span class="o">.</span><span class="n">close</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="GribUtil.index"><a class="viewcode-back" href="../api.html#GribUtil.GribUtil.index">[docs]</a> <span class="k">def</span> <span class="nf">index</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">index_keys</span><span class="o">=</span><span class="p">[</span><span class="s2">"mars"</span><span class="p">],</span> <span class="n">index_file</span><span class="o">=</span><span class="s2">"my.idx"</span><span class="p">):</span>
- <span class="sd">'''Create index file from a list of files if it does not exist or</span>
-<span class="sd"> read an index file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> index_keys: :obj:`list` of :obj:`string`, optional</span>
-<span class="sd"> Contains the list of key parameter names from</span>
-<span class="sd"> which the index is to be created.</span>
-<span class="sd"> Default is a list with a single entry string "mars".</span>
-
-<span class="sd"> index_file: :obj:`string`, optional</span>
-<span class="sd"> Filename where the indices are stored.</span>
-<span class="sd"> Default is "my.idx".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> iid: :obj:`integer`</span>
-<span class="sd"> Grib index id.</span>
-<span class="sd"> '''</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... index will be done"</span><span class="p">)</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="kc">None</span>
-
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">index_file</span><span class="p">):</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="n">codes_index_read</span><span class="p">(</span><span class="n">index_file</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Use existing index file: </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">index_file</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">filename</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">filenames</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Inputfile: </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">filename</span><span class="p">))</span>
- <span class="k">if</span> <span class="n">iid</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">iid</span> <span class="o">=</span> <span class="n">codes_index_new_from_file</span><span class="p">(</span><span class="n">filename</span><span class="p">,</span> <span class="n">index_keys</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">codes_index_add_file</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">filename</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">iid</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
- <span class="n">codes_index_write</span><span class="p">(</span><span class="n">iid</span><span class="p">,</span> <span class="n">index_file</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... index done'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">iid</span></div></div>
-</pre></div>
-
- </div>
-
- </div>
- <footer>
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- <p>
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-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
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-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
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-
- <h1>Source code for MarsRetrieval</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - optimized display_info</span>
-<span class="c1"># - optimized data_retrieve and seperate between python and shell</span>
-<span class="c1"># script call</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - applied some minor modifications in programming style/structure</span>
-<span class="c1"># - added writing of mars request attributes to a csv file</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">subprocess</span>
-<span class="kn">import</span> <span class="nn">traceback</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">'../'</span><span class="p">)</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="k">try</span><span class="p">:</span>
- <span class="n">ec_api</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="kn">import</span> <span class="nn">ecmwfapi</span>
-<span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
- <span class="n">ec_api</span> <span class="o">=</span> <span class="kc">False</span>
-
-<span class="k">try</span><span class="p">:</span>
- <span class="n">cds_api</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="kn">import</span> <span class="nn">cdsapi</span>
-<span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
- <span class="n">cds_api</span> <span class="o">=</span> <span class="kc">False</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="MarsRetrieval"><a class="viewcode-back" href="../api.html#MarsRetrieval.MarsRetrieval">[docs]</a><span class="k">class</span> <span class="nc">MarsRetrieval</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''Specific syntax and content for submission of MARS retrievals.</span>
-
-<span class="sd"> A MARS revtrieval has a specific syntax with a selection of keywords and</span>
-<span class="sd"> their corresponding values. This class provides the necessary functions</span>
-<span class="sd"> by displaying the selected parameters and their values and the actual</span>
-<span class="sd"> retrievement of the data through a mars request or a Python web api</span>
-<span class="sd"> interface. The initialization already expects all the keyword values.</span>
-
-<span class="sd"> A description of MARS keywords/arguments and examples of their</span>
-<span class="sd"> values can be found here:</span>
-<span class="sd"> https://software.ecmwf.int/wiki/display/UDOC/\</span>
-<span class="sd"> Identification+keywords#Identificationkeywords-class</span>
-
-<span class="sd"> Attributes</span>
-<span class="sd"> ----------</span>
-<span class="sd"> server : ECMWFService or ECMWFDataServer</span>
-<span class="sd"> This is the connection to the ECMWF data servers.</span>
-
-<span class="sd"> public : int</span>
-<span class="sd"> Decides which Web API Server version is used.</span>
-
-<span class="sd"> marsclass : str, optional</span>
-<span class="sd"> Characterisation of dataset.</span>
-
-<span class="sd"> dataset : str, optional</span>
-<span class="sd"> For public datasets there is the specific naming and parameter</span>
-<span class="sd"> dataset which has to be used to characterize the type of</span>
-<span class="sd"> data.</span>
-
-<span class="sd"> type : str, optional</span>
-<span class="sd"> Determines the type of fields to be retrieved.</span>
-
-<span class="sd"> levtype : str, optional</span>
-<span class="sd"> Denotes type of level.</span>
-
-<span class="sd"> levelist : str, optional</span>
-<span class="sd"> Specifies the required levels.</span>
-
-<span class="sd"> repres : str, optional</span>
-<span class="sd"> Selects the representation of the archived data.</span>
-
-<span class="sd"> date : str, optional</span>
-<span class="sd"> Specifies the Analysis date, the Forecast base date or</span>
-<span class="sd"> Observations date.</span>
-
-<span class="sd"> resol : str, optional</span>
-<span class="sd"> Specifies the desired triangular truncation of retrieved data,</span>
-<span class="sd"> before carrying out any other selected post-processing.</span>
-
-<span class="sd"> stream : str, optional</span>
-<span class="sd"> Identifies the forecasting system used to generate the data.</span>
-
-<span class="sd"> area : str, optional</span>
-<span class="sd"> Specifies the desired sub-area of data to be extracted.</span>
-
-<span class="sd"> time : str, optional</span>
-<span class="sd"> Specifies the time of the data in hours and minutes.</span>
-
-<span class="sd"> step : str, optional</span>
-<span class="sd"> Specifies the forecast time step from forecast base time.</span>
-
-<span class="sd"> expver : str, optional</span>
-<span class="sd"> The version of the dataset.</span>
-
-<span class="sd"> number : str, optional</span>
-<span class="sd"> Selects the member in ensemble forecast run.</span>
-
-<span class="sd"> accuracy : str, optional</span>
-<span class="sd"> Specifies the number of bits per value to be used in the</span>
-<span class="sd"> generated GRIB coded fields.</span>
-
-<span class="sd"> grid : str, optional</span>
-<span class="sd"> Specifies the output grid which can be either a Gaussian grid</span>
-<span class="sd"> or a Latitude/Longitude grid.</span>
-
-<span class="sd"> gaussian : str, optional</span>
-<span class="sd"> This parameter is deprecated and should no longer be used.</span>
-<span class="sd"> Specifies the desired type of Gaussian grid for the output.</span>
-
-<span class="sd"> target : str, optional</span>
-<span class="sd"> Specifies a file into which data is to be written after</span>
-<span class="sd"> retrieval or manipulation.</span>
-
-<span class="sd"> param : str, optional</span>
-<span class="sd"> Specifies the meteorological parameter.</span>
-<span class="sd"> '''</span>
-
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">server</span><span class="p">,</span> <span class="n">public</span><span class="p">,</span> <span class="n">marsclass</span><span class="o">=</span><span class="s2">"EA"</span><span class="p">,</span> <span class="n">dataset</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="nb">type</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span>
- <span class="n">levtype</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">levelist</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">repres</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">date</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">resol</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span>
- <span class="n">stream</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">area</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">time</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">step</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">expver</span><span class="o">=</span><span class="s2">"1"</span><span class="p">,</span>
- <span class="n">number</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">accuracy</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">grid</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">gaussian</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span> <span class="n">target</span><span class="o">=</span><span class="s2">""</span><span class="p">,</span>
- <span class="n">param</span><span class="o">=</span><span class="s2">""</span><span class="p">):</span>
- <span class="sd">'''Initialises the instance of the MarsRetrieval class and</span>
-<span class="sd"> defines and assigns a set of the necessary retrieval parameters</span>
-<span class="sd"> for the FLEXPART input data.</span>
-<span class="sd"> A description of MARS keywords/arguments, their dependencies</span>
-<span class="sd"> on each other and examples of their values can be found here:</span>
-
-<span class="sd"> https://software.ecmwf.int/wiki/display/UDOC/MARS+keywords</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> server : ECMWFService or ECMWFDataServer</span>
-<span class="sd"> This is the connection to the ECMWF data servers.</span>
-<span class="sd"> It is needed for the pythonic access of ECMWF data.</span>
-
-<span class="sd"> public : int</span>
-<span class="sd"> Decides which Web API version is used:</span>
-<span class="sd"> 0: member-state users and full archive access</span>
-<span class="sd"> 1: public access and limited access to the public server and</span>
-<span class="sd"> datasets. Needs the parameter dataset.</span>
-<span class="sd"> Default is "0" and for member-state users.</span>
-
-<span class="sd"> marsclass : str, optional</span>
-<span class="sd"> Characterisation of dataset. E.g. EI (ERA-Interim),</span>
-<span class="sd"> E4 (ERA40), OD (Operational archive), EA (ERA5).</span>
-<span class="sd"> Default is the ERA5 dataset "EA".</span>
-
-<span class="sd"> dataset : str, optional</span>
-<span class="sd"> For public datasets there is the specific naming and parameter</span>
-<span class="sd"> dataset which has to be used to characterize the type of</span>
-<span class="sd"> data. Usually there is less data available, either in times,</span>
-<span class="sd"> domain or parameter.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> type : str, optional</span>
-<span class="sd"> Determines the type of fields to be retrieved.</span>
-<span class="sd"> Selects between observations, images or fields.</span>
-<span class="sd"> Examples for fields: Analysis (an), Forecast (fc),</span>
-<span class="sd"> Perturbed Forecast (pf), Control Forecast (cf) and so on.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> levtype : str, optional</span>
-<span class="sd"> Denotes type of level. Has a direct implication on valid</span>
-<span class="sd"> levelist values!</span>
-<span class="sd"> E.g. model level (ml), pressure level (pl), surface (sfc),</span>
-<span class="sd"> potential vorticity (pv), potential temperature (pt)</span>
-<span class="sd"> and depth (dp).</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> levelist : str, optional</span>
-<span class="sd"> Specifies the required levels. It has to have a valid</span>
-<span class="sd"> correspondence to the selected levtype.</span>
-<span class="sd"> Examples: model level: 1/to/137, pressure levels: 500/to/1000</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> repres : str, optional</span>
-<span class="sd"> Selects the representation of the archived data.</span>
-<span class="sd"> E.g. sh - spherical harmonics, gg - Gaussian grid,</span>
-<span class="sd"> ll - latitude/longitude, ...</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> date : str, optional</span>
-<span class="sd"> Specifies the Analysis date, the Forecast base date or</span>
-<span class="sd"> Observations date. Valid formats are:</span>
-<span class="sd"> Absolute as YYYY-MM-DD or YYYYMMDD.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> resol : str, optional</span>
-<span class="sd"> Specifies the desired triangular truncation of retrieved data,</span>
-<span class="sd"> before carrying out any other selected post-processing.</span>
-<span class="sd"> The default is automatic truncation (auto), by which the lowest</span>
-<span class="sd"> resolution compatible with the value specified in grid is</span>
-<span class="sd"> automatically selected for the retrieval.</span>
-<span class="sd"> Users wanting to perform post-processing from full spectral</span>
-<span class="sd"> resolution should specify Archived Value (av).</span>
-<span class="sd"> The following are examples of existing resolutions found in</span>
-<span class="sd"> the archive: 63, 106, 159, 213, 255, 319, 399, 511, 799 or 1279.</span>
-<span class="sd"> This keyword has no meaning/effect if the archived data is</span>
-<span class="sd"> not in spherical harmonics representation.</span>
-<span class="sd"> The best selection can be found here:</span>
-<span class="sd"> https://software.ecmwf.int/wiki/display/UDOC/\</span>
-<span class="sd"> Retrieve#Retrieve-Truncationbeforeinterpolation</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> stream : str, optional</span>
-<span class="sd"> Identifies the forecasting system used to generate the data.</span>
-<span class="sd"> E.g. oper (Atmospheric model), enfo (Ensemble forecats), ...</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> area : str, optional</span>
-<span class="sd"> Specifies the desired sub-area of data to be extracted.</span>
-<span class="sd"> Areas can be defined to wrap around the globe.</span>
-
-<span class="sd"> Latitude values must be given as signed numbers, with:</span>
-<span class="sd"> north latitudes (i.e. north of the equator)</span>
-<span class="sd"> being positive (e.g: 40.5)</span>
-<span class="sd"> south latitutes (i.e. south of the equator)</span>
-<span class="sd"> being negative (e.g: -50.5)</span>
-<span class="sd"> Longtitude values must be given as signed numbers, with:</span>
-<span class="sd"> east longitudes (i.e. east of the 0 degree meridian)</span>
-<span class="sd"> being positive (e.g: 35.0)</span>
-<span class="sd"> west longitudes (i.e. west of the 0 degree meridian)</span>
-<span class="sd"> being negative (e.g: -20.5)</span>
-
-<span class="sd"> E.g.: North/West/South/East</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> time : str, optional</span>
-<span class="sd"> Specifies the time of the data in hours and minutes.</span>
-<span class="sd"> Valid values depend on the type of data: Analysis time,</span>
-<span class="sd"> Forecast base time or First guess verification time</span>
-<span class="sd"> (all usually at synoptic hours: 00, 06, 12 and 18 ).</span>
-<span class="sd"> Observation time (any combination in hours and minutes is valid,</span>
-<span class="sd"> subject to data availability in the archive).</span>
-<span class="sd"> The syntax is HHMM or HH:MM. If MM is omitted it defaults to 00.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> step : str, optional</span>
-<span class="sd"> Specifies the forecast time step from forecast base time.</span>
-<span class="sd"> Valid values are hours (HH) from forecast base time. It also</span>
-<span class="sd"> specifies the length of the forecast which verifies at</span>
-<span class="sd"> First Guess time.</span>
-<span class="sd"> E.g. 1/3/6-hourly</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> expver : str, optional</span>
-<span class="sd"> The version of the dataset. Each experiment is assigned a</span>
-<span class="sd"> unique code (version). Production data is assigned 1 or 2,</span>
-<span class="sd"> and experimental data in Operations 11, 12 ,...</span>
-<span class="sd"> Research or Member State's experiments have a four letter</span>
-<span class="sd"> experiment identifier.</span>
-<span class="sd"> Default is "1".</span>
-
-<span class="sd"> number : str, optional</span>
-<span class="sd"> Selects the member in ensemble forecast run. (Only then it</span>
-<span class="sd"> is necessary.) It has a different meaning depending on</span>
-<span class="sd"> the type of data.</span>
-<span class="sd"> E.g. Perturbed Forecasts: specifies the Ensemble forecast member</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> accuracy : str, optional</span>
-<span class="sd"> Specifies the number of bits per value to be used in the</span>
-<span class="sd"> generated GRIB coded fields.</span>
-<span class="sd"> A positive integer may be given to specify the preferred number</span>
-<span class="sd"> of bits per packed value. This must not be greater than the</span>
-<span class="sd"> number of bits normally used for a Fortran integer on the</span>
-<span class="sd"> processor handling the request (typically 32 or 64 bit).</span>
-<span class="sd"> Within a compute request the accuracy of the original fields</span>
-<span class="sd"> can be passed to the result field by specifying accuracy=av.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> grid : str, optional</span>
-<span class="sd"> Specifies the output grid which can be either a Gaussian grid</span>
-<span class="sd"> or a Latitude/Longitude grid. MARS requests specifying</span>
-<span class="sd"> grid=av will return the archived model grid.</span>
-
-<span class="sd"> Lat/Lon grid: The grid spacing needs to be an integer</span>
-<span class="sd"> fraction of 90 degrees e.g. grid = 0.5/0.5</span>
-
-<span class="sd"> Gaussian grid: specified by a letter denoting the type of</span>
-<span class="sd"> Gaussian grid followed by an integer (the grid number)</span>
-<span class="sd"> representing the number of lines between the Pole and Equator,</span>
-<span class="sd"> e.g.</span>
-<span class="sd"> grid = F160 - full (or regular) Gaussian grid with</span>
-<span class="sd"> 160 latitude lines between the pole and equator</span>
-<span class="sd"> grid = N320 - ECMWF original reduced Gaussian grid with</span>
-<span class="sd"> 320 latitude lines between the pole and equator,</span>
-<span class="sd"> see Reduced Gaussian Grids for grid numbers used at ECMWF</span>
-<span class="sd"> grid = O640 - ECMWF octahedral (reduced) Gaussian grid with</span>
-<span class="sd"> 640 latitude lines between the pole and equator</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> gaussian : str, optional</span>
-<span class="sd"> This parameter is deprecated and should no longer be used.</span>
-<span class="sd"> Specifies the desired type of Gaussian grid for the output.</span>
-<span class="sd"> Valid Gaussian grids are quasi-regular (reduced) or regular.</span>
-<span class="sd"> Keyword gaussian can only be specified together with</span>
-<span class="sd"> keyword grid. Gaussian without grid has no effect.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> target : str, optional</span>
-<span class="sd"> Specifies a file into which data is to be written after</span>
-<span class="sd"> retrieval or manipulation. Path names should always be</span>
-<span class="sd"> enclosed in double quotes. The MARS client supports automatic</span>
-<span class="sd"> generation of multiple target files using MARS keywords</span>
-<span class="sd"> enclosed in square brackets [ ]. If the environment variable</span>
-<span class="sd"> MARS_MULTITARGET_STRICT_FORMAT is set to 1 before calling mars,</span>
-<span class="sd"> the keyword values will be used in the filename as shown by</span>
-<span class="sd"> the ecCodes GRIB tool grib_ls -m, e.g. with</span>
-<span class="sd"> MARS_MULTITARGET_STRICT_FORMAT set to 1 the keywords time,</span>
-<span class="sd"> expver and param will be formatted as 0600, 0001 and 129.128</span>
-<span class="sd"> rather than 600, 1 and 129.</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> param : str, optional</span>
-<span class="sd"> Specifies the meteorological parameter.</span>
-<span class="sd"> The list of meteorological parameters in MARS is extensive.</span>
-<span class="sd"> Their availability is directly related to their meteorological</span>
-<span class="sd"> meaning and, therefore, the rest of directives specified</span>
-<span class="sd"> in the MARS request.</span>
-<span class="sd"> Meteorological parameters can be specified by their</span>
-<span class="sd"> GRIB code (param=130), their mnemonic (param=t) or</span>
-<span class="sd"> full name (param=temperature).</span>
-<span class="sd"> The list of parameter should be seperated by a "/"-sign.</span>
-<span class="sd"> E.g. 130/131/133</span>
-<span class="sd"> Default is an empty string.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">server</span> <span class="o">=</span> <span class="n">server</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">public</span> <span class="o">=</span> <span class="n">public</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">marsclass</span> <span class="o">=</span> <span class="n">marsclass</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">dataset</span> <span class="o">=</span> <span class="n">dataset</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">type</span> <span class="o">=</span> <span class="nb">type</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">levtype</span> <span class="o">=</span> <span class="n">levtype</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">levelist</span> <span class="o">=</span> <span class="n">levelist</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">repres</span> <span class="o">=</span> <span class="n">repres</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">date</span> <span class="o">=</span> <span class="n">date</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">resol</span> <span class="o">=</span> <span class="n">resol</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">stream</span> <span class="o">=</span> <span class="n">stream</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">area</span> <span class="o">=</span> <span class="n">area</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">time</span> <span class="o">=</span> <span class="n">time</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">step</span> <span class="o">=</span> <span class="n">step</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">expver</span> <span class="o">=</span> <span class="n">expver</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">number</span> <span class="o">=</span> <span class="n">number</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">accuracy</span> <span class="o">=</span> <span class="n">accuracy</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">grid</span> <span class="o">=</span> <span class="n">grid</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">gaussian</span> <span class="o">=</span> <span class="n">gaussian</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">target</span> <span class="o">=</span> <span class="n">target</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">param</span> <span class="o">=</span> <span class="n">param</span>
-
- <span class="k">return</span>
-
-
-<div class="viewcode-block" id="MarsRetrieval.display_info"><a class="viewcode-back" href="../api.html#MarsRetrieval.MarsRetrieval.display_info">[docs]</a> <span class="k">def</span> <span class="nf">display_info</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Prints all class attributes and their values to the</span>
-<span class="sd"> standard output.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># Get all class attributes and their values as a dictionary</span>
- <span class="n">attrs</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
-
- <span class="c1"># iterate through all attributes and print them</span>
- <span class="c1"># with their corresponding values</span>
- <span class="k">for</span> <span class="n">item</span> <span class="ow">in</span> <span class="n">attrs</span><span class="o">.</span><span class="n">items</span><span class="p">():</span>
- <span class="k">if</span> <span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="ow">in</span> <span class="p">[</span><span class="s1">'server'</span><span class="p">,</span> <span class="s1">'public'</span><span class="p">]:</span>
- <span class="k">pass</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">item</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">+</span> <span class="s1">': '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">item</span><span class="p">[</span><span class="mi">1</span><span class="p">]))</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="MarsRetrieval.print_infodata_csv"><a class="viewcode-back" href="../api.html#MarsRetrieval.MarsRetrieval.print_infodata_csv">[docs]</a> <span class="k">def</span> <span class="nf">print_infodata_csv</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">inputdir</span><span class="p">,</span> <span class="n">request_number</span><span class="p">):</span>
- <span class="sd">'''Write all request parameter in alpabetical order into a "csv" file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> inputdir : str</span>
-<span class="sd"> The path where all data from the retrievals are stored.</span>
-
-<span class="sd"> request_number : int</span>
-<span class="sd"> Number of mars requests for flux and non-flux data.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="c1"># Get all class attributes and their values as a dictionary</span>
- <span class="n">attrs</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'server'</span><span class="p">]</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'public'</span><span class="p">]</span>
-
- <span class="c1"># open a file to store all requests to</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">inputdir</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FILE_MARS_REQUESTS</span><span class="p">),</span> <span class="s1">'a'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">request_number</span><span class="p">)</span> <span class="o">+</span> <span class="s1">', '</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">', '</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">attrs</span><span class="p">[</span><span class="n">key</span><span class="p">])</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">attrs</span><span class="o">.</span><span class="n">iterkeys</span><span class="p">())))</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="MarsRetrieval.data_retrieve"><a class="viewcode-back" href="../api.html#MarsRetrieval.MarsRetrieval.data_retrieve">[docs]</a> <span class="k">def</span> <span class="nf">data_retrieve</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Submits a MARS retrieval. Depending on the existence of</span>
-<span class="sd"> ECMWF Web-API or CDS API it is submitted via Python or a</span>
-<span class="sd"> subprocess in the Shell. The parameter for the mars retrieval</span>
-<span class="sd"> are taken from the defined class attributes.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># Get all class attributes and their values as a dictionary</span>
- <span class="n">attrs</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="bp">self</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
-
- <span class="c1"># eliminate unnecessary attributes from the dictionary attrs</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'server'</span><span class="p">]</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'public'</span><span class="p">]</span>
-
- <span class="c1"># exchange parameter name for marsclass</span>
- <span class="n">mclass</span> <span class="o">=</span> <span class="n">attrs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'marsclass'</span><span class="p">)</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'marsclass'</span><span class="p">]</span>
- <span class="n">attrs</span><span class="p">[</span><span class="s1">'class'</span><span class="p">]</span> <span class="o">=</span> <span class="n">mclass</span>
-
- <span class="c1"># prepare target variable as needed for the Web API or CDS API mode</span>
- <span class="c1"># within the dictionary for full access</span>
- <span class="c1"># as a single variable for public access</span>
- <span class="n">target</span> <span class="o">=</span> <span class="n">attrs</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'target'</span><span class="p">)</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="nb">int</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">public</span><span class="p">):</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'target'</span><span class="p">]</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'target: '</span> <span class="o">+</span> <span class="n">target</span><span class="p">)</span>
-
- <span class="c1"># find all keys without a value and convert all other values to strings</span>
- <span class="n">empty_keys</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">key</span><span class="p">,</span> <span class="n">value</span> <span class="ow">in</span> <span class="n">attrs</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="k">if</span> <span class="n">value</span> <span class="o">==</span> <span class="s1">''</span><span class="p">:</span>
- <span class="n">empty_keys</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">key</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">attrs</span><span class="p">[</span><span class="n">key</span><span class="p">]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">value</span><span class="p">)</span>
-
- <span class="c1"># delete all empty parameter from the dictionary</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">empty_keys</span><span class="p">:</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="n">key</span><span class="p">]</span>
-
- <span class="c1"># MARS request via Python script</span>
- <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="p">:</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">cds_api</span> <span class="ow">and</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="p">,</span> <span class="n">cdsapi</span><span class="o">.</span><span class="n">Client</span><span class="p">):</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'RETRIEVE ERA5 WITH CDS API!'</span><span class="p">)</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="o">.</span><span class="n">retrieve</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">CDS_DATASET</span><span class="p">,</span>
- <span class="n">attrs</span><span class="p">,</span> <span class="n">target</span><span class="p">)</span>
- <span class="k">elif</span> <span class="n">ec_api</span> <span class="ow">and</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="p">,</span> <span class="n">ecmwfapi</span><span class="o">.</span><span class="n">ECMWFDataServer</span><span class="p">):</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'RETRIEVE PUBLIC DATA (NOT ERA5)!'</span><span class="p">)</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="o">.</span><span class="n">retrieve</span><span class="p">(</span><span class="n">attrs</span><span class="p">)</span>
- <span class="k">elif</span> <span class="n">ec_api</span> <span class="ow">and</span> <span class="nb">isinstance</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="p">,</span> <span class="n">ecmwfapi</span><span class="o">.</span><span class="n">ECMWFService</span><span class="p">):</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'EXECUTE NON-PUBLIC RETRIEVAL (NOT ERA5)!'</span><span class="p">)</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">server</span><span class="o">.</span><span class="n">execute</span><span class="p">(</span><span class="n">attrs</span><span class="p">,</span> <span class="n">target</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'ERROR:'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'No match for Web API instance!'</span><span class="p">)</span>
- <span class="k">raise</span> <span class="ne">IOError</span>
- <span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n\n</span><span class="s1">MARS Request failed!'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
- <span class="n">tb</span> <span class="o">=</span> <span class="n">sys</span><span class="o">.</span><span class="n">exc_info</span><span class="p">()[</span><span class="mi">2</span><span class="p">]</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">traceback</span><span class="o">.</span><span class="n">format_exc</span><span class="p">())</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">()</span>
-
- <span class="c1"># MARS request via call in shell</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">request_str</span> <span class="o">=</span> <span class="s1">'ret'</span>
- <span class="k">for</span> <span class="n">key</span><span class="p">,</span> <span class="n">value</span> <span class="ow">in</span> <span class="n">attrs</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="n">request_str</span> <span class="o">=</span> <span class="n">request_str</span> <span class="o">+</span> <span class="s1">','</span> <span class="o">+</span> <span class="n">key</span> <span class="o">+</span> <span class="s1">'='</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">value</span><span class="p">)</span>
- <span class="n">request_str</span> <span class="o">+=</span> <span class="s1">',target="'</span> <span class="o">+</span> <span class="n">target</span> <span class="o">+</span> <span class="s1">'"'</span>
- <span class="n">p</span> <span class="o">=</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">Popen</span><span class="p">([</span><span class="s1">'mars'</span><span class="p">,</span> <span class="s1">'-p'</span><span class="p">],</span>
- <span class="n">stdin</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stdout</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stderr</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">bufsize</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
- <span class="n">pout</span> <span class="o">=</span> <span class="n">p</span><span class="o">.</span><span class="n">communicate</span><span class="p">(</span><span class="nb">input</span><span class="o">=</span><span class="n">request_str</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">pout</span><span class="o">.</span><span class="n">decode</span><span class="p">())</span>
-
- <span class="k">if</span> <span class="s1">'Some errors reported'</span> <span class="ow">in</span> <span class="n">pout</span><span class="o">.</span><span class="n">decode</span><span class="p">():</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'MARS Request failed - please check request'</span><span class="p">)</span>
- <span class="k">raise</span> <span class="ne">IOError</span>
- <span class="k">elif</span> <span class="n">os</span><span class="o">.</span><span class="n">stat</span><span class="p">(</span><span class="n">target</span><span class="p">)</span><span class="o">.</span><span class="n">st_size</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'MARS Request returned no data - please check request'</span><span class="p">)</span>
- <span class="k">raise</span> <span class="ne">IOError</span>
-
- <span class="k">return</span></div></div>
-</pre></div>
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-
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- <li class="wy-breadcrumbs-aside">
-
- </li>
-
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- <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
- <div itemprop="articleBody">
-
- <h1>Source code for UioFiles</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - modified method list_files to work with glob instead of listdir</span>
-<span class="c1"># - added pattern search in method list_files</span>
-<span class="c1">#</span>
-<span class="c1"># February - December 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - optimisation of method list_files since it didn't work correctly</span>
-<span class="c1"># for sub directories</span>
-<span class="c1"># - additional speed up of method list_files</span>
-<span class="c1"># - modified the class so that it is initiated with a pattern instead</span>
-<span class="c1"># of suffixes. Gives more precision in selection of files.</span>
-<span class="c1"># - added delete method</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">fnmatch</span>
-
-<span class="c1"># software specific modules from flex_extract</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="s1">'../'</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">mods.tools</span> <span class="k">import</span> <span class="n">silent_remove</span><span class="p">,</span> <span class="n">get_list_as_string</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># CLASS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-
-<div class="viewcode-block" id="UioFiles"><a class="viewcode-back" href="../api.html#UioFiles.UioFiles">[docs]</a><span class="k">class</span> <span class="nc">UioFiles</span><span class="p">(</span><span class="nb">object</span><span class="p">):</span>
- <span class="sd">'''Collection of files matching a specific pattern.</span>
-
-<span class="sd"> The pattern can contain regular expressions for the files.</span>
-<span class="sd"> The files are listed and can be transformed to a single string or</span>
-<span class="sd"> they can be deleted.</span>
-
-<span class="sd"> Attributes</span>
-<span class="sd"> ----------</span>
-<span class="sd"> path : str</span>
-<span class="sd"> Directory where to list the files.</span>
-
-<span class="sd"> pattern : str</span>
-<span class="sd"> Regular expression pattern. For example: '\*.grb'</span>
-
-<span class="sd"> files : list of str</span>
-<span class="sd"> List of files matching the pattern in the path.</span>
-<span class="sd"> '''</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="c1"># CLASS METHODS</span>
- <span class="c1"># --------------------------------------------------------------------------</span>
- <span class="k">def</span> <span class="nf">__init__</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">path</span><span class="p">,</span> <span class="n">pattern</span><span class="p">):</span>
- <span class="sd">'''Assignes a specific pattern for these files.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> path : str</span>
-<span class="sd"> Directory where to list the files.</span>
-
-<span class="sd"> pattern : str</span>
-<span class="sd"> Regular expression pattern. For example: '\*.grb'</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">path</span> <span class="o">=</span> <span class="n">path</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">pattern</span> <span class="o">=</span> <span class="n">pattern</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">files</span> <span class="o">=</span> <span class="p">[]</span>
-
- <span class="bp">self</span><span class="o">.</span><span class="n">_list_files</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">path</span><span class="p">)</span>
-
- <span class="k">return</span>
-
-
- <span class="k">def</span> <span class="nf">_list_files</span><span class="p">(</span><span class="bp">self</span><span class="p">,</span> <span class="n">path</span><span class="p">):</span>
- <span class="sd">'''Lists all files in the directory with the matching</span>
-<span class="sd"> regular expression pattern.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> path : str</span>
-<span class="sd"> Path to the files.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="c1"># Get the absolute path</span>
- <span class="n">path</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">path</span><span class="p">)</span>
-
- <span class="c1"># get all files in the dir and subdir as absolut path</span>
- <span class="k">for</span> <span class="n">root</span><span class="p">,</span> <span class="n">dirnames</span><span class="p">,</span> <span class="n">filenames</span> <span class="ow">in</span> <span class="n">os</span><span class="o">.</span><span class="n">walk</span><span class="p">(</span><span class="n">path</span><span class="p">):</span>
- <span class="k">for</span> <span class="n">filename</span> <span class="ow">in</span> <span class="n">fnmatch</span><span class="o">.</span><span class="n">filter</span><span class="p">(</span><span class="n">filenames</span><span class="p">,</span> <span class="bp">self</span><span class="o">.</span><span class="n">pattern</span><span class="p">):</span>
- <span class="bp">self</span><span class="o">.</span><span class="n">files</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">root</span><span class="p">,</span> <span class="n">filename</span><span class="p">))</span>
-
- <span class="k">return</span>
-
-
- <span class="k">def</span> <span class="nf">__str__</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Converts the list of files into a single string.</span>
-<span class="sd"> The entries are sepereated by "," sign.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> files_string : str</span>
-<span class="sd"> The content of the list as a single string.</span>
-<span class="sd"> '''</span>
-
- <span class="n">filenames</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">f</span><span class="p">)</span> <span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">files_string</span> <span class="o">=</span> <span class="n">get_list_as_string</span><span class="p">(</span><span class="n">filenames</span><span class="p">,</span> <span class="n">concatenate_sign</span><span class="o">=</span><span class="s1">', '</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">files_string</span>
-
-
-<div class="viewcode-block" id="UioFiles.delete_files"><a class="viewcode-back" href="../api.html#UioFiles.UioFiles.delete_files">[docs]</a> <span class="k">def</span> <span class="nf">delete_files</span><span class="p">(</span><span class="bp">self</span><span class="p">):</span>
- <span class="sd">'''Deletes the files.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">for</span> <span class="n">old_file</span> <span class="ow">in</span> <span class="bp">self</span><span class="o">.</span><span class="n">files</span><span class="p">:</span>
- <span class="n">silent_remove</span><span class="p">(</span><span class="n">old_file</span><span class="p">)</span>
-
- <span class="k">return</span></div></div>
-</pre></div>
-
- </div>
-
- </div>
- <footer>
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-
- <h1>Source code for disaggregation</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Philipp (University of Vienna)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: March 2018</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - migration of the methods dapoly and darain from Fortran</span>
-<span class="c1"># (flex_extract_v6 and earlier) to Python</span>
-<span class="c1">#</span>
-<span class="c1"># April 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added structured documentation</span>
-<span class="c1"># - outsourced the disaggregation functions dapoly and darain</span>
-<span class="c1"># to a new module named disaggregation</span>
-<span class="c1"># - added the new disaggregation method for precipitation</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#</span>
-<span class="c1"># @Methods:</span>
-<span class="c1"># - dapoly</span>
-<span class="c1"># - darain</span>
-<span class="c1"># - IA3</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''Disaggregation of deaccumulated flux data from an ECMWF model FG field.</span>
-
-<span class="sd">Initially the flux data to be concerned are:</span>
-<span class="sd"> - large-scale precipitation</span>
-<span class="sd"> - convective precipitation</span>
-<span class="sd"> - surface sensible heat flux</span>
-<span class="sd"> - surface solar radiation</span>
-<span class="sd"> - u stress</span>
-<span class="sd"> - v stress</span>
-
-<span class="sd">Different versions of disaggregation is provided for rainfall</span>
-<span class="sd">data (darain, modified linear) and the surface fluxes and</span>
-<span class="sd">stress data (dapoly, cubic polynomial).</span>
-<span class="sd">'''</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># FUNCTIONS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="dapoly"><a class="viewcode-back" href="../api.html#disaggregation.dapoly">[docs]</a><span class="k">def</span> <span class="nf">dapoly</span><span class="p">(</span><span class="n">alist</span><span class="p">):</span>
- <span class="sd">"""Cubic polynomial interpolation of deaccumulated fluxes.</span>
-
-<span class="sd"> Interpolation of deaccumulated fluxes of an ECMWF model FG field</span>
-<span class="sd"> using a cubic polynomial solution which conserves the integrals</span>
-<span class="sd"> of the fluxes within each timespan.</span>
-<span class="sd"> Disaggregation is done for 4 accumluated timespans which</span>
-<span class="sd"> generates a new, disaggregated value which is output at the</span>
-<span class="sd"> central point of the 4 accumulation timespans.</span>
-<span class="sd"> This new point is used for linear interpolation of the complete</span>
-<span class="sd"> timeseries afterwards.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> alist : list of array of float</span>
-<span class="sd"> List of 4 timespans as 2-dimensional, horizontal fields.</span>
-<span class="sd"> E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> nfield : array of float</span>
-<span class="sd"> Interpolated flux at central point of accumulation timespan.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> March 2000 : P. JAMES</span>
-<span class="sd"> Original author</span>
-
-<span class="sd"> June 2003 : A. BECK</span>
-<span class="sd"> Adaptations</span>
-
-<span class="sd"> November 2015 : Leopold Haimberger (University of Vienna)</span>
-<span class="sd"> Migration from Fortran to Python</span>
-
-<span class="sd"> """</span>
-
- <span class="n">pya</span> <span class="o">=</span> <span class="p">(</span><span class="n">alist</span><span class="p">[</span><span class="mi">3</span><span class="p">]</span> <span class="o">-</span> <span class="n">alist</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">+</span> <span class="mf">3.</span> <span class="o">*</span> <span class="p">(</span><span class="n">alist</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="n">alist</span><span class="p">[</span><span class="mi">2</span><span class="p">]))</span> <span class="o">/</span> <span class="mf">6.</span>
- <span class="n">pyb</span> <span class="o">=</span> <span class="p">(</span><span class="n">alist</span><span class="p">[</span><span class="mi">2</span><span class="p">]</span> <span class="o">+</span> <span class="n">alist</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span> <span class="o">/</span> <span class="mf">2.</span> <span class="o">-</span> <span class="n">alist</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="mf">9.</span> <span class="o">*</span> <span class="n">pya</span> <span class="o">/</span> <span class="mf">2.</span>
- <span class="n">pyc</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="n">alist</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">-</span> <span class="mf">7.</span> <span class="o">*</span> <span class="n">pya</span> <span class="o">/</span> <span class="mf">2.</span> <span class="o">-</span> <span class="mf">2.</span> <span class="o">*</span> <span class="n">pyb</span>
- <span class="n">pyd</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">-</span> <span class="n">pya</span> <span class="o">/</span> <span class="mf">4.</span> <span class="o">-</span> <span class="n">pyb</span> <span class="o">/</span> <span class="mf">3.</span> <span class="o">-</span> <span class="n">pyc</span> <span class="o">/</span> <span class="mf">2.</span>
- <span class="n">nfield</span> <span class="o">=</span> <span class="mf">8.</span> <span class="o">*</span> <span class="n">pya</span> <span class="o">+</span> <span class="mf">4.</span> <span class="o">*</span> <span class="n">pyb</span> <span class="o">+</span> <span class="mf">2.</span> <span class="o">*</span> <span class="n">pyc</span> <span class="o">+</span> <span class="n">pyd</span>
-
- <span class="k">return</span> <span class="n">nfield</span></div>
-
-
-<div class="viewcode-block" id="darain"><a class="viewcode-back" href="../api.html#disaggregation.darain">[docs]</a><span class="k">def</span> <span class="nf">darain</span><span class="p">(</span><span class="n">alist</span><span class="p">):</span>
- <span class="sd">"""Linear interpolation of deaccumulated fluxes.</span>
-
-<span class="sd"> Interpolation of deaccumulated fluxes of an ECMWF model FG rainfall</span>
-<span class="sd"> field using a modified linear solution which conserves the integrals</span>
-<span class="sd"> of the fluxes within each timespan.</span>
-<span class="sd"> Disaggregation is done for 4 accumluated timespans which generates</span>
-<span class="sd"> a new, disaggregated value which is output at the central point</span>
-<span class="sd"> of the 4 accumulation timespans. This new point is used for linear</span>
-<span class="sd"> interpolation of the complete timeseries afterwards.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> alist : list of array of float</span>
-<span class="sd"> List of 4 timespans as 2-dimensional, horizontal fields.</span>
-<span class="sd"> E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> nfield : array of float</span>
-<span class="sd"> Interpolated flux at central point of accumulation timespan.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> March 2000 : P. JAMES</span>
-<span class="sd"> Original author</span>
-
-<span class="sd"> June 2003 : A. BECK</span>
-<span class="sd"> Adaptations</span>
-
-<span class="sd"> November 2015 : Leopold Haimberger (University of Vienna)</span>
-<span class="sd"> Migration from Fortran to Python</span>
-<span class="sd"> """</span>
-
- <span class="n">xa</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span>
- <span class="n">xb</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">1</span><span class="p">]</span>
- <span class="n">xc</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">2</span><span class="p">]</span>
- <span class="n">xd</span> <span class="o">=</span> <span class="n">alist</span><span class="p">[</span><span class="mi">3</span><span class="p">]</span>
- <span class="n">xa</span><span class="p">[</span><span class="n">xa</span> <span class="o"><</span> <span class="mf">0.</span><span class="p">]</span> <span class="o">=</span> <span class="mf">0.</span>
- <span class="n">xb</span><span class="p">[</span><span class="n">xb</span> <span class="o"><</span> <span class="mf">0.</span><span class="p">]</span> <span class="o">=</span> <span class="mf">0.</span>
- <span class="n">xc</span><span class="p">[</span><span class="n">xc</span> <span class="o"><</span> <span class="mf">0.</span><span class="p">]</span> <span class="o">=</span> <span class="mf">0.</span>
- <span class="n">xd</span><span class="p">[</span><span class="n">xd</span> <span class="o"><</span> <span class="mf">0.</span><span class="p">]</span> <span class="o">=</span> <span class="mf">0.</span>
-
- <span class="n">xac</span> <span class="o">=</span> <span class="mf">0.5</span> <span class="o">*</span> <span class="n">xb</span>
- <span class="n">mask</span> <span class="o">=</span> <span class="n">xa</span> <span class="o">+</span> <span class="n">xc</span> <span class="o">></span> <span class="mf">0.</span>
- <span class="n">xac</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">=</span> <span class="n">xb</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">*</span> <span class="n">xc</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">/</span> <span class="p">(</span><span class="n">xa</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">+</span> <span class="n">xc</span><span class="p">[</span><span class="n">mask</span><span class="p">])</span>
- <span class="n">xbd</span> <span class="o">=</span> <span class="mf">0.5</span> <span class="o">*</span> <span class="n">xc</span>
- <span class="n">mask</span> <span class="o">=</span> <span class="n">xb</span> <span class="o">+</span> <span class="n">xd</span> <span class="o">></span> <span class="mf">0.</span>
- <span class="n">xbd</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">=</span> <span class="n">xb</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">*</span> <span class="n">xc</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">/</span> <span class="p">(</span><span class="n">xb</span><span class="p">[</span><span class="n">mask</span><span class="p">]</span> <span class="o">+</span> <span class="n">xd</span><span class="p">[</span><span class="n">mask</span><span class="p">])</span>
- <span class="n">nfield</span> <span class="o">=</span> <span class="n">xac</span> <span class="o">+</span> <span class="n">xbd</span>
-
- <span class="k">return</span> <span class="n">nfield</span></div>
-
-<div class="viewcode-block" id="IA3"><a class="viewcode-back" href="../api.html#disaggregation.IA3">[docs]</a><span class="k">def</span> <span class="nf">IA3</span><span class="p">(</span><span class="n">g</span><span class="p">):</span>
- <span class="sd">""" Interpolation with a non-negative geometric mean based algorithm.</span>
-
-<span class="sd"> The original grid is reconstructed by adding two sampling points in each</span>
-<span class="sd"> data series interval. This subgrid is used to keep all information during</span>
-<span class="sd"> the interpolation within the associated interval. Additionally, an advanced</span>
-<span class="sd"> monotonicity filter is applied to improve the monotonicity properties of</span>
-<span class="sd"> the series.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> (C) Copyright 2017-2019</span>
-<span class="sd"> Sabine Hittmeir, Anne Philipp, Petra Seibert</span>
-
-<span class="sd"> This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="sd"> International License. To view a copy of this license, visit</span>
-<span class="sd"> http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="sd"> Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> g : list of float</span>
-<span class="sd"> Complete data series that will be interpolated having</span>
-<span class="sd"> the dimension of the original raw series.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> f : list of float</span>
-<span class="sd"> The interpolated data series with additional subgrid points.</span>
-<span class="sd"> Its dimension is equal to the length of the input data series</span>
-<span class="sd"> times three.</span>
-
-
-<span class="sd"> References</span>
-<span class="sd"> ----------</span>
-<span class="sd"> For more information see article:</span>
-<span class="sd"> Hittmeir, S.; Philipp, A.; Seibert, P. (2017): A conservative</span>
-<span class="sd"> interpolation scheme for extensive quantities with application to the</span>
-<span class="sd"> Lagrangian particle dispersion model FLEXPART.,</span>
-<span class="sd"> Geoscientific Model Development</span>
-<span class="sd"> """</span>
-
- <span class="c1">####################### variable description #############################</span>
- <span class="c1"># #</span>
- <span class="c1"># i - index variable for looping over the data series #</span>
- <span class="c1"># g - input data series #</span>
- <span class="c1"># f - interpolated and filtered data series with additional #</span>
- <span class="c1"># grid points #</span>
- <span class="c1"># fi - function value at position i, f_i #</span>
- <span class="c1"># fi1 - first sub-grid function value f_i^1 #</span>
- <span class="c1"># fi2 - second sub-grid function value f_i^2 #</span>
- <span class="c1"># fip1 - next function value at position i+1, f_(i+1) #</span>
- <span class="c1"># dt - time step #</span>
- <span class="c1"># fmon - monotonicity filter #</span>
- <span class="c1"># #</span>
- <span class="c1">###########################################################################</span>
-
-
- <span class="kn">import</span> <span class="nn">numpy</span> <span class="k">as</span> <span class="nn">np</span>
-
- <span class="c1"># time step</span>
- <span class="n">dt</span> <span class="o">=</span> <span class="mf">1.0</span>
-
- <span class="c1">############### Non-negative Geometric Mean Based Algorithm ###############</span>
-
- <span class="c1"># for the left boundary the following boundary condition is valid:</span>
- <span class="c1"># the value at t=0 of the interpolation algorithm coincides with the</span>
- <span class="c1"># first data value according to the persistence hypothesis</span>
- <span class="n">f</span> <span class="o">=</span> <span class="p">[</span><span class="n">g</span><span class="p">[</span><span class="mi">0</span><span class="p">]]</span>
-
- <span class="c1"># compute two first sub-grid intervals without monotonicity check</span>
- <span class="c1"># go through the data series and extend each interval by two sub-grid</span>
- <span class="c1"># points and interpolate the corresponding data values</span>
- <span class="c1"># except for the last interval due to boundary conditions</span>
- <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="mi">0</span><span class="p">,</span> <span class="mi">2</span><span class="p">):</span>
-
- <span class="c1"># as a requirement:</span>
- <span class="c1"># if there is a zero data value such that g[i]=0, then the whole</span>
- <span class="c1"># interval in f has to be zero to such that f[i+1]=f[i+2]=f[i+3]=0</span>
- <span class="c1"># according to Eq. (6)</span>
- <span class="k">if</span> <span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="o">==</span> <span class="mf">0.</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="mf">0.</span><span class="p">,</span> <span class="mf">0.</span><span class="p">,</span> <span class="mf">0.</span><span class="p">])</span>
-
- <span class="c1"># otherwise the sub-grid values are calculated and added to the list</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># temporal save of last value in interpolated list</span>
- <span class="c1"># since it is the left boundary and hence the new (fi) value</span>
- <span class="n">fi</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
-
- <span class="c1"># the value at the end of the interval (fip1) is prescribed by the</span>
- <span class="c1"># geometric mean, restricted such that non-negativity is guaranteed</span>
- <span class="c1"># according to Eq. (25)</span>
- <span class="n">fip1</span><span class="o">=</span><span class="nb">min</span><span class="p">(</span> <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="p">,</span> <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span> <span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="p">)</span>
-
- <span class="c1"># the function value at the first sub-grid point (fi1) is determined</span>
- <span class="c1"># according to the equal area condition with Eq. (19)</span>
- <span class="n">fi1</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fip1</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fi</span>
-
- <span class="c1"># the function value at the second sub-grid point (fi2) is determined</span>
- <span class="c1"># according Eq. (18)</span>
- <span class="n">fi2</span> <span class="o">=</span> <span class="n">fi1</span><span class="o">+</span><span class="mf">1.</span><span class="o">/</span><span class="mf">3.</span><span class="o">*</span><span class="p">(</span><span class="n">fip1</span><span class="o">-</span><span class="n">fi</span><span class="p">)</span>
-
- <span class="c1"># add next interval of interpolated (sub-)grid values</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi1</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi2</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fip1</span><span class="p">)</span>
-
- <span class="c1"># compute rest of the data series intervals</span>
- <span class="c1"># go through the data series and extend each interval by two sub-grid</span>
- <span class="c1"># points and interpolate the corresponding data values</span>
- <span class="c1"># except for the last interval due to boundary conditions</span>
- <span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="mi">2</span><span class="p">,</span> <span class="nb">len</span><span class="p">(</span><span class="n">g</span><span class="p">)</span><span class="o">-</span><span class="mi">1</span><span class="p">):</span>
-
- <span class="c1"># as a requirement:</span>
- <span class="c1"># if there is a zero data value such that g[i]=0, then the whole</span>
- <span class="c1"># interval in f has to be zero to such that f[i+1]=f[i+2]=f[i+3]=0</span>
- <span class="c1"># according to Eq. (6)</span>
- <span class="k">if</span> <span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="o">==</span> <span class="mf">0.</span><span class="p">:</span>
- <span class="c1"># apply monotonicity filter for interval before</span>
- <span class="c1"># check if there is "M" or "W" shape</span>
- <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span><span class="p">:</span>
-
- <span class="c1"># the monotonicity filter corrects the value at (fim1) by</span>
- <span class="c1"># substituting (fim1) with (fmon), see Eq. (27), (28) and (29)</span>
- <span class="n">fmon</span> <span class="o">=</span> <span class="nb">min</span><span class="p">(</span><span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> \
- <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> \
- <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mi">0</span><span class="p">,(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span> <span class="o">*</span>
- <span class="p">(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))))</span>
-
- <span class="c1"># recomputation of the sub-grid interval values while the</span>
- <span class="c1"># interval boundaries (fi) and (fip2) remains unchanged</span>
- <span class="c1"># see Eq. (18) and (19)</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span> <span class="o">=</span> <span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">]</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">fmon</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span><span class="o">/</span><span class="mf">3.</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="n">fmon</span><span class="p">)</span><span class="o">/</span><span class="mf">3.</span>
-
- <span class="n">f</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="mf">0.</span><span class="p">,</span><span class="mf">0.</span><span class="p">,</span><span class="mf">0.</span><span class="p">])</span>
-
- <span class="c1"># otherwise the sub-grid values are calculated and added to the list</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># temporal save of last value in interpolated list</span>
- <span class="c1"># since it is the left boundary and hence the new (fi) value</span>
- <span class="n">fi</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
-
- <span class="c1"># the value at the end of the interval (fip1) is prescribed by the</span>
- <span class="c1"># geometric mean, restricted such that non-negativity is guaranteed</span>
- <span class="c1"># according to Eq. (25)</span>
- <span class="n">fip1</span> <span class="o">=</span> <span class="nb">min</span><span class="p">(</span> <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span> <span class="p">,</span> <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span> <span class="p">,</span> <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">+</span><span class="mi">1</span><span class="p">]</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">])</span> <span class="p">)</span>
-
- <span class="c1"># the function value at the first sub-grid point (fi1) is determined</span>
- <span class="c1"># according to the equal area condition with Eq. (19)</span>
- <span class="n">fi1</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fip1</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fi</span>
-
- <span class="c1"># the function value at the second sub-grid point (fi2) is determined</span>
- <span class="c1"># according Eq. (18)</span>
- <span class="n">fi2</span> <span class="o">=</span> <span class="n">fi1</span><span class="o">+</span><span class="mf">1.</span><span class="o">/</span><span class="mf">3.</span><span class="o">*</span><span class="p">(</span><span class="n">fip1</span><span class="o">-</span><span class="n">fi</span><span class="p">)</span>
-
- <span class="c1"># apply monotonicity filter for interval before</span>
- <span class="c1"># check if there is "M" or "W" shape</span>
- <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span><span class="p">:</span>
-
- <span class="c1"># the monotonicity filter corrects the value at (fim1) by</span>
- <span class="c1"># substituting (fim1) with fmon, see Eq. (27), (28) and (29)</span>
- <span class="n">fmon</span> <span class="o">=</span> <span class="nb">min</span><span class="p">(</span><span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> \
- <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">],</span> \
- <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mi">0</span><span class="p">,(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span> <span class="o">*</span>
- <span class="p">(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))))</span>
-
- <span class="c1"># recomputation of the sub-grid interval values while the</span>
- <span class="c1"># interval boundaries (fi) and (fip2) remains unchanged</span>
- <span class="c1"># see Eq. (18) and (19)</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span> <span class="o">=</span> <span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">]</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">fmon</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span><span class="o">/</span><span class="mf">3.</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="n">i</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="n">fmon</span><span class="p">)</span><span class="o">/</span><span class="mf">3.</span>
-
- <span class="c1"># add next interval of interpolated (sub-)grid values</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi1</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi2</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fip1</span><span class="p">)</span>
-
- <span class="c1"># separate treatment of the final interval</span>
-
- <span class="c1"># as a requirement:</span>
- <span class="c1"># if there is a zero data value such that g[i]=0, then the whole</span>
- <span class="c1"># interval in f has to be zero to such that f[i+1]=f[i+2]=f[i+3]=0</span>
- <span class="c1"># according to Eq. (6)</span>
- <span class="k">if</span> <span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">==</span> <span class="mf">0.</span><span class="p">:</span>
- <span class="c1"># apply monotonicity filter for interval before</span>
- <span class="c1"># check if there is "M" or "W" shape</span>
- <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span><span class="p">:</span>
-
- <span class="c1"># the monotonicity filter corrects the value at (fim1) by</span>
- <span class="c1"># substituting (fim1) with (fmon), see Eq. (27), (28) and (29)</span>
- <span class="n">fmon</span> <span class="o">=</span> <span class="nb">min</span><span class="p">(</span><span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">],</span> \
- <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> \
- <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mi">0</span><span class="p">,(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span> <span class="o">*</span>
- <span class="p">(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))))</span>
-
- <span class="c1"># recomputation of the sub-grid interval values while the</span>
- <span class="c1"># interval boundaries (fi) and (fip2) remains unchanged</span>
- <span class="c1"># see Eq. (18) and (19)</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span> <span class="o">=</span> <span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">]</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">fmon</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span><span class="o">/</span><span class="mf">3.</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="n">fmon</span><span class="p">)</span><span class="o">/</span><span class="mf">3.</span>
-
- <span class="n">f</span><span class="o">.</span><span class="n">extend</span><span class="p">([</span><span class="mf">0.</span><span class="p">,</span><span class="mf">0.</span><span class="p">,</span><span class="mf">0.</span><span class="p">])</span>
-
- <span class="c1"># otherwise the sub-grid values are calculated and added to the list</span>
- <span class="c1"># using the persistence hypothesis as boundary condition</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># temporal save of last value in interpolated list</span>
- <span class="c1"># since it is the left boundary and hence the new (fi) value</span>
- <span class="n">fi</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
- <span class="c1"># since last interval in series, last value is also fip1</span>
- <span class="n">fip1</span> <span class="o">=</span> <span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span>
- <span class="c1"># the function value at the first sub-grid point (fi1) is determined</span>
- <span class="c1"># according to the equal area condition with Eq. (19)</span>
- <span class="n">fi1</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fip1</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fi</span>
- <span class="c1"># the function value at the second sub-grid point (fi2) is determined</span>
- <span class="c1"># according Eq. (18)</span>
- <span class="n">fi2</span> <span class="o">=</span> <span class="n">fi1</span><span class="o">+</span><span class="n">dt</span><span class="o">/</span><span class="mf">3.</span><span class="o">*</span><span class="p">(</span><span class="n">fip1</span><span class="o">-</span><span class="n">fi</span><span class="p">)</span>
-
- <span class="c1"># apply monotonicity filter for interval before</span>
- <span class="c1"># check if there is "M" or "W" shape</span>
- <span class="k">if</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span> \
- <span class="ow">and</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">])</span> <span class="o">*</span> <span class="n">np</span><span class="o">.</span><span class="n">sign</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">])</span> <span class="o">==</span> <span class="o">-</span><span class="mi">1</span><span class="p">:</span>
-
- <span class="c1"># the monotonicity filter corrects the value at (fim1) by</span>
- <span class="c1"># substituting (fim1) with (fmon), see Eq. (27), (28) and (29)</span>
- <span class="n">fmon</span> <span class="o">=</span> <span class="nb">min</span><span class="p">(</span><span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">],</span> \
- <span class="mf">3.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">],</span> \
- <span class="n">np</span><span class="o">.</span><span class="n">sqrt</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mi">0</span><span class="p">,(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span> <span class="o">*</span>
- <span class="p">(</span><span class="mf">18.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">-</span> <span class="mf">5.</span><span class="o">/</span><span class="mf">13.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]))))</span>
-
- <span class="c1"># recomputation of the sub-grid interval values while the</span>
- <span class="c1"># interval boundaries (fi) and (fip2) remains unchanged</span>
- <span class="c1"># see Eq. (18) and (19)</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">4</span><span class="p">]</span> <span class="o">=</span> <span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">]</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">6</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">fmon</span><span class="o">-</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">7</span><span class="p">])</span><span class="o">/</span><span class="mf">3.</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span> <span class="o">=</span> <span class="mf">3.</span><span class="o">/</span><span class="mf">2.</span><span class="o">*</span><span class="n">g</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span><span class="o">-</span><span class="mf">5.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="mf">1.</span><span class="o">/</span><span class="mf">12.</span><span class="o">*</span><span class="n">fmon</span>
- <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">2</span><span class="p">]</span> <span class="o">=</span> <span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">3</span><span class="p">]</span><span class="o">+</span><span class="p">(</span><span class="n">f</span><span class="p">[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span><span class="o">-</span><span class="n">fmon</span><span class="p">)</span><span class="o">/</span><span class="mf">3.</span>
-
- <span class="c1"># add next interval of interpolated (sub-)grid values</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi1</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fi2</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">fip1</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">f</span></div>
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- <h1>Source code for get_mars_data</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - moved the getEIdata program into a function "get_mars_data"</span>
-<span class="c1"># - moved the AgurmentParser into a seperate function</span>
-<span class="c1"># - adatpted the function for the use in flex_extract</span>
-<span class="c1"># - renamed file to get_mars_data</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added structured documentation</span>
-<span class="c1"># - minor changes in programming style for consistence</span>
-<span class="c1"># - added function main and moved function calls vom __main__ there</span>
-<span class="c1"># (necessary for better documentation with docstrings for later</span>
-<span class="c1"># online documentation)</span>
-<span class="c1"># - use of UIFiles class for file selection and deletion</span>
-<span class="c1"># - seperated get_mars_data function into several smaller pieces:</span>
-<span class="c1"># write_reqheader, mk_server, mk_dates, remove_old, do_retrievment</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''This script extracts MARS data from ECMWF servers.</span>
-
-<span class="sd">At first, the necessary parameters from command line and CONTROL files are</span>
-<span class="sd">extracted. They define the data set to be extracted from MARS.</span>
-
-<span class="sd">This file can also be imported as a module and contains the following</span>
-<span class="sd">functions:</span>
-
-<span class="sd"> * main - the main function of the script</span>
-<span class="sd"> * get_mars_data - overall control of ECMWF data retrievment</span>
-<span class="sd"> * write_reqheader - writes the header into the mars_request file</span>
-<span class="sd"> * mk_server - creates the server connection to ECMWF servers</span>
-<span class="sd"> * mk_dates - defines the start and end date</span>
-<span class="sd"> * remove_old - deletes old retrieved grib files</span>
-<span class="sd"> * do_retrievement - creates individual retrievals</span>
-
-<span class="sd">Type: get_mars_data.py --help</span>
-<span class="sd">to get information about command line parameters.</span>
-<span class="sd">Read the documentation for usage instructions.</span>
-<span class="sd">'''</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">inspect</span>
-<span class="kn">from</span> <span class="nn">datetime</span> <span class="k">import</span> <span class="n">datetime</span><span class="p">,</span> <span class="n">timedelta</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="c1"># add path to local main python path for flex_extract to get full access</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span>
- <span class="n">inspect</span><span class="o">.</span><span class="n">getfile</span><span class="p">(</span><span class="n">inspect</span><span class="o">.</span><span class="n">currentframe</span><span class="p">())))</span> <span class="o">+</span> <span class="s1">'/../'</span><span class="p">)</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">setup_controldata</span><span class="p">,</span> <span class="n">my_error</span><span class="p">,</span> <span class="n">normal_exit</span><span class="p">,</span> <span class="n">get_cmdline_args</span><span class="p">,</span>
- <span class="n">read_ecenv</span><span class="p">,</span> <span class="n">make_dir</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">classes.EcFlexpart</span> <span class="k">import</span> <span class="n">EcFlexpart</span>
-<span class="kn">from</span> <span class="nn">classes.UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
-<span class="kn">from</span> <span class="nn">classes.MarsRetrieval</span> <span class="k">import</span> <span class="n">MarsRetrieval</span>
-
-<span class="k">try</span><span class="p">:</span>
- <span class="n">ec_api</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="kn">import</span> <span class="nn">ecmwfapi</span>
-<span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
- <span class="n">ec_api</span> <span class="o">=</span> <span class="kc">False</span>
-
-<span class="k">try</span><span class="p">:</span>
- <span class="n">cds_api</span> <span class="o">=</span> <span class="kc">True</span>
- <span class="kn">import</span> <span class="nn">cdsapi</span>
-<span class="k">except</span> <span class="ne">ImportError</span><span class="p">:</span>
- <span class="n">cds_api</span> <span class="o">=</span> <span class="kc">False</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># FUNCTION</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="main"><a class="viewcode-back" href="../api.html#get_mars_data.main">[docs]</a><span class="k">def</span> <span class="nf">main</span><span class="p">():</span>
- <span class="sd">'''Controls the program to get data out of mars.</span>
-
-<span class="sd"> This is done if it is called directly from command line.</span>
-<span class="sd"> Then it also takes program call arguments and control file input.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">c</span><span class="p">,</span> <span class="n">_</span><span class="p">,</span> <span class="n">_</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="n">setup_controldata</span><span class="p">()</span>
- <span class="n">get_mars_data</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
- <span class="n">normal_exit</span><span class="p">(</span><span class="s1">'Retrieving MARS data: Done!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="get_mars_data"><a class="viewcode-back" href="../api.html#get_mars_data.get_mars_data">[docs]</a><span class="k">def</span> <span class="nf">get_mars_data</span><span class="p">(</span><span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Retrieves the EC data needed for a FLEXPART simulation.</span>
-
-<span class="sd"> Start and end dates for retrieval period is set. Retrievals</span>
-<span class="sd"> are divided into smaller periods if necessary and datechunk parameter</span>
-<span class="sd"> is set.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">c</span><span class="o">.</span><span class="n">ec_api</span> <span class="o">=</span> <span class="n">ec_api</span>
- <span class="n">c</span><span class="o">.</span><span class="n">cds_api</span> <span class="o">=</span> <span class="n">cds_api</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">):</span>
- <span class="n">make_dir</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Retrieving EC data!"</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">1</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Printing mars requests!"</span><span class="p">)</span>
- <span class="k">elif</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Retrieving EC data and printing mars request!"</span><span class="p">)</span>
- <span class="n">write_reqheader</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">_config</span><span class="o">.</span><span class="n">FILE_MARS_REQUESTS</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s2">"start date </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"end date </span><span class="si">%s</span><span class="s2"> "</span> <span class="o">%</span> <span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">))</span>
-
- <span class="n">server</span> <span class="o">=</span> <span class="n">mk_server</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="c1"># if data are to be retrieved, clean up any old grib files</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">0</span> <span class="ow">or</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="n">remove_old</span><span class="p">(</span><span class="s1">'*grb'</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
-
- <span class="c1"># -------------- flux data ------------------------------------------------</span>
- <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">datechunk</span> <span class="o">=</span> <span class="n">mk_dates</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
- <span class="n">do_retrievement</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">server</span><span class="p">,</span> <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">datechunk</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
-
- <span class="c1"># -------------- non flux data --------------------------------------------</span>
- <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">datechunk</span> <span class="o">=</span> <span class="n">mk_dates</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">do_retrievement</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">server</span><span class="p">,</span> <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">datechunk</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="write_reqheader"><a class="viewcode-back" href="../api.html#get_mars_data.write_reqheader">[docs]</a><span class="k">def</span> <span class="nf">write_reqheader</span><span class="p">(</span><span class="n">marsfile</span><span class="p">):</span>
- <span class="sd">'''Writes header with column names into mars request file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> marsfile : str</span>
-<span class="sd"> Path to the mars request file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">MR</span> <span class="o">=</span> <span class="n">MarsRetrieval</span><span class="p">(</span><span class="kc">None</span><span class="p">,</span> <span class="kc">None</span><span class="p">)</span>
- <span class="n">attrs</span> <span class="o">=</span> <span class="nb">vars</span><span class="p">(</span><span class="n">MR</span><span class="p">)</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'server'</span><span class="p">]</span>
- <span class="k">del</span> <span class="n">attrs</span><span class="p">[</span><span class="s1">'public'</span><span class="p">]</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">marsfile</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">'request_number'</span> <span class="o">+</span> <span class="s1">', '</span><span class="p">)</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">', '</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">key</span><span class="p">)</span> <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="nb">sorted</span><span class="p">(</span><span class="n">attrs</span><span class="o">.</span><span class="n">iterkeys</span><span class="p">())))</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_server"><a class="viewcode-back" href="../api.html#get_mars_data.mk_server">[docs]</a><span class="k">def</span> <span class="nf">mk_server</span><span class="p">(</span><span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Creates a server connection with available python API.</span>
-
-<span class="sd"> Which API is used depends on availability and the dataset to be retrieved.</span>
-<span class="sd"> The CDS API is used for ERA5 dataset no matter if the user is a member or</span>
-<span class="sd"> a public user. ECMWF WebAPI is used for all other available datasets.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> server : ECMWFDataServer, ECMWFService or Client</span>
-<span class="sd"> Connection to ECMWF server via python interface ECMWF WebAPI or CDS API.</span>
-
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="n">cds_api</span> <span class="ow">and</span> <span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">marsclass</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'EA'</span><span class="p">):</span>
- <span class="n">server</span> <span class="o">=</span> <span class="n">cdsapi</span><span class="o">.</span><span class="n">Client</span><span class="p">()</span>
- <span class="n">c</span><span class="o">.</span><span class="n">ec_api</span> <span class="o">=</span> <span class="kc">False</span>
- <span class="k">elif</span> <span class="n">c</span><span class="o">.</span><span class="n">ec_api</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">public</span><span class="p">:</span>
- <span class="n">server</span> <span class="o">=</span> <span class="n">ecmwfapi</span><span class="o">.</span><span class="n">ECMWFDataServer</span><span class="p">()</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">server</span> <span class="o">=</span> <span class="n">ecmwfapi</span><span class="o">.</span><span class="n">ECMWFService</span><span class="p">(</span><span class="s2">"mars"</span><span class="p">)</span>
- <span class="n">c</span><span class="o">.</span><span class="n">cds_api</span> <span class="o">=</span> <span class="kc">False</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">server</span> <span class="o">=</span> <span class="kc">False</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Using ECMWF WebAPI: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ec_api</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Using CDS API: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">cds_api</span><span class="p">))</span>
-
- <span class="k">return</span> <span class="n">server</span></div>
-
-
-<div class="viewcode-block" id="check_dates_for_nonflux_fc_times"><a class="viewcode-back" href="../api.html#get_mars_data.check_dates_for_nonflux_fc_times">[docs]</a><span class="k">def</span> <span class="nf">check_dates_for_nonflux_fc_times</span><span class="p">(</span><span class="n">types</span><span class="p">,</span> <span class="n">times</span><span class="p">):</span>
- <span class="sd">'''</span>
-<span class="sd"> '''</span>
- <span class="k">for</span> <span class="n">ty</span><span class="p">,</span> <span class="n">ti</span> <span class="ow">in</span> <span class="nb">zip</span><span class="p">(</span><span class="n">types</span><span class="p">,</span><span class="n">times</span><span class="p">):</span>
- <span class="k">if</span> <span class="n">ty</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'FC'</span> <span class="ow">and</span> <span class="nb">int</span><span class="p">(</span><span class="n">ti</span><span class="p">)</span> <span class="o">==</span> <span class="mi">18</span><span class="p">:</span>
- <span class="k">return</span> <span class="kc">True</span>
- <span class="k">return</span> <span class="kc">False</span></div>
-
-
-<div class="viewcode-block" id="mk_dates"><a class="viewcode-back" href="../api.html#get_mars_data.mk_dates">[docs]</a><span class="k">def</span> <span class="nf">mk_dates</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="p">):</span>
- <span class="sd">'''Prepares start and end date depending on flux or non flux data.</span>
-
-<span class="sd"> If forecast for maximum one day (upto 24h) are to be retrieved, then</span>
-<span class="sd"> collect accumulation data (flux data) with additional days in the</span>
-<span class="sd"> beginning and at the end (used for complete disaggregation of</span>
-<span class="sd"> original period)</span>
-
-<span class="sd"> If forecast data longer than 24h are to be retrieved, then</span>
-<span class="sd"> collect accumulation data (flux data) with the exact start and end date</span>
-<span class="sd"> (disaggregation will be done for the exact time period with</span>
-<span class="sd"> boundary conditions)</span>
-
-<span class="sd"> Since for basetime the extraction contains the 12 hours upfront,</span>
-<span class="sd"> if basetime is 0, the starting date has to be the day before and</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> fluxes : boolean, optional</span>
-<span class="sd"> Decides if the flux parameter settings are stored or</span>
-<span class="sd"> the rest of the parameter list.</span>
-<span class="sd"> Default value is False.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> start : datetime</span>
-<span class="sd"> The start date of the retrieving data set.</span>
-
-<span class="sd"> end : datetime</span>
-<span class="sd"> The end date of the retrieving data set.</span>
-
-<span class="sd"> chunk : datetime</span>
-<span class="sd"> Time period in days for one single mars retrieval.</span>
-
-<span class="sd"> '''</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">end</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">chunk</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">date_chunk</span><span class="p">))</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">-</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span> <span class="ow">and</span> <span class="n">fluxes</span> <span class="ow">and</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">-</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
- <span class="n">end</span> <span class="o">=</span> <span class="n">end</span> <span class="o">+</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="c1"># if we have non-flux forecast data starting at 18 UTC</span>
- <span class="c1"># we need to start retrieving data one day in advance</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">fluxes</span> <span class="ow">and</span> <span class="n">check_dates_for_nonflux_fc_times</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">type</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">time</span><span class="p">):</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">-</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">chunk</span></div>
-
-<div class="viewcode-block" id="remove_old"><a class="viewcode-back" href="../api.html#get_mars_data.remove_old">[docs]</a><span class="k">def</span> <span class="nf">remove_old</span><span class="p">(</span><span class="n">pattern</span><span class="p">,</span> <span class="n">inputdir</span><span class="p">):</span>
- <span class="sd">'''Deletes old retrieval files from current input directory</span>
-<span class="sd"> matching the pattern.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> pattern : str</span>
-<span class="sd"> The sub string pattern which identifies the files to be deleted.</span>
-
-<span class="sd"> inputdir : str, optional</span>
-<span class="sd"> Path to the directory where the retrieved data is stored.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... removing old content of '</span> <span class="o">+</span> <span class="n">inputdir</span><span class="p">)</span>
-
- <span class="n">tobecleaned</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">pattern</span><span class="p">)</span>
- <span class="n">tobecleaned</span><span class="o">.</span><span class="n">delete_files</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="do_retrievement"><a class="viewcode-back" href="../api.html#get_mars_data.do_retrievement">[docs]</a><span class="k">def</span> <span class="nf">do_retrievement</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">server</span><span class="p">,</span> <span class="n">start</span><span class="p">,</span> <span class="n">end</span><span class="p">,</span> <span class="n">delta_t</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">):</span>
- <span class="sd">'''Divides the complete retrieval period in smaller chunks and</span>
-<span class="sd"> retrieves the data from MARS.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> server : ECMWFService or ECMWFDataServer</span>
-<span class="sd"> The server connection to ECMWF.</span>
-
-<span class="sd"> start : datetime</span>
-<span class="sd"> The start date of the retrieval.</span>
-
-<span class="sd"> end : datetime</span>
-<span class="sd"> The end date of the retrieval.</span>
-
-<span class="sd"> delta_t : datetime</span>
-<span class="sd"> Delta_t + 1 is the maximal time period of a single</span>
-<span class="sd"> retrieval.</span>
-
-<span class="sd"> fluxes : boolean, optional</span>
-<span class="sd"> Decides if the flux parameters are to be retrieved or</span>
-<span class="sd"> the rest of the parameter list.</span>
-<span class="sd"> Default value is False.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="c1"># since actual day also counts as one day,</span>
- <span class="c1"># we only need to add datechunk - 1 days to retrieval</span>
- <span class="c1"># for a period</span>
- <span class="n">delta_t_m1</span> <span class="o">=</span> <span class="n">delta_t</span> <span class="o">-</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="n">day</span> <span class="o">=</span> <span class="n">start</span>
- <span class="k">while</span> <span class="n">day</span> <span class="o"><=</span> <span class="n">end</span><span class="p">:</span>
- <span class="n">flexpart</span> <span class="o">=</span> <span class="n">EcFlexpart</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="p">)</span>
- <span class="n">tmpday</span> <span class="o">=</span> <span class="n">day</span> <span class="o">+</span> <span class="n">delta_t_m1</span>
- <span class="k">if</span> <span class="n">tmpday</span> <span class="o"><</span> <span class="n">end</span><span class="p">:</span>
- <span class="n">dates</span> <span class="o">=</span> <span class="n">day</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span> <span class="o">+</span> <span class="s2">"/to/"</span> <span class="o">+</span> \
- <span class="n">tmpday</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">dates</span> <span class="o">=</span> <span class="n">day</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span> <span class="o">+</span> <span class="s2">"/to/"</span> <span class="o">+</span> \
- <span class="n">end</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... retrieve "</span> <span class="o">+</span> <span class="n">dates</span> <span class="o">+</span> <span class="s2">" in dir "</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">retrieve</span><span class="p">(</span><span class="n">server</span><span class="p">,</span> <span class="n">dates</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">public</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">IOError</span><span class="p">:</span>
- <span class="n">my_error</span><span class="p">(</span><span class="s1">'MARS request failed'</span><span class="p">)</span>
-
- <span class="n">day</span> <span class="o">+=</span> <span class="n">delta_t</span>
-
- <span class="k">return</span></div>
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s2">"__main__"</span><span class="p">:</span>
- <span class="n">main</span><span class="p">()</span>
-</pre></div>
-
- </div>
-
- </div>
- <footer>
-
-
- <hr/>
-
- <div role="contentinfo">
- <p>
- © Copyright 2018, Anne Philipp and Leopold Haimberger.
-
- </p>
- </div>
- Built with <a href="http://sphinx-doc.org/">Sphinx</a> using a <a href="https://github.com/rtfd/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
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-
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- </div>
-
- </section>
-
- </div>
-
-
-
-
-
- <script type="text/javascript">
- var DOCUMENTATION_OPTIONS = {
- URL_ROOT:'../',
- VERSION:'7.1 alpha',
- LANGUAGE:'None',
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-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
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- <hr/>
-</div>
- <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
- <div itemprop="articleBody">
-
- <h1>All modules for which code is available</h1>
-<ul><li><a href="ControlFile.html">ControlFile</a></li>
-<li><a href="EcFlexpart.html">EcFlexpart</a></li>
-<li><a href="GribUtil.html">GribUtil</a></li>
-<li><a href="MarsRetrieval.html">MarsRetrieval</a></li>
-<li><a href="UioFiles.html">UioFiles</a></li>
-<li><a href="disaggregation.html">disaggregation</a></li>
-<li><a href="get_mars_data.html">get_mars_data</a></li>
-<li><a href="install.html">install</a></li>
-<li><a href="prepare_flexpart.html">prepare_flexpart</a></li>
-<li><a href="submit.html">submit</a></li>
-<li><a href="tools.html">tools</a></li>
-</ul>
-
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-
- </div>
- <footer>
-
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- <hr/>
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- <p>
- © Copyright 2018, Anne Philipp and Leopold Haimberger.
-
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- Built with <a href="http://sphinx-doc.org/">Sphinx</a> using a <a href="https://github.com/rtfd/sphinx_rtd_theme">theme</a> provided by <a href="https://readthedocs.org">Read the Docs</a>.
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-
- <h1>Source code for install</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Leopold Haimberger (University of Vienna)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: November 2015</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - moved install_args_and_control in here</span>
-<span class="c1"># - splitted code in smaller functions</span>
-<span class="c1"># - delete convert build files in here instead of compile job script</span>
-<span class="c1"># - changed static path names to variables from config file</span>
-<span class="c1"># - splitted install function into several smaller pieces</span>
-<span class="c1"># - use of tarfile package in python</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#</span>
-<span class="c1"># @Methods:</span>
-<span class="c1"># main</span>
-<span class="c1"># get_install_cmdline_args</span>
-<span class="c1"># install_via_gateway</span>
-<span class="c1"># check_install_conditions</span>
-<span class="c1"># mk_tarball</span>
-<span class="c1"># un_tarball</span>
-<span class="c1"># mk_env_vars</span>
-<span class="c1"># mk_compilejob</span>
-<span class="c1"># mk_job_template</span>
-<span class="c1"># del_convert_build</span>
-<span class="c1"># mk_convert_build</span>
-<span class="c1">#</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''This script installs the flex_extract program.</span>
-
-<span class="sd">Depending on the selected installation environment (locally or on the</span>
-<span class="sd">ECMWF server ecgate or cca) the program extracts the commandline</span>
-<span class="sd">arguments and the CONTROL file parameter and prepares the corresponding</span>
-<span class="sd">environment.</span>
-<span class="sd">The necessary files are collected in a tar-ball and placed</span>
-<span class="sd">at the target location. There its untared, the environment variables will</span>
-<span class="sd">be set and the Fortran code will be compiled.</span>
-<span class="sd">If the ECMWF environment is selected a job script is prepared and submitted</span>
-<span class="sd">for the remaining configurations after putting the tar-ball to the</span>
-<span class="sd">target ECMWF server.</span>
-
-<span class="sd">Type: install.py --help</span>
-<span class="sd">to get information about command line parameters.</span>
-<span class="sd">Read the documentation for usage instructions.</span>
-<span class="sd">'''</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">glob</span>
-<span class="kn">import</span> <span class="nn">subprocess</span>
-<span class="kn">import</span> <span class="nn">inspect</span>
-<span class="kn">import</span> <span class="nn">tarfile</span>
-<span class="kn">from</span> <span class="nn">argparse</span> <span class="k">import</span> <span class="n">ArgumentParser</span><span class="p">,</span> <span class="n">ArgumentDefaultsHelpFormatter</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
-<span class="kn">from</span> <span class="nn">classes.UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
-<span class="kn">from</span> <span class="nn">mods.tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">make_dir</span><span class="p">,</span> <span class="n">put_file_to_ecserver</span><span class="p">,</span> <span class="n">submit_job_to_ecserver</span><span class="p">,</span>
- <span class="n">silent_remove</span><span class="p">,</span> <span class="n">execute_subprocess</span><span class="p">)</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># FUNCTIONS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="main"><a class="viewcode-back" href="../api.html#install.main">[docs]</a><span class="k">def</span> <span class="nf">main</span><span class="p">():</span>
- <span class="sd">'''Controls the installation process. Calls the installation function</span>
-<span class="sd"> if target is specified.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> '''</span>
-
- <span class="n">args</span> <span class="o">=</span> <span class="n">get_install_cmdline_args</span><span class="p">()</span>
- <span class="n">c</span> <span class="o">=</span> <span class="n">ControlFile</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">controlfile</span><span class="p">)</span>
- <span class="n">c</span><span class="o">.</span><span class="n">assign_args_to_control</span><span class="p">(</span><span class="n">args</span><span class="p">)</span>
- <span class="n">check_install_conditions</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="n">install_via_gateway</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="get_install_cmdline_args"><a class="viewcode-back" href="../api.html#install.get_install_cmdline_args">[docs]</a><span class="k">def</span> <span class="nf">get_install_cmdline_args</span><span class="p">():</span>
- <span class="sd">'''Decomposes the command line arguments and assigns them to variables.</span>
-<span class="sd"> Apply default values for non mentioned arguments.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> args : Namespace</span>
-<span class="sd"> Contains the commandline arguments from script/program call.</span>
-<span class="sd"> '''</span>
- <span class="n">parser</span> <span class="o">=</span> <span class="n">ArgumentParser</span><span class="p">(</span><span class="n">description</span><span class="o">=</span><span class="s1">'Install flex_extract software locally or </span><span class="se">\</span>
-<span class="s1"> on ECMWF machines'</span><span class="p">,</span>
- <span class="n">formatter_class</span><span class="o">=</span><span class="n">ArgumentDefaultsHelpFormatter</span><span class="p">)</span>
-
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s1">'--target'</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s1">'install_target'</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"Valid targets: local | ecgate | cca , </span><span class="se">\</span>
-<span class="s2"> the latter two are at ECMWF"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--makefile"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"makefile"</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s1">'Name of Makefile to use for compiling CONVERT2'</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--ecuid"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"ecuid"</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s1">'user id at ECMWF'</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--ecgid"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"ecgid"</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s1">'group id at ECMWF'</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--gateway"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"gateway"</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s1">'name of local gateway server'</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--destination"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"destination"</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s1">'ecaccess destination, e.g. leo@genericSftp'</span><span class="p">)</span>
-
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--flexpartdir"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"flexpartdir"</span><span class="p">,</span>
- <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span> <span class="n">help</span><span class="o">=</span><span class="s2">"FLEXPART root directory on ECMWF </span><span class="se">\</span>
-<span class="s2"> servers (to find grib2flexpart and COMMAND file)</span><span class="se">\n\</span>
-<span class="s2"> Normally flex_extract resides in the scripts directory </span><span class="se">\</span>
-<span class="s2"> of the FLEXPART distribution."</span><span class="p">)</span>
-
- <span class="c1"># arguments for job submission to ECMWF, only needed by submit.py</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--job_template"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s1">'job_template'</span><span class="p">,</span>
- <span class="n">default</span><span class="o">=</span><span class="s2">"job.temp.o"</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"job template file for submission to ECMWF"</span><span class="p">)</span>
-
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--controlfile"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"controlfile"</span><span class="p">,</span>
- <span class="n">default</span><span class="o">=</span><span class="s1">'CONTROL.temp'</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"file with CONTROL parameters"</span><span class="p">)</span>
-
- <span class="n">args</span> <span class="o">=</span> <span class="n">parser</span><span class="o">.</span><span class="n">parse_args</span><span class="p">()</span>
-
- <span class="k">return</span> <span class="n">args</span></div>
-
-
-<div class="viewcode-block" id="install_via_gateway"><a class="viewcode-back" href="../api.html#install.install_via_gateway">[docs]</a><span class="k">def</span> <span class="nf">install_via_gateway</span><span class="p">(</span><span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Perform the actual installation on local machine or prepare data</span>
-<span class="sd"> transfer to remote gate and submit a job script which will</span>
-<span class="sd"> install everything on the remote gate.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">import</span> <span class="nn">tarfile</span>
-
- <span class="n">ecd</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FLEXEXTRACT_DIR</span>
- <span class="n">tarball_name</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">FLEXEXTRACT_DIRNAME</span> <span class="o">+</span> <span class="s1">'.tar'</span>
- <span class="n">tar_file</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">ecd</span><span class="p">,</span> <span class="n">tarball_name</span><span class="p">)</span>
-
- <span class="n">target_dirname</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">FLEXEXTRACT_DIRNAME</span>
- <span class="n">fortran_executable</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">FORTRAN_EXECUTABLE</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">!=</span> <span class="s1">'local'</span><span class="p">:</span> <span class="c1"># ecgate or cca</span>
-
- <span class="n">mk_compilejob</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">makefile</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span><span class="p">,</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">)</span>
-
- <span class="n">mk_job_template</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span><span class="p">,</span>
- <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">)</span>
-
- <span class="n">mk_env_vars</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">)</span>
-
- <span class="n">mk_tarball</span><span class="p">(</span><span class="n">tar_file</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">)</span>
-
- <span class="n">put_file_to_ecserver</span><span class="p">(</span><span class="n">ecd</span><span class="p">,</span> <span class="n">tarball_name</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">,</span>
- <span class="n">c</span><span class="o">.</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span><span class="p">)</span>
-
- <span class="n">submit_job_to_ecserver</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">,</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_JOBSCRIPTS</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FILE_INSTALL_COMPILEJOB</span><span class="p">))</span>
-
- <span class="n">silent_remove</span><span class="p">(</span><span class="n">tar_file</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'job compilation script has been submitted to ecgate for '</span> <span class="o">+</span>
- <span class="s1">'installation in '</span> <span class="o">+</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">+</span>
- <span class="s1">'/'</span> <span class="o">+</span> <span class="n">target_dirname</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'You should get an email with subject "flexcompile" within '</span> <span class="o">+</span>
- <span class="s1">'the next few minutes!'</span><span class="p">)</span>
-
- <span class="k">else</span><span class="p">:</span> <span class="c1">#local</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">==</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FLEXEXTRACT_DIR</span> <span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'WARNING: FLEXPARTDIR has not been specified'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'flex_extract will be installed in here by compiling the '</span> <span class="o">+</span>
- <span class="s1">'Fortran source in '</span> <span class="o">+</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FORTRAN_SRC</span><span class="p">)</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_FORTRAN_SRC</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span> <span class="c1"># creates the target working directory for flex_extract</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expanduser</span><span class="p">(</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">))</span>
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">ecd</span><span class="p">)</span> <span class="o">!=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">):</span>
- <span class="n">mk_tarball</span><span class="p">(</span><span class="n">tar_file</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">)</span>
- <span class="n">make_dir</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">,</span>
- <span class="n">target_dirname</span><span class="p">))</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">,</span>
- <span class="n">target_dirname</span><span class="p">))</span>
- <span class="n">un_tarball</span><span class="p">(</span><span class="n">tar_file</span><span class="p">)</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">,</span>
- <span class="n">target_dirname</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_FORTRAN_SRC</span><span class="p">))</span>
-
- <span class="c1"># Create Fortran executable - CONVERT2</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Install '</span> <span class="o">+</span> <span class="n">target_dirname</span> <span class="o">+</span> <span class="s1">' software at '</span> <span class="o">+</span>
- <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="o">+</span> <span class="s1">' in directory '</span> <span class="o">+</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="n">del_convert_build</span><span class="p">(</span><span class="s1">'.'</span><span class="p">)</span>
- <span class="n">mk_convert_build</span><span class="p">(</span><span class="s1">'.'</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">makefile</span><span class="p">)</span>
-
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">ecd</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">tar_file</span><span class="p">):</span>
- <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">tar_file</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="check_install_conditions"><a class="viewcode-back" href="../api.html#install.check_install_conditions">[docs]</a><span class="k">def</span> <span class="nf">check_install_conditions</span><span class="p">(</span><span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Checks a couple of necessary attributes and conditions</span>
-<span class="sd"> for the installation such as if they exist and contain values.</span>
-<span class="sd"> Otherwise set default values.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="ow">and</span> \
- <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="ow">not</span> <span class="ow">in</span> <span class="n">_config</span><span class="o">.</span><span class="n">INSTALL_TARGETS</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'ERROR: unknown or missing installation target '</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'target: '</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'please specify correct installation target '</span> <span class="o">+</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">INSTALL_TARGETS</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'use -h or --help for help'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="ow">and</span> <span class="n">c</span><span class="o">.</span><span class="n">install_target</span> <span class="o">!=</span> <span class="s1">'local'</span><span class="p">:</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecgid</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">ecuid</span> <span class="ow">or</span> \
- <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">gateway</span> <span class="ow">or</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">destination</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Please enter your ECMWF user id and group id as well '</span> <span class="o">+</span>
- <span class="s1">'as the </span><span class="se">\n</span><span class="s1">name of the local gateway and the ectrans '</span> <span class="o">+</span>
- <span class="s1">'destination '</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'with command line options --ecuid --ecgid </span><span class="se">\</span>
-<span class="s1"> --gateway --destination'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Try "'</span> <span class="o">+</span> <span class="n">sys</span><span class="o">.</span><span class="n">argv</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)[</span><span class="o">-</span><span class="mi">1</span><span class="p">]</span> <span class="o">+</span> \
- <span class="s1">' -h" to print usage information'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Please consult ecaccess documentation or ECMWF user </span><span class="se">\</span>
-<span class="s1"> support for further details'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="s1">'$</span><span class="si">{HOME}</span><span class="s1">'</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span>
- <span class="k">else</span><span class="p">:</span> <span class="c1"># local</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">flexpartdir</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FLEXEXTRACT_DIR</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="mk_tarball"><a class="viewcode-back" href="../api.html#install.mk_tarball">[docs]</a><span class="k">def</span> <span class="nf">mk_tarball</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">,</span> <span class="n">target</span><span class="p">):</span>
- <span class="sd">'''Creates a tarball with all necessary files which need to be sent to the</span>
-<span class="sd"> installation directory.</span>
-<span class="sd"> It does not matter if this is local or remote.</span>
-<span class="sd"> Collects all python files, the Fortran source and makefiles,</span>
-<span class="sd"> the ECMWF_ENV file, the CONTROL files as well as the</span>
-<span class="sd"> template files.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> tarball_path : str</span>
-<span class="sd"> The complete path to the tar file which will contain all</span>
-<span class="sd"> relevant data for flex_extract.</span>
-
-<span class="sd"> target : str</span>
-<span class="sd"> The queue where the job is submitted to.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">glob</span> <span class="k">import</span> <span class="n">glob</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Create tarball ...'</span><span class="p">)</span>
-
- <span class="c1"># change to FLEXEXTRACT directory so that the tar can contain</span>
- <span class="c1"># relative pathes to the files and directories</span>
- <span class="n">ecd</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">PATH_FLEXEXTRACT_DIR</span> <span class="o">+</span> <span class="s1">'/'</span>
- <span class="n">os</span><span class="o">.</span><span class="n">chdir</span><span class="p">(</span><span class="n">ecd</span><span class="p">)</span>
-
- <span class="c1"># get lists of the files to be added to the tar file</span>
- <span class="k">if</span> <span class="n">target</span> <span class="o">==</span> <span class="s1">'local'</span><span class="p">:</span>
- <span class="n">ECMWF_ENV_FILE</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="n">runfile</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_RUN_DIR</span><span class="p">,</span>
- <span class="s1">'run_local.sh'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">ECMWF_ENV_FILE</span> <span class="o">=</span> <span class="p">[</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_ECMWF_ENV</span><span class="p">]</span>
- <span class="n">runfile</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_RUN_DIR</span><span class="p">,</span>
- <span class="s1">'run.sh'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
-
- <span class="n">pyfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_PYTHON_SRC</span><span class="p">,</span> <span class="s1">'*py'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">pytestfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_PYTHONTEST_SRC</span><span class="p">,</span> <span class="s1">'*py'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">controlfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_CONTROLFILES</span><span class="p">,</span>
- <span class="s1">'CONTROL*'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">testfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_TEST</span> <span class="p">,</span> <span class="s1">'*'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">tempfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_TEMPLATES</span> <span class="p">,</span> <span class="s1">'*.temp'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">nlfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_TEMPLATES</span> <span class="p">,</span> <span class="s1">'*.nl'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">gribtable</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_TEMPLATES</span> <span class="p">,</span> <span class="s1">'*grib*'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">ffiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_FORTRAN_SRC</span><span class="p">,</span> <span class="s1">'*.f*'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">hfiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_FORTRAN_SRC</span><span class="p">,</span> <span class="s1">'*.h'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">makefiles</span> <span class="o">=</span> <span class="p">[</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">relpath</span><span class="p">(</span><span class="n">x</span><span class="p">,</span> <span class="n">ecd</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_FORTRAN_SRC</span><span class="p">,</span> <span class="s1">'Makefile*'</span><span class="p">)</span><span class="o">.</span><span class="n">files</span><span class="p">]</span>
- <span class="n">jobdir</span> <span class="o">=</span> <span class="p">[</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_JOBSCRIPTS</span><span class="p">]</span>
-
- <span class="c1"># concatenate single lists to one for a better looping</span>
- <span class="n">filelist</span> <span class="o">=</span> <span class="n">pyfiles</span> <span class="o">+</span> <span class="n">pytestfiles</span> <span class="o">+</span> <span class="n">controlfiles</span> <span class="o">+</span> <span class="n">tempfiles</span> <span class="o">+</span> <span class="n">nlfiles</span> <span class="o">+</span> \
- <span class="n">ffiles</span> <span class="o">+</span> <span class="n">gribtable</span> <span class="o">+</span> <span class="n">hfiles</span> <span class="o">+</span> <span class="n">makefiles</span> <span class="o">+</span> <span class="n">ECMWF_ENV_FILE</span> <span class="o">+</span> \
- <span class="n">runfile</span> <span class="o">+</span> <span class="n">jobdir</span> <span class="o">+</span> <span class="n">testfiles</span> <span class="o">+</span>\
- <span class="p">[</span><span class="s1">'CODE_OF_CONDUCT.md'</span><span class="p">,</span> <span class="s1">'LICENSE.md'</span><span class="p">,</span> <span class="s1">'README.md'</span><span class="p">]</span>
-
- <span class="c1"># create installation tar-file</span>
- <span class="n">exclude_files</span> <span class="o">=</span> <span class="p">[</span><span class="s2">".ksh"</span><span class="p">]</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="n">tarfile</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">,</span> <span class="s2">"w:gz"</span><span class="p">)</span> <span class="k">as</span> <span class="n">tar_handle</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">file</span> <span class="ow">in</span> <span class="n">filelist</span><span class="p">:</span>
- <span class="n">tar_handle</span><span class="o">.</span><span class="n">add</span><span class="p">(</span><span class="n">file</span><span class="p">,</span> <span class="n">recursive</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
- <span class="nb">filter</span><span class="o">=</span><span class="k">lambda</span> <span class="n">tarinfo</span><span class="p">:</span> <span class="kc">None</span>
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">splitext</span><span class="p">(</span><span class="n">tarinfo</span><span class="o">.</span><span class="n">name</span><span class="p">)[</span><span class="mi">1</span><span class="p">]</span>
- <span class="ow">in</span> <span class="n">exclude_files</span>
- <span class="k">else</span> <span class="n">tarinfo</span><span class="p">)</span>
- <span class="k">except</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">CalledProcessError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE:</span><span class="se">\n</span><span class="s1"> ... '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">returncode</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> ... '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... could not make installation tar ball!'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to read tar-file '</span> <span class="o">+</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">))</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="un_tarball"><a class="viewcode-back" href="../api.html#install.un_tarball">[docs]</a><span class="k">def</span> <span class="nf">un_tarball</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">):</span>
- <span class="sd">'''Extracts the given tarball into current directory.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> tarball_path : str</span>
-<span class="sd"> The complete path to the tar file which will contain all</span>
-<span class="sd"> relevant data for flex_extract.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Untar ...'</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="n">tarfile</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">)</span> <span class="k">as</span> <span class="n">tar_handle</span><span class="p">:</span>
- <span class="n">tar_handle</span><span class="o">.</span><span class="n">extractall</span><span class="p">()</span>
- <span class="k">except</span> <span class="n">tarfile</span><span class="o">.</span><span class="n">TarError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to read tar-file '</span> <span class="o">+</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to read tar-file '</span> <span class="o">+</span>
- <span class="nb">str</span><span class="p">(</span><span class="n">tarball_path</span><span class="p">))</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_env_vars"><a class="viewcode-back" href="../api.html#install.mk_env_vars">[docs]</a><span class="k">def</span> <span class="nf">mk_env_vars</span><span class="p">(</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">ecgid</span><span class="p">,</span> <span class="n">gateway</span><span class="p">,</span> <span class="n">destination</span><span class="p">):</span>
- <span class="sd">'''Creates a file named ECMWF_ENV which contains the</span>
-<span class="sd"> necessary environmental variables at ECMWF servers.</span>
-<span class="sd"> It is based on the template ECMWF_ENV.template.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ecuid : str</span>
-<span class="sd"> The user id on ECMWF server.</span>
-
-<span class="sd"> ecgid : str</span>
-<span class="sd"> The group id on ECMWF server.</span>
-
-<span class="sd"> gateway : str</span>
-<span class="sd"> The gateway server the user is using.</span>
-
-<span class="sd"> destination : str</span>
-<span class="sd"> The remote destination which is used to transfer files</span>
-<span class="sd"> from ECMWF server to local gateway server.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
- <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span> <span class="n">TemplateLoader</span>
- <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">loader</span> <span class="o">=</span> <span class="n">TemplateLoader</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span> <span class="n">auto_reload</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">ecmwfvars_template</span> <span class="o">=</span> <span class="n">loader</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_USER_ENVVARS</span><span class="p">,</span>
- <span class="bp">cls</span><span class="o">=</span><span class="n">NewTextTemplate</span><span class="p">)</span>
-
- <span class="n">stream</span> <span class="o">=</span> <span class="n">ecmwfvars_template</span><span class="o">.</span><span class="n">generate</span><span class="p">(</span><span class="n">user_name</span> <span class="o">=</span> <span class="n">ecuid</span><span class="p">,</span>
- <span class="n">user_group</span> <span class="o">=</span> <span class="n">ecgid</span><span class="p">,</span>
- <span class="n">gateway_name</span> <span class="o">=</span> <span class="n">gateway</span><span class="p">,</span>
- <span class="n">destination_name</span> <span class="o">=</span> <span class="n">destination</span>
- <span class="p">)</span>
- <span class="k">except</span> <span class="n">UndefinedError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">stream</span><span class="o">.</span><span class="n">render</span><span class="p">(</span><span class="s1">'text'</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to write '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_compilejob"><a class="viewcode-back" href="../api.html#install.mk_compilejob">[docs]</a><span class="k">def</span> <span class="nf">mk_compilejob</span><span class="p">(</span><span class="n">makefile</span><span class="p">,</span> <span class="n">target</span><span class="p">,</span> <span class="n">ecuid</span><span class="p">,</span> <span class="n">ecgid</span><span class="p">,</span> <span class="n">fp_root</span><span class="p">):</span>
- <span class="sd">'''Modifies the original job template file so that it is specified</span>
-<span class="sd"> for the user and the environment were it will be applied. Result</span>
-<span class="sd"> is stored in a new file "job.temp" in the python directory.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> makefile : str</span>
-<span class="sd"> Name of the makefile which should be used to compile FORTRAN</span>
-<span class="sd"> CONVERT2 program.</span>
-
-<span class="sd"> target : str</span>
-<span class="sd"> The target where the installation should be done, e.g. the queue.</span>
-
-<span class="sd"> ecuid : str</span>
-<span class="sd"> The user id on ECMWF server.</span>
-
-<span class="sd"> ecgid : str</span>
-<span class="sd"> The group id on ECMWF server.</span>
-
-<span class="sd"> fp_root : str</span>
-<span class="sd"> Path to the root directory of FLEXPART environment or flex_extract</span>
-<span class="sd"> environment.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
- <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span> <span class="n">TemplateLoader</span>
- <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
-
- <span class="k">if</span> <span class="n">fp_root</span> <span class="o">==</span> <span class="s1">'../'</span><span class="p">:</span>
- <span class="n">fp_root</span> <span class="o">=</span> <span class="s1">'$HOME'</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">loader</span> <span class="o">=</span> <span class="n">TemplateLoader</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span> <span class="n">auto_reload</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">compile_template</span> <span class="o">=</span> <span class="n">loader</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_COMPILEJOB</span><span class="p">,</span>
- <span class="bp">cls</span><span class="o">=</span><span class="n">NewTextTemplate</span><span class="p">)</span>
-
- <span class="n">stream</span> <span class="o">=</span> <span class="n">compile_template</span><span class="o">.</span><span class="n">generate</span><span class="p">(</span>
- <span class="n">usergroup</span> <span class="o">=</span> <span class="n">ecgid</span><span class="p">,</span>
- <span class="n">username</span> <span class="o">=</span> <span class="n">ecuid</span><span class="p">,</span>
- <span class="n">version_number</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">_VERSION_STR</span><span class="p">,</span>
- <span class="n">fp_root_scripts</span> <span class="o">=</span> <span class="n">fp_root</span><span class="p">,</span>
- <span class="n">makefile</span> <span class="o">=</span> <span class="n">makefile</span><span class="p">,</span>
- <span class="n">fortran_program</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">FORTRAN_EXECUTABLE</span>
- <span class="p">)</span>
- <span class="k">except</span> <span class="n">UndefinedError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_COMPILEJOB</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_COMPILEJOB</span><span class="p">)</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">compilejob</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_JOBSCRIPTS</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FILE_INSTALL_COMPILEJOB</span><span class="p">)</span>
-
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">compilejob</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">stream</span><span class="o">.</span><span class="n">render</span><span class="p">(</span><span class="s1">'text'</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to write '</span> <span class="o">+</span>
- <span class="n">compilejob</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_job_template"><a class="viewcode-back" href="../api.html#install.mk_job_template">[docs]</a><span class="k">def</span> <span class="nf">mk_job_template</span><span class="p">(</span><span class="n">ecuid</span><span class="p">,</span> <span class="n">ecgid</span><span class="p">,</span> <span class="n">gateway</span><span class="p">,</span> <span class="n">destination</span><span class="p">,</span> <span class="n">fp_root</span><span class="p">):</span>
- <span class="sd">'''Modifies the original job template file so that it is specified</span>
-<span class="sd"> for the user and the environment were it will be applied. Result</span>
-<span class="sd"> is stored in a new file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ecuid : str</span>
-<span class="sd"> The user id on ECMWF server.</span>
-
-<span class="sd"> ecgid : str</span>
-<span class="sd"> The group id on ECMWF server.</span>
-
-<span class="sd"> gateway : str</span>
-<span class="sd"> The gateway server the user is using.</span>
-
-<span class="sd"> destination : str</span>
-<span class="sd"> The remote destination which is used to transfer files</span>
-<span class="sd"> from ECMWF server to local gateway server.</span>
-
-<span class="sd"> fp_root : str</span>
-<span class="sd"> Path to the root directory of FLEXPART environment or flex_extract</span>
-<span class="sd"> environment.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
- <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span> <span class="n">TemplateLoader</span>
- <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
-
- <span class="n">fp_root_path_to_python</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">fp_root</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FLEXEXTRACT_DIRNAME</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">PATH_REL_PYTHON_SRC</span><span class="p">)</span>
- <span class="k">if</span> <span class="s1">'$'</span> <span class="ow">in</span> <span class="n">fp_root_path_to_python</span><span class="p">:</span>
- <span class="n">ind</span> <span class="o">=</span> <span class="n">fp_root_path_to_python</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="s1">'$'</span><span class="p">)</span>
- <span class="n">fp_root_path_to_python</span> <span class="o">=</span> <span class="n">fp_root_path_to_python</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="n">ind</span><span class="p">]</span> <span class="o">+</span> <span class="s1">'$'</span> <span class="o">+</span> \
- <span class="n">fp_root_path_to_python</span><span class="p">[</span><span class="n">ind</span><span class="p">:]</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">loader</span> <span class="o">=</span> <span class="n">TemplateLoader</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span> <span class="n">auto_reload</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">compile_template</span> <span class="o">=</span> <span class="n">loader</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_JOB</span><span class="p">,</span>
- <span class="bp">cls</span><span class="o">=</span><span class="n">NewTextTemplate</span><span class="p">)</span>
-
- <span class="n">stream</span> <span class="o">=</span> <span class="n">compile_template</span><span class="o">.</span><span class="n">generate</span><span class="p">(</span>
- <span class="n">usergroup</span> <span class="o">=</span> <span class="n">ecgid</span><span class="p">,</span>
- <span class="n">username</span> <span class="o">=</span> <span class="n">ecuid</span><span class="p">,</span>
- <span class="n">version_number</span> <span class="o">=</span> <span class="n">_config</span><span class="o">.</span><span class="n">_VERSION_STR</span><span class="p">,</span>
- <span class="n">fp_root_path</span> <span class="o">=</span> <span class="n">fp_root_path_to_python</span><span class="p">,</span>
- <span class="p">)</span>
- <span class="k">except</span> <span class="n">UndefinedError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_JOB</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate template '</span> <span class="o">+</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_INSTALL_JOB</span><span class="p">)</span>
-
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">tempjobfile</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">TEMPFILE_JOB</span><span class="p">)</span>
-
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">tempjobfile</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">stream</span><span class="o">.</span><span class="n">render</span><span class="p">(</span><span class="s1">'text'</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to write '</span> <span class="o">+</span>
- <span class="n">tempjobfile</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="del_convert_build"><a class="viewcode-back" href="../api.html#install.del_convert_build">[docs]</a><span class="k">def</span> <span class="nf">del_convert_build</span><span class="p">(</span><span class="n">src_path</span><span class="p">):</span>
- <span class="sd">'''Clean up the Fortran source directory and remove all</span>
-<span class="sd"> build files (e.g. \*.o, \*.mod and CONVERT2)</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> src_path : str</span>
-<span class="sd"> Path to the fortran source directory.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">modfiles</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="s1">'*.mod'</span><span class="p">)</span>
- <span class="n">objfiles</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="s1">'*.o'</span><span class="p">)</span>
- <span class="n">exefile</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="n">_config</span><span class="o">.</span><span class="n">FORTRAN_EXECUTABLE</span><span class="p">)</span>
-
- <span class="n">modfiles</span><span class="o">.</span><span class="n">delete_files</span><span class="p">()</span>
- <span class="n">objfiles</span><span class="o">.</span><span class="n">delete_files</span><span class="p">()</span>
- <span class="n">exefile</span><span class="o">.</span><span class="n">delete_files</span><span class="p">()</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_convert_build"><a class="viewcode-back" href="../api.html#install.mk_convert_build">[docs]</a><span class="k">def</span> <span class="nf">mk_convert_build</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="n">makefile</span><span class="p">):</span>
- <span class="sd">'''Compiles the Fortran code and generates the executable.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> src_path : str</span>
-<span class="sd"> Path to the fortran source directory.</span>
-
-<span class="sd"> makefile : str</span>
-<span class="sd"> The name of the makefile which should be used.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Using makefile: '</span> <span class="o">+</span> <span class="n">makefile</span><span class="p">)</span>
- <span class="n">p</span> <span class="o">=</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">Popen</span><span class="p">([</span><span class="s1">'make'</span><span class="p">,</span> <span class="s1">'-f'</span><span class="p">,</span>
- <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="n">makefile</span><span class="p">)],</span>
- <span class="n">stdin</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stdout</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stderr</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">bufsize</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
- <span class="n">pout</span><span class="p">,</span> <span class="n">perr</span> <span class="o">=</span> <span class="n">p</span><span class="o">.</span><span class="n">communicate</span><span class="p">()</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">pout</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">p</span><span class="o">.</span><span class="n">returncode</span> <span class="o">!=</span> <span class="mi">0</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">perr</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Please edit '</span> <span class="o">+</span> <span class="n">makefile</span> <span class="o">+</span>
- <span class="s1">' or try another Makefile in the src directory.'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Most likely GRIB_API_INCLUDE_DIR, GRIB_API_LIB '</span>
- <span class="s1">'and EMOSLIB must be adapted.'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Available Makefiles:'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">UioFiles</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span> <span class="s1">'Makefile*'</span><span class="p">))</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'Compilation failed!'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">ValueError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'ERROR: Makefile call failed:'</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="n">e</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">execute_subprocess</span><span class="p">([</span><span class="s1">'ls'</span><span class="p">,</span> <span class="s1">'-l'</span><span class="p">,</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">src_path</span><span class="p">,</span>
- <span class="n">_config</span><span class="o">.</span><span class="n">FORTRAN_EXECUTABLE</span><span class="p">)],</span> <span class="n">error_msg</span><span class="o">=</span>
- <span class="s1">'FORTRAN EXECUTABLE COULD NOT BE FOUND!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s2">"__main__"</span><span class="p">:</span>
- <span class="n">main</span><span class="p">()</span>
-</pre></div>
-
- </div>
-
- </div>
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- <p>
- © Copyright 2018, Anne Philipp and Leopold Haimberger.
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- URL_ROOT:'../',
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- LANGUAGE:'None',
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diff --git a/documentation/Sphinx/build/html/_modules/prepare_flexpart.html b/documentation/Sphinx/build/html/_modules/prepare_flexpart.html
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-
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-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
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-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
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-
- <h1>Source code for prepare_flexpart</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - using the WebAPI also for general MARS retrievals</span>
-<span class="c1"># - job submission on ecgate and cca</span>
-<span class="c1"># - job templates suitable for twice daily operational dissemination</span>
-<span class="c1"># - dividing retrievals of longer periods into digestable chunks</span>
-<span class="c1"># - retrieve also longer term forecasts, not only analyses and</span>
-<span class="c1"># short term forecast data</span>
-<span class="c1"># - conversion into GRIB2</span>
-<span class="c1"># - conversion into .fp format for faster execution of FLEXPART</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - minor changes in programming style for consistence</span>
-<span class="c1"># - BUGFIX: removed call of clean_up-Function after call of</span>
-<span class="c1"># prepareFlexpart in main since it is already called in</span>
-<span class="c1"># prepareFlexpart at the end!</span>
-<span class="c1"># - created function main and moved the two function calls for</span>
-<span class="c1"># arguments and prepare_flexpart into it</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''This script prepares the final version of the grib files which are</span>
-<span class="sd">then used by FLEXPART.</span>
-
-<span class="sd">It converts the bunch of grib files extracted via get_mars_data before,</span>
-<span class="sd">by doing the necessary conversion to get consistent grids or the</span>
-<span class="sd">disaggregation of flux data. Finally, the data fields are combined</span>
-<span class="sd">in files per available hour with the naming convention xxYYMMDDHH,</span>
-<span class="sd">where xx should be 2 arbitrary letters (mostly xx is chosen to be "EN").</span>
-
-<span class="sd">This file can also be imported as a module which then contains the following</span>
-<span class="sd">functions:</span>
-
-<span class="sd"> * main</span>
-<span class="sd"> * prepare_flexpart</span>
-
-<span class="sd">Type: prepare_flexpart.py --help</span>
-<span class="sd">to get information about command line parameters.</span>
-<span class="sd">Read the documentation for usage instructions.</span>
-<span class="sd">'''</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">datetime</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">inspect</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">socket</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="c1"># add path to local main python path for flex_extract to get full access</span>
-<span class="n">sys</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">dirname</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">abspath</span><span class="p">(</span>
- <span class="n">inspect</span><span class="o">.</span><span class="n">getfile</span><span class="p">(</span><span class="n">inspect</span><span class="o">.</span><span class="n">currentframe</span><span class="p">())))</span> <span class="o">+</span> <span class="s1">'/../'</span><span class="p">)</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">checks</span> <span class="k">import</span> <span class="n">check_ppid</span>
-<span class="kn">from</span> <span class="nn">classes.UioFiles</span> <span class="k">import</span> <span class="n">UioFiles</span>
-<span class="kn">from</span> <span class="nn">classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
-<span class="kn">from</span> <span class="nn">tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">setup_controldata</span><span class="p">,</span> <span class="n">clean_up</span><span class="p">,</span> <span class="n">get_cmdline_args</span><span class="p">,</span>
- <span class="n">read_ecenv</span><span class="p">,</span> <span class="n">make_dir</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">classes.EcFlexpart</span> <span class="k">import</span> <span class="n">EcFlexpart</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># FUNCTION</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<div class="viewcode-block" id="main"><a class="viewcode-back" href="../api.html#prepare_flexpart.main">[docs]</a><span class="k">def</span> <span class="nf">main</span><span class="p">():</span>
- <span class="sd">'''Controls the program to prepare flexpart input files from mars data.</span>
-
-<span class="sd"> This is done if it is called directly from command line.</span>
-<span class="sd"> Then it also takes program call arguments and control file input.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">c</span><span class="p">,</span> <span class="n">ppid</span><span class="p">,</span> <span class="n">_</span><span class="p">,</span> <span class="n">_</span> <span class="o">=</span> <span class="n">setup_controldata</span><span class="p">()</span>
- <span class="n">prepare_flexpart</span><span class="p">(</span><span class="n">ppid</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
- <span class="n">normal_exit</span><span class="p">(</span><span class="s1">'Preparing FLEXPART output files: Done!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="prepare_flexpart"><a class="viewcode-back" href="../api.html#prepare_flexpart.prepare_flexpart">[docs]</a><span class="k">def</span> <span class="nf">prepare_flexpart</span><span class="p">(</span><span class="n">ppid</span><span class="p">,</span> <span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Converts the mars data into flexpart ready input files.</span>
-
-<span class="sd"> Specific data fields are converted to a different grid and the flux</span>
-<span class="sd"> data are going to be disaggregated. The data fields are collected by</span>
-<span class="sd"> hour and stored in a file with a specific FLEXPART relevant naming</span>
-<span class="sd"> convention.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ppid : int</span>
-<span class="sd"> Contains the ppid number of the current ECMWF job. It will be None if</span>
-<span class="sd"> the method was called within this module.</span>
-
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="n">check_ppid</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">ppid</span><span class="p">)</span>
-
- <span class="c1"># create the start and end date</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">date</span><span class="p">(</span><span class="n">year</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">[:</span><span class="mi">4</span><span class="p">]),</span>
- <span class="n">month</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">[</span><span class="mi">4</span><span class="p">:</span><span class="mi">6</span><span class="p">]),</span>
- <span class="n">day</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">[</span><span class="mi">6</span><span class="p">:]))</span>
-
- <span class="n">end</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">date</span><span class="p">(</span><span class="n">year</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">[:</span><span class="mi">4</span><span class="p">]),</span>
- <span class="n">month</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">[</span><span class="mi">4</span><span class="p">:</span><span class="mi">6</span><span class="p">]),</span>
- <span class="n">day</span><span class="o">=</span><span class="nb">int</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">[</span><span class="mi">6</span><span class="p">:]))</span>
-
- <span class="c1"># if basetime is 00</span>
- <span class="c1"># assign starting date minus 1 day</span>
- <span class="c1"># since we need the 12 hours upfront</span>
- <span class="c1"># (the day before from 12 UTC to current day 00 UTC)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">-</span> <span class="n">datetime</span><span class="o">.</span><span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Prepare '</span> <span class="o">+</span> <span class="n">start</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span> <span class="o">+</span>
- <span class="s2">"/to/"</span> <span class="o">+</span> <span class="n">end</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">))</span>
-
- <span class="c1"># create output dir if necessary</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">exists</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">):</span>
- <span class="n">make_dir</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">)</span>
-
- <span class="c1"># get all files with flux data to be deaccumulated</span>
- <span class="n">inputfiles</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'*OG_acc_SL*.'</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ppid</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'.*'</span><span class="p">)</span>
-
- <span class="c1"># deaccumulate the flux data</span>
- <span class="n">flexpart</span> <span class="o">=</span> <span class="n">EcFlexpart</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">write_namelist</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">deacc_fluxes</span><span class="p">(</span><span class="n">inputfiles</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
-
- <span class="c1"># get a list of all other files</span>
- <span class="n">inputfiles</span> <span class="o">=</span> <span class="n">UioFiles</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s1">'????__??.*'</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">ppid</span><span class="p">)</span> <span class="o">+</span> <span class="s1">'.*'</span><span class="p">)</span>
-
- <span class="c1"># produce FLEXPART-ready GRIB files and process them -</span>
- <span class="c1"># copy/transfer/interpolate them or make them GRIB2</span>
- <span class="n">flexpart</span> <span class="o">=</span> <span class="n">EcFlexpart</span><span class="p">(</span><span class="n">c</span><span class="p">,</span> <span class="n">fluxes</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">create</span><span class="p">(</span><span class="n">inputfiles</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">stream</span><span class="o">.</span><span class="n">lower</span><span class="p">()</span> <span class="o">==</span> <span class="s1">'elda'</span><span class="p">:</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">calc_extra_elda</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">prefix</span><span class="p">)</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">process_output</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="c1"># make use of a possible conversion to a</span>
- <span class="c1"># specific flexpart binary format</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">grib2flexpart</span><span class="p">:</span>
- <span class="n">flexpart</span><span class="o">.</span><span class="n">prepare_fp_files</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="c1"># check if in debugging mode, then store all files</span>
- <span class="c1"># otherwise delete temporary files</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">debug</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">Temporary files left intact'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">clean_up</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s2">"__main__"</span><span class="p">:</span>
- <span class="n">main</span><span class="p">()</span>
-</pre></div>
-
- </div>
-
- </div>
- <footer>
-
-
- <hr/>
-
- <div role="contentinfo">
- <p>
- © Copyright 2018, Anne Philipp and Leopold Haimberger.
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- URL_ROOT:'../',
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- LANGUAGE:'None',
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-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
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- 7.1
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- <p class="caption"><span class="caption-text">Table of Contents:</span></p>
-<ul>
-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../user_guide.html">User Guide</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../api.html">Auto Generated Documentation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../support.html">Support</a></li>
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- <div itemprop="articleBody">
-
- <h1>Source code for submit</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Fouilloux (University of Oslo)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: October 2014</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna):</span>
-<span class="c1"># - job submission on ecgate and cca</span>
-<span class="c1"># - job templates suitable for twice daily operational dissemination</span>
-<span class="c1">#</span>
-<span class="c1"># February 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - minor changes in programming style (for consistence)</span>
-<span class="c1"># - changed path names to variables from config file</span>
-<span class="c1"># - added option for writing mars requests to extra file</span>
-<span class="c1"># additionally, as option without submitting the mars jobs</span>
-<span class="c1"># - splitted submit function to use genshi templates for the</span>
-<span class="c1"># job script and avoid code duplication</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''This script allows the user to extract meteorological fields from the ECMWF.</span>
-
-<span class="sd">It prepares the settings for retrieving the data from ECMWF servers and</span>
-<span class="sd">process the resulting files to prepare them for the use with FLEXPART or</span>
-<span class="sd">FLEXTRA.</span>
-
-<span class="sd">If it is supposed to work locally then it works through the necessary</span>
-<span class="sd">functions get_mars_data and prepare_flexpart. Otherwise it prepares</span>
-<span class="sd">a job script (korn shell) which will do the necessary work on the</span>
-<span class="sd">ECMWF server. This script will de submitted via the ecaccess command</span>
-<span class="sd">ecaccess-job-submit.</span>
-
-<span class="sd">This file can also be imported as a module which then contains the following</span>
-<span class="sd">functions:</span>
-
-<span class="sd"> * main - the main function of the script</span>
-<span class="sd"> * submit - calls mk_jobscript depending on operation mode and submits its</span>
-<span class="sd"> * mk_jobscript - creates the job script from a template</span>
-
-<span class="sd">Type: submit.py --help</span>
-<span class="sd">to get information about command line parameters.</span>
-<span class="sd">Read the documentation for usage instructions.</span>
-<span class="sd">'''</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">subprocess</span>
-<span class="kn">import</span> <span class="nn">inspect</span>
-<span class="kn">import</span> <span class="nn">collections</span>
-<span class="kn">from</span> <span class="nn">datetime</span> <span class="k">import</span> <span class="n">datetime</span><span class="p">,</span> <span class="n">timedelta</span>
-
-<span class="c1"># software specific classes and modules from flex_extract</span>
-<span class="kn">import</span> <span class="nn">_config</span>
-<span class="kn">from</span> <span class="nn">mods.tools</span> <span class="k">import</span> <span class="p">(</span><span class="n">setup_controldata</span><span class="p">,</span> <span class="n">normal_exit</span><span class="p">,</span> <span class="n">get_cmdline_args</span><span class="p">,</span>
- <span class="n">submit_job_to_ecserver</span><span class="p">,</span> <span class="n">read_ecenv</span><span class="p">)</span>
-<span class="kn">from</span> <span class="nn">mods.get_mars_data</span> <span class="k">import</span> <span class="n">get_mars_data</span>
-<span class="kn">from</span> <span class="nn">mods.prepare_flexpart</span> <span class="k">import</span> <span class="n">prepare_flexpart</span>
-<span class="kn">from</span> <span class="nn">classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># METHODS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-
-<div class="viewcode-block" id="main"><a class="viewcode-back" href="../api.html#submit.main">[docs]</a><span class="k">def</span> <span class="nf">main</span><span class="p">():</span>
- <span class="sd">'''Get the arguments from script call and from CONTROL file.</span>
-<span class="sd"> Decides from the argument "queue" if the local version</span>
-<span class="sd"> is done "queue=None" or the gateway version with "queue=ecgate"</span>
-<span class="sd"> or "queue=cca".</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">c</span><span class="p">,</span> <span class="n">ppid</span><span class="p">,</span> <span class="n">queue</span><span class="p">,</span> <span class="n">job_template</span> <span class="o">=</span> <span class="n">setup_controldata</span><span class="p">()</span>
-
- <span class="c1"># on local side</span>
- <span class="c1"># starting from an ECMWF server this would also be the local side</span>
- <span class="n">called_from_dir</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">getcwd</span><span class="p">()</span>
- <span class="k">if</span> <span class="n">queue</span> <span class="ow">is</span> <span class="kc">None</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">!=</span> <span class="s1">'/'</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">called_from_dir</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">!=</span> <span class="s1">'/'</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">outputdir</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">called_from_dir</span><span class="p">,</span> <span class="n">c</span><span class="o">.</span><span class="n">outputdir</span><span class="p">)</span>
- <span class="n">get_mars_data</span><span class="p">(</span><span class="n">c</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">0</span> <span class="ow">or</span> <span class="n">c</span><span class="o">.</span><span class="n">request</span> <span class="o">==</span> <span class="mi">2</span><span class="p">:</span>
- <span class="n">prepare_flexpart</span><span class="p">(</span><span class="n">ppid</span><span class="p">,</span> <span class="n">c</span><span class="p">)</span>
- <span class="n">exit_message</span> <span class="o">=</span> <span class="s1">'FLEX_EXTRACT IS DONE!'</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">exit_message</span> <span class="o">=</span> <span class="s1">'PRINTING MARS_REQUESTS DONE!'</span>
- <span class="c1"># send files to ECMWF server</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">submit</span><span class="p">(</span><span class="n">job_template</span><span class="p">,</span> <span class="n">c</span><span class="p">,</span> <span class="n">queue</span><span class="p">)</span>
- <span class="n">exit_message</span> <span class="o">=</span> <span class="s1">'FLEX_EXTRACT JOB SCRIPT IS SUBMITED!'</span>
-
- <span class="n">normal_exit</span><span class="p">(</span><span class="n">exit_message</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="submit"><a class="viewcode-back" href="../api.html#submit.submit">[docs]</a><span class="k">def</span> <span class="nf">submit</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span> <span class="n">c</span><span class="p">,</span> <span class="n">queue</span><span class="p">):</span>
- <span class="sd">'''Prepares the job script and submits it to the specified queue.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> jtemplate : str</span>
-<span class="sd"> Job template file from sub-directory "_templates" for</span>
-<span class="sd"> submission to ECMWF. It contains all necessary</span>
-<span class="sd"> module and variable settings for the ECMWF environment as well as</span>
-<span class="sd"> the job call and mail report instructions.</span>
-<span class="sd"> Default is "job.temp".</span>
-
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> queue : str</span>
-<span class="sd"> Name of queue for submission to ECMWF (e.g. ecgate or cca )</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">c</span><span class="o">.</span><span class="n">oper</span><span class="p">:</span>
- <span class="c1"># --------- create on demand job script ------------------------------------</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">purefc</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'---- Pure forecast mode! ----'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'---- On-demand mode! ----'</span><span class="p">)</span>
-
- <span class="n">job_file</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_JOBSCRIPTS</span><span class="p">,</span>
- <span class="n">jtemplate</span><span class="p">[:</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">+</span> <span class="s1">'.ksh'</span><span class="p">)</span>
-
- <span class="c1"># divide time periode into specified number of job chunks</span>
- <span class="c1"># to have multiple job scripts</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">job_chunk</span><span class="p">:</span>
- <span class="n">start</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">start_date</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">end</span> <span class="o">=</span> <span class="n">datetime</span><span class="o">.</span><span class="n">strptime</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">end_date</span><span class="p">,</span> <span class="s1">'%Y%m</span><span class="si">%d</span><span class="s1">'</span><span class="p">)</span>
- <span class="n">chunk</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="n">c</span><span class="o">.</span><span class="n">job_chunk</span><span class="p">)</span>
- <span class="n">oneday</span> <span class="o">=</span> <span class="n">timedelta</span><span class="p">(</span><span class="n">days</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">while</span> <span class="n">start</span> <span class="o"><=</span> <span class="n">end</span><span class="p">:</span>
- <span class="k">if</span> <span class="p">(</span><span class="n">start</span> <span class="o">+</span> <span class="n">chunk</span><span class="p">)</span> <span class="o"><=</span> <span class="n">end</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">=</span> <span class="p">(</span><span class="n">start</span> <span class="o">+</span> <span class="n">chunk</span> <span class="o">-</span> <span class="n">oneday</span><span class="p">)</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">=</span> <span class="n">end</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span>
-
- <span class="n">clist</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">to_list</span><span class="p">()</span>
- <span class="n">mk_jobscript</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span> <span class="n">job_file</span><span class="p">,</span> <span class="n">clist</span><span class="p">)</span>
-
- <span class="n">job_id</span> <span class="o">=</span> <span class="n">submit_job_to_ecserver</span><span class="p">(</span><span class="n">queue</span><span class="p">,</span> <span class="n">job_file</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'The job id is: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">job_id</span><span class="o">.</span><span class="n">strip</span><span class="p">()))</span>
-
- <span class="n">start</span> <span class="o">=</span> <span class="n">start</span> <span class="o">+</span> <span class="n">chunk</span>
- <span class="n">c</span><span class="o">.</span><span class="n">start_date</span> <span class="o">=</span> <span class="n">start</span><span class="o">.</span><span class="n">strftime</span><span class="p">(</span><span class="s2">"%Y%m</span><span class="si">%d</span><span class="s2">"</span><span class="p">)</span>
- <span class="c1"># submit a single job script</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="n">clist</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">to_list</span><span class="p">()</span>
-
- <span class="n">mk_jobscript</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span> <span class="n">job_file</span><span class="p">,</span> <span class="n">clist</span><span class="p">)</span>
-
- <span class="n">job_id</span> <span class="o">=</span> <span class="n">submit_job_to_ecserver</span><span class="p">(</span><span class="n">queue</span><span class="p">,</span> <span class="n">job_file</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'The job id is: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">job_id</span><span class="o">.</span><span class="n">strip</span><span class="p">()))</span>
-
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># --------- create operational job script ----------------------------------</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'---- Operational mode! ----'</span><span class="p">)</span>
-
- <span class="n">job_file</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_JOBSCRIPTS</span><span class="p">,</span>
- <span class="n">jtemplate</span><span class="p">[:</span><span class="o">-</span><span class="mi">5</span><span class="p">]</span> <span class="o">+</span> <span class="s1">'oper.ksh'</span><span class="p">)</span>
-
- <span class="n">c</span><span class="o">.</span><span class="n">start_date</span> <span class="o">=</span> <span class="s1">'$</span><span class="si">{MSJ_YEAR}</span><span class="s1">$</span><span class="si">{MSJ_MONTH}</span><span class="s1">$</span><span class="si">{MSJ_DAY}</span><span class="s1">'</span>
- <span class="n">c</span><span class="o">.</span><span class="n">end_date</span> <span class="o">=</span> <span class="s1">'$</span><span class="si">{MSJ_YEAR}</span><span class="s1">$</span><span class="si">{MSJ_MONTH}</span><span class="s1">$</span><span class="si">{MSJ_DAY}</span><span class="s1">'</span>
- <span class="n">c</span><span class="o">.</span><span class="n">basetime</span> <span class="o">=</span> <span class="s1">'$</span><span class="si">{MSJ_BASETIME}</span><span class="s1">'</span>
- <span class="k">if</span> <span class="n">c</span><span class="o">.</span><span class="n">maxstep</span> <span class="o">></span> <span class="mi">24</span><span class="p">:</span>
- <span class="n">c</span><span class="o">.</span><span class="n">time</span> <span class="o">=</span> <span class="s1">'$</span><span class="si">{MSJ_BASETIME}</span><span class="s1"> </span><span class="si">{MSJ_BASETIME}</span><span class="s1">'</span>
-
- <span class="n">clist</span> <span class="o">=</span> <span class="n">c</span><span class="o">.</span><span class="n">to_list</span><span class="p">()</span>
-
- <span class="n">mk_jobscript</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span> <span class="n">job_file</span><span class="p">,</span> <span class="n">clist</span><span class="p">)</span>
-
- <span class="n">job_id</span> <span class="o">=</span> <span class="n">submit_job_to_ecserver</span><span class="p">(</span><span class="n">queue</span><span class="p">,</span> <span class="n">job_file</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'The job id is: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">job_id</span><span class="o">.</span><span class="n">strip</span><span class="p">()))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'You should get an email per job with subject flex.hostname.pid'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="mk_jobscript"><a class="viewcode-back" href="../api.html#submit.mk_jobscript">[docs]</a><span class="k">def</span> <span class="nf">mk_jobscript</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span> <span class="n">job_file</span><span class="p">,</span> <span class="n">clist</span><span class="p">):</span>
- <span class="sd">'''Creates the job script from template.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> jtemplate : str</span>
-<span class="sd"> Job template file from sub-directory "_templates" for</span>
-<span class="sd"> submission to ECMWF. It contains all necessary</span>
-<span class="sd"> module and variable settings for the ECMWF environment as well as</span>
-<span class="sd"> the job call and mail report instructions.</span>
-<span class="sd"> Default is "job.temp".</span>
-
-<span class="sd"> job_file : str</span>
-<span class="sd"> Path to the job script file.</span>
-
-<span class="sd"> clist : list of str</span>
-<span class="sd"> Contains all necessary parameters for ECMWF CONTROL file.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">genshi.template.text</span> <span class="k">import</span> <span class="n">NewTextTemplate</span>
- <span class="kn">from</span> <span class="nn">genshi.template</span> <span class="k">import</span> <span class="n">TemplateLoader</span>
- <span class="kn">from</span> <span class="nn">genshi.template.eval</span> <span class="k">import</span> <span class="n">UndefinedError</span>
-
- <span class="c1"># load template and insert control content as list</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="n">loader</span> <span class="o">=</span> <span class="n">TemplateLoader</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_TEMPLATES</span><span class="p">,</span> <span class="n">auto_reload</span><span class="o">=</span><span class="kc">False</span><span class="p">)</span>
- <span class="n">control_template</span> <span class="o">=</span> <span class="n">loader</span><span class="o">.</span><span class="n">load</span><span class="p">(</span><span class="n">jtemplate</span><span class="p">,</span>
- <span class="bp">cls</span><span class="o">=</span><span class="n">NewTextTemplate</span><span class="p">)</span>
-
- <span class="n">stream</span> <span class="o">=</span> <span class="n">control_template</span><span class="o">.</span><span class="n">generate</span><span class="p">(</span><span class="n">control_content</span><span class="o">=</span><span class="n">clist</span><span class="p">)</span>
- <span class="k">except</span> <span class="n">UndefinedError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate jobscript'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to generate jobscript'</span><span class="p">)</span>
-
- <span class="c1"># create jobscript file</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">job_file</span><span class="p">,</span> <span class="s1">'w'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">f</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="n">stream</span><span class="o">.</span><span class="n">render</span><span class="p">(</span><span class="s1">'text'</span><span class="p">))</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... error occured while trying to write '</span> <span class="o">+</span> <span class="n">job_file</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s2">"__main__"</span><span class="p">:</span>
- <span class="n">main</span><span class="p">()</span>
-</pre></div>
-
- </div>
-
- </div>
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index ebf21f994f35e27cca241349a7e5d7e755904cbc..0000000000000000000000000000000000000000
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-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
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- 7.1
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-<ul>
-<li class="toctree-l1"><a class="reference internal" href="../downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../user_guide.html">User Guide</a></li>
-<li class="toctree-l1"><a class="reference internal" href="../api.html">Auto Generated Documentation</a></li>
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-
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- <div itemprop="articleBody">
-
- <h1>Source code for tools</h1><div class="highlight"><pre>
-<span></span><span class="ch">#!/usr/bin/env python</span>
-<span class="c1"># -*- coding: utf-8 -*-</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="c1"># @Author: Anne Philipp (University of Vienna)</span>
-<span class="c1">#</span>
-<span class="c1"># @Date: May 2018</span>
-<span class="c1">#</span>
-<span class="c1"># @Change History:</span>
-<span class="c1"># October 2014 - Anne Fouilloux (University of Oslo)</span>
-<span class="c1"># - created functions silent_remove and product (taken from ECMWF)</span>
-<span class="c1">#</span>
-<span class="c1"># November 2015 - Leopold Haimberger (University of Vienna)</span>
-<span class="c1"># - created functions: interpret_args_and_control, clean_up</span>
-<span class="c1"># my_error, normal_exit, init128, to_param_id</span>
-<span class="c1">#</span>
-<span class="c1"># April - December 2018 - Anne Philipp (University of Vienna):</span>
-<span class="c1"># - applied PEP8 style guide</span>
-<span class="c1"># - added documentation</span>
-<span class="c1"># - moved all non class methods from former file Flexparttools in here</span>
-<span class="c1"># - seperated args and control interpretation</span>
-<span class="c1"># - added functions get_list_as_string, read_ecenv, send_mail, make_dir,</span>
-<span class="c1"># put_file_to_ecserver, submit_job_to_ecserver, get_informations,</span>
-<span class="c1"># get_dimensions, execute_subprocess, none_or_int, none_or_str</span>
-<span class="c1">#</span>
-<span class="c1"># @License:</span>
-<span class="c1"># (C) Copyright 2014-2019.</span>
-<span class="c1"># Anne Philipp, Leopold Haimberger</span>
-<span class="c1">#</span>
-<span class="c1"># This work is licensed under the Creative Commons Attribution 4.0</span>
-<span class="c1"># International License. To view a copy of this license, visit</span>
-<span class="c1"># http://creativecommons.org/licenses/by/4.0/ or send a letter to</span>
-<span class="c1"># Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</span>
-<span class="c1">#</span>
-<span class="c1"># @Methods:</span>
-<span class="c1"># none_or_str</span>
-<span class="c1"># none_or_int</span>
-<span class="c1"># get_cmdline_args</span>
-<span class="c1"># read_ecenv</span>
-<span class="c1"># clean_up</span>
-<span class="c1"># my_error</span>
-<span class="c1"># send_mail</span>
-<span class="c1"># normal_exit</span>
-<span class="c1"># product</span>
-<span class="c1"># silent_remove</span>
-<span class="c1"># init128</span>
-<span class="c1"># to_param_id</span>
-<span class="c1"># get_list_as_string</span>
-<span class="c1"># make_dir</span>
-<span class="c1"># put_file_to_ecserver</span>
-<span class="c1"># submit_job_to_ecserver</span>
-<span class="c1"># get_informations</span>
-<span class="c1"># get_dimensions</span>
-<span class="c1"># execute_subprocess</span>
-<span class="c1">#*******************************************************************************</span>
-<span class="sd">'''This module contains a collection of diverse tasks within flex_extract.</span>
-<span class="sd">'''</span>
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># MODULES</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="kn">import</span> <span class="nn">os</span>
-<span class="kn">import</span> <span class="nn">errno</span>
-<span class="kn">import</span> <span class="nn">sys</span>
-<span class="kn">import</span> <span class="nn">glob</span>
-<span class="kn">import</span> <span class="nn">subprocess</span>
-<span class="kn">import</span> <span class="nn">traceback</span>
-<span class="kn">import</span> <span class="nn">exceptions</span>
-<span class="kn">from</span> <span class="nn">datetime</span> <span class="k">import</span> <span class="n">datetime</span>
-<span class="kn">from</span> <span class="nn">argparse</span> <span class="k">import</span> <span class="n">ArgumentParser</span><span class="p">,</span> <span class="n">ArgumentDefaultsHelpFormatter</span>
-
-
-
-<span class="c1"># ------------------------------------------------------------------------------</span>
-<span class="c1"># METHODS</span>
-<span class="c1"># ------------------------------------------------------------------------------</span>
-
-<div class="viewcode-block" id="setup_controldata"><a class="viewcode-back" href="../api.html#tools.setup_controldata">[docs]</a><span class="k">def</span> <span class="nf">setup_controldata</span><span class="p">():</span>
- <span class="sd">'''Collects, stores and checks controlling arguments from command line,</span>
-<span class="sd"> CONTROL file and ECMWF_ENV file.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> ppid : str</span>
-<span class="sd"> Parent process id.</span>
-
-<span class="sd"> queue : str</span>
-<span class="sd"> Name of queue for submission to ECMWF (e.g. ecgate or cca )</span>
-
-<span class="sd"> job_template : str</span>
-<span class="sd"> Name of the job template file for submission to ECMWF server.</span>
-<span class="sd"> '''</span>
- <span class="kn">import</span> <span class="nn">_config</span>
- <span class="kn">from</span> <span class="nn">classes.ControlFile</span> <span class="k">import</span> <span class="n">ControlFile</span>
-
- <span class="n">args</span> <span class="o">=</span> <span class="n">get_cmdline_args</span><span class="p">()</span>
- <span class="n">c</span> <span class="o">=</span> <span class="n">ControlFile</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">controlfile</span><span class="p">)</span>
- <span class="n">c</span><span class="o">.</span><span class="n">assign_args_to_control</span><span class="p">(</span><span class="n">args</span><span class="p">)</span>
- <span class="k">if</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">isfile</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">):</span>
- <span class="n">env_parameter</span> <span class="o">=</span> <span class="n">read_ecenv</span><span class="p">(</span><span class="n">_config</span><span class="o">.</span><span class="n">PATH_ECMWF_ENV</span><span class="p">)</span>
- <span class="n">c</span><span class="o">.</span><span class="n">assign_envs_to_control</span><span class="p">(</span><span class="n">env_parameter</span><span class="p">)</span>
- <span class="n">c</span><span class="o">.</span><span class="n">check_conditions</span><span class="p">(</span><span class="n">args</span><span class="o">.</span><span class="n">queue</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">c</span><span class="p">,</span> <span class="n">args</span><span class="o">.</span><span class="n">ppid</span><span class="p">,</span> <span class="n">args</span><span class="o">.</span><span class="n">queue</span><span class="p">,</span> <span class="n">args</span><span class="o">.</span><span class="n">job_template</span></div>
-
-<div class="viewcode-block" id="none_or_str"><a class="viewcode-back" href="../api.html#tools.none_or_str">[docs]</a><span class="k">def</span> <span class="nf">none_or_str</span><span class="p">(</span><span class="n">value</span><span class="p">):</span>
- <span class="sd">'''Converts the input string into pythons None-type if the string</span>
-<span class="sd"> contains string "None".</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> value : str</span>
-<span class="sd"> String to be checked for the "None" word.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> None or value:</span>
-<span class="sd"> Return depends on the content of the input value. If it was "None",</span>
-<span class="sd"> then the python type None is returned. Otherwise the string itself.</span>
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="n">value</span> <span class="o">==</span> <span class="s1">'None'</span><span class="p">:</span>
- <span class="k">return</span> <span class="kc">None</span>
- <span class="k">return</span> <span class="n">value</span></div>
-
-<div class="viewcode-block" id="none_or_int"><a class="viewcode-back" href="../api.html#tools.none_or_int">[docs]</a><span class="k">def</span> <span class="nf">none_or_int</span><span class="p">(</span><span class="n">value</span><span class="p">):</span>
- <span class="sd">'''Converts the input string into pythons None-type if the string</span>
-<span class="sd"> contains string "None". Otherwise it is converted to an integer value.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> value : str</span>
-<span class="sd"> String to be checked for the "None" word.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> None or int(value):</span>
-<span class="sd"> Return depends on the content of the input value. If it was "None",</span>
-<span class="sd"> then the python type None is returned. Otherwise the string is</span>
-<span class="sd"> converted into an integer value.</span>
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="n">value</span> <span class="o">==</span> <span class="s1">'None'</span><span class="p">:</span>
- <span class="k">return</span> <span class="kc">None</span>
- <span class="k">return</span> <span class="nb">int</span><span class="p">(</span><span class="n">value</span><span class="p">)</span></div>
-
-<div class="viewcode-block" id="get_cmdline_args"><a class="viewcode-back" href="../api.html#tools.get_cmdline_args">[docs]</a><span class="k">def</span> <span class="nf">get_cmdline_args</span><span class="p">():</span>
- <span class="sd">'''Decomposes the command line arguments and assigns them to variables.</span>
-<span class="sd"> Apply default values for non mentioned arguments.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> args : Namespace</span>
-<span class="sd"> Contains the commandline arguments from script/program call.</span>
-<span class="sd"> '''</span>
-
- <span class="n">parser</span> <span class="o">=</span> <span class="n">ArgumentParser</span><span class="p">(</span><span class="n">description</span><span class="o">=</span><span class="s1">'Retrieve FLEXPART input from </span><span class="se">\</span>
-<span class="s1"> ECMWF MARS archive'</span><span class="p">,</span>
- <span class="n">formatter_class</span><span class="o">=</span><span class="n">ArgumentDefaultsHelpFormatter</span><span class="p">)</span>
-
- <span class="c1"># control parameters that override control file values</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--start_date"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"start_date"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"start date YYYYMMDD"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--end_date"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"end_date"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"end_date YYYYMMDD"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--date_chunk"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"date_chunk"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"# of days to be retrieved at once"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--job_chunk"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"job_chunk"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"# of days to be retrieved within a single job"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--controlfile"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"controlfile"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="s1">'CONTROL.temp'</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"file with CONTROL parameters"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--basetime"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"basetime"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"base such as 0 or 12 (for half day retrievals)"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--step"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"step"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"steps such as 00/to/48"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--levelist"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"levelist"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"Vertical levels to be retrieved, e.g. 30/to/60"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--area"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"area"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"area defined as north/west/south/east"</span><span class="p">)</span>
-
- <span class="c1"># some switches</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--debug"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"debug"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"debug mode - leave temporary files intact"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--oper"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"oper"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"operational mode - prepares dates with </span><span class="se">\</span>
-<span class="s2"> environment variables"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--request"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"request"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"list all mars requests in file mars_requests.dat"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--public"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"public"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"public mode - retrieves the public datasets"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--rrint"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"rrint"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"select old or new precipitation interpolation </span><span class="se">\</span>
-<span class="s2"> 0 - old method</span><span class="se">\</span>
-<span class="s2"> 1 - new method (additional subgrid points)"</span><span class="p">)</span>
-
- <span class="c1"># set directories</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--inputdir"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"inputdir"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"root directory for storing intermediate files"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--outputdir"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"outputdir"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"root directory for storing output files"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--flexpartdir"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"flexpartdir"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"FLEXPART root directory (to find grib2flexpart </span><span class="se">\</span>
-<span class="s2"> and COMMAND file)</span><span class="se">\n</span><span class="s2"> Normally flex_extract resides in </span><span class="se">\</span>
-<span class="s2"> the scripts directory of the FLEXPART distribution"</span><span class="p">)</span>
-
- <span class="c1"># this is only used by prepare_flexpart.py to rerun a postprocessing step</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--ppid"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"ppid"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"specify parent process id for </span><span class="se">\</span>
-<span class="s2"> rerun of prepare_flexpart"</span><span class="p">)</span>
-
- <span class="c1"># arguments for job submission to ECMWF, only needed by submit.py</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--job_template"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s1">'job_template'</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="s2">"job.temp"</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"job template file for submission to ECMWF"</span><span class="p">)</span>
- <span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--queue"</span><span class="p">,</span> <span class="n">dest</span><span class="o">=</span><span class="s2">"queue"</span><span class="p">,</span>
- <span class="nb">type</span><span class="o">=</span><span class="n">none_or_str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="kc">None</span><span class="p">,</span>
- <span class="n">help</span><span class="o">=</span><span class="s2">"queue for submission to ECMWF </span><span class="se">\</span>
-<span class="s2"> (e.g. ecgate or cca )"</span><span class="p">)</span>
-
- <span class="n">args</span> <span class="o">=</span> <span class="n">parser</span><span class="o">.</span><span class="n">parse_args</span><span class="p">()</span>
-
- <span class="k">return</span> <span class="n">args</span></div>
-
-<div class="viewcode-block" id="read_ecenv"><a class="viewcode-back" href="../api.html#tools.read_ecenv">[docs]</a><span class="k">def</span> <span class="nf">read_ecenv</span><span class="p">(</span><span class="n">filepath</span><span class="p">):</span>
- <span class="sd">'''Reads the file into a dictionary where the key values are the parameter</span>
-<span class="sd"> names.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filepath : str</span>
-<span class="sd"> Path to file where the ECMWF environment parameters are stored.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> envs : dict</span>
-<span class="sd"> Contains the environment parameter ecuid, ecgid, gateway</span>
-<span class="sd"> and destination for ECMWF server environments.</span>
-<span class="sd"> '''</span>
- <span class="n">envs</span><span class="o">=</span> <span class="p">{}</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">filepath</span><span class="p">,</span> <span class="s1">'r'</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">line</span> <span class="ow">in</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">data</span> <span class="o">=</span> <span class="n">line</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">()</span>
- <span class="n">envs</span><span class="p">[</span><span class="nb">str</span><span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">])]</span> <span class="o">=</span> <span class="nb">str</span><span class="p">(</span><span class="n">data</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Error occured while trying to read ECMWF_ENV '</span>
- <span class="s1">'file: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">filepath</span><span class="p">))</span>
-
- <span class="k">return</span> <span class="n">envs</span></div>
-
-<div class="viewcode-block" id="clean_up"><a class="viewcode-back" href="../api.html#tools.clean_up">[docs]</a><span class="k">def</span> <span class="nf">clean_up</span><span class="p">(</span><span class="n">c</span><span class="p">):</span>
- <span class="sd">'''Remove files from the intermediate directory (inputdir).</span>
-
-<span class="sd"> It keeps the final FLEXPART input files if program runs without</span>
-<span class="sd"> ECMWF Api and keywords "ectrans" or "ecstorage" are set to "1".</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> c : ControlFile</span>
-<span class="sd"> Contains all the parameters of CONTROL file and</span>
-<span class="sd"> command line.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... clean inputdir!"</span><span class="p">)</span>
-
- <span class="n">cleanlist</span> <span class="o">=</span> <span class="p">[</span><span class="n">file</span> <span class="k">for</span> <span class="n">file</span> <span class="ow">in</span> <span class="n">glob</span><span class="o">.</span><span class="n">glob</span><span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">inputdir</span><span class="p">,</span> <span class="s2">"*"</span><span class="p">))</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">basename</span><span class="p">(</span><span class="n">file</span><span class="p">)</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="n">c</span><span class="o">.</span><span class="n">prefix</span><span class="p">)]</span>
-
- <span class="k">if</span> <span class="n">cleanlist</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">element</span> <span class="ow">in</span> <span class="n">cleanlist</span><span class="p">:</span>
- <span class="n">silent_remove</span><span class="p">(</span><span class="n">element</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... done!"</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"... nothing to clean!"</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="my_error"><a class="viewcode-back" href="../api.html#tools.my_error">[docs]</a><span class="k">def</span> <span class="nf">my_error</span><span class="p">(</span><span class="n">message</span><span class="o">=</span><span class="s1">'ERROR'</span><span class="p">):</span>
- <span class="sd">'''Prints a specified error message which can be passed to the function</span>
-<span class="sd"> before exiting the program.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> message : str, optional</span>
-<span class="sd"> Error message. Default value is "ERROR".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="n">trace</span> <span class="o">=</span> <span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">traceback</span><span class="o">.</span><span class="n">format_stack</span><span class="p">())</span>
- <span class="n">full_message</span> <span class="o">=</span> <span class="n">message</span> <span class="o">+</span> <span class="s1">'</span><span class="se">\n\n</span><span class="s1">'</span> <span class="o">+</span> <span class="n">trace</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="n">full_message</span><span class="p">)</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="mi">1</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="send_mail"><a class="viewcode-back" href="../api.html#tools.send_mail">[docs]</a><span class="k">def</span> <span class="nf">send_mail</span><span class="p">(</span><span class="n">users</span><span class="p">,</span> <span class="n">success_mode</span><span class="p">,</span> <span class="n">message</span><span class="p">):</span>
- <span class="sd">'''Prints a specific exit message which can be passed to the function.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> users : list of str</span>
-<span class="sd"> Contains all email addresses which should be notified.</span>
-<span class="sd"> It might also contain just the ecmwf user name which wil trigger</span>
-<span class="sd"> mailing to the associated email address for this user.</span>
-
-<span class="sd"> success_mode : str</span>
-<span class="sd"> States the exit mode of the program to put into</span>
-<span class="sd"> the mail subject line.</span>
-
-<span class="sd"> message : str, optional</span>
-<span class="sd"> Message for exiting program. Default value is "Done!".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">for</span> <span class="n">user</span> <span class="ow">in</span> <span class="n">users</span><span class="p">:</span>
- <span class="k">if</span> <span class="s1">'$</span><span class="si">{USER}</span><span class="s1">'</span> <span class="ow">in</span> <span class="n">user</span><span class="p">:</span>
- <span class="n">user</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">getenv</span><span class="p">(</span><span class="s1">'USER'</span><span class="p">)</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="n">p</span> <span class="o">=</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">Popen</span><span class="p">([</span><span class="s1">'mail'</span><span class="p">,</span> <span class="s1">'-s flex_extract_v7.1 '</span> <span class="o">+</span>
- <span class="n">success_mode</span><span class="p">,</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">user</span><span class="p">)],</span>
- <span class="n">stdin</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stdout</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">stderr</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">PIPE</span><span class="p">,</span>
- <span class="n">bufsize</span><span class="o">=</span><span class="mi">1</span><span class="p">)</span>
- <span class="n">pout</span> <span class="o">=</span> <span class="n">p</span><span class="o">.</span><span class="n">communicate</span><span class="p">(</span><span class="nb">input</span><span class="o">=</span><span class="n">message</span> <span class="o">+</span> <span class="s1">'</span><span class="se">\n\n</span><span class="s1">'</span><span class="p">)[</span><span class="mi">0</span><span class="p">]</span>
- <span class="k">except</span> <span class="ne">ValueError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... Email could not be sent!'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... Email could not be sent!'</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Email sent to '</span> <span class="o">+</span> <span class="n">os</span><span class="o">.</span><span class="n">path</span><span class="o">.</span><span class="n">expandvars</span><span class="p">(</span><span class="n">user</span><span class="p">))</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="normal_exit"><a class="viewcode-back" href="../api.html#tools.normal_exit">[docs]</a><span class="k">def</span> <span class="nf">normal_exit</span><span class="p">(</span><span class="n">message</span><span class="o">=</span><span class="s1">'Done!'</span><span class="p">):</span>
- <span class="sd">'''Prints a specific exit message which can be passed to the function.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> message : str, optional</span>
-<span class="sd"> Message for exiting program. Default value is "Done!".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">message</span><span class="p">))</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="product"><a class="viewcode-back" href="../api.html#tools.product">[docs]</a><span class="k">def</span> <span class="nf">product</span><span class="p">(</span><span class="o">*</span><span class="n">args</span><span class="p">,</span> <span class="o">**</span><span class="n">kwds</span><span class="p">):</span>
- <span class="sd">'''Creates combinations of all passed arguments.</span>
-
-<span class="sd"> This method combines the single characters of the passed arguments</span>
-<span class="sd"> with each other. So that each character of each argument value</span>
-<span class="sd"> will be combined with each character of the other arguments as a tuple.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> This method is taken from an example at the ECMWF wiki website.</span>
-<span class="sd"> https://software.ecmwf.int/wiki/display/GRIB/index.py; 2018-03-16</span>
-
-<span class="sd"> Example</span>
-<span class="sd"> -------</span>
-<span class="sd"> product('ABCD', 'xy') --> Ax Ay Bx By Cx Cy Dx Dy</span>
-
-<span class="sd"> product(range(2), repeat = 3) --> 000 001 010 011 100 101 110 111</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> \*args : list or str</span>
-<span class="sd"> Positional arguments (arbitrary number).</span>
-
-<span class="sd"> \*\*kwds : dict</span>
-<span class="sd"> Contains all the keyword arguments from \*args.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> prod : :obj:`tuple`</span>
-<span class="sd"> Return will be done with "yield". A tuple of combined arguments.</span>
-<span class="sd"> See example in description above.</span>
-<span class="sd"> '''</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="n">pools</span> <span class="o">=</span> <span class="nb">map</span><span class="p">(</span><span class="nb">tuple</span><span class="p">,</span> <span class="n">args</span><span class="p">)</span> <span class="o">*</span> <span class="n">kwds</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s1">'repeat'</span><span class="p">,</span> <span class="mi">1</span><span class="p">)</span>
- <span class="n">result</span> <span class="o">=</span> <span class="p">[[]]</span>
- <span class="k">for</span> <span class="n">pool</span> <span class="ow">in</span> <span class="n">pools</span><span class="p">:</span>
- <span class="n">result</span> <span class="o">=</span> <span class="p">[</span><span class="n">x</span> <span class="o">+</span> <span class="p">[</span><span class="n">y</span><span class="p">]</span> <span class="k">for</span> <span class="n">x</span> <span class="ow">in</span> <span class="n">result</span> <span class="k">for</span> <span class="n">y</span> <span class="ow">in</span> <span class="n">pool</span><span class="p">]</span>
- <span class="k">for</span> <span class="n">prod</span> <span class="ow">in</span> <span class="n">result</span><span class="p">:</span>
- <span class="k">yield</span> <span class="nb">tuple</span><span class="p">(</span><span class="n">prod</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">TypeError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... PRODUCT GENERATION FAILED!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="silent_remove"><a class="viewcode-back" href="../api.html#tools.silent_remove">[docs]</a><span class="k">def</span> <span class="nf">silent_remove</span><span class="p">(</span><span class="n">filename</span><span class="p">):</span>
- <span class="sd">'''Remove file if it exists.</span>
-<span class="sd"> The function does not fail if the file does not exist.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filename : str</span>
-<span class="sd"> The name of the file to be removed without notification.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="n">os</span><span class="o">.</span><span class="n">remove</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="c1"># errno.ENOENT = no such file or directory</span>
- <span class="k">if</span> <span class="n">e</span><span class="o">.</span><span class="n">errno</span> <span class="o">==</span> <span class="n">errno</span><span class="o">.</span><span class="n">ENOENT</span><span class="p">:</span>
- <span class="k">pass</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">raise</span> <span class="c1"># re-raise exception if a different error occured</span>
-
- <span class="k">return</span></div>
-
-
-<div class="viewcode-block" id="init128"><a class="viewcode-back" href="../api.html#tools.init128">[docs]</a><span class="k">def</span> <span class="nf">init128</span><span class="p">(</span><span class="n">filepath</span><span class="p">):</span>
- <span class="sd">'''Opens and reads the grib file with table 128 information.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filepath : str</span>
-<span class="sd"> Path to file of ECMWF grib table number 128.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> table128 : dict</span>
-<span class="sd"> Contains the ECMWF grib table 128 information.</span>
-<span class="sd"> The key is the parameter number and the value is the</span>
-<span class="sd"> short name of the parameter.</span>
-<span class="sd"> '''</span>
- <span class="n">table128</span> <span class="o">=</span> <span class="nb">dict</span><span class="p">()</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">filepath</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="n">fdata</span> <span class="o">=</span> <span class="n">f</span><span class="o">.</span><span class="n">read</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Error occured while trying to read parameter '</span>
- <span class="s1">'table file: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">filepath</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">data</span> <span class="ow">in</span> <span class="n">fdata</span><span class="p">:</span>
- <span class="k">if</span> <span class="n">data</span> <span class="o">!=</span> <span class="s1">''</span> <span class="ow">and</span> <span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">]</span> <span class="o">!=</span> <span class="s1">'!'</span><span class="p">:</span>
- <span class="n">table128</span><span class="p">[</span><span class="n">data</span><span class="p">[</span><span class="mi">0</span><span class="p">:</span><span class="mi">3</span><span class="p">]]</span> <span class="o">=</span> <span class="n">data</span><span class="p">[</span><span class="mi">59</span><span class="p">:</span><span class="mi">65</span><span class="p">]</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
-
- <span class="k">return</span> <span class="n">table128</span></div>
-
-
-<div class="viewcode-block" id="to_param_id"><a class="viewcode-back" href="../api.html#tools.to_param_id">[docs]</a><span class="k">def</span> <span class="nf">to_param_id</span><span class="p">(</span><span class="n">pars</span><span class="p">,</span> <span class="n">table</span><span class="p">):</span>
- <span class="sd">'''Transform parameter names to parameter ids with ECMWF grib table 128.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> pars : str</span>
-<span class="sd"> Addpar argument from CONTROL file in the format of</span>
-<span class="sd"> parameter names instead of ids. The parameter short</span>
-<span class="sd"> names are sepearted with "/" and they are passed as</span>
-<span class="sd"> one single string.</span>
-
-<span class="sd"> table : dict</span>
-<span class="sd"> Contains the ECMWF grib table 128 information.</span>
-<span class="sd"> The key is the parameter number and the value is the</span>
-<span class="sd"> short name of the parameter.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> ipar : list of int</span>
-<span class="sd"> List of addpar parameters from CONTROL file transformed to</span>
-<span class="sd"> parameter ids in the format of integer.</span>
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">pars</span><span class="p">:</span>
- <span class="k">return</span> <span class="p">[]</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">pars</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
- <span class="n">pars</span><span class="o">=</span><span class="nb">str</span><span class="p">(</span><span class="n">pars</span><span class="p">)</span>
-
- <span class="n">cpar</span> <span class="o">=</span> <span class="n">pars</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
- <span class="n">ipar</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">par</span> <span class="ow">in</span> <span class="n">cpar</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">table</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="k">if</span> <span class="n">par</span> <span class="o">==</span> <span class="n">k</span> <span class="ow">or</span> <span class="n">par</span> <span class="o">==</span> <span class="n">v</span><span class="p">:</span>
- <span class="n">ipar</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="nb">int</span><span class="p">(</span><span class="n">k</span><span class="p">))</span>
- <span class="k">break</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'Warning: par '</span> <span class="o">+</span> <span class="n">par</span> <span class="o">+</span> <span class="s1">' not found in table 128'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">ipar</span></div>
-
-<div class="viewcode-block" id="to_param_id_with_tablenumber"><a class="viewcode-back" href="../api.html#tools.to_param_id_with_tablenumber">[docs]</a><span class="k">def</span> <span class="nf">to_param_id_with_tablenumber</span><span class="p">(</span><span class="n">pars</span><span class="p">,</span> <span class="n">table</span><span class="p">):</span>
- <span class="sd">'''Transform parameter names to parameter ids and add table id.</span>
-
-<span class="sd"> Conversion with ECMWF grib table 128.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> pars : str</span>
-<span class="sd"> Addpar argument from CONTROL file in the format of</span>
-<span class="sd"> parameter names instead of ids. The parameter short</span>
-<span class="sd"> names are sepearted with "/" and they are passed as</span>
-<span class="sd"> one single string.</span>
-
-<span class="sd"> table : dict</span>
-<span class="sd"> Contains the ECMWF grib table 128 information.</span>
-<span class="sd"> The key is the parameter number and the value is the</span>
-<span class="sd"> short name of the parameter.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> spar : str</span>
-<span class="sd"> List of addpar parameters from CONTROL file transformed to</span>
-<span class="sd"> parameter ids in the format of integer.</span>
-<span class="sd"> '''</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="n">pars</span><span class="p">:</span>
- <span class="k">return</span> <span class="p">[]</span>
- <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">pars</span><span class="p">,</span> <span class="nb">str</span><span class="p">):</span>
- <span class="n">pars</span><span class="o">=</span><span class="nb">str</span><span class="p">(</span><span class="n">pars</span><span class="p">)</span>
-
- <span class="n">cpar</span> <span class="o">=</span> <span class="n">pars</span><span class="o">.</span><span class="n">upper</span><span class="p">()</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s1">'/'</span><span class="p">)</span>
- <span class="n">spar</span> <span class="o">=</span> <span class="p">[]</span>
- <span class="k">for</span> <span class="n">par</span> <span class="ow">in</span> <span class="n">cpar</span><span class="p">:</span>
- <span class="k">for</span> <span class="n">k</span><span class="p">,</span> <span class="n">v</span> <span class="ow">in</span> <span class="n">table</span><span class="o">.</span><span class="n">iteritems</span><span class="p">():</span>
- <span class="k">if</span> <span class="n">par</span> <span class="o">==</span> <span class="n">k</span> <span class="ow">or</span> <span class="n">par</span> <span class="o">==</span> <span class="n">v</span><span class="p">:</span>
- <span class="n">spar</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">k</span> <span class="o">+</span> <span class="s1">'.128'</span><span class="p">)</span>
- <span class="k">break</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n\n\t\t</span><span class="s1">Warning: par '</span> <span class="o">+</span> <span class="n">par</span> <span class="o">+</span> <span class="s1">' not found in table 128</span><span class="se">\n\n</span><span class="s1">'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="s1">'/'</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="n">spar</span><span class="p">)</span></div>
-
-<div class="viewcode-block" id="get_list_as_string"><a class="viewcode-back" href="../api.html#tools.get_list_as_string">[docs]</a><span class="k">def</span> <span class="nf">get_list_as_string</span><span class="p">(</span><span class="n">list_obj</span><span class="p">,</span> <span class="n">concatenate_sign</span><span class="o">=</span><span class="s1">', '</span><span class="p">):</span>
- <span class="sd">'''Converts a list of arbitrary content into a single string.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> list_obj : list of *</span>
-<span class="sd"> A list with arbitrary content.</span>
-
-<span class="sd"> concatenate_sign : str, optional</span>
-<span class="sd"> A string which is used to concatenate the single</span>
-<span class="sd"> list elements. Default value is ", ".</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> str_of_list : str</span>
-<span class="sd"> The content of the list as a single string.</span>
-<span class="sd"> '''</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="nb">isinstance</span><span class="p">(</span><span class="n">list_obj</span><span class="p">,</span> <span class="nb">list</span><span class="p">):</span>
- <span class="n">list_obj</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">list_obj</span><span class="p">)</span>
- <span class="n">str_of_list</span> <span class="o">=</span> <span class="n">concatenate_sign</span><span class="o">.</span><span class="n">join</span><span class="p">(</span><span class="nb">str</span><span class="p">(</span><span class="n">l</span><span class="p">)</span> <span class="k">for</span> <span class="n">l</span> <span class="ow">in</span> <span class="n">list_obj</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">str_of_list</span></div>
-
-<div class="viewcode-block" id="make_dir"><a class="viewcode-back" href="../api.html#tools.make_dir">[docs]</a><span class="k">def</span> <span class="nf">make_dir</span><span class="p">(</span><span class="n">directory</span><span class="p">):</span>
- <span class="sd">'''Creates a directory.</span>
-
-<span class="sd"> It gives a warning if the directory already exists and skips process.</span>
-<span class="sd"> The program stops only if there is another problem.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> directory : str</span>
-<span class="sd"> The path to directory which should be created.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
- <span class="k">try</span><span class="p">:</span>
- <span class="n">os</span><span class="o">.</span><span class="n">makedirs</span><span class="p">(</span><span class="n">directory</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="c1"># errno.EEXIST = directory already exists</span>
- <span class="k">if</span> <span class="n">e</span><span class="o">.</span><span class="n">errno</span> <span class="o">==</span> <span class="n">errno</span><span class="o">.</span><span class="n">EEXIST</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'WARNING: Directory </span><span class="si">{0}</span><span class="s1"> already exists!'</span><span class="o">.</span><span class="n">format</span><span class="p">(</span><span class="n">directory</span><span class="p">))</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="k">raise</span> <span class="c1"># re-raise exception if a different error occured</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="put_file_to_ecserver"><a class="viewcode-back" href="../api.html#tools.put_file_to_ecserver">[docs]</a><span class="k">def</span> <span class="nf">put_file_to_ecserver</span><span class="p">(</span><span class="n">ecd</span><span class="p">,</span> <span class="n">filename</span><span class="p">,</span> <span class="n">target</span><span class="p">,</span> <span class="n">ecuid</span><span class="p">,</span> <span class="n">ecgid</span><span class="p">):</span>
- <span class="sd">'''Uses the ecaccess-file-put command to send a file to the ECMWF servers.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> The return value is just for testing reasons. It does not have</span>
-<span class="sd"> to be used from the calling function since the whole error handling</span>
-<span class="sd"> is done in here.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> ecd : str</span>
-<span class="sd"> The path were the file is stored.</span>
-
-<span class="sd"> filename : str</span>
-<span class="sd"> The name of the file to send to the ECMWF server.</span>
-
-<span class="sd"> target : str</span>
-<span class="sd"> The target queue where the file should be sent to.</span>
-
-<span class="sd"> ecuid : str</span>
-<span class="sd"> The user id on ECMWF server.</span>
-
-<span class="sd"> ecgid : str</span>
-<span class="sd"> The group id on ECMWF server.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-
-<span class="sd"> '''</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">subprocess</span><span class="o">.</span><span class="n">check_output</span><span class="p">([</span><span class="s1">'ecaccess-file-put'</span><span class="p">,</span>
- <span class="n">ecd</span> <span class="o">+</span> <span class="s1">'/'</span> <span class="o">+</span> <span class="n">filename</span><span class="p">,</span>
- <span class="n">target</span> <span class="o">+</span> <span class="s1">':/home/ms/'</span> <span class="o">+</span>
- <span class="n">ecgid</span> <span class="o">+</span> <span class="s1">'/'</span> <span class="o">+</span> <span class="n">ecuid</span> <span class="o">+</span>
- <span class="s1">'/'</span> <span class="o">+</span> <span class="n">filename</span><span class="p">],</span>
- <span class="n">stderr</span><span class="o">=</span><span class="n">subprocess</span><span class="o">.</span><span class="n">STDOUT</span><span class="p">)</span>
- <span class="k">except</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">CalledProcessError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">returncode</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Do you have a valid ecaccess certification key?'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... ECACCESS-FILE-PUT FAILED!'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Most likely the ECACCESS library is not available!'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... ECACCESS-FILE-PUT FAILED!'</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-
-<div class="viewcode-block" id="submit_job_to_ecserver"><a class="viewcode-back" href="../api.html#tools.submit_job_to_ecserver">[docs]</a><span class="k">def</span> <span class="nf">submit_job_to_ecserver</span><span class="p">(</span><span class="n">target</span><span class="p">,</span> <span class="n">jobname</span><span class="p">):</span>
- <span class="sd">'''Uses ecaccess-job-submit command to submit a job to the ECMWF server.</span>
-
-<span class="sd"> Note</span>
-<span class="sd"> ----</span>
-<span class="sd"> The return value is just for testing reasons. It does not have</span>
-<span class="sd"> to be used from the calling function since the whole error handling</span>
-<span class="sd"> is done in here.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> target : str</span>
-<span class="sd"> The target where the file should be sent to, e.g. the queue.</span>
-
-<span class="sd"> jobname : str</span>
-<span class="sd"> The name of the jobfile to be submitted to the ECMWF server.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> job_id : int</span>
-<span class="sd"> The id number of the job as a reference at the ecmwf server.</span>
-<span class="sd"> '''</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">job_id</span> <span class="o">=</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">check_output</span><span class="p">([</span><span class="s1">'ecaccess-job-submit'</span><span class="p">,</span> <span class="s1">'-queueName'</span><span class="p">,</span>
- <span class="n">target</span><span class="p">,</span> <span class="n">jobname</span><span class="p">])</span>
-
- <span class="k">except</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">CalledProcessError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">returncode</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Do you have a valid ecaccess certification key?'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... ECACCESS-JOB-SUBMIT FAILED!'</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">... Most likely the ECACCESS library is not available!'</span><span class="p">)</span>
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... ECACCESS-JOB-SUBMIT FAILED!'</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">job_id</span></div>
-
-
-<div class="viewcode-block" id="get_informations"><a class="viewcode-back" href="../api.html#tools.get_informations">[docs]</a><span class="k">def</span> <span class="nf">get_informations</span><span class="p">(</span><span class="n">filename</span><span class="p">):</span>
- <span class="sd">'''Gets basic information from an example grib file.</span>
-
-<span class="sd"> These information are important for later use and the</span>
-<span class="sd"> initialization of numpy arrays for data storing.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> filename : str</span>
-<span class="sd"> Name of the file which will be opened to extract basic information.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> data : dict</span>
-<span class="sd"> Contains basic informations of the ECMWF grib files, e.g.</span>
-<span class="sd"> 'Ni', 'Nj', 'latitudeOfFirstGridPointInDegrees',</span>
-<span class="sd"> 'longitudeOfFirstGridPointInDegrees', 'latitudeOfLastGridPointInDegrees',</span>
-<span class="sd"> 'longitudeOfLastGridPointInDegrees', 'jDirectionIncrementInDegrees',</span>
-<span class="sd"> 'iDirectionIncrementInDegrees', 'missingValue'</span>
-<span class="sd"> '''</span>
- <span class="kn">from</span> <span class="nn">eccodes</span> <span class="k">import</span> <span class="n">codes_grib_new_from_file</span><span class="p">,</span> <span class="n">codes_get</span><span class="p">,</span> <span class="n">codes_release</span>
-
- <span class="n">data</span> <span class="o">=</span> <span class="p">{}</span>
-
- <span class="c1"># --- open file ---</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"Opening file for getting information data --- </span><span class="si">%s</span><span class="s2">"</span> <span class="o">%</span> <span class="n">filename</span><span class="p">)</span>
- <span class="k">with</span> <span class="nb">open</span><span class="p">(</span><span class="n">filename</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
- <span class="c1"># load first message from file</span>
- <span class="n">gid</span> <span class="o">=</span> <span class="n">codes_grib_new_from_file</span><span class="p">(</span><span class="n">f</span><span class="p">)</span>
-
- <span class="c1"># information needed from grib message</span>
- <span class="n">keys</span> <span class="o">=</span> <span class="p">[</span>
- <span class="s1">'Ni'</span><span class="p">,</span>
- <span class="s1">'Nj'</span><span class="p">,</span>
- <span class="s1">'latitudeOfFirstGridPointInDegrees'</span><span class="p">,</span>
- <span class="s1">'longitudeOfFirstGridPointInDegrees'</span><span class="p">,</span>
- <span class="s1">'latitudeOfLastGridPointInDegrees'</span><span class="p">,</span>
- <span class="s1">'longitudeOfLastGridPointInDegrees'</span><span class="p">,</span>
- <span class="s1">'jDirectionIncrementInDegrees'</span><span class="p">,</span>
- <span class="s1">'iDirectionIncrementInDegrees'</span><span class="p">,</span>
- <span class="s1">'missingValue'</span><span class="p">,</span>
- <span class="p">]</span>
-
- <span class="nb">print</span><span class="p">(</span><span class="s1">'</span><span class="se">\n</span><span class="s1">Informations are: '</span><span class="p">)</span>
- <span class="k">for</span> <span class="n">key</span> <span class="ow">in</span> <span class="n">keys</span><span class="p">:</span>
- <span class="c1"># Get the value of the key in a grib message.</span>
- <span class="n">data</span><span class="p">[</span><span class="n">key</span><span class="p">]</span> <span class="o">=</span> <span class="n">codes_get</span><span class="p">(</span><span class="n">gid</span><span class="p">,</span><span class="n">key</span><span class="p">)</span>
- <span class="nb">print</span><span class="p">(</span><span class="s2">"</span><span class="si">%s</span><span class="s2"> = </span><span class="si">%s</span><span class="s2">"</span> <span class="o">%</span> <span class="p">(</span><span class="n">key</span><span class="p">,</span><span class="n">data</span><span class="p">[</span><span class="n">key</span><span class="p">]))</span>
-
- <span class="c1"># Free the memory for the message referred as gribid.</span>
- <span class="n">codes_release</span><span class="p">(</span><span class="n">gid</span><span class="p">)</span>
-
- <span class="k">return</span> <span class="n">data</span></div>
-
-
-<div class="viewcode-block" id="get_dimensions"><a class="viewcode-back" href="../api.html#tools.get_dimensions">[docs]</a><span class="k">def</span> <span class="nf">get_dimensions</span><span class="p">(</span><span class="n">info</span><span class="p">,</span> <span class="n">purefc</span><span class="p">,</span> <span class="n">dtime</span><span class="p">,</span> <span class="n">index_vals</span><span class="p">,</span> <span class="n">start_date</span><span class="p">,</span> <span class="n">end_date</span><span class="p">):</span>
- <span class="sd">'''This function specifies the correct dimensions for x, y and t.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> info : dict</span>
-<span class="sd"> Contains basic informations of the ECMWF grib files, e.g.</span>
-<span class="sd"> 'Ni', 'Nj', 'latitudeOfFirstGridPointInDegrees',</span>
-<span class="sd"> 'longitudeOfFirstGridPointInDegrees', 'latitudeOfLastGridPointInDegrees',</span>
-<span class="sd"> 'longitudeOfLastGridPointInDegrees', 'jDirectionIncrementInDegrees',</span>
-<span class="sd"> 'iDirectionIncrementInDegrees', 'missingValue'</span>
-
-<span class="sd"> purefc : int</span>
-<span class="sd"> Switch for definition of pure forecast mode or not.</span>
-
-<span class="sd"> dtime : str</span>
-<span class="sd"> Time step in hours.</span>
-
-<span class="sd"> index_vals : list of list of str</span>
-<span class="sd"> Contains the values from the keys used for a distinct selection</span>
-<span class="sd"> of grib messages in processing the grib files.</span>
-<span class="sd"> Content looks like e.g.:</span>
-<span class="sd"> index_vals[0]: ('20171106', '20171107', '20171108') ; date</span>
-<span class="sd"> index_vals[1]: ('0', '1200', '1800', '600') ; time</span>
-<span class="sd"> index_vals[2]: ('0', '12', '3', '6', '9') ; stepRange</span>
-
-<span class="sd"> start_date : str</span>
-<span class="sd"> The start date of the retrieval job.</span>
-
-<span class="sd"> end_date : str</span>
-<span class="sd"> The end date of the retrieval job.</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> (ix, jy, it) : tuple of int</span>
-<span class="sd"> Dimension in x-direction, y-direction and in time.</span>
-<span class="sd"> '''</span>
-
- <span class="n">ix</span> <span class="o">=</span> <span class="n">info</span><span class="p">[</span><span class="s1">'Ni'</span><span class="p">]</span>
-
- <span class="n">jy</span> <span class="o">=</span> <span class="n">info</span><span class="p">[</span><span class="s1">'Nj'</span><span class="p">]</span>
-
- <span class="k">if</span> <span class="ow">not</span> <span class="n">purefc</span><span class="p">:</span>
- <span class="n">it</span> <span class="o">=</span> <span class="p">((</span><span class="n">end_date</span> <span class="o">-</span> <span class="n">start_date</span><span class="p">)</span><span class="o">.</span><span class="n">days</span> <span class="o">+</span> <span class="mi">1</span><span class="p">)</span> <span class="o">*</span> <span class="mi">24</span><span class="o">/</span><span class="nb">int</span><span class="p">(</span><span class="n">dtime</span><span class="p">)</span>
- <span class="k">else</span><span class="p">:</span>
- <span class="c1"># #no of step * #no of times * #no of days</span>
- <span class="n">it</span> <span class="o">=</span> <span class="nb">len</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="mi">2</span><span class="p">])</span> <span class="o">*</span> <span class="nb">len</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="mi">1</span><span class="p">])</span> <span class="o">*</span> <span class="nb">len</span><span class="p">(</span><span class="n">index_vals</span><span class="p">[</span><span class="mi">0</span><span class="p">])</span>
-
- <span class="k">return</span> <span class="p">(</span><span class="n">ix</span><span class="p">,</span> <span class="n">jy</span><span class="p">,</span> <span class="n">it</span><span class="p">)</span></div>
-
-
-<div class="viewcode-block" id="execute_subprocess"><a class="viewcode-back" href="../api.html#tools.execute_subprocess">[docs]</a><span class="k">def</span> <span class="nf">execute_subprocess</span><span class="p">(</span><span class="n">cmd_list</span><span class="p">,</span> <span class="n">error_msg</span><span class="o">=</span><span class="s1">'SUBPROCESS FAILED!'</span><span class="p">):</span>
- <span class="sd">'''Executes a command line instruction via a subprocess.</span>
-
-<span class="sd"> Error handling is done if an error occures.</span>
-
-<span class="sd"> Parameters</span>
-<span class="sd"> ----------</span>
-<span class="sd"> cmd_list : list of str</span>
-<span class="sd"> A list of the components for the command line execution. Each</span>
-<span class="sd"> list entry is a single part of the command which is seperated from</span>
-<span class="sd"> the rest by a blank space.</span>
-<span class="sd"> E.g. ['mv', file1, file2]</span>
-
-<span class="sd"> Return</span>
-<span class="sd"> ------</span>
-<span class="sd"> error_msg : str, optional</span>
-<span class="sd"> The possible error message if the subprocess failed.</span>
-<span class="sd"> By default it will just tell "SUBPROCESS FAILED!".</span>
-<span class="sd"> '''</span>
-
- <span class="k">try</span><span class="p">:</span>
- <span class="n">subprocess</span><span class="o">.</span><span class="n">check_call</span><span class="p">(</span><span class="n">cmd_list</span><span class="p">)</span>
- <span class="k">except</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">CalledProcessError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">returncode</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... '</span> <span class="o">+</span> <span class="n">error_msg</span><span class="p">)</span>
- <span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR CODE: '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">errno</span><span class="p">))</span>
- <span class="nb">print</span><span class="p">(</span><span class="s1">'... ERROR MESSAGE:</span><span class="se">\n</span><span class="s1"> </span><span class="se">\t</span><span class="s1"> '</span> <span class="o">+</span> <span class="nb">str</span><span class="p">(</span><span class="n">e</span><span class="o">.</span><span class="n">strerror</span><span class="p">))</span>
-
- <span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="s1">'... '</span> <span class="o">+</span> <span class="n">error_msg</span><span class="p">)</span>
-
- <span class="k">return</span></div>
-</pre></div>
-
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-
- <script type="text/javascript">
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index 6c03ff4f8d0ec6edf7d928bcc5edf3592d348482..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/API.rst.txt
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@@ -1,5 +0,0 @@
-Auto Generated Documentation
-============================
-
-.. automodule:: disaggregation
- :members:
diff --git a/documentation/Sphinx/build/html/_sources/api.rst.txt b/documentation/Sphinx/build/html/_sources/api.rst.txt
deleted file mode 100644
index 90f99f7ea7efde30cccc5a0e16445cdfc89cc5e1..0000000000000000000000000000000000000000
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+++ /dev/null
@@ -1,82 +0,0 @@
-Auto Generated Documentation
-============================
-
-.. contents::
- :local:
-
-Porgrams
---------
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-install
-*******
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-.. automodule:: install
- :members:
-
-submit
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-
-.. automodule:: submit
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--------
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deleted file mode 100644
index 6c03ff4f8d0ec6edf7d928bcc5edf3592d348482..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/code.rst.txt
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-Auto Generated Documentation
-============================
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-.. automodule:: disaggregation
- :members:
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deleted file mode 100644
index 676a1fe6eef2890f713c09cf94b9d7c241f9575c..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/downloads.rst.txt
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-Downloads
-=========
-
-Describe download options of flex_extract ....
-
- UNDER CONSTRUCTION
-
-.. toctree::
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-
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- downloads/git_repo
- downloads/history_changes
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diff --git a/documentation/Sphinx/build/html/_sources/downloads/git_repo.rst.txt b/documentation/Sphinx/build/html/_sources/downloads/git_repo.rst.txt
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--- a/documentation/Sphinx/build/html/_sources/downloads/git_repo.rst.txt
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--- a/documentation/Sphinx/build/html/_sources/downloads/history_changes.rst.txt
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-==================
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\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/downloads/tar_balls.rst.txt b/documentation/Sphinx/build/html/_sources/downloads/tar_balls.rst.txt
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--- a/documentation/Sphinx/build/html/_sources/downloads/tar_balls.rst.txt
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deleted file mode 100644
index 2d9417fe276087c78da12959e568908e02269e86..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/index.rst.txt
+++ /dev/null
@@ -1,120 +0,0 @@
-.. flex_extract documentation master file, created by
- sphinx-quickstart on Wed Oct 17 18:39:05 2018.
- You can adapt this file completely to your liking, but it should at least
- contain the root `toctree` directive.
-
-Welcome to flex_extract's user documentation!
-=============================================
-
-flex_extract is a software to retrieve meteorological fields from the European Centre for Medium-Range Weather Forecasts (ECMWF) Mars archive to server as input files for the FLEXTRA/FLEXPART Atmospheric Transport Modelling system.
-
-
-.. The scripts can be 1) executed locally using the ECMWF WebMARS interface, or 2) on the ECMWF member
-.. state gateway server or HPC facility using the ecaccess software package. As another option the scripts can 3)
-.. also be triggered using ecflow scheduling software used by ECMWF for data dissemination.
-
-All third-party software and libraries required by flex_extract are open source and free of charge.
-
-.. raw:: html
-
- <table style="width:100%;">
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/download_icon.png">
- </div>
- <h2>Downloads</h2>
- <ul>
- <li><a href="">Download Tar-ball</a></li>
- <li><a href="">Git repository</a></li>
- <li><a href="">History of Changes</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:125px;vertical-align: bottom;" src="_static/prog_icon.png">
- </div>
- <h2>Program Structure</h2>
- <ul>
- <li><a href="">Overview</a></li>
- <li><a href="">Program components</a></li>
- <li><a href="">Program flow</a></li>
- </ul>
- </td>
- </tr>
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/install_icon.png">
- </div>
- <h2>Installation</h2>
- <ul>
- <li><a href="requirements.html">Requirements</a></li>
- <li><a href="">Different operation modes</a></li>
- <li><a href="">Test the installation</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/guide_icon.png">
- </div>
- <h2>User Guide</h2>
- <ul>
- <li><a href="">How to use</a></li>
- <li><a href="">Control templates</a></li>
- </ul>
- </td>
- </tr>
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:125px;vertical-align: bottom;" src="_static/api_icon.png">
- </div>
- <h2>API Index</h2>
- <ul>
- <li><a href="">Construction</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/help_icon.png">
- </div>
- <h2>Support</h2>
- <ul>
- <li><a href="">Ticket system</a></li>
- <li><a href="">Mailing list</a></li>
- <li><a href="">Known bugs or issues</a></li>
- <li><a href="">FAQ</a></li>
- </ul>
- </td>
- </tr>
- </table>
- <p></p>
-
-.. note::
-
- ![][/documentation/Sphinx/source/_static/cc-by-40.png]
- This work is licensed under the Creative Commons Attribution 4.0
- International License. To view a copy of this license, visit
- http://creativecommons.org/licenses/by/4.0/ or send a letter to
- Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-
-.. toctree::
- :maxdepth: 3
- :caption: Table of Contents:
-
- downloads
- installation
- program_structure
- user_guide
- api
- support
-
-
-Indices and tables
-==================
-
-* :ref:`genindex`
-* :ref:`modindex`
-* :ref:`search`
-
diff --git a/documentation/Sphinx/build/html/_sources/index2.rst.txt b/documentation/Sphinx/build/html/_sources/index2.rst.txt
deleted file mode 100644
index ce16a25c0eae24b00d81cc5f1e1ef778f6fb5782..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/index2.rst.txt
+++ /dev/null
@@ -1,19 +0,0 @@
-Welcome to flex_extract's documentation! (pure rest)
-====================================================
-
- +----------------------------------------+-------------------------------------------+
- | .. figure:: _static/download_icon.png | .. figure:: _static/prog_icon.png |
- | :width: 100px | :width: 100px |
- | :align: center | :align: center |
- | | |
- | Download | Program Structure |
- | -------- | ----------------- |
- | * Tar-Ball | * Overview |
- | * Git repository | * Overview |
- +----------------------------------------+-------------------------------------------+
- | Installation | User Guide |
- | | |
- | * :ref:`installation` | |
- +----------------------------------------+-------------------------------------------+
- | API Index | Support |
- +----------------------------------------+-------------------------------------------+
diff --git a/documentation/Sphinx/build/html/_sources/installation.rst.txt b/documentation/Sphinx/build/html/_sources/installation.rst.txt
deleted file mode 100644
index f759bc9c75a0c7ec6bde0b9a54a444b9a745c157..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/installation.rst.txt
+++ /dev/null
@@ -1,15 +0,0 @@
-Installation
-============
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- installation/requirements
- installation/oper_modes
- installation/test_install
-
-
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/installation/oper_modes.rst.txt b/documentation/Sphinx/build/html/_sources/installation/oper_modes.rst.txt
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index 72e86f5a665570cf8300925f9dcffce8d1aaff96..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/installation/oper_modes.rst.txt
+++ /dev/null
@@ -1,6 +0,0 @@
-Operating modes
-===============
-
-
- UNDER CONSTRUCTION
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/installation/requirements.rst.txt b/documentation/Sphinx/build/html/_sources/installation/requirements.rst.txt
deleted file mode 100644
index c1bae21176f9c5855a165a08b99cfe1f1cb01fe2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/installation/requirements.rst.txt
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index 25430881a2b41b06f46aad93f1fa4d2157f7315d..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/installation/test_install.rst.txt
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-Installation test
-=================
-
- UNDER CONSTRUCTION
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/oper_modes.rst.txt b/documentation/Sphinx/build/html/_sources/oper_modes.rst.txt
deleted file mode 100644
index 72e86f5a665570cf8300925f9dcffce8d1aaff96..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/oper_modes.rst.txt
+++ /dev/null
@@ -1,6 +0,0 @@
-Operating modes
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-
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\ No newline at end of file
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deleted file mode 100644
index 991b373c30c6cb629680d3eb2337566a68d92746..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/program_structure.rst.txt
+++ /dev/null
@@ -1,14 +0,0 @@
-Program Structure
-=================
-
-Describe structure of flex_extract ....
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- program_structure/prog_overview
- program_structure/prog_components
- program_structure/prog_flow
diff --git a/documentation/Sphinx/build/html/_sources/program_structure/prog_components.rst.txt b/documentation/Sphinx/build/html/_sources/program_structure/prog_components.rst.txt
deleted file mode 100644
index 0c7d560623a755cc2f92eaba094ae5a1d1094f77..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/program_structure/prog_components.rst.txt
+++ /dev/null
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-Program Components
-==================
-
-
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\ No newline at end of file
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deleted file mode 100644
index 07c4d84fc68ac29fc1da73bbc41f582eb386e726..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/program_structure/prog_flow.rst.txt
+++ /dev/null
@@ -1,5 +0,0 @@
-Program Flow
-================
-
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/program_structure/prog_overview.rst.txt b/documentation/Sphinx/build/html/_sources/program_structure/prog_overview.rst.txt
deleted file mode 100644
index 15cb629d2847122e0021ca03767d8940f52a07ca..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/program_structure/prog_overview.rst.txt
+++ /dev/null
@@ -1,5 +0,0 @@
-Program Overview
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\ No newline at end of file
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deleted file mode 100644
index bccf1bf4a00443f53bbeb9067a04d656a6498bde..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/support.rst.txt
+++ /dev/null
@@ -1,16 +0,0 @@
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-
-
- UNDER CONSTRUCTION
-
-
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-
- support/ticket_system
- support/mailing_list
- support/known_bugs_issues
- support/faq
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/support/faq.rst.txt b/documentation/Sphinx/build/html/_sources/support/faq.rst.txt
deleted file mode 100644
index ccfe36a63439c496b8e05036df36d02d6e2588b7..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/support/faq.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-FAQ - Frequently asked questions
-================================
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\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/support/known_bugs_issues.rst.txt b/documentation/Sphinx/build/html/_sources/support/known_bugs_issues.rst.txt
deleted file mode 100644
index 8748ad8172249cba3055858194d6aea4497237e2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/support/known_bugs_issues.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Known Bugs and Issues
-=====================
-
- UNDER CONSTRUCTION
\ No newline at end of file
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deleted file mode 100644
index e0f50126f9bc64b38a174a1adc31200faee7d1e8..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/support/mailing_list.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Mailing Lists
-=============
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/support/ticket_system.rst.txt b/documentation/Sphinx/build/html/_sources/support/ticket_system.rst.txt
deleted file mode 100644
index 58b73a6ced4ae84106553d0a72e15dc9749e4ea7..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/support/ticket_system.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-Ticket System
-=============
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/test_install.rst.txt b/documentation/Sphinx/build/html/_sources/test_install.rst.txt
deleted file mode 100644
index 25430881a2b41b06f46aad93f1fa4d2157f7315d..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/test_install.rst.txt
+++ /dev/null
@@ -1,5 +0,0 @@
-Installation test
-=================
-
- UNDER CONSTRUCTION
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/usage.rst.txt b/documentation/Sphinx/build/html/_sources/usage.rst.txt
deleted file mode 100644
index 6b1313a33fa41763fbc3e7b13e45193b07b32b87..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/usage.rst.txt
+++ /dev/null
@@ -1,6 +0,0 @@
-Usage
-=====
-
-Describe using flex_extract ....
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/user_guide.rst.txt b/documentation/Sphinx/build/html/_sources/user_guide.rst.txt
deleted file mode 100644
index 4fe6dc0befd49df56a1969e7cc713ebcce95cdf2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/user_guide.rst.txt
+++ /dev/null
@@ -1,12 +0,0 @@
-User Guide
-==========
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- user_guide/how_to
- user_guide/control_templates
-
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/user_guide/control_templates.rst.txt b/documentation/Sphinx/build/html/_sources/user_guide/control_templates.rst.txt
deleted file mode 100644
index ccd58c5244ef8d41ffca4b974fcd9657f0d4ecfc..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/user_guide/control_templates.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-CONTROL-file templates
-======================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_sources/user_guide/how_to.rst.txt b/documentation/Sphinx/build/html/_sources/user_guide/how_to.rst.txt
deleted file mode 100644
index 7e041b4e1071ef3d540c222051a773069a02af94..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_sources/user_guide/how_to.rst.txt
+++ /dev/null
@@ -1,4 +0,0 @@
-How to use flex_extract
-=======================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_static/ajax-loader.gif b/documentation/Sphinx/build/html/_static/ajax-loader.gif
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--- a/documentation/Sphinx/build/html/_static/alabaster.css
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-@import url("basic.css");
-
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-
-body {
- font-family: Georgia, serif;
- font-size: 17px;
- background-color: #fff;
- color: #000;
- margin: 0;
- padding: 0;
-}
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- width: 940px;
- margin: 30px auto 0 auto;
-}
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diff --git a/documentation/Sphinx/build/html/_static/basic.css b/documentation/Sphinx/build/html/_static/basic.css
deleted file mode 100644
index 19ced1057aebf39d3dac6f6a5d864491231a3e33..0000000000000000000000000000000000000000
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diff --git a/documentation/Sphinx/build/html/_static/custom.css b/documentation/Sphinx/build/html/_static/custom.css
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index 2a924f1d6a8bc930c5296bdb2d5c2d3e39b04a1c..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/custom.css
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diff --git a/documentation/Sphinx/build/html/_static/doctools.js b/documentation/Sphinx/build/html/_static/doctools.js
deleted file mode 100644
index d8928926bf24bb081d91a12f7b92e1b2d8b142b6..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/doctools.js
+++ /dev/null
@@ -1,313 +0,0 @@
-/*
- * doctools.js
- * ~~~~~~~~~~~
- *
- * Sphinx JavaScript utilities for all documentation.
- *
- * :copyright: Copyright 2007-2018 by the Sphinx team, see AUTHORS.
- * :license: BSD, see LICENSE for details.
- *
- */
-
-/**
- * select a different prefix for underscore
- */
-$u = _.noConflict();
-
-/**
- * make the code below compatible with browsers without
- * an installed firebug like debugger
-if (!window.console || !console.firebug) {
- var names = ["log", "debug", "info", "warn", "error", "assert", "dir",
- "dirxml", "group", "groupEnd", "time", "timeEnd", "count", "trace",
- "profile", "profileEnd"];
- window.console = {};
- for (var i = 0; i < names.length; ++i)
- window.console[names[i]] = function() {};
-}
- */
-
-/**
- * small helper function to urldecode strings
- */
-jQuery.urldecode = function(x) {
- return decodeURIComponent(x).replace(/\+/g, ' ');
-};
-
-/**
- * small helper function to urlencode strings
- */
-jQuery.urlencode = encodeURIComponent;
-
-/**
- * This function returns the parsed url parameters of the
- * current request. Multiple values per key are supported,
- * it will always return arrays of strings for the value parts.
- */
-jQuery.getQueryParameters = function(s) {
- if (typeof s === 'undefined')
- s = document.location.search;
- var parts = s.substr(s.indexOf('?') + 1).split('&');
- var result = {};
- for (var i = 0; i < parts.length; i++) {
- var tmp = parts[i].split('=', 2);
- var key = jQuery.urldecode(tmp[0]);
- var value = jQuery.urldecode(tmp[1]);
- if (key in result)
- result[key].push(value);
- else
- result[key] = [value];
- }
- return result;
-};
-
-/**
- * highlight a given string on a jquery object by wrapping it in
- * span elements with the given class name.
- */
-jQuery.fn.highlightText = function(text, className) {
- function highlight(node, addItems) {
- if (node.nodeType === 3) {
- var val = node.nodeValue;
- var pos = val.toLowerCase().indexOf(text);
- if (pos >= 0 &&
- !jQuery(node.parentNode).hasClass(className) &&
- !jQuery(node.parentNode).hasClass("nohighlight")) {
- var span;
- var isInSVG = jQuery(node).closest("body, svg, foreignObject").is("svg");
- if (isInSVG) {
- span = document.createElementNS("http://www.w3.org/2000/svg", "tspan");
- } else {
- span = document.createElement("span");
- span.className = className;
- }
- span.appendChild(document.createTextNode(val.substr(pos, text.length)));
- node.parentNode.insertBefore(span, node.parentNode.insertBefore(
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- node.nodeValue = val.substr(0, pos);
- if (isInSVG) {
- var bbox = span.getBBox();
- var rect = document.createElementNS("http://www.w3.org/2000/svg", "rect");
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- rect.y.baseVal.value = bbox.y;
- rect.width.baseVal.value = bbox.width;
- rect.height.baseVal.value = bbox.height;
- rect.setAttribute('class', className);
- var parentOfText = node.parentNode.parentNode;
- addItems.push({
- "parent": node.parentNode,
- "target": rect});
- }
- }
- }
- else if (!jQuery(node).is("button, select, textarea")) {
- jQuery.each(node.childNodes, function() {
- highlight(this, addItems);
- });
- }
- }
- var addItems = [];
- var result = this.each(function() {
- highlight(this, addItems);
- });
- for (var i = 0; i < addItems.length; ++i) {
- jQuery(addItems[i].parent).before(addItems[i].target);
- }
- return result;
-};
-
-/*
- * backward compatibility for jQuery.browser
- * This will be supported until firefox bug is fixed.
- */
-if (!jQuery.browser) {
- jQuery.uaMatch = function(ua) {
- ua = ua.toLowerCase();
-
- var match = /(chrome)[ \/]([\w.]+)/.exec(ua) ||
- /(webkit)[ \/]([\w.]+)/.exec(ua) ||
- /(opera)(?:.*version|)[ \/]([\w.]+)/.exec(ua) ||
- /(msie) ([\w.]+)/.exec(ua) ||
- ua.indexOf("compatible") < 0 && /(mozilla)(?:.*? rv:([\w.]+)|)/.exec(ua) ||
- [];
-
- return {
- browser: match[ 1 ] || "",
- version: match[ 2 ] || "0"
- };
- };
- jQuery.browser = {};
- jQuery.browser[jQuery.uaMatch(navigator.userAgent).browser] = true;
-}
-
-/**
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- */
-var Documentation = {
-
- init : function() {
- this.fixFirefoxAnchorBug();
- this.highlightSearchWords();
- this.initIndexTable();
-
- },
-
- /**
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- */
- TRANSLATIONS : {},
- PLURAL_EXPR : function(n) { return n === 1 ? 0 : 1; },
- LOCALE : 'unknown',
-
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- gettext : function(string) {
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- if (typeof translated === 'undefined')
- return string;
- return (typeof translated === 'string') ? translated : translated[0];
- },
-
- ngettext : function(singular, plural, n) {
- var translated = Documentation.TRANSLATIONS[singular];
- if (typeof translated === 'undefined')
- return (n == 1) ? singular : plural;
- return translated[Documentation.PLURALEXPR(n)];
- },
-
- addTranslations : function(catalog) {
- for (var key in catalog.messages)
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- this.PLURAL_EXPR = new Function('n', 'return +(' + catalog.plural_expr + ')');
- this.LOCALE = catalog.locale;
- },
-
- /**
- * add context elements like header anchor links
- */
- addContextElements : function() {
- $('div[id] > :header:first').each(function() {
- $('<a class="headerlink">\u00B6</a>').
- attr('href', '#' + this.id).
- attr('title', _('Permalink to this headline')).
- appendTo(this);
- });
- $('dt[id]').each(function() {
- $('<a class="headerlink">\u00B6</a>').
- attr('href', '#' + this.id).
- attr('title', _('Permalink to this definition')).
- appendTo(this);
- });
- },
-
- /**
- * workaround a firefox stupidity
- * see: https://bugzilla.mozilla.org/show_bug.cgi?id=645075
- */
- fixFirefoxAnchorBug : function() {
- if (document.location.hash && $.browser.mozilla)
- window.setTimeout(function() {
- document.location.href += '';
- }, 10);
- },
-
- /**
- * highlight the search words provided in the url in the text
- */
- highlightSearchWords : function() {
- var params = $.getQueryParameters();
- var terms = (params.highlight) ? params.highlight[0].split(/\s+/) : [];
- if (terms.length) {
- var body = $('div.body');
- if (!body.length) {
- body = $('body');
- }
- window.setTimeout(function() {
- $.each(terms, function() {
- body.highlightText(this.toLowerCase(), 'highlighted');
- });
- }, 10);
- $('<p class="highlight-link"><a href="javascript:Documentation.' +
- 'hideSearchWords()">' + _('Hide Search Matches') + '</a></p>')
- .appendTo($('#searchbox'));
- }
- },
-
- /**
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- */
- initIndexTable : function() {
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- $('tr.cg-' + idnum).toggle();
- if (src.substr(-9) === 'minus.png')
- $(this).attr('src', src.substr(0, src.length-9) + 'plus.png');
- else
- $(this).attr('src', src.substr(0, src.length-8) + 'minus.png');
- }).css('display', '');
- if (DOCUMENTATION_OPTIONS.COLLAPSE_INDEX) {
- togglers.click();
- }
- },
-
- /**
- * helper function to hide the search marks again
- */
- hideSearchWords : function() {
- $('#searchbox .highlight-link').fadeOut(300);
- $('span.highlighted').removeClass('highlighted');
- },
-
- /**
- * make the url absolute
- */
- makeURL : function(relativeURL) {
- return DOCUMENTATION_OPTIONS.URL_ROOT + '/' + relativeURL;
- },
-
- /**
- * get the current relative url
- */
- getCurrentURL : function() {
- var path = document.location.pathname;
- var parts = path.split(/\//);
- $.each(DOCUMENTATION_OPTIONS.URL_ROOT.split(/\//), function() {
- if (this === '..')
- parts.pop();
- });
- var url = parts.join('/');
- return path.substring(url.lastIndexOf('/') + 1, path.length - 1);
- },
-
- initOnKeyListeners: function() {
- $(document).keyup(function(event) {
- var activeElementType = document.activeElement.tagName;
- // don't navigate when in search box or textarea
- if (activeElementType !== 'TEXTAREA' && activeElementType !== 'INPUT' && activeElementType !== 'SELECT') {
- switch (event.keyCode) {
- case 37: // left
- var prevHref = $('link[rel="prev"]').prop('href');
- if (prevHref) {
- window.location.href = prevHref;
- return false;
- }
- case 39: // right
- var nextHref = $('link[rel="next"]').prop('href');
- if (nextHref) {
- window.location.href = nextHref;
- return false;
- }
- }
- }
- });
- }
-};
-
-// quick alias for translations
-_ = Documentation.gettext;
-
-$(document).ready(function() {
- Documentation.init();
-});
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_static/documentation_options.js b/documentation/Sphinx/build/html/_static/documentation_options.js
deleted file mode 100644
index bb18adcea7ae591abbf28eb3b8604b704a6b24b2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/documentation_options.js
+++ /dev/null
@@ -1,9 +0,0 @@
-var DOCUMENTATION_OPTIONS = {
- URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
- VERSION: '7.1 alpha',
- LANGUAGE: 'None',
- COLLAPSE_INDEX: false,
- FILE_SUFFIX: '.html',
- HAS_SOURCE: true,
- SOURCELINK_SUFFIX: '.txt'
-};
\ No newline at end of file
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diff --git a/documentation/Sphinx/build/html/_static/jquery-3.2.1.js b/documentation/Sphinx/build/html/_static/jquery-3.2.1.js
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-/*!
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- * Copyright JS Foundation and other contributors
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- */
-( function( global, factory ) {
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- // This accentuates the need for the creation of a real `window`.
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-
-
- function DOMEval( code, doc ) {
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-
- // Build a new jQuery matched element set
- var ret = jQuery.merge( this.constructor(), elems );
-
- // Add the old object onto the stack (as a reference)
- ret.prevObject = this;
-
- // Return the newly-formed element set
- return ret;
- },
-
- // Execute a callback for every element in the matched set.
- each: function( callback ) {
- return jQuery.each( this, callback );
- },
-
- map: function( callback ) {
- return this.pushStack( jQuery.map( this, function( elem, i ) {
- return callback.call( elem, i, elem );
- } ) );
- },
-
- slice: function() {
- return this.pushStack( slice.apply( this, arguments ) );
- },
-
- first: function() {
- return this.eq( 0 );
- },
-
- last: function() {
- return this.eq( -1 );
- },
-
- eq: function( i ) {
- var len = this.length,
- j = +i + ( i < 0 ? len : 0 );
- return this.pushStack( j >= 0 && j < len ? [ this[ j ] ] : [] );
- },
-
- end: function() {
- return this.prevObject || this.constructor();
- },
-
- // For internal use only.
- // Behaves like an Array's method, not like a jQuery method.
- push: push,
- sort: arr.sort,
- splice: arr.splice
-};
-
-jQuery.extend = jQuery.fn.extend = function() {
- var options, name, src, copy, copyIsArray, clone,
- target = arguments[ 0 ] || {},
- i = 1,
- length = arguments.length,
- deep = false;
-
- // Handle a deep copy situation
- if ( typeof target === "boolean" ) {
- deep = target;
-
- // Skip the boolean and the target
- target = arguments[ i ] || {};
- i++;
- }
-
- // Handle case when target is a string or something (possible in deep copy)
- if ( typeof target !== "object" && !jQuery.isFunction( target ) ) {
- target = {};
- }
-
- // Extend jQuery itself if only one argument is passed
- if ( i === length ) {
- target = this;
- i--;
- }
-
- for ( ; i < length; i++ ) {
-
- // Only deal with non-null/undefined values
- if ( ( options = arguments[ i ] ) != null ) {
-
- // Extend the base object
- for ( name in options ) {
- src = target[ name ];
- copy = options[ name ];
-
- // Prevent never-ending loop
- if ( target === copy ) {
- continue;
- }
-
- // Recurse if we're merging plain objects or arrays
- if ( deep && copy && ( jQuery.isPlainObject( copy ) ||
- ( copyIsArray = Array.isArray( copy ) ) ) ) {
-
- if ( copyIsArray ) {
- copyIsArray = false;
- clone = src && Array.isArray( src ) ? src : [];
-
- } else {
- clone = src && jQuery.isPlainObject( src ) ? src : {};
- }
-
- // Never move original objects, clone them
- target[ name ] = jQuery.extend( deep, clone, copy );
-
- // Don't bring in undefined values
- } else if ( copy !== undefined ) {
- target[ name ] = copy;
- }
- }
- }
- }
-
- // Return the modified object
- return target;
-};
-
-jQuery.extend( {
-
- // Unique for each copy of jQuery on the page
- expando: "jQuery" + ( version + Math.random() ).replace( /\D/g, "" ),
-
- // Assume jQuery is ready without the ready module
- isReady: true,
-
- error: function( msg ) {
- throw new Error( msg );
- },
-
- noop: function() {},
-
- isFunction: function( obj ) {
- return jQuery.type( obj ) === "function";
- },
-
- isWindow: function( obj ) {
- return obj != null && obj === obj.window;
- },
-
- isNumeric: function( obj ) {
-
- // As of jQuery 3.0, isNumeric is limited to
- // strings and numbers (primitives or objects)
- // that can be coerced to finite numbers (gh-2662)
- var type = jQuery.type( obj );
- return ( type === "number" || type === "string" ) &&
-
- // parseFloat NaNs numeric-cast false positives ("")
- // ...but misinterprets leading-number strings, particularly hex literals ("0x...")
- // subtraction forces infinities to NaN
- !isNaN( obj - parseFloat( obj ) );
- },
-
- isPlainObject: function( obj ) {
- var proto, Ctor;
-
- // Detect obvious negatives
- // Use toString instead of jQuery.type to catch host objects
- if ( !obj || toString.call( obj ) !== "[object Object]" ) {
- return false;
- }
-
- proto = getProto( obj );
-
- // Objects with no prototype (e.g., `Object.create( null )`) are plain
- if ( !proto ) {
- return true;
- }
-
- // Objects with prototype are plain iff they were constructed by a global Object function
- Ctor = hasOwn.call( proto, "constructor" ) && proto.constructor;
- return typeof Ctor === "function" && fnToString.call( Ctor ) === ObjectFunctionString;
- },
-
- isEmptyObject: function( obj ) {
-
- /* eslint-disable no-unused-vars */
- // See https://github.com/eslint/eslint/issues/6125
- var name;
-
- for ( name in obj ) {
- return false;
- }
- return true;
- },
-
- type: function( obj ) {
- if ( obj == null ) {
- return obj + "";
- }
-
- // Support: Android <=2.3 only (functionish RegExp)
- return typeof obj === "object" || typeof obj === "function" ?
- class2type[ toString.call( obj ) ] || "object" :
- typeof obj;
- },
-
- // Evaluates a script in a global context
- globalEval: function( code ) {
- DOMEval( code );
- },
-
- // Convert dashed to camelCase; used by the css and data modules
- // Support: IE <=9 - 11, Edge 12 - 13
- // Microsoft forgot to hump their vendor prefix (#9572)
- camelCase: function( string ) {
- return string.replace( rmsPrefix, "ms-" ).replace( rdashAlpha, fcamelCase );
- },
-
- each: function( obj, callback ) {
- var length, i = 0;
-
- if ( isArrayLike( obj ) ) {
- length = obj.length;
- for ( ; i < length; i++ ) {
- if ( callback.call( obj[ i ], i, obj[ i ] ) === false ) {
- break;
- }
- }
- } else {
- for ( i in obj ) {
- if ( callback.call( obj[ i ], i, obj[ i ] ) === false ) {
- break;
- }
- }
- }
-
- return obj;
- },
-
- // Support: Android <=4.0 only
- trim: function( text ) {
- return text == null ?
- "" :
- ( text + "" ).replace( rtrim, "" );
- },
-
- // results is for internal usage only
- makeArray: function( arr, results ) {
- var ret = results || [];
-
- if ( arr != null ) {
- if ( isArrayLike( Object( arr ) ) ) {
- jQuery.merge( ret,
- typeof arr === "string" ?
- [ arr ] : arr
- );
- } else {
- push.call( ret, arr );
- }
- }
-
- return ret;
- },
-
- inArray: function( elem, arr, i ) {
- return arr == null ? -1 : indexOf.call( arr, elem, i );
- },
-
- // Support: Android <=4.0 only, PhantomJS 1 only
- // push.apply(_, arraylike) throws on ancient WebKit
- merge: function( first, second ) {
- var len = +second.length,
- j = 0,
- i = first.length;
-
- for ( ; j < len; j++ ) {
- first[ i++ ] = second[ j ];
- }
-
- first.length = i;
-
- return first;
- },
-
- grep: function( elems, callback, invert ) {
- var callbackInverse,
- matches = [],
- i = 0,
- length = elems.length,
- callbackExpect = !invert;
-
- // Go through the array, only saving the items
- // that pass the validator function
- for ( ; i < length; i++ ) {
- callbackInverse = !callback( elems[ i ], i );
- if ( callbackInverse !== callbackExpect ) {
- matches.push( elems[ i ] );
- }
- }
-
- return matches;
- },
-
- // arg is for internal usage only
- map: function( elems, callback, arg ) {
- var length, value,
- i = 0,
- ret = [];
-
- // Go through the array, translating each of the items to their new values
- if ( isArrayLike( elems ) ) {
- length = elems.length;
- for ( ; i < length; i++ ) {
- value = callback( elems[ i ], i, arg );
-
- if ( value != null ) {
- ret.push( value );
- }
- }
-
- // Go through every key on the object,
- } else {
- for ( i in elems ) {
- value = callback( elems[ i ], i, arg );
-
- if ( value != null ) {
- ret.push( value );
- }
- }
- }
-
- // Flatten any nested arrays
- return concat.apply( [], ret );
- },
-
- // A global GUID counter for objects
- guid: 1,
-
- // Bind a function to a context, optionally partially applying any
- // arguments.
- proxy: function( fn, context ) {
- var tmp, args, proxy;
-
- if ( typeof context === "string" ) {
- tmp = fn[ context ];
- context = fn;
- fn = tmp;
- }
-
- // Quick check to determine if target is callable, in the spec
- // this throws a TypeError, but we will just return undefined.
- if ( !jQuery.isFunction( fn ) ) {
- return undefined;
- }
-
- // Simulated bind
- args = slice.call( arguments, 2 );
- proxy = function() {
- return fn.apply( context || this, args.concat( slice.call( arguments ) ) );
- };
-
- // Set the guid of unique handler to the same of original handler, so it can be removed
- proxy.guid = fn.guid = fn.guid || jQuery.guid++;
-
- return proxy;
- },
-
- now: Date.now,
-
- // jQuery.support is not used in Core but other projects attach their
- // properties to it so it needs to exist.
- support: support
-} );
-
-if ( typeof Symbol === "function" ) {
- jQuery.fn[ Symbol.iterator ] = arr[ Symbol.iterator ];
-}
-
-// Populate the class2type map
-jQuery.each( "Boolean Number String Function Array Date RegExp Object Error Symbol".split( " " ),
-function( i, name ) {
- class2type[ "[object " + name + "]" ] = name.toLowerCase();
-} );
-
-function isArrayLike( obj ) {
-
- // Support: real iOS 8.2 only (not reproducible in simulator)
- // `in` check used to prevent JIT error (gh-2145)
- // hasOwn isn't used here due to false negatives
- // regarding Nodelist length in IE
- var length = !!obj && "length" in obj && obj.length,
- type = jQuery.type( obj );
-
- if ( type === "function" || jQuery.isWindow( obj ) ) {
- return false;
- }
-
- return type === "array" || length === 0 ||
- typeof length === "number" && length > 0 && ( length - 1 ) in obj;
-}
-var Sizzle =
-/*!
- * Sizzle CSS Selector Engine v2.3.3
- * https://sizzlejs.com/
- *
- * Copyright jQuery Foundation and other contributors
- * Released under the MIT license
- * http://jquery.org/license
- *
- * Date: 2016-08-08
- */
-(function( window ) {
-
-var i,
- support,
- Expr,
- getText,
- isXML,
- tokenize,
- compile,
- select,
- outermostContext,
- sortInput,
- hasDuplicate,
-
- // Local document vars
- setDocument,
- document,
- docElem,
- documentIsHTML,
- rbuggyQSA,
- rbuggyMatches,
- matches,
- contains,
-
- // Instance-specific data
- expando = "sizzle" + 1 * new Date(),
- preferredDoc = window.document,
- dirruns = 0,
- done = 0,
- classCache = createCache(),
- tokenCache = createCache(),
- compilerCache = createCache(),
- sortOrder = function( a, b ) {
- if ( a === b ) {
- hasDuplicate = true;
- }
- return 0;
- },
-
- // Instance methods
- hasOwn = ({}).hasOwnProperty,
- arr = [],
- pop = arr.pop,
- push_native = arr.push,
- push = arr.push,
- slice = arr.slice,
- // Use a stripped-down indexOf as it's faster than native
- // https://jsperf.com/thor-indexof-vs-for/5
- indexOf = function( list, elem ) {
- var i = 0,
- len = list.length;
- for ( ; i < len; i++ ) {
- if ( list[i] === elem ) {
- return i;
- }
- }
- return -1;
- },
-
- booleans = "checked|selected|async|autofocus|autoplay|controls|defer|disabled|hidden|ismap|loop|multiple|open|readonly|required|scoped",
-
- // Regular expressions
-
- // http://www.w3.org/TR/css3-selectors/#whitespace
- whitespace = "[\\x20\\t\\r\\n\\f]",
-
- // http://www.w3.org/TR/CSS21/syndata.html#value-def-identifier
- identifier = "(?:\\\\.|[\\w-]|[^\0-\\xa0])+",
-
- // Attribute selectors: http://www.w3.org/TR/selectors/#attribute-selectors
- attributes = "\\[" + whitespace + "*(" + identifier + ")(?:" + whitespace +
- // Operator (capture 2)
- "*([*^$|!~]?=)" + whitespace +
- // "Attribute values must be CSS identifiers [capture 5] or strings [capture 3 or capture 4]"
- "*(?:'((?:\\\\.|[^\\\\'])*)'|\"((?:\\\\.|[^\\\\\"])*)\"|(" + identifier + "))|)" + whitespace +
- "*\\]",
-
- pseudos = ":(" + identifier + ")(?:\\((" +
- // To reduce the number of selectors needing tokenize in the preFilter, prefer arguments:
- // 1. quoted (capture 3; capture 4 or capture 5)
- "('((?:\\\\.|[^\\\\'])*)'|\"((?:\\\\.|[^\\\\\"])*)\")|" +
- // 2. simple (capture 6)
- "((?:\\\\.|[^\\\\()[\\]]|" + attributes + ")*)|" +
- // 3. anything else (capture 2)
- ".*" +
- ")\\)|)",
-
- // Leading and non-escaped trailing whitespace, capturing some non-whitespace characters preceding the latter
- rwhitespace = new RegExp( whitespace + "+", "g" ),
- rtrim = new RegExp( "^" + whitespace + "+|((?:^|[^\\\\])(?:\\\\.)*)" + whitespace + "+$", "g" ),
-
- rcomma = new RegExp( "^" + whitespace + "*," + whitespace + "*" ),
- rcombinators = new RegExp( "^" + whitespace + "*([>+~]|" + whitespace + ")" + whitespace + "*" ),
-
- rattributeQuotes = new RegExp( "=" + whitespace + "*([^\\]'\"]*?)" + whitespace + "*\\]", "g" ),
-
- rpseudo = new RegExp( pseudos ),
- ridentifier = new RegExp( "^" + identifier + "$" ),
-
- matchExpr = {
- "ID": new RegExp( "^#(" + identifier + ")" ),
- "CLASS": new RegExp( "^\\.(" + identifier + ")" ),
- "TAG": new RegExp( "^(" + identifier + "|[*])" ),
- "ATTR": new RegExp( "^" + attributes ),
- "PSEUDO": new RegExp( "^" + pseudos ),
- "CHILD": new RegExp( "^:(only|first|last|nth|nth-last)-(child|of-type)(?:\\(" + whitespace +
- "*(even|odd|(([+-]|)(\\d*)n|)" + whitespace + "*(?:([+-]|)" + whitespace +
- "*(\\d+)|))" + whitespace + "*\\)|)", "i" ),
- "bool": new RegExp( "^(?:" + booleans + ")$", "i" ),
- // For use in libraries implementing .is()
- // We use this for POS matching in `select`
- "needsContext": new RegExp( "^" + whitespace + "*[>+~]|:(even|odd|eq|gt|lt|nth|first|last)(?:\\(" +
- whitespace + "*((?:-\\d)?\\d*)" + whitespace + "*\\)|)(?=[^-]|$)", "i" )
- },
-
- rinputs = /^(?:input|select|textarea|button)$/i,
- rheader = /^h\d$/i,
-
- rnative = /^[^{]+\{\s*\[native \w/,
-
- // Easily-parseable/retrievable ID or TAG or CLASS selectors
- rquickExpr = /^(?:#([\w-]+)|(\w+)|\.([\w-]+))$/,
-
- rsibling = /[+~]/,
-
- // CSS escapes
- // http://www.w3.org/TR/CSS21/syndata.html#escaped-characters
- runescape = new RegExp( "\\\\([\\da-f]{1,6}" + whitespace + "?|(" + whitespace + ")|.)", "ig" ),
- funescape = function( _, escaped, escapedWhitespace ) {
- var high = "0x" + escaped - 0x10000;
- // NaN means non-codepoint
- // Support: Firefox<24
- // Workaround erroneous numeric interpretation of +"0x"
- return high !== high || escapedWhitespace ?
- escaped :
- high < 0 ?
- // BMP codepoint
- String.fromCharCode( high + 0x10000 ) :
- // Supplemental Plane codepoint (surrogate pair)
- String.fromCharCode( high >> 10 | 0xD800, high & 0x3FF | 0xDC00 );
- },
-
- // CSS string/identifier serialization
- // https://drafts.csswg.org/cssom/#common-serializing-idioms
- rcssescape = /([\0-\x1f\x7f]|^-?\d)|^-$|[^\0-\x1f\x7f-\uFFFF\w-]/g,
- fcssescape = function( ch, asCodePoint ) {
- if ( asCodePoint ) {
-
- // U+0000 NULL becomes U+FFFD REPLACEMENT CHARACTER
- if ( ch === "\0" ) {
- return "\uFFFD";
- }
-
- // Control characters and (dependent upon position) numbers get escaped as code points
- return ch.slice( 0, -1 ) + "\\" + ch.charCodeAt( ch.length - 1 ).toString( 16 ) + " ";
- }
-
- // Other potentially-special ASCII characters get backslash-escaped
- return "\\" + ch;
- },
-
- // Used for iframes
- // See setDocument()
- // Removing the function wrapper causes a "Permission Denied"
- // error in IE
- unloadHandler = function() {
- setDocument();
- },
-
- disabledAncestor = addCombinator(
- function( elem ) {
- return elem.disabled === true && ("form" in elem || "label" in elem);
- },
- { dir: "parentNode", next: "legend" }
- );
-
-// Optimize for push.apply( _, NodeList )
-try {
- push.apply(
- (arr = slice.call( preferredDoc.childNodes )),
- preferredDoc.childNodes
- );
- // Support: Android<4.0
- // Detect silently failing push.apply
- arr[ preferredDoc.childNodes.length ].nodeType;
-} catch ( e ) {
- push = { apply: arr.length ?
-
- // Leverage slice if possible
- function( target, els ) {
- push_native.apply( target, slice.call(els) );
- } :
-
- // Support: IE<9
- // Otherwise append directly
- function( target, els ) {
- var j = target.length,
- i = 0;
- // Can't trust NodeList.length
- while ( (target[j++] = els[i++]) ) {}
- target.length = j - 1;
- }
- };
-}
-
-function Sizzle( selector, context, results, seed ) {
- var m, i, elem, nid, match, groups, newSelector,
- newContext = context && context.ownerDocument,
-
- // nodeType defaults to 9, since context defaults to document
- nodeType = context ? context.nodeType : 9;
-
- results = results || [];
-
- // Return early from calls with invalid selector or context
- if ( typeof selector !== "string" || !selector ||
- nodeType !== 1 && nodeType !== 9 && nodeType !== 11 ) {
-
- return results;
- }
-
- // Try to shortcut find operations (as opposed to filters) in HTML documents
- if ( !seed ) {
-
- if ( ( context ? context.ownerDocument || context : preferredDoc ) !== document ) {
- setDocument( context );
- }
- context = context || document;
-
- if ( documentIsHTML ) {
-
- // If the selector is sufficiently simple, try using a "get*By*" DOM method
- // (excepting DocumentFragment context, where the methods don't exist)
- if ( nodeType !== 11 && (match = rquickExpr.exec( selector )) ) {
-
- // ID selector
- if ( (m = match[1]) ) {
-
- // Document context
- if ( nodeType === 9 ) {
- if ( (elem = context.getElementById( m )) ) {
-
- // Support: IE, Opera, Webkit
- // TODO: identify versions
- // getElementById can match elements by name instead of ID
- if ( elem.id === m ) {
- results.push( elem );
- return results;
- }
- } else {
- return results;
- }
-
- // Element context
- } else {
-
- // Support: IE, Opera, Webkit
- // TODO: identify versions
- // getElementById can match elements by name instead of ID
- if ( newContext && (elem = newContext.getElementById( m )) &&
- contains( context, elem ) &&
- elem.id === m ) {
-
- results.push( elem );
- return results;
- }
- }
-
- // Type selector
- } else if ( match[2] ) {
- push.apply( results, context.getElementsByTagName( selector ) );
- return results;
-
- // Class selector
- } else if ( (m = match[3]) && support.getElementsByClassName &&
- context.getElementsByClassName ) {
-
- push.apply( results, context.getElementsByClassName( m ) );
- return results;
- }
- }
-
- // Take advantage of querySelectorAll
- if ( support.qsa &&
- !compilerCache[ selector + " " ] &&
- (!rbuggyQSA || !rbuggyQSA.test( selector )) ) {
-
- if ( nodeType !== 1 ) {
- newContext = context;
- newSelector = selector;
-
- // qSA looks outside Element context, which is not what we want
- // Thanks to Andrew Dupont for this workaround technique
- // Support: IE <=8
- // Exclude object elements
- } else if ( context.nodeName.toLowerCase() !== "object" ) {
-
- // Capture the context ID, setting it first if necessary
- if ( (nid = context.getAttribute( "id" )) ) {
- nid = nid.replace( rcssescape, fcssescape );
- } else {
- context.setAttribute( "id", (nid = expando) );
- }
-
- // Prefix every selector in the list
- groups = tokenize( selector );
- i = groups.length;
- while ( i-- ) {
- groups[i] = "#" + nid + " " + toSelector( groups[i] );
- }
- newSelector = groups.join( "," );
-
- // Expand context for sibling selectors
- newContext = rsibling.test( selector ) && testContext( context.parentNode ) ||
- context;
- }
-
- if ( newSelector ) {
- try {
- push.apply( results,
- newContext.querySelectorAll( newSelector )
- );
- return results;
- } catch ( qsaError ) {
- } finally {
- if ( nid === expando ) {
- context.removeAttribute( "id" );
- }
- }
- }
- }
- }
- }
-
- // All others
- return select( selector.replace( rtrim, "$1" ), context, results, seed );
-}
-
-/**
- * Create key-value caches of limited size
- * @returns {function(string, object)} Returns the Object data after storing it on itself with
- * property name the (space-suffixed) string and (if the cache is larger than Expr.cacheLength)
- * deleting the oldest entry
- */
-function createCache() {
- var keys = [];
-
- function cache( key, value ) {
- // Use (key + " ") to avoid collision with native prototype properties (see Issue #157)
- if ( keys.push( key + " " ) > Expr.cacheLength ) {
- // Only keep the most recent entries
- delete cache[ keys.shift() ];
- }
- return (cache[ key + " " ] = value);
- }
- return cache;
-}
-
-/**
- * Mark a function for special use by Sizzle
- * @param {Function} fn The function to mark
- */
-function markFunction( fn ) {
- fn[ expando ] = true;
- return fn;
-}
-
-/**
- * Support testing using an element
- * @param {Function} fn Passed the created element and returns a boolean result
- */
-function assert( fn ) {
- var el = document.createElement("fieldset");
-
- try {
- return !!fn( el );
- } catch (e) {
- return false;
- } finally {
- // Remove from its parent by default
- if ( el.parentNode ) {
- el.parentNode.removeChild( el );
- }
- // release memory in IE
- el = null;
- }
-}
-
-/**
- * Adds the same handler for all of the specified attrs
- * @param {String} attrs Pipe-separated list of attributes
- * @param {Function} handler The method that will be applied
- */
-function addHandle( attrs, handler ) {
- var arr = attrs.split("|"),
- i = arr.length;
-
- while ( i-- ) {
- Expr.attrHandle[ arr[i] ] = handler;
- }
-}
-
-/**
- * Checks document order of two siblings
- * @param {Element} a
- * @param {Element} b
- * @returns {Number} Returns less than 0 if a precedes b, greater than 0 if a follows b
- */
-function siblingCheck( a, b ) {
- var cur = b && a,
- diff = cur && a.nodeType === 1 && b.nodeType === 1 &&
- a.sourceIndex - b.sourceIndex;
-
- // Use IE sourceIndex if available on both nodes
- if ( diff ) {
- return diff;
- }
-
- // Check if b follows a
- if ( cur ) {
- while ( (cur = cur.nextSibling) ) {
- if ( cur === b ) {
- return -1;
- }
- }
- }
-
- return a ? 1 : -1;
-}
-
-/**
- * Returns a function to use in pseudos for input types
- * @param {String} type
- */
-function createInputPseudo( type ) {
- return function( elem ) {
- var name = elem.nodeName.toLowerCase();
- return name === "input" && elem.type === type;
- };
-}
-
-/**
- * Returns a function to use in pseudos for buttons
- * @param {String} type
- */
-function createButtonPseudo( type ) {
- return function( elem ) {
- var name = elem.nodeName.toLowerCase();
- return (name === "input" || name === "button") && elem.type === type;
- };
-}
-
-/**
- * Returns a function to use in pseudos for :enabled/:disabled
- * @param {Boolean} disabled true for :disabled; false for :enabled
- */
-function createDisabledPseudo( disabled ) {
-
- // Known :disabled false positives: fieldset[disabled] > legend:nth-of-type(n+2) :can-disable
- return function( elem ) {
-
- // Only certain elements can match :enabled or :disabled
- // https://html.spec.whatwg.org/multipage/scripting.html#selector-enabled
- // https://html.spec.whatwg.org/multipage/scripting.html#selector-disabled
- if ( "form" in elem ) {
-
- // Check for inherited disabledness on relevant non-disabled elements:
- // * listed form-associated elements in a disabled fieldset
- // https://html.spec.whatwg.org/multipage/forms.html#category-listed
- // https://html.spec.whatwg.org/multipage/forms.html#concept-fe-disabled
- // * option elements in a disabled optgroup
- // https://html.spec.whatwg.org/multipage/forms.html#concept-option-disabled
- // All such elements have a "form" property.
- if ( elem.parentNode && elem.disabled === false ) {
-
- // Option elements defer to a parent optgroup if present
- if ( "label" in elem ) {
- if ( "label" in elem.parentNode ) {
- return elem.parentNode.disabled === disabled;
- } else {
- return elem.disabled === disabled;
- }
- }
-
- // Support: IE 6 - 11
- // Use the isDisabled shortcut property to check for disabled fieldset ancestors
- return elem.isDisabled === disabled ||
-
- // Where there is no isDisabled, check manually
- /* jshint -W018 */
- elem.isDisabled !== !disabled &&
- disabledAncestor( elem ) === disabled;
- }
-
- return elem.disabled === disabled;
-
- // Try to winnow out elements that can't be disabled before trusting the disabled property.
- // Some victims get caught in our net (label, legend, menu, track), but it shouldn't
- // even exist on them, let alone have a boolean value.
- } else if ( "label" in elem ) {
- return elem.disabled === disabled;
- }
-
- // Remaining elements are neither :enabled nor :disabled
- return false;
- };
-}
-
-/**
- * Returns a function to use in pseudos for positionals
- * @param {Function} fn
- */
-function createPositionalPseudo( fn ) {
- return markFunction(function( argument ) {
- argument = +argument;
- return markFunction(function( seed, matches ) {
- var j,
- matchIndexes = fn( [], seed.length, argument ),
- i = matchIndexes.length;
-
- // Match elements found at the specified indexes
- while ( i-- ) {
- if ( seed[ (j = matchIndexes[i]) ] ) {
- seed[j] = !(matches[j] = seed[j]);
- }
- }
- });
- });
-}
-
-/**
- * Checks a node for validity as a Sizzle context
- * @param {Element|Object=} context
- * @returns {Element|Object|Boolean} The input node if acceptable, otherwise a falsy value
- */
-function testContext( context ) {
- return context && typeof context.getElementsByTagName !== "undefined" && context;
-}
-
-// Expose support vars for convenience
-support = Sizzle.support = {};
-
-/**
- * Detects XML nodes
- * @param {Element|Object} elem An element or a document
- * @returns {Boolean} True iff elem is a non-HTML XML node
- */
-isXML = Sizzle.isXML = function( elem ) {
- // documentElement is verified for cases where it doesn't yet exist
- // (such as loading iframes in IE - #4833)
- var documentElement = elem && (elem.ownerDocument || elem).documentElement;
- return documentElement ? documentElement.nodeName !== "HTML" : false;
-};
-
-/**
- * Sets document-related variables once based on the current document
- * @param {Element|Object} [doc] An element or document object to use to set the document
- * @returns {Object} Returns the current document
- */
-setDocument = Sizzle.setDocument = function( node ) {
- var hasCompare, subWindow,
- doc = node ? node.ownerDocument || node : preferredDoc;
-
- // Return early if doc is invalid or already selected
- if ( doc === document || doc.nodeType !== 9 || !doc.documentElement ) {
- return document;
- }
-
- // Update global variables
- document = doc;
- docElem = document.documentElement;
- documentIsHTML = !isXML( document );
-
- // Support: IE 9-11, Edge
- // Accessing iframe documents after unload throws "permission denied" errors (jQuery #13936)
- if ( preferredDoc !== document &&
- (subWindow = document.defaultView) && subWindow.top !== subWindow ) {
-
- // Support: IE 11, Edge
- if ( subWindow.addEventListener ) {
- subWindow.addEventListener( "unload", unloadHandler, false );
-
- // Support: IE 9 - 10 only
- } else if ( subWindow.attachEvent ) {
- subWindow.attachEvent( "onunload", unloadHandler );
- }
- }
-
- /* Attributes
- ---------------------------------------------------------------------- */
-
- // Support: IE<8
- // Verify that getAttribute really returns attributes and not properties
- // (excepting IE8 booleans)
- support.attributes = assert(function( el ) {
- el.className = "i";
- return !el.getAttribute("className");
- });
-
- /* getElement(s)By*
- ---------------------------------------------------------------------- */
-
- // Check if getElementsByTagName("*") returns only elements
- support.getElementsByTagName = assert(function( el ) {
- el.appendChild( document.createComment("") );
- return !el.getElementsByTagName("*").length;
- });
-
- // Support: IE<9
- support.getElementsByClassName = rnative.test( document.getElementsByClassName );
-
- // Support: IE<10
- // Check if getElementById returns elements by name
- // The broken getElementById methods don't pick up programmatically-set names,
- // so use a roundabout getElementsByName test
- support.getById = assert(function( el ) {
- docElem.appendChild( el ).id = expando;
- return !document.getElementsByName || !document.getElementsByName( expando ).length;
- });
-
- // ID filter and find
- if ( support.getById ) {
- Expr.filter["ID"] = function( id ) {
- var attrId = id.replace( runescape, funescape );
- return function( elem ) {
- return elem.getAttribute("id") === attrId;
- };
- };
- Expr.find["ID"] = function( id, context ) {
- if ( typeof context.getElementById !== "undefined" && documentIsHTML ) {
- var elem = context.getElementById( id );
- return elem ? [ elem ] : [];
- }
- };
- } else {
- Expr.filter["ID"] = function( id ) {
- var attrId = id.replace( runescape, funescape );
- return function( elem ) {
- var node = typeof elem.getAttributeNode !== "undefined" &&
- elem.getAttributeNode("id");
- return node && node.value === attrId;
- };
- };
-
- // Support: IE 6 - 7 only
- // getElementById is not reliable as a find shortcut
- Expr.find["ID"] = function( id, context ) {
- if ( typeof context.getElementById !== "undefined" && documentIsHTML ) {
- var node, i, elems,
- elem = context.getElementById( id );
-
- if ( elem ) {
-
- // Verify the id attribute
- node = elem.getAttributeNode("id");
- if ( node && node.value === id ) {
- return [ elem ];
- }
-
- // Fall back on getElementsByName
- elems = context.getElementsByName( id );
- i = 0;
- while ( (elem = elems[i++]) ) {
- node = elem.getAttributeNode("id");
- if ( node && node.value === id ) {
- return [ elem ];
- }
- }
- }
-
- return [];
- }
- };
- }
-
- // Tag
- Expr.find["TAG"] = support.getElementsByTagName ?
- function( tag, context ) {
- if ( typeof context.getElementsByTagName !== "undefined" ) {
- return context.getElementsByTagName( tag );
-
- // DocumentFragment nodes don't have gEBTN
- } else if ( support.qsa ) {
- return context.querySelectorAll( tag );
- }
- } :
-
- function( tag, context ) {
- var elem,
- tmp = [],
- i = 0,
- // By happy coincidence, a (broken) gEBTN appears on DocumentFragment nodes too
- results = context.getElementsByTagName( tag );
-
- // Filter out possible comments
- if ( tag === "*" ) {
- while ( (elem = results[i++]) ) {
- if ( elem.nodeType === 1 ) {
- tmp.push( elem );
- }
- }
-
- return tmp;
- }
- return results;
- };
-
- // Class
- Expr.find["CLASS"] = support.getElementsByClassName && function( className, context ) {
- if ( typeof context.getElementsByClassName !== "undefined" && documentIsHTML ) {
- return context.getElementsByClassName( className );
- }
- };
-
- /* QSA/matchesSelector
- ---------------------------------------------------------------------- */
-
- // QSA and matchesSelector support
-
- // matchesSelector(:active) reports false when true (IE9/Opera 11.5)
- rbuggyMatches = [];
-
- // qSa(:focus) reports false when true (Chrome 21)
- // We allow this because of a bug in IE8/9 that throws an error
- // whenever `document.activeElement` is accessed on an iframe
- // So, we allow :focus to pass through QSA all the time to avoid the IE error
- // See https://bugs.jquery.com/ticket/13378
- rbuggyQSA = [];
-
- if ( (support.qsa = rnative.test( document.querySelectorAll )) ) {
- // Build QSA regex
- // Regex strategy adopted from Diego Perini
- assert(function( el ) {
- // Select is set to empty string on purpose
- // This is to test IE's treatment of not explicitly
- // setting a boolean content attribute,
- // since its presence should be enough
- // https://bugs.jquery.com/ticket/12359
- docElem.appendChild( el ).innerHTML = "<a id='" + expando + "'></a>" +
- "<select id='" + expando + "-\r\\' msallowcapture=''>" +
- "<option selected=''></option></select>";
-
- // Support: IE8, Opera 11-12.16
- // Nothing should be selected when empty strings follow ^= or $= or *=
- // The test attribute must be unknown in Opera but "safe" for WinRT
- // https://msdn.microsoft.com/en-us/library/ie/hh465388.aspx#attribute_section
- if ( el.querySelectorAll("[msallowcapture^='']").length ) {
- rbuggyQSA.push( "[*^$]=" + whitespace + "*(?:''|\"\")" );
- }
-
- // Support: IE8
- // Boolean attributes and "value" are not treated correctly
- if ( !el.querySelectorAll("[selected]").length ) {
- rbuggyQSA.push( "\\[" + whitespace + "*(?:value|" + booleans + ")" );
- }
-
- // Support: Chrome<29, Android<4.4, Safari<7.0+, iOS<7.0+, PhantomJS<1.9.8+
- if ( !el.querySelectorAll( "[id~=" + expando + "-]" ).length ) {
- rbuggyQSA.push("~=");
- }
-
- // Webkit/Opera - :checked should return selected option elements
- // http://www.w3.org/TR/2011/REC-css3-selectors-20110929/#checked
- // IE8 throws error here and will not see later tests
- if ( !el.querySelectorAll(":checked").length ) {
- rbuggyQSA.push(":checked");
- }
-
- // Support: Safari 8+, iOS 8+
- // https://bugs.webkit.org/show_bug.cgi?id=136851
- // In-page `selector#id sibling-combinator selector` fails
- if ( !el.querySelectorAll( "a#" + expando + "+*" ).length ) {
- rbuggyQSA.push(".#.+[+~]");
- }
- });
-
- assert(function( el ) {
- el.innerHTML = "<a href='' disabled='disabled'></a>" +
- "<select disabled='disabled'><option/></select>";
-
- // Support: Windows 8 Native Apps
- // The type and name attributes are restricted during .innerHTML assignment
- var input = document.createElement("input");
- input.setAttribute( "type", "hidden" );
- el.appendChild( input ).setAttribute( "name", "D" );
-
- // Support: IE8
- // Enforce case-sensitivity of name attribute
- if ( el.querySelectorAll("[name=d]").length ) {
- rbuggyQSA.push( "name" + whitespace + "*[*^$|!~]?=" );
- }
-
- // FF 3.5 - :enabled/:disabled and hidden elements (hidden elements are still enabled)
- // IE8 throws error here and will not see later tests
- if ( el.querySelectorAll(":enabled").length !== 2 ) {
- rbuggyQSA.push( ":enabled", ":disabled" );
- }
-
- // Support: IE9-11+
- // IE's :disabled selector does not pick up the children of disabled fieldsets
- docElem.appendChild( el ).disabled = true;
- if ( el.querySelectorAll(":disabled").length !== 2 ) {
- rbuggyQSA.push( ":enabled", ":disabled" );
- }
-
- // Opera 10-11 does not throw on post-comma invalid pseudos
- el.querySelectorAll("*,:x");
- rbuggyQSA.push(",.*:");
- });
- }
-
- if ( (support.matchesSelector = rnative.test( (matches = docElem.matches ||
- docElem.webkitMatchesSelector ||
- docElem.mozMatchesSelector ||
- docElem.oMatchesSelector ||
- docElem.msMatchesSelector) )) ) {
-
- assert(function( el ) {
- // Check to see if it's possible to do matchesSelector
- // on a disconnected node (IE 9)
- support.disconnectedMatch = matches.call( el, "*" );
-
- // This should fail with an exception
- // Gecko does not error, returns false instead
- matches.call( el, "[s!='']:x" );
- rbuggyMatches.push( "!=", pseudos );
- });
- }
-
- rbuggyQSA = rbuggyQSA.length && new RegExp( rbuggyQSA.join("|") );
- rbuggyMatches = rbuggyMatches.length && new RegExp( rbuggyMatches.join("|") );
-
- /* Contains
- ---------------------------------------------------------------------- */
- hasCompare = rnative.test( docElem.compareDocumentPosition );
-
- // Element contains another
- // Purposefully self-exclusive
- // As in, an element does not contain itself
- contains = hasCompare || rnative.test( docElem.contains ) ?
- function( a, b ) {
- var adown = a.nodeType === 9 ? a.documentElement : a,
- bup = b && b.parentNode;
- return a === bup || !!( bup && bup.nodeType === 1 && (
- adown.contains ?
- adown.contains( bup ) :
- a.compareDocumentPosition && a.compareDocumentPosition( bup ) & 16
- ));
- } :
- function( a, b ) {
- if ( b ) {
- while ( (b = b.parentNode) ) {
- if ( b === a ) {
- return true;
- }
- }
- }
- return false;
- };
-
- /* Sorting
- ---------------------------------------------------------------------- */
-
- // Document order sorting
- sortOrder = hasCompare ?
- function( a, b ) {
-
- // Flag for duplicate removal
- if ( a === b ) {
- hasDuplicate = true;
- return 0;
- }
-
- // Sort on method existence if only one input has compareDocumentPosition
- var compare = !a.compareDocumentPosition - !b.compareDocumentPosition;
- if ( compare ) {
- return compare;
- }
-
- // Calculate position if both inputs belong to the same document
- compare = ( a.ownerDocument || a ) === ( b.ownerDocument || b ) ?
- a.compareDocumentPosition( b ) :
-
- // Otherwise we know they are disconnected
- 1;
-
- // Disconnected nodes
- if ( compare & 1 ||
- (!support.sortDetached && b.compareDocumentPosition( a ) === compare) ) {
-
- // Choose the first element that is related to our preferred document
- if ( a === document || a.ownerDocument === preferredDoc && contains(preferredDoc, a) ) {
- return -1;
- }
- if ( b === document || b.ownerDocument === preferredDoc && contains(preferredDoc, b) ) {
- return 1;
- }
-
- // Maintain original order
- return sortInput ?
- ( indexOf( sortInput, a ) - indexOf( sortInput, b ) ) :
- 0;
- }
-
- return compare & 4 ? -1 : 1;
- } :
- function( a, b ) {
- // Exit early if the nodes are identical
- if ( a === b ) {
- hasDuplicate = true;
- return 0;
- }
-
- var cur,
- i = 0,
- aup = a.parentNode,
- bup = b.parentNode,
- ap = [ a ],
- bp = [ b ];
-
- // Parentless nodes are either documents or disconnected
- if ( !aup || !bup ) {
- return a === document ? -1 :
- b === document ? 1 :
- aup ? -1 :
- bup ? 1 :
- sortInput ?
- ( indexOf( sortInput, a ) - indexOf( sortInput, b ) ) :
- 0;
-
- // If the nodes are siblings, we can do a quick check
- } else if ( aup === bup ) {
- return siblingCheck( a, b );
- }
-
- // Otherwise we need full lists of their ancestors for comparison
- cur = a;
- while ( (cur = cur.parentNode) ) {
- ap.unshift( cur );
- }
- cur = b;
- while ( (cur = cur.parentNode) ) {
- bp.unshift( cur );
- }
-
- // Walk down the tree looking for a discrepancy
- while ( ap[i] === bp[i] ) {
- i++;
- }
-
- return i ?
- // Do a sibling check if the nodes have a common ancestor
- siblingCheck( ap[i], bp[i] ) :
-
- // Otherwise nodes in our document sort first
- ap[i] === preferredDoc ? -1 :
- bp[i] === preferredDoc ? 1 :
- 0;
- };
-
- return document;
-};
-
-Sizzle.matches = function( expr, elements ) {
- return Sizzle( expr, null, null, elements );
-};
-
-Sizzle.matchesSelector = function( elem, expr ) {
- // Set document vars if needed
- if ( ( elem.ownerDocument || elem ) !== document ) {
- setDocument( elem );
- }
-
- // Make sure that attribute selectors are quoted
- expr = expr.replace( rattributeQuotes, "='$1']" );
-
- if ( support.matchesSelector && documentIsHTML &&
- !compilerCache[ expr + " " ] &&
- ( !rbuggyMatches || !rbuggyMatches.test( expr ) ) &&
- ( !rbuggyQSA || !rbuggyQSA.test( expr ) ) ) {
-
- try {
- var ret = matches.call( elem, expr );
-
- // IE 9's matchesSelector returns false on disconnected nodes
- if ( ret || support.disconnectedMatch ||
- // As well, disconnected nodes are said to be in a document
- // fragment in IE 9
- elem.document && elem.document.nodeType !== 11 ) {
- return ret;
- }
- } catch (e) {}
- }
-
- return Sizzle( expr, document, null, [ elem ] ).length > 0;
-};
-
-Sizzle.contains = function( context, elem ) {
- // Set document vars if needed
- if ( ( context.ownerDocument || context ) !== document ) {
- setDocument( context );
- }
- return contains( context, elem );
-};
-
-Sizzle.attr = function( elem, name ) {
- // Set document vars if needed
- if ( ( elem.ownerDocument || elem ) !== document ) {
- setDocument( elem );
- }
-
- var fn = Expr.attrHandle[ name.toLowerCase() ],
- // Don't get fooled by Object.prototype properties (jQuery #13807)
- val = fn && hasOwn.call( Expr.attrHandle, name.toLowerCase() ) ?
- fn( elem, name, !documentIsHTML ) :
- undefined;
-
- return val !== undefined ?
- val :
- support.attributes || !documentIsHTML ?
- elem.getAttribute( name ) :
- (val = elem.getAttributeNode(name)) && val.specified ?
- val.value :
- null;
-};
-
-Sizzle.escape = function( sel ) {
- return (sel + "").replace( rcssescape, fcssescape );
-};
-
-Sizzle.error = function( msg ) {
- throw new Error( "Syntax error, unrecognized expression: " + msg );
-};
-
-/**
- * Document sorting and removing duplicates
- * @param {ArrayLike} results
- */
-Sizzle.uniqueSort = function( results ) {
- var elem,
- duplicates = [],
- j = 0,
- i = 0;
-
- // Unless we *know* we can detect duplicates, assume their presence
- hasDuplicate = !support.detectDuplicates;
- sortInput = !support.sortStable && results.slice( 0 );
- results.sort( sortOrder );
-
- if ( hasDuplicate ) {
- while ( (elem = results[i++]) ) {
- if ( elem === results[ i ] ) {
- j = duplicates.push( i );
- }
- }
- while ( j-- ) {
- results.splice( duplicates[ j ], 1 );
- }
- }
-
- // Clear input after sorting to release objects
- // See https://github.com/jquery/sizzle/pull/225
- sortInput = null;
-
- return results;
-};
-
-/**
- * Utility function for retrieving the text value of an array of DOM nodes
- * @param {Array|Element} elem
- */
-getText = Sizzle.getText = function( elem ) {
- var node,
- ret = "",
- i = 0,
- nodeType = elem.nodeType;
-
- if ( !nodeType ) {
- // If no nodeType, this is expected to be an array
- while ( (node = elem[i++]) ) {
- // Do not traverse comment nodes
- ret += getText( node );
- }
- } else if ( nodeType === 1 || nodeType === 9 || nodeType === 11 ) {
- // Use textContent for elements
- // innerText usage removed for consistency of new lines (jQuery #11153)
- if ( typeof elem.textContent === "string" ) {
- return elem.textContent;
- } else {
- // Traverse its children
- for ( elem = elem.firstChild; elem; elem = elem.nextSibling ) {
- ret += getText( elem );
- }
- }
- } else if ( nodeType === 3 || nodeType === 4 ) {
- return elem.nodeValue;
- }
- // Do not include comment or processing instruction nodes
-
- return ret;
-};
-
-Expr = Sizzle.selectors = {
-
- // Can be adjusted by the user
- cacheLength: 50,
-
- createPseudo: markFunction,
-
- match: matchExpr,
-
- attrHandle: {},
-
- find: {},
-
- relative: {
- ">": { dir: "parentNode", first: true },
- " ": { dir: "parentNode" },
- "+": { dir: "previousSibling", first: true },
- "~": { dir: "previousSibling" }
- },
-
- preFilter: {
- "ATTR": function( match ) {
- match[1] = match[1].replace( runescape, funescape );
-
- // Move the given value to match[3] whether quoted or unquoted
- match[3] = ( match[3] || match[4] || match[5] || "" ).replace( runescape, funescape );
-
- if ( match[2] === "~=" ) {
- match[3] = " " + match[3] + " ";
- }
-
- return match.slice( 0, 4 );
- },
-
- "CHILD": function( match ) {
- /* matches from matchExpr["CHILD"]
- 1 type (only|nth|...)
- 2 what (child|of-type)
- 3 argument (even|odd|\d*|\d*n([+-]\d+)?|...)
- 4 xn-component of xn+y argument ([+-]?\d*n|)
- 5 sign of xn-component
- 6 x of xn-component
- 7 sign of y-component
- 8 y of y-component
- */
- match[1] = match[1].toLowerCase();
-
- if ( match[1].slice( 0, 3 ) === "nth" ) {
- // nth-* requires argument
- if ( !match[3] ) {
- Sizzle.error( match[0] );
- }
-
- // numeric x and y parameters for Expr.filter.CHILD
- // remember that false/true cast respectively to 0/1
- match[4] = +( match[4] ? match[5] + (match[6] || 1) : 2 * ( match[3] === "even" || match[3] === "odd" ) );
- match[5] = +( ( match[7] + match[8] ) || match[3] === "odd" );
-
- // other types prohibit arguments
- } else if ( match[3] ) {
- Sizzle.error( match[0] );
- }
-
- return match;
- },
-
- "PSEUDO": function( match ) {
- var excess,
- unquoted = !match[6] && match[2];
-
- if ( matchExpr["CHILD"].test( match[0] ) ) {
- return null;
- }
-
- // Accept quoted arguments as-is
- if ( match[3] ) {
- match[2] = match[4] || match[5] || "";
-
- // Strip excess characters from unquoted arguments
- } else if ( unquoted && rpseudo.test( unquoted ) &&
- // Get excess from tokenize (recursively)
- (excess = tokenize( unquoted, true )) &&
- // advance to the next closing parenthesis
- (excess = unquoted.indexOf( ")", unquoted.length - excess ) - unquoted.length) ) {
-
- // excess is a negative index
- match[0] = match[0].slice( 0, excess );
- match[2] = unquoted.slice( 0, excess );
- }
-
- // Return only captures needed by the pseudo filter method (type and argument)
- return match.slice( 0, 3 );
- }
- },
-
- filter: {
-
- "TAG": function( nodeNameSelector ) {
- var nodeName = nodeNameSelector.replace( runescape, funescape ).toLowerCase();
- return nodeNameSelector === "*" ?
- function() { return true; } :
- function( elem ) {
- return elem.nodeName && elem.nodeName.toLowerCase() === nodeName;
- };
- },
-
- "CLASS": function( className ) {
- var pattern = classCache[ className + " " ];
-
- return pattern ||
- (pattern = new RegExp( "(^|" + whitespace + ")" + className + "(" + whitespace + "|$)" )) &&
- classCache( className, function( elem ) {
- return pattern.test( typeof elem.className === "string" && elem.className || typeof elem.getAttribute !== "undefined" && elem.getAttribute("class") || "" );
- });
- },
-
- "ATTR": function( name, operator, check ) {
- return function( elem ) {
- var result = Sizzle.attr( elem, name );
-
- if ( result == null ) {
- return operator === "!=";
- }
- if ( !operator ) {
- return true;
- }
-
- result += "";
-
- return operator === "=" ? result === check :
- operator === "!=" ? result !== check :
- operator === "^=" ? check && result.indexOf( check ) === 0 :
- operator === "*=" ? check && result.indexOf( check ) > -1 :
- operator === "$=" ? check && result.slice( -check.length ) === check :
- operator === "~=" ? ( " " + result.replace( rwhitespace, " " ) + " " ).indexOf( check ) > -1 :
- operator === "|=" ? result === check || result.slice( 0, check.length + 1 ) === check + "-" :
- false;
- };
- },
-
- "CHILD": function( type, what, argument, first, last ) {
- var simple = type.slice( 0, 3 ) !== "nth",
- forward = type.slice( -4 ) !== "last",
- ofType = what === "of-type";
-
- return first === 1 && last === 0 ?
-
- // Shortcut for :nth-*(n)
- function( elem ) {
- return !!elem.parentNode;
- } :
-
- function( elem, context, xml ) {
- var cache, uniqueCache, outerCache, node, nodeIndex, start,
- dir = simple !== forward ? "nextSibling" : "previousSibling",
- parent = elem.parentNode,
- name = ofType && elem.nodeName.toLowerCase(),
- useCache = !xml && !ofType,
- diff = false;
-
- if ( parent ) {
-
- // :(first|last|only)-(child|of-type)
- if ( simple ) {
- while ( dir ) {
- node = elem;
- while ( (node = node[ dir ]) ) {
- if ( ofType ?
- node.nodeName.toLowerCase() === name :
- node.nodeType === 1 ) {
-
- return false;
- }
- }
- // Reverse direction for :only-* (if we haven't yet done so)
- start = dir = type === "only" && !start && "nextSibling";
- }
- return true;
- }
-
- start = [ forward ? parent.firstChild : parent.lastChild ];
-
- // non-xml :nth-child(...) stores cache data on `parent`
- if ( forward && useCache ) {
-
- // Seek `elem` from a previously-cached index
-
- // ...in a gzip-friendly way
- node = parent;
- outerCache = node[ expando ] || (node[ expando ] = {});
-
- // Support: IE <9 only
- // Defend against cloned attroperties (jQuery gh-1709)
- uniqueCache = outerCache[ node.uniqueID ] ||
- (outerCache[ node.uniqueID ] = {});
-
- cache = uniqueCache[ type ] || [];
- nodeIndex = cache[ 0 ] === dirruns && cache[ 1 ];
- diff = nodeIndex && cache[ 2 ];
- node = nodeIndex && parent.childNodes[ nodeIndex ];
-
- while ( (node = ++nodeIndex && node && node[ dir ] ||
-
- // Fallback to seeking `elem` from the start
- (diff = nodeIndex = 0) || start.pop()) ) {
-
- // When found, cache indexes on `parent` and break
- if ( node.nodeType === 1 && ++diff && node === elem ) {
- uniqueCache[ type ] = [ dirruns, nodeIndex, diff ];
- break;
- }
- }
-
- } else {
- // Use previously-cached element index if available
- if ( useCache ) {
- // ...in a gzip-friendly way
- node = elem;
- outerCache = node[ expando ] || (node[ expando ] = {});
-
- // Support: IE <9 only
- // Defend against cloned attroperties (jQuery gh-1709)
- uniqueCache = outerCache[ node.uniqueID ] ||
- (outerCache[ node.uniqueID ] = {});
-
- cache = uniqueCache[ type ] || [];
- nodeIndex = cache[ 0 ] === dirruns && cache[ 1 ];
- diff = nodeIndex;
- }
-
- // xml :nth-child(...)
- // or :nth-last-child(...) or :nth(-last)?-of-type(...)
- if ( diff === false ) {
- // Use the same loop as above to seek `elem` from the start
- while ( (node = ++nodeIndex && node && node[ dir ] ||
- (diff = nodeIndex = 0) || start.pop()) ) {
-
- if ( ( ofType ?
- node.nodeName.toLowerCase() === name :
- node.nodeType === 1 ) &&
- ++diff ) {
-
- // Cache the index of each encountered element
- if ( useCache ) {
- outerCache = node[ expando ] || (node[ expando ] = {});
-
- // Support: IE <9 only
- // Defend against cloned attroperties (jQuery gh-1709)
- uniqueCache = outerCache[ node.uniqueID ] ||
- (outerCache[ node.uniqueID ] = {});
-
- uniqueCache[ type ] = [ dirruns, diff ];
- }
-
- if ( node === elem ) {
- break;
- }
- }
- }
- }
- }
-
- // Incorporate the offset, then check against cycle size
- diff -= last;
- return diff === first || ( diff % first === 0 && diff / first >= 0 );
- }
- };
- },
-
- "PSEUDO": function( pseudo, argument ) {
- // pseudo-class names are case-insensitive
- // http://www.w3.org/TR/selectors/#pseudo-classes
- // Prioritize by case sensitivity in case custom pseudos are added with uppercase letters
- // Remember that setFilters inherits from pseudos
- var args,
- fn = Expr.pseudos[ pseudo ] || Expr.setFilters[ pseudo.toLowerCase() ] ||
- Sizzle.error( "unsupported pseudo: " + pseudo );
-
- // The user may use createPseudo to indicate that
- // arguments are needed to create the filter function
- // just as Sizzle does
- if ( fn[ expando ] ) {
- return fn( argument );
- }
-
- // But maintain support for old signatures
- if ( fn.length > 1 ) {
- args = [ pseudo, pseudo, "", argument ];
- return Expr.setFilters.hasOwnProperty( pseudo.toLowerCase() ) ?
- markFunction(function( seed, matches ) {
- var idx,
- matched = fn( seed, argument ),
- i = matched.length;
- while ( i-- ) {
- idx = indexOf( seed, matched[i] );
- seed[ idx ] = !( matches[ idx ] = matched[i] );
- }
- }) :
- function( elem ) {
- return fn( elem, 0, args );
- };
- }
-
- return fn;
- }
- },
-
- pseudos: {
- // Potentially complex pseudos
- "not": markFunction(function( selector ) {
- // Trim the selector passed to compile
- // to avoid treating leading and trailing
- // spaces as combinators
- var input = [],
- results = [],
- matcher = compile( selector.replace( rtrim, "$1" ) );
-
- return matcher[ expando ] ?
- markFunction(function( seed, matches, context, xml ) {
- var elem,
- unmatched = matcher( seed, null, xml, [] ),
- i = seed.length;
-
- // Match elements unmatched by `matcher`
- while ( i-- ) {
- if ( (elem = unmatched[i]) ) {
- seed[i] = !(matches[i] = elem);
- }
- }
- }) :
- function( elem, context, xml ) {
- input[0] = elem;
- matcher( input, null, xml, results );
- // Don't keep the element (issue #299)
- input[0] = null;
- return !results.pop();
- };
- }),
-
- "has": markFunction(function( selector ) {
- return function( elem ) {
- return Sizzle( selector, elem ).length > 0;
- };
- }),
-
- "contains": markFunction(function( text ) {
- text = text.replace( runescape, funescape );
- return function( elem ) {
- return ( elem.textContent || elem.innerText || getText( elem ) ).indexOf( text ) > -1;
- };
- }),
-
- // "Whether an element is represented by a :lang() selector
- // is based solely on the element's language value
- // being equal to the identifier C,
- // or beginning with the identifier C immediately followed by "-".
- // The matching of C against the element's language value is performed case-insensitively.
- // The identifier C does not have to be a valid language name."
- // http://www.w3.org/TR/selectors/#lang-pseudo
- "lang": markFunction( function( lang ) {
- // lang value must be a valid identifier
- if ( !ridentifier.test(lang || "") ) {
- Sizzle.error( "unsupported lang: " + lang );
- }
- lang = lang.replace( runescape, funescape ).toLowerCase();
- return function( elem ) {
- var elemLang;
- do {
- if ( (elemLang = documentIsHTML ?
- elem.lang :
- elem.getAttribute("xml:lang") || elem.getAttribute("lang")) ) {
-
- elemLang = elemLang.toLowerCase();
- return elemLang === lang || elemLang.indexOf( lang + "-" ) === 0;
- }
- } while ( (elem = elem.parentNode) && elem.nodeType === 1 );
- return false;
- };
- }),
-
- // Miscellaneous
- "target": function( elem ) {
- var hash = window.location && window.location.hash;
- return hash && hash.slice( 1 ) === elem.id;
- },
-
- "root": function( elem ) {
- return elem === docElem;
- },
-
- "focus": function( elem ) {
- return elem === document.activeElement && (!document.hasFocus || document.hasFocus()) && !!(elem.type || elem.href || ~elem.tabIndex);
- },
-
- // Boolean properties
- "enabled": createDisabledPseudo( false ),
- "disabled": createDisabledPseudo( true ),
-
- "checked": function( elem ) {
- // In CSS3, :checked should return both checked and selected elements
- // http://www.w3.org/TR/2011/REC-css3-selectors-20110929/#checked
- var nodeName = elem.nodeName.toLowerCase();
- return (nodeName === "input" && !!elem.checked) || (nodeName === "option" && !!elem.selected);
- },
-
- "selected": function( elem ) {
- // Accessing this property makes selected-by-default
- // options in Safari work properly
- if ( elem.parentNode ) {
- elem.parentNode.selectedIndex;
- }
-
- return elem.selected === true;
- },
-
- // Contents
- "empty": function( elem ) {
- // http://www.w3.org/TR/selectors/#empty-pseudo
- // :empty is negated by element (1) or content nodes (text: 3; cdata: 4; entity ref: 5),
- // but not by others (comment: 8; processing instruction: 7; etc.)
- // nodeType < 6 works because attributes (2) do not appear as children
- for ( elem = elem.firstChild; elem; elem = elem.nextSibling ) {
- if ( elem.nodeType < 6 ) {
- return false;
- }
- }
- return true;
- },
-
- "parent": function( elem ) {
- return !Expr.pseudos["empty"]( elem );
- },
-
- // Element/input types
- "header": function( elem ) {
- return rheader.test( elem.nodeName );
- },
-
- "input": function( elem ) {
- return rinputs.test( elem.nodeName );
- },
-
- "button": function( elem ) {
- var name = elem.nodeName.toLowerCase();
- return name === "input" && elem.type === "button" || name === "button";
- },
-
- "text": function( elem ) {
- var attr;
- return elem.nodeName.toLowerCase() === "input" &&
- elem.type === "text" &&
-
- // Support: IE<8
- // New HTML5 attribute values (e.g., "search") appear with elem.type === "text"
- ( (attr = elem.getAttribute("type")) == null || attr.toLowerCase() === "text" );
- },
-
- // Position-in-collection
- "first": createPositionalPseudo(function() {
- return [ 0 ];
- }),
-
- "last": createPositionalPseudo(function( matchIndexes, length ) {
- return [ length - 1 ];
- }),
-
- "eq": createPositionalPseudo(function( matchIndexes, length, argument ) {
- return [ argument < 0 ? argument + length : argument ];
- }),
-
- "even": createPositionalPseudo(function( matchIndexes, length ) {
- var i = 0;
- for ( ; i < length; i += 2 ) {
- matchIndexes.push( i );
- }
- return matchIndexes;
- }),
-
- "odd": createPositionalPseudo(function( matchIndexes, length ) {
- var i = 1;
- for ( ; i < length; i += 2 ) {
- matchIndexes.push( i );
- }
- return matchIndexes;
- }),
-
- "lt": createPositionalPseudo(function( matchIndexes, length, argument ) {
- var i = argument < 0 ? argument + length : argument;
- for ( ; --i >= 0; ) {
- matchIndexes.push( i );
- }
- return matchIndexes;
- }),
-
- "gt": createPositionalPseudo(function( matchIndexes, length, argument ) {
- var i = argument < 0 ? argument + length : argument;
- for ( ; ++i < length; ) {
- matchIndexes.push( i );
- }
- return matchIndexes;
- })
- }
-};
-
-Expr.pseudos["nth"] = Expr.pseudos["eq"];
-
-// Add button/input type pseudos
-for ( i in { radio: true, checkbox: true, file: true, password: true, image: true } ) {
- Expr.pseudos[ i ] = createInputPseudo( i );
-}
-for ( i in { submit: true, reset: true } ) {
- Expr.pseudos[ i ] = createButtonPseudo( i );
-}
-
-// Easy API for creating new setFilters
-function setFilters() {}
-setFilters.prototype = Expr.filters = Expr.pseudos;
-Expr.setFilters = new setFilters();
-
-tokenize = Sizzle.tokenize = function( selector, parseOnly ) {
- var matched, match, tokens, type,
- soFar, groups, preFilters,
- cached = tokenCache[ selector + " " ];
-
- if ( cached ) {
- return parseOnly ? 0 : cached.slice( 0 );
- }
-
- soFar = selector;
- groups = [];
- preFilters = Expr.preFilter;
-
- while ( soFar ) {
-
- // Comma and first run
- if ( !matched || (match = rcomma.exec( soFar )) ) {
- if ( match ) {
- // Don't consume trailing commas as valid
- soFar = soFar.slice( match[0].length ) || soFar;
- }
- groups.push( (tokens = []) );
- }
-
- matched = false;
-
- // Combinators
- if ( (match = rcombinators.exec( soFar )) ) {
- matched = match.shift();
- tokens.push({
- value: matched,
- // Cast descendant combinators to space
- type: match[0].replace( rtrim, " " )
- });
- soFar = soFar.slice( matched.length );
- }
-
- // Filters
- for ( type in Expr.filter ) {
- if ( (match = matchExpr[ type ].exec( soFar )) && (!preFilters[ type ] ||
- (match = preFilters[ type ]( match ))) ) {
- matched = match.shift();
- tokens.push({
- value: matched,
- type: type,
- matches: match
- });
- soFar = soFar.slice( matched.length );
- }
- }
-
- if ( !matched ) {
- break;
- }
- }
-
- // Return the length of the invalid excess
- // if we're just parsing
- // Otherwise, throw an error or return tokens
- return parseOnly ?
- soFar.length :
- soFar ?
- Sizzle.error( selector ) :
- // Cache the tokens
- tokenCache( selector, groups ).slice( 0 );
-};
-
-function toSelector( tokens ) {
- var i = 0,
- len = tokens.length,
- selector = "";
- for ( ; i < len; i++ ) {
- selector += tokens[i].value;
- }
- return selector;
-}
-
-function addCombinator( matcher, combinator, base ) {
- var dir = combinator.dir,
- skip = combinator.next,
- key = skip || dir,
- checkNonElements = base && key === "parentNode",
- doneName = done++;
-
- return combinator.first ?
- // Check against closest ancestor/preceding element
- function( elem, context, xml ) {
- while ( (elem = elem[ dir ]) ) {
- if ( elem.nodeType === 1 || checkNonElements ) {
- return matcher( elem, context, xml );
- }
- }
- return false;
- } :
-
- // Check against all ancestor/preceding elements
- function( elem, context, xml ) {
- var oldCache, uniqueCache, outerCache,
- newCache = [ dirruns, doneName ];
-
- // We can't set arbitrary data on XML nodes, so they don't benefit from combinator caching
- if ( xml ) {
- while ( (elem = elem[ dir ]) ) {
- if ( elem.nodeType === 1 || checkNonElements ) {
- if ( matcher( elem, context, xml ) ) {
- return true;
- }
- }
- }
- } else {
- while ( (elem = elem[ dir ]) ) {
- if ( elem.nodeType === 1 || checkNonElements ) {
- outerCache = elem[ expando ] || (elem[ expando ] = {});
-
- // Support: IE <9 only
- // Defend against cloned attroperties (jQuery gh-1709)
- uniqueCache = outerCache[ elem.uniqueID ] || (outerCache[ elem.uniqueID ] = {});
-
- if ( skip && skip === elem.nodeName.toLowerCase() ) {
- elem = elem[ dir ] || elem;
- } else if ( (oldCache = uniqueCache[ key ]) &&
- oldCache[ 0 ] === dirruns && oldCache[ 1 ] === doneName ) {
-
- // Assign to newCache so results back-propagate to previous elements
- return (newCache[ 2 ] = oldCache[ 2 ]);
- } else {
- // Reuse newcache so results back-propagate to previous elements
- uniqueCache[ key ] = newCache;
-
- // A match means we're done; a fail means we have to keep checking
- if ( (newCache[ 2 ] = matcher( elem, context, xml )) ) {
- return true;
- }
- }
- }
- }
- }
- return false;
- };
-}
-
-function elementMatcher( matchers ) {
- return matchers.length > 1 ?
- function( elem, context, xml ) {
- var i = matchers.length;
- while ( i-- ) {
- if ( !matchers[i]( elem, context, xml ) ) {
- return false;
- }
- }
- return true;
- } :
- matchers[0];
-}
-
-function multipleContexts( selector, contexts, results ) {
- var i = 0,
- len = contexts.length;
- for ( ; i < len; i++ ) {
- Sizzle( selector, contexts[i], results );
- }
- return results;
-}
-
-function condense( unmatched, map, filter, context, xml ) {
- var elem,
- newUnmatched = [],
- i = 0,
- len = unmatched.length,
- mapped = map != null;
-
- for ( ; i < len; i++ ) {
- if ( (elem = unmatched[i]) ) {
- if ( !filter || filter( elem, context, xml ) ) {
- newUnmatched.push( elem );
- if ( mapped ) {
- map.push( i );
- }
- }
- }
- }
-
- return newUnmatched;
-}
-
-function setMatcher( preFilter, selector, matcher, postFilter, postFinder, postSelector ) {
- if ( postFilter && !postFilter[ expando ] ) {
- postFilter = setMatcher( postFilter );
- }
- if ( postFinder && !postFinder[ expando ] ) {
- postFinder = setMatcher( postFinder, postSelector );
- }
- return markFunction(function( seed, results, context, xml ) {
- var temp, i, elem,
- preMap = [],
- postMap = [],
- preexisting = results.length,
-
- // Get initial elements from seed or context
- elems = seed || multipleContexts( selector || "*", context.nodeType ? [ context ] : context, [] ),
-
- // Prefilter to get matcher input, preserving a map for seed-results synchronization
- matcherIn = preFilter && ( seed || !selector ) ?
- condense( elems, preMap, preFilter, context, xml ) :
- elems,
-
- matcherOut = matcher ?
- // If we have a postFinder, or filtered seed, or non-seed postFilter or preexisting results,
- postFinder || ( seed ? preFilter : preexisting || postFilter ) ?
-
- // ...intermediate processing is necessary
- [] :
-
- // ...otherwise use results directly
- results :
- matcherIn;
-
- // Find primary matches
- if ( matcher ) {
- matcher( matcherIn, matcherOut, context, xml );
- }
-
- // Apply postFilter
- if ( postFilter ) {
- temp = condense( matcherOut, postMap );
- postFilter( temp, [], context, xml );
-
- // Un-match failing elements by moving them back to matcherIn
- i = temp.length;
- while ( i-- ) {
- if ( (elem = temp[i]) ) {
- matcherOut[ postMap[i] ] = !(matcherIn[ postMap[i] ] = elem);
- }
- }
- }
-
- if ( seed ) {
- if ( postFinder || preFilter ) {
- if ( postFinder ) {
- // Get the final matcherOut by condensing this intermediate into postFinder contexts
- temp = [];
- i = matcherOut.length;
- while ( i-- ) {
- if ( (elem = matcherOut[i]) ) {
- // Restore matcherIn since elem is not yet a final match
- temp.push( (matcherIn[i] = elem) );
- }
- }
- postFinder( null, (matcherOut = []), temp, xml );
- }
-
- // Move matched elements from seed to results to keep them synchronized
- i = matcherOut.length;
- while ( i-- ) {
- if ( (elem = matcherOut[i]) &&
- (temp = postFinder ? indexOf( seed, elem ) : preMap[i]) > -1 ) {
-
- seed[temp] = !(results[temp] = elem);
- }
- }
- }
-
- // Add elements to results, through postFinder if defined
- } else {
- matcherOut = condense(
- matcherOut === results ?
- matcherOut.splice( preexisting, matcherOut.length ) :
- matcherOut
- );
- if ( postFinder ) {
- postFinder( null, results, matcherOut, xml );
- } else {
- push.apply( results, matcherOut );
- }
- }
- });
-}
-
-function matcherFromTokens( tokens ) {
- var checkContext, matcher, j,
- len = tokens.length,
- leadingRelative = Expr.relative[ tokens[0].type ],
- implicitRelative = leadingRelative || Expr.relative[" "],
- i = leadingRelative ? 1 : 0,
-
- // The foundational matcher ensures that elements are reachable from top-level context(s)
- matchContext = addCombinator( function( elem ) {
- return elem === checkContext;
- }, implicitRelative, true ),
- matchAnyContext = addCombinator( function( elem ) {
- return indexOf( checkContext, elem ) > -1;
- }, implicitRelative, true ),
- matchers = [ function( elem, context, xml ) {
- var ret = ( !leadingRelative && ( xml || context !== outermostContext ) ) || (
- (checkContext = context).nodeType ?
- matchContext( elem, context, xml ) :
- matchAnyContext( elem, context, xml ) );
- // Avoid hanging onto element (issue #299)
- checkContext = null;
- return ret;
- } ];
-
- for ( ; i < len; i++ ) {
- if ( (matcher = Expr.relative[ tokens[i].type ]) ) {
- matchers = [ addCombinator(elementMatcher( matchers ), matcher) ];
- } else {
- matcher = Expr.filter[ tokens[i].type ].apply( null, tokens[i].matches );
-
- // Return special upon seeing a positional matcher
- if ( matcher[ expando ] ) {
- // Find the next relative operator (if any) for proper handling
- j = ++i;
- for ( ; j < len; j++ ) {
- if ( Expr.relative[ tokens[j].type ] ) {
- break;
- }
- }
- return setMatcher(
- i > 1 && elementMatcher( matchers ),
- i > 1 && toSelector(
- // If the preceding token was a descendant combinator, insert an implicit any-element `*`
- tokens.slice( 0, i - 1 ).concat({ value: tokens[ i - 2 ].type === " " ? "*" : "" })
- ).replace( rtrim, "$1" ),
- matcher,
- i < j && matcherFromTokens( tokens.slice( i, j ) ),
- j < len && matcherFromTokens( (tokens = tokens.slice( j )) ),
- j < len && toSelector( tokens )
- );
- }
- matchers.push( matcher );
- }
- }
-
- return elementMatcher( matchers );
-}
-
-function matcherFromGroupMatchers( elementMatchers, setMatchers ) {
- var bySet = setMatchers.length > 0,
- byElement = elementMatchers.length > 0,
- superMatcher = function( seed, context, xml, results, outermost ) {
- var elem, j, matcher,
- matchedCount = 0,
- i = "0",
- unmatched = seed && [],
- setMatched = [],
- contextBackup = outermostContext,
- // We must always have either seed elements or outermost context
- elems = seed || byElement && Expr.find["TAG"]( "*", outermost ),
- // Use integer dirruns iff this is the outermost matcher
- dirrunsUnique = (dirruns += contextBackup == null ? 1 : Math.random() || 0.1),
- len = elems.length;
-
- if ( outermost ) {
- outermostContext = context === document || context || outermost;
- }
-
- // Add elements passing elementMatchers directly to results
- // Support: IE<9, Safari
- // Tolerate NodeList properties (IE: "length"; Safari: <number>) matching elements by id
- for ( ; i !== len && (elem = elems[i]) != null; i++ ) {
- if ( byElement && elem ) {
- j = 0;
- if ( !context && elem.ownerDocument !== document ) {
- setDocument( elem );
- xml = !documentIsHTML;
- }
- while ( (matcher = elementMatchers[j++]) ) {
- if ( matcher( elem, context || document, xml) ) {
- results.push( elem );
- break;
- }
- }
- if ( outermost ) {
- dirruns = dirrunsUnique;
- }
- }
-
- // Track unmatched elements for set filters
- if ( bySet ) {
- // They will have gone through all possible matchers
- if ( (elem = !matcher && elem) ) {
- matchedCount--;
- }
-
- // Lengthen the array for every element, matched or not
- if ( seed ) {
- unmatched.push( elem );
- }
- }
- }
-
- // `i` is now the count of elements visited above, and adding it to `matchedCount`
- // makes the latter nonnegative.
- matchedCount += i;
-
- // Apply set filters to unmatched elements
- // NOTE: This can be skipped if there are no unmatched elements (i.e., `matchedCount`
- // equals `i`), unless we didn't visit _any_ elements in the above loop because we have
- // no element matchers and no seed.
- // Incrementing an initially-string "0" `i` allows `i` to remain a string only in that
- // case, which will result in a "00" `matchedCount` that differs from `i` but is also
- // numerically zero.
- if ( bySet && i !== matchedCount ) {
- j = 0;
- while ( (matcher = setMatchers[j++]) ) {
- matcher( unmatched, setMatched, context, xml );
- }
-
- if ( seed ) {
- // Reintegrate element matches to eliminate the need for sorting
- if ( matchedCount > 0 ) {
- while ( i-- ) {
- if ( !(unmatched[i] || setMatched[i]) ) {
- setMatched[i] = pop.call( results );
- }
- }
- }
-
- // Discard index placeholder values to get only actual matches
- setMatched = condense( setMatched );
- }
-
- // Add matches to results
- push.apply( results, setMatched );
-
- // Seedless set matches succeeding multiple successful matchers stipulate sorting
- if ( outermost && !seed && setMatched.length > 0 &&
- ( matchedCount + setMatchers.length ) > 1 ) {
-
- Sizzle.uniqueSort( results );
- }
- }
-
- // Override manipulation of globals by nested matchers
- if ( outermost ) {
- dirruns = dirrunsUnique;
- outermostContext = contextBackup;
- }
-
- return unmatched;
- };
-
- return bySet ?
- markFunction( superMatcher ) :
- superMatcher;
-}
-
-compile = Sizzle.compile = function( selector, match /* Internal Use Only */ ) {
- var i,
- setMatchers = [],
- elementMatchers = [],
- cached = compilerCache[ selector + " " ];
-
- if ( !cached ) {
- // Generate a function of recursive functions that can be used to check each element
- if ( !match ) {
- match = tokenize( selector );
- }
- i = match.length;
- while ( i-- ) {
- cached = matcherFromTokens( match[i] );
- if ( cached[ expando ] ) {
- setMatchers.push( cached );
- } else {
- elementMatchers.push( cached );
- }
- }
-
- // Cache the compiled function
- cached = compilerCache( selector, matcherFromGroupMatchers( elementMatchers, setMatchers ) );
-
- // Save selector and tokenization
- cached.selector = selector;
- }
- return cached;
-};
-
-/**
- * A low-level selection function that works with Sizzle's compiled
- * selector functions
- * @param {String|Function} selector A selector or a pre-compiled
- * selector function built with Sizzle.compile
- * @param {Element} context
- * @param {Array} [results]
- * @param {Array} [seed] A set of elements to match against
- */
-select = Sizzle.select = function( selector, context, results, seed ) {
- var i, tokens, token, type, find,
- compiled = typeof selector === "function" && selector,
- match = !seed && tokenize( (selector = compiled.selector || selector) );
-
- results = results || [];
-
- // Try to minimize operations if there is only one selector in the list and no seed
- // (the latter of which guarantees us context)
- if ( match.length === 1 ) {
-
- // Reduce context if the leading compound selector is an ID
- tokens = match[0] = match[0].slice( 0 );
- if ( tokens.length > 2 && (token = tokens[0]).type === "ID" &&
- context.nodeType === 9 && documentIsHTML && Expr.relative[ tokens[1].type ] ) {
-
- context = ( Expr.find["ID"]( token.matches[0].replace(runescape, funescape), context ) || [] )[0];
- if ( !context ) {
- return results;
-
- // Precompiled matchers will still verify ancestry, so step up a level
- } else if ( compiled ) {
- context = context.parentNode;
- }
-
- selector = selector.slice( tokens.shift().value.length );
- }
-
- // Fetch a seed set for right-to-left matching
- i = matchExpr["needsContext"].test( selector ) ? 0 : tokens.length;
- while ( i-- ) {
- token = tokens[i];
-
- // Abort if we hit a combinator
- if ( Expr.relative[ (type = token.type) ] ) {
- break;
- }
- if ( (find = Expr.find[ type ]) ) {
- // Search, expanding context for leading sibling combinators
- if ( (seed = find(
- token.matches[0].replace( runescape, funescape ),
- rsibling.test( tokens[0].type ) && testContext( context.parentNode ) || context
- )) ) {
-
- // If seed is empty or no tokens remain, we can return early
- tokens.splice( i, 1 );
- selector = seed.length && toSelector( tokens );
- if ( !selector ) {
- push.apply( results, seed );
- return results;
- }
-
- break;
- }
- }
- }
- }
-
- // Compile and execute a filtering function if one is not provided
- // Provide `match` to avoid retokenization if we modified the selector above
- ( compiled || compile( selector, match ) )(
- seed,
- context,
- !documentIsHTML,
- results,
- !context || rsibling.test( selector ) && testContext( context.parentNode ) || context
- );
- return results;
-};
-
-// One-time assignments
-
-// Sort stability
-support.sortStable = expando.split("").sort( sortOrder ).join("") === expando;
-
-// Support: Chrome 14-35+
-// Always assume duplicates if they aren't passed to the comparison function
-support.detectDuplicates = !!hasDuplicate;
-
-// Initialize against the default document
-setDocument();
-
-// Support: Webkit<537.32 - Safari 6.0.3/Chrome 25 (fixed in Chrome 27)
-// Detached nodes confoundingly follow *each other*
-support.sortDetached = assert(function( el ) {
- // Should return 1, but returns 4 (following)
- return el.compareDocumentPosition( document.createElement("fieldset") ) & 1;
-});
-
-// Support: IE<8
-// Prevent attribute/property "interpolation"
-// https://msdn.microsoft.com/en-us/library/ms536429%28VS.85%29.aspx
-if ( !assert(function( el ) {
- el.innerHTML = "<a href='#'></a>";
- return el.firstChild.getAttribute("href") === "#" ;
-}) ) {
- addHandle( "type|href|height|width", function( elem, name, isXML ) {
- if ( !isXML ) {
- return elem.getAttribute( name, name.toLowerCase() === "type" ? 1 : 2 );
- }
- });
-}
-
-// Support: IE<9
-// Use defaultValue in place of getAttribute("value")
-if ( !support.attributes || !assert(function( el ) {
- el.innerHTML = "<input/>";
- el.firstChild.setAttribute( "value", "" );
- return el.firstChild.getAttribute( "value" ) === "";
-}) ) {
- addHandle( "value", function( elem, name, isXML ) {
- if ( !isXML && elem.nodeName.toLowerCase() === "input" ) {
- return elem.defaultValue;
- }
- });
-}
-
-// Support: IE<9
-// Use getAttributeNode to fetch booleans when getAttribute lies
-if ( !assert(function( el ) {
- return el.getAttribute("disabled") == null;
-}) ) {
- addHandle( booleans, function( elem, name, isXML ) {
- var val;
- if ( !isXML ) {
- return elem[ name ] === true ? name.toLowerCase() :
- (val = elem.getAttributeNode( name )) && val.specified ?
- val.value :
- null;
- }
- });
-}
-
-return Sizzle;
-
-})( window );
-
-
-
-jQuery.find = Sizzle;
-jQuery.expr = Sizzle.selectors;
-
-// Deprecated
-jQuery.expr[ ":" ] = jQuery.expr.pseudos;
-jQuery.uniqueSort = jQuery.unique = Sizzle.uniqueSort;
-jQuery.text = Sizzle.getText;
-jQuery.isXMLDoc = Sizzle.isXML;
-jQuery.contains = Sizzle.contains;
-jQuery.escapeSelector = Sizzle.escape;
-
-
-
-
-var dir = function( elem, dir, until ) {
- var matched = [],
- truncate = until !== undefined;
-
- while ( ( elem = elem[ dir ] ) && elem.nodeType !== 9 ) {
- if ( elem.nodeType === 1 ) {
- if ( truncate && jQuery( elem ).is( until ) ) {
- break;
- }
- matched.push( elem );
- }
- }
- return matched;
-};
-
-
-var siblings = function( n, elem ) {
- var matched = [];
-
- for ( ; n; n = n.nextSibling ) {
- if ( n.nodeType === 1 && n !== elem ) {
- matched.push( n );
- }
- }
-
- return matched;
-};
-
-
-var rneedsContext = jQuery.expr.match.needsContext;
-
-
-
-function nodeName( elem, name ) {
-
- return elem.nodeName && elem.nodeName.toLowerCase() === name.toLowerCase();
-
-};
-var rsingleTag = ( /^<([a-z][^\/\0>:\x20\t\r\n\f]*)[\x20\t\r\n\f]*\/?>(?:<\/\1>|)$/i );
-
-
-
-var risSimple = /^.[^:#\[\.,]*$/;
-
-// Implement the identical functionality for filter and not
-function winnow( elements, qualifier, not ) {
- if ( jQuery.isFunction( qualifier ) ) {
- return jQuery.grep( elements, function( elem, i ) {
- return !!qualifier.call( elem, i, elem ) !== not;
- } );
- }
-
- // Single element
- if ( qualifier.nodeType ) {
- return jQuery.grep( elements, function( elem ) {
- return ( elem === qualifier ) !== not;
- } );
- }
-
- // Arraylike of elements (jQuery, arguments, Array)
- if ( typeof qualifier !== "string" ) {
- return jQuery.grep( elements, function( elem ) {
- return ( indexOf.call( qualifier, elem ) > -1 ) !== not;
- } );
- }
-
- // Simple selector that can be filtered directly, removing non-Elements
- if ( risSimple.test( qualifier ) ) {
- return jQuery.filter( qualifier, elements, not );
- }
-
- // Complex selector, compare the two sets, removing non-Elements
- qualifier = jQuery.filter( qualifier, elements );
- return jQuery.grep( elements, function( elem ) {
- return ( indexOf.call( qualifier, elem ) > -1 ) !== not && elem.nodeType === 1;
- } );
-}
-
-jQuery.filter = function( expr, elems, not ) {
- var elem = elems[ 0 ];
-
- if ( not ) {
- expr = ":not(" + expr + ")";
- }
-
- if ( elems.length === 1 && elem.nodeType === 1 ) {
- return jQuery.find.matchesSelector( elem, expr ) ? [ elem ] : [];
- }
-
- return jQuery.find.matches( expr, jQuery.grep( elems, function( elem ) {
- return elem.nodeType === 1;
- } ) );
-};
-
-jQuery.fn.extend( {
- find: function( selector ) {
- var i, ret,
- len = this.length,
- self = this;
-
- if ( typeof selector !== "string" ) {
- return this.pushStack( jQuery( selector ).filter( function() {
- for ( i = 0; i < len; i++ ) {
- if ( jQuery.contains( self[ i ], this ) ) {
- return true;
- }
- }
- } ) );
- }
-
- ret = this.pushStack( [] );
-
- for ( i = 0; i < len; i++ ) {
- jQuery.find( selector, self[ i ], ret );
- }
-
- return len > 1 ? jQuery.uniqueSort( ret ) : ret;
- },
- filter: function( selector ) {
- return this.pushStack( winnow( this, selector || [], false ) );
- },
- not: function( selector ) {
- return this.pushStack( winnow( this, selector || [], true ) );
- },
- is: function( selector ) {
- return !!winnow(
- this,
-
- // If this is a positional/relative selector, check membership in the returned set
- // so $("p:first").is("p:last") won't return true for a doc with two "p".
- typeof selector === "string" && rneedsContext.test( selector ) ?
- jQuery( selector ) :
- selector || [],
- false
- ).length;
- }
-} );
-
-
-// Initialize a jQuery object
-
-
-// A central reference to the root jQuery(document)
-var rootjQuery,
-
- // A simple way to check for HTML strings
- // Prioritize #id over <tag> to avoid XSS via location.hash (#9521)
- // Strict HTML recognition (#11290: must start with <)
- // Shortcut simple #id case for speed
- rquickExpr = /^(?:\s*(<[\w\W]+>)[^>]*|#([\w-]+))$/,
-
- init = jQuery.fn.init = function( selector, context, root ) {
- var match, elem;
-
- // HANDLE: $(""), $(null), $(undefined), $(false)
- if ( !selector ) {
- return this;
- }
-
- // Method init() accepts an alternate rootjQuery
- // so migrate can support jQuery.sub (gh-2101)
- root = root || rootjQuery;
-
- // Handle HTML strings
- if ( typeof selector === "string" ) {
- if ( selector[ 0 ] === "<" &&
- selector[ selector.length - 1 ] === ">" &&
- selector.length >= 3 ) {
-
- // Assume that strings that start and end with <> are HTML and skip the regex check
- match = [ null, selector, null ];
-
- } else {
- match = rquickExpr.exec( selector );
- }
-
- // Match html or make sure no context is specified for #id
- if ( match && ( match[ 1 ] || !context ) ) {
-
- // HANDLE: $(html) -> $(array)
- if ( match[ 1 ] ) {
- context = context instanceof jQuery ? context[ 0 ] : context;
-
- // Option to run scripts is true for back-compat
- // Intentionally let the error be thrown if parseHTML is not present
- jQuery.merge( this, jQuery.parseHTML(
- match[ 1 ],
- context && context.nodeType ? context.ownerDocument || context : document,
- true
- ) );
-
- // HANDLE: $(html, props)
- if ( rsingleTag.test( match[ 1 ] ) && jQuery.isPlainObject( context ) ) {
- for ( match in context ) {
-
- // Properties of context are called as methods if possible
- if ( jQuery.isFunction( this[ match ] ) ) {
- this[ match ]( context[ match ] );
-
- // ...and otherwise set as attributes
- } else {
- this.attr( match, context[ match ] );
- }
- }
- }
-
- return this;
-
- // HANDLE: $(#id)
- } else {
- elem = document.getElementById( match[ 2 ] );
-
- if ( elem ) {
-
- // Inject the element directly into the jQuery object
- this[ 0 ] = elem;
- this.length = 1;
- }
- return this;
- }
-
- // HANDLE: $(expr, $(...))
- } else if ( !context || context.jquery ) {
- return ( context || root ).find( selector );
-
- // HANDLE: $(expr, context)
- // (which is just equivalent to: $(context).find(expr)
- } else {
- return this.constructor( context ).find( selector );
- }
-
- // HANDLE: $(DOMElement)
- } else if ( selector.nodeType ) {
- this[ 0 ] = selector;
- this.length = 1;
- return this;
-
- // HANDLE: $(function)
- // Shortcut for document ready
- } else if ( jQuery.isFunction( selector ) ) {
- return root.ready !== undefined ?
- root.ready( selector ) :
-
- // Execute immediately if ready is not present
- selector( jQuery );
- }
-
- return jQuery.makeArray( selector, this );
- };
-
-// Give the init function the jQuery prototype for later instantiation
-init.prototype = jQuery.fn;
-
-// Initialize central reference
-rootjQuery = jQuery( document );
-
-
-var rparentsprev = /^(?:parents|prev(?:Until|All))/,
-
- // Methods guaranteed to produce a unique set when starting from a unique set
- guaranteedUnique = {
- children: true,
- contents: true,
- next: true,
- prev: true
- };
-
-jQuery.fn.extend( {
- has: function( target ) {
- var targets = jQuery( target, this ),
- l = targets.length;
-
- return this.filter( function() {
- var i = 0;
- for ( ; i < l; i++ ) {
- if ( jQuery.contains( this, targets[ i ] ) ) {
- return true;
- }
- }
- } );
- },
-
- closest: function( selectors, context ) {
- var cur,
- i = 0,
- l = this.length,
- matched = [],
- targets = typeof selectors !== "string" && jQuery( selectors );
-
- // Positional selectors never match, since there's no _selection_ context
- if ( !rneedsContext.test( selectors ) ) {
- for ( ; i < l; i++ ) {
- for ( cur = this[ i ]; cur && cur !== context; cur = cur.parentNode ) {
-
- // Always skip document fragments
- if ( cur.nodeType < 11 && ( targets ?
- targets.index( cur ) > -1 :
-
- // Don't pass non-elements to Sizzle
- cur.nodeType === 1 &&
- jQuery.find.matchesSelector( cur, selectors ) ) ) {
-
- matched.push( cur );
- break;
- }
- }
- }
- }
-
- return this.pushStack( matched.length > 1 ? jQuery.uniqueSort( matched ) : matched );
- },
-
- // Determine the position of an element within the set
- index: function( elem ) {
-
- // No argument, return index in parent
- if ( !elem ) {
- return ( this[ 0 ] && this[ 0 ].parentNode ) ? this.first().prevAll().length : -1;
- }
-
- // Index in selector
- if ( typeof elem === "string" ) {
- return indexOf.call( jQuery( elem ), this[ 0 ] );
- }
-
- // Locate the position of the desired element
- return indexOf.call( this,
-
- // If it receives a jQuery object, the first element is used
- elem.jquery ? elem[ 0 ] : elem
- );
- },
-
- add: function( selector, context ) {
- return this.pushStack(
- jQuery.uniqueSort(
- jQuery.merge( this.get(), jQuery( selector, context ) )
- )
- );
- },
-
- addBack: function( selector ) {
- return this.add( selector == null ?
- this.prevObject : this.prevObject.filter( selector )
- );
- }
-} );
-
-function sibling( cur, dir ) {
- while ( ( cur = cur[ dir ] ) && cur.nodeType !== 1 ) {}
- return cur;
-}
-
-jQuery.each( {
- parent: function( elem ) {
- var parent = elem.parentNode;
- return parent && parent.nodeType !== 11 ? parent : null;
- },
- parents: function( elem ) {
- return dir( elem, "parentNode" );
- },
- parentsUntil: function( elem, i, until ) {
- return dir( elem, "parentNode", until );
- },
- next: function( elem ) {
- return sibling( elem, "nextSibling" );
- },
- prev: function( elem ) {
- return sibling( elem, "previousSibling" );
- },
- nextAll: function( elem ) {
- return dir( elem, "nextSibling" );
- },
- prevAll: function( elem ) {
- return dir( elem, "previousSibling" );
- },
- nextUntil: function( elem, i, until ) {
- return dir( elem, "nextSibling", until );
- },
- prevUntil: function( elem, i, until ) {
- return dir( elem, "previousSibling", until );
- },
- siblings: function( elem ) {
- return siblings( ( elem.parentNode || {} ).firstChild, elem );
- },
- children: function( elem ) {
- return siblings( elem.firstChild );
- },
- contents: function( elem ) {
- if ( nodeName( elem, "iframe" ) ) {
- return elem.contentDocument;
- }
-
- // Support: IE 9 - 11 only, iOS 7 only, Android Browser <=4.3 only
- // Treat the template element as a regular one in browsers that
- // don't support it.
- if ( nodeName( elem, "template" ) ) {
- elem = elem.content || elem;
- }
-
- return jQuery.merge( [], elem.childNodes );
- }
-}, function( name, fn ) {
- jQuery.fn[ name ] = function( until, selector ) {
- var matched = jQuery.map( this, fn, until );
-
- if ( name.slice( -5 ) !== "Until" ) {
- selector = until;
- }
-
- if ( selector && typeof selector === "string" ) {
- matched = jQuery.filter( selector, matched );
- }
-
- if ( this.length > 1 ) {
-
- // Remove duplicates
- if ( !guaranteedUnique[ name ] ) {
- jQuery.uniqueSort( matched );
- }
-
- // Reverse order for parents* and prev-derivatives
- if ( rparentsprev.test( name ) ) {
- matched.reverse();
- }
- }
-
- return this.pushStack( matched );
- };
-} );
-var rnothtmlwhite = ( /[^\x20\t\r\n\f]+/g );
-
-
-
-// Convert String-formatted options into Object-formatted ones
-function createOptions( options ) {
- var object = {};
- jQuery.each( options.match( rnothtmlwhite ) || [], function( _, flag ) {
- object[ flag ] = true;
- } );
- return object;
-}
-
-/*
- * Create a callback list using the following parameters:
- *
- * options: an optional list of space-separated options that will change how
- * the callback list behaves or a more traditional option object
- *
- * By default a callback list will act like an event callback list and can be
- * "fired" multiple times.
- *
- * Possible options:
- *
- * once: will ensure the callback list can only be fired once (like a Deferred)
- *
- * memory: will keep track of previous values and will call any callback added
- * after the list has been fired right away with the latest "memorized"
- * values (like a Deferred)
- *
- * unique: will ensure a callback can only be added once (no duplicate in the list)
- *
- * stopOnFalse: interrupt callings when a callback returns false
- *
- */
-jQuery.Callbacks = function( options ) {
-
- // Convert options from String-formatted to Object-formatted if needed
- // (we check in cache first)
- options = typeof options === "string" ?
- createOptions( options ) :
- jQuery.extend( {}, options );
-
- var // Flag to know if list is currently firing
- firing,
-
- // Last fire value for non-forgettable lists
- memory,
-
- // Flag to know if list was already fired
- fired,
-
- // Flag to prevent firing
- locked,
-
- // Actual callback list
- list = [],
-
- // Queue of execution data for repeatable lists
- queue = [],
-
- // Index of currently firing callback (modified by add/remove as needed)
- firingIndex = -1,
-
- // Fire callbacks
- fire = function() {
-
- // Enforce single-firing
- locked = locked || options.once;
-
- // Execute callbacks for all pending executions,
- // respecting firingIndex overrides and runtime changes
- fired = firing = true;
- for ( ; queue.length; firingIndex = -1 ) {
- memory = queue.shift();
- while ( ++firingIndex < list.length ) {
-
- // Run callback and check for early termination
- if ( list[ firingIndex ].apply( memory[ 0 ], memory[ 1 ] ) === false &&
- options.stopOnFalse ) {
-
- // Jump to end and forget the data so .add doesn't re-fire
- firingIndex = list.length;
- memory = false;
- }
- }
- }
-
- // Forget the data if we're done with it
- if ( !options.memory ) {
- memory = false;
- }
-
- firing = false;
-
- // Clean up if we're done firing for good
- if ( locked ) {
-
- // Keep an empty list if we have data for future add calls
- if ( memory ) {
- list = [];
-
- // Otherwise, this object is spent
- } else {
- list = "";
- }
- }
- },
-
- // Actual Callbacks object
- self = {
-
- // Add a callback or a collection of callbacks to the list
- add: function() {
- if ( list ) {
-
- // If we have memory from a past run, we should fire after adding
- if ( memory && !firing ) {
- firingIndex = list.length - 1;
- queue.push( memory );
- }
-
- ( function add( args ) {
- jQuery.each( args, function( _, arg ) {
- if ( jQuery.isFunction( arg ) ) {
- if ( !options.unique || !self.has( arg ) ) {
- list.push( arg );
- }
- } else if ( arg && arg.length && jQuery.type( arg ) !== "string" ) {
-
- // Inspect recursively
- add( arg );
- }
- } );
- } )( arguments );
-
- if ( memory && !firing ) {
- fire();
- }
- }
- return this;
- },
-
- // Remove a callback from the list
- remove: function() {
- jQuery.each( arguments, function( _, arg ) {
- var index;
- while ( ( index = jQuery.inArray( arg, list, index ) ) > -1 ) {
- list.splice( index, 1 );
-
- // Handle firing indexes
- if ( index <= firingIndex ) {
- firingIndex--;
- }
- }
- } );
- return this;
- },
-
- // Check if a given callback is in the list.
- // If no argument is given, return whether or not list has callbacks attached.
- has: function( fn ) {
- return fn ?
- jQuery.inArray( fn, list ) > -1 :
- list.length > 0;
- },
-
- // Remove all callbacks from the list
- empty: function() {
- if ( list ) {
- list = [];
- }
- return this;
- },
-
- // Disable .fire and .add
- // Abort any current/pending executions
- // Clear all callbacks and values
- disable: function() {
- locked = queue = [];
- list = memory = "";
- return this;
- },
- disabled: function() {
- return !list;
- },
-
- // Disable .fire
- // Also disable .add unless we have memory (since it would have no effect)
- // Abort any pending executions
- lock: function() {
- locked = queue = [];
- if ( !memory && !firing ) {
- list = memory = "";
- }
- return this;
- },
- locked: function() {
- return !!locked;
- },
-
- // Call all callbacks with the given context and arguments
- fireWith: function( context, args ) {
- if ( !locked ) {
- args = args || [];
- args = [ context, args.slice ? args.slice() : args ];
- queue.push( args );
- if ( !firing ) {
- fire();
- }
- }
- return this;
- },
-
- // Call all the callbacks with the given arguments
- fire: function() {
- self.fireWith( this, arguments );
- return this;
- },
-
- // To know if the callbacks have already been called at least once
- fired: function() {
- return !!fired;
- }
- };
-
- return self;
-};
-
-
-function Identity( v ) {
- return v;
-}
-function Thrower( ex ) {
- throw ex;
-}
-
-function adoptValue( value, resolve, reject, noValue ) {
- var method;
-
- try {
-
- // Check for promise aspect first to privilege synchronous behavior
- if ( value && jQuery.isFunction( ( method = value.promise ) ) ) {
- method.call( value ).done( resolve ).fail( reject );
-
- // Other thenables
- } else if ( value && jQuery.isFunction( ( method = value.then ) ) ) {
- method.call( value, resolve, reject );
-
- // Other non-thenables
- } else {
-
- // Control `resolve` arguments by letting Array#slice cast boolean `noValue` to integer:
- // * false: [ value ].slice( 0 ) => resolve( value )
- // * true: [ value ].slice( 1 ) => resolve()
- resolve.apply( undefined, [ value ].slice( noValue ) );
- }
-
- // For Promises/A+, convert exceptions into rejections
- // Since jQuery.when doesn't unwrap thenables, we can skip the extra checks appearing in
- // Deferred#then to conditionally suppress rejection.
- } catch ( value ) {
-
- // Support: Android 4.0 only
- // Strict mode functions invoked without .call/.apply get global-object context
- reject.apply( undefined, [ value ] );
- }
-}
-
-jQuery.extend( {
-
- Deferred: function( func ) {
- var tuples = [
-
- // action, add listener, callbacks,
- // ... .then handlers, argument index, [final state]
- [ "notify", "progress", jQuery.Callbacks( "memory" ),
- jQuery.Callbacks( "memory" ), 2 ],
- [ "resolve", "done", jQuery.Callbacks( "once memory" ),
- jQuery.Callbacks( "once memory" ), 0, "resolved" ],
- [ "reject", "fail", jQuery.Callbacks( "once memory" ),
- jQuery.Callbacks( "once memory" ), 1, "rejected" ]
- ],
- state = "pending",
- promise = {
- state: function() {
- return state;
- },
- always: function() {
- deferred.done( arguments ).fail( arguments );
- return this;
- },
- "catch": function( fn ) {
- return promise.then( null, fn );
- },
-
- // Keep pipe for back-compat
- pipe: function( /* fnDone, fnFail, fnProgress */ ) {
- var fns = arguments;
-
- return jQuery.Deferred( function( newDefer ) {
- jQuery.each( tuples, function( i, tuple ) {
-
- // Map tuples (progress, done, fail) to arguments (done, fail, progress)
- var fn = jQuery.isFunction( fns[ tuple[ 4 ] ] ) && fns[ tuple[ 4 ] ];
-
- // deferred.progress(function() { bind to newDefer or newDefer.notify })
- // deferred.done(function() { bind to newDefer or newDefer.resolve })
- // deferred.fail(function() { bind to newDefer or newDefer.reject })
- deferred[ tuple[ 1 ] ]( function() {
- var returned = fn && fn.apply( this, arguments );
- if ( returned && jQuery.isFunction( returned.promise ) ) {
- returned.promise()
- .progress( newDefer.notify )
- .done( newDefer.resolve )
- .fail( newDefer.reject );
- } else {
- newDefer[ tuple[ 0 ] + "With" ](
- this,
- fn ? [ returned ] : arguments
- );
- }
- } );
- } );
- fns = null;
- } ).promise();
- },
- then: function( onFulfilled, onRejected, onProgress ) {
- var maxDepth = 0;
- function resolve( depth, deferred, handler, special ) {
- return function() {
- var that = this,
- args = arguments,
- mightThrow = function() {
- var returned, then;
-
- // Support: Promises/A+ section 2.3.3.3.3
- // https://promisesaplus.com/#point-59
- // Ignore double-resolution attempts
- if ( depth < maxDepth ) {
- return;
- }
-
- returned = handler.apply( that, args );
-
- // Support: Promises/A+ section 2.3.1
- // https://promisesaplus.com/#point-48
- if ( returned === deferred.promise() ) {
- throw new TypeError( "Thenable self-resolution" );
- }
-
- // Support: Promises/A+ sections 2.3.3.1, 3.5
- // https://promisesaplus.com/#point-54
- // https://promisesaplus.com/#point-75
- // Retrieve `then` only once
- then = returned &&
-
- // Support: Promises/A+ section 2.3.4
- // https://promisesaplus.com/#point-64
- // Only check objects and functions for thenability
- ( typeof returned === "object" ||
- typeof returned === "function" ) &&
- returned.then;
-
- // Handle a returned thenable
- if ( jQuery.isFunction( then ) ) {
-
- // Special processors (notify) just wait for resolution
- if ( special ) {
- then.call(
- returned,
- resolve( maxDepth, deferred, Identity, special ),
- resolve( maxDepth, deferred, Thrower, special )
- );
-
- // Normal processors (resolve) also hook into progress
- } else {
-
- // ...and disregard older resolution values
- maxDepth++;
-
- then.call(
- returned,
- resolve( maxDepth, deferred, Identity, special ),
- resolve( maxDepth, deferred, Thrower, special ),
- resolve( maxDepth, deferred, Identity,
- deferred.notifyWith )
- );
- }
-
- // Handle all other returned values
- } else {
-
- // Only substitute handlers pass on context
- // and multiple values (non-spec behavior)
- if ( handler !== Identity ) {
- that = undefined;
- args = [ returned ];
- }
-
- // Process the value(s)
- // Default process is resolve
- ( special || deferred.resolveWith )( that, args );
- }
- },
-
- // Only normal processors (resolve) catch and reject exceptions
- process = special ?
- mightThrow :
- function() {
- try {
- mightThrow();
- } catch ( e ) {
-
- if ( jQuery.Deferred.exceptionHook ) {
- jQuery.Deferred.exceptionHook( e,
- process.stackTrace );
- }
-
- // Support: Promises/A+ section 2.3.3.3.4.1
- // https://promisesaplus.com/#point-61
- // Ignore post-resolution exceptions
- if ( depth + 1 >= maxDepth ) {
-
- // Only substitute handlers pass on context
- // and multiple values (non-spec behavior)
- if ( handler !== Thrower ) {
- that = undefined;
- args = [ e ];
- }
-
- deferred.rejectWith( that, args );
- }
- }
- };
-
- // Support: Promises/A+ section 2.3.3.3.1
- // https://promisesaplus.com/#point-57
- // Re-resolve promises immediately to dodge false rejection from
- // subsequent errors
- if ( depth ) {
- process();
- } else {
-
- // Call an optional hook to record the stack, in case of exception
- // since it's otherwise lost when execution goes async
- if ( jQuery.Deferred.getStackHook ) {
- process.stackTrace = jQuery.Deferred.getStackHook();
- }
- window.setTimeout( process );
- }
- };
- }
-
- return jQuery.Deferred( function( newDefer ) {
-
- // progress_handlers.add( ... )
- tuples[ 0 ][ 3 ].add(
- resolve(
- 0,
- newDefer,
- jQuery.isFunction( onProgress ) ?
- onProgress :
- Identity,
- newDefer.notifyWith
- )
- );
-
- // fulfilled_handlers.add( ... )
- tuples[ 1 ][ 3 ].add(
- resolve(
- 0,
- newDefer,
- jQuery.isFunction( onFulfilled ) ?
- onFulfilled :
- Identity
- )
- );
-
- // rejected_handlers.add( ... )
- tuples[ 2 ][ 3 ].add(
- resolve(
- 0,
- newDefer,
- jQuery.isFunction( onRejected ) ?
- onRejected :
- Thrower
- )
- );
- } ).promise();
- },
-
- // Get a promise for this deferred
- // If obj is provided, the promise aspect is added to the object
- promise: function( obj ) {
- return obj != null ? jQuery.extend( obj, promise ) : promise;
- }
- },
- deferred = {};
-
- // Add list-specific methods
- jQuery.each( tuples, function( i, tuple ) {
- var list = tuple[ 2 ],
- stateString = tuple[ 5 ];
-
- // promise.progress = list.add
- // promise.done = list.add
- // promise.fail = list.add
- promise[ tuple[ 1 ] ] = list.add;
-
- // Handle state
- if ( stateString ) {
- list.add(
- function() {
-
- // state = "resolved" (i.e., fulfilled)
- // state = "rejected"
- state = stateString;
- },
-
- // rejected_callbacks.disable
- // fulfilled_callbacks.disable
- tuples[ 3 - i ][ 2 ].disable,
-
- // progress_callbacks.lock
- tuples[ 0 ][ 2 ].lock
- );
- }
-
- // progress_handlers.fire
- // fulfilled_handlers.fire
- // rejected_handlers.fire
- list.add( tuple[ 3 ].fire );
-
- // deferred.notify = function() { deferred.notifyWith(...) }
- // deferred.resolve = function() { deferred.resolveWith(...) }
- // deferred.reject = function() { deferred.rejectWith(...) }
- deferred[ tuple[ 0 ] ] = function() {
- deferred[ tuple[ 0 ] + "With" ]( this === deferred ? undefined : this, arguments );
- return this;
- };
-
- // deferred.notifyWith = list.fireWith
- // deferred.resolveWith = list.fireWith
- // deferred.rejectWith = list.fireWith
- deferred[ tuple[ 0 ] + "With" ] = list.fireWith;
- } );
-
- // Make the deferred a promise
- promise.promise( deferred );
-
- // Call given func if any
- if ( func ) {
- func.call( deferred, deferred );
- }
-
- // All done!
- return deferred;
- },
-
- // Deferred helper
- when: function( singleValue ) {
- var
-
- // count of uncompleted subordinates
- remaining = arguments.length,
-
- // count of unprocessed arguments
- i = remaining,
-
- // subordinate fulfillment data
- resolveContexts = Array( i ),
- resolveValues = slice.call( arguments ),
-
- // the master Deferred
- master = jQuery.Deferred(),
-
- // subordinate callback factory
- updateFunc = function( i ) {
- return function( value ) {
- resolveContexts[ i ] = this;
- resolveValues[ i ] = arguments.length > 1 ? slice.call( arguments ) : value;
- if ( !( --remaining ) ) {
- master.resolveWith( resolveContexts, resolveValues );
- }
- };
- };
-
- // Single- and empty arguments are adopted like Promise.resolve
- if ( remaining <= 1 ) {
- adoptValue( singleValue, master.done( updateFunc( i ) ).resolve, master.reject,
- !remaining );
-
- // Use .then() to unwrap secondary thenables (cf. gh-3000)
- if ( master.state() === "pending" ||
- jQuery.isFunction( resolveValues[ i ] && resolveValues[ i ].then ) ) {
-
- return master.then();
- }
- }
-
- // Multiple arguments are aggregated like Promise.all array elements
- while ( i-- ) {
- adoptValue( resolveValues[ i ], updateFunc( i ), master.reject );
- }
-
- return master.promise();
- }
-} );
-
-
-// These usually indicate a programmer mistake during development,
-// warn about them ASAP rather than swallowing them by default.
-var rerrorNames = /^(Eval|Internal|Range|Reference|Syntax|Type|URI)Error$/;
-
-jQuery.Deferred.exceptionHook = function( error, stack ) {
-
- // Support: IE 8 - 9 only
- // Console exists when dev tools are open, which can happen at any time
- if ( window.console && window.console.warn && error && rerrorNames.test( error.name ) ) {
- window.console.warn( "jQuery.Deferred exception: " + error.message, error.stack, stack );
- }
-};
-
-
-
-
-jQuery.readyException = function( error ) {
- window.setTimeout( function() {
- throw error;
- } );
-};
-
-
-
-
-// The deferred used on DOM ready
-var readyList = jQuery.Deferred();
-
-jQuery.fn.ready = function( fn ) {
-
- readyList
- .then( fn )
-
- // Wrap jQuery.readyException in a function so that the lookup
- // happens at the time of error handling instead of callback
- // registration.
- .catch( function( error ) {
- jQuery.readyException( error );
- } );
-
- return this;
-};
-
-jQuery.extend( {
-
- // Is the DOM ready to be used? Set to true once it occurs.
- isReady: false,
-
- // A counter to track how many items to wait for before
- // the ready event fires. See #6781
- readyWait: 1,
-
- // Handle when the DOM is ready
- ready: function( wait ) {
-
- // Abort if there are pending holds or we're already ready
- if ( wait === true ? --jQuery.readyWait : jQuery.isReady ) {
- return;
- }
-
- // Remember that the DOM is ready
- jQuery.isReady = true;
-
- // If a normal DOM Ready event fired, decrement, and wait if need be
- if ( wait !== true && --jQuery.readyWait > 0 ) {
- return;
- }
-
- // If there are functions bound, to execute
- readyList.resolveWith( document, [ jQuery ] );
- }
-} );
-
-jQuery.ready.then = readyList.then;
-
-// The ready event handler and self cleanup method
-function completed() {
- document.removeEventListener( "DOMContentLoaded", completed );
- window.removeEventListener( "load", completed );
- jQuery.ready();
-}
-
-// Catch cases where $(document).ready() is called
-// after the browser event has already occurred.
-// Support: IE <=9 - 10 only
-// Older IE sometimes signals "interactive" too soon
-if ( document.readyState === "complete" ||
- ( document.readyState !== "loading" && !document.documentElement.doScroll ) ) {
-
- // Handle it asynchronously to allow scripts the opportunity to delay ready
- window.setTimeout( jQuery.ready );
-
-} else {
-
- // Use the handy event callback
- document.addEventListener( "DOMContentLoaded", completed );
-
- // A fallback to window.onload, that will always work
- window.addEventListener( "load", completed );
-}
-
-
-
-
-// Multifunctional method to get and set values of a collection
-// The value/s can optionally be executed if it's a function
-var access = function( elems, fn, key, value, chainable, emptyGet, raw ) {
- var i = 0,
- len = elems.length,
- bulk = key == null;
-
- // Sets many values
- if ( jQuery.type( key ) === "object" ) {
- chainable = true;
- for ( i in key ) {
- access( elems, fn, i, key[ i ], true, emptyGet, raw );
- }
-
- // Sets one value
- } else if ( value !== undefined ) {
- chainable = true;
-
- if ( !jQuery.isFunction( value ) ) {
- raw = true;
- }
-
- if ( bulk ) {
-
- // Bulk operations run against the entire set
- if ( raw ) {
- fn.call( elems, value );
- fn = null;
-
- // ...except when executing function values
- } else {
- bulk = fn;
- fn = function( elem, key, value ) {
- return bulk.call( jQuery( elem ), value );
- };
- }
- }
-
- if ( fn ) {
- for ( ; i < len; i++ ) {
- fn(
- elems[ i ], key, raw ?
- value :
- value.call( elems[ i ], i, fn( elems[ i ], key ) )
- );
- }
- }
- }
-
- if ( chainable ) {
- return elems;
- }
-
- // Gets
- if ( bulk ) {
- return fn.call( elems );
- }
-
- return len ? fn( elems[ 0 ], key ) : emptyGet;
-};
-var acceptData = function( owner ) {
-
- // Accepts only:
- // - Node
- // - Node.ELEMENT_NODE
- // - Node.DOCUMENT_NODE
- // - Object
- // - Any
- return owner.nodeType === 1 || owner.nodeType === 9 || !( +owner.nodeType );
-};
-
-
-
-
-function Data() {
- this.expando = jQuery.expando + Data.uid++;
-}
-
-Data.uid = 1;
-
-Data.prototype = {
-
- cache: function( owner ) {
-
- // Check if the owner object already has a cache
- var value = owner[ this.expando ];
-
- // If not, create one
- if ( !value ) {
- value = {};
-
- // We can accept data for non-element nodes in modern browsers,
- // but we should not, see #8335.
- // Always return an empty object.
- if ( acceptData( owner ) ) {
-
- // If it is a node unlikely to be stringify-ed or looped over
- // use plain assignment
- if ( owner.nodeType ) {
- owner[ this.expando ] = value;
-
- // Otherwise secure it in a non-enumerable property
- // configurable must be true to allow the property to be
- // deleted when data is removed
- } else {
- Object.defineProperty( owner, this.expando, {
- value: value,
- configurable: true
- } );
- }
- }
- }
-
- return value;
- },
- set: function( owner, data, value ) {
- var prop,
- cache = this.cache( owner );
-
- // Handle: [ owner, key, value ] args
- // Always use camelCase key (gh-2257)
- if ( typeof data === "string" ) {
- cache[ jQuery.camelCase( data ) ] = value;
-
- // Handle: [ owner, { properties } ] args
- } else {
-
- // Copy the properties one-by-one to the cache object
- for ( prop in data ) {
- cache[ jQuery.camelCase( prop ) ] = data[ prop ];
- }
- }
- return cache;
- },
- get: function( owner, key ) {
- return key === undefined ?
- this.cache( owner ) :
-
- // Always use camelCase key (gh-2257)
- owner[ this.expando ] && owner[ this.expando ][ jQuery.camelCase( key ) ];
- },
- access: function( owner, key, value ) {
-
- // In cases where either:
- //
- // 1. No key was specified
- // 2. A string key was specified, but no value provided
- //
- // Take the "read" path and allow the get method to determine
- // which value to return, respectively either:
- //
- // 1. The entire cache object
- // 2. The data stored at the key
- //
- if ( key === undefined ||
- ( ( key && typeof key === "string" ) && value === undefined ) ) {
-
- return this.get( owner, key );
- }
-
- // When the key is not a string, or both a key and value
- // are specified, set or extend (existing objects) with either:
- //
- // 1. An object of properties
- // 2. A key and value
- //
- this.set( owner, key, value );
-
- // Since the "set" path can have two possible entry points
- // return the expected data based on which path was taken[*]
- return value !== undefined ? value : key;
- },
- remove: function( owner, key ) {
- var i,
- cache = owner[ this.expando ];
-
- if ( cache === undefined ) {
- return;
- }
-
- if ( key !== undefined ) {
-
- // Support array or space separated string of keys
- if ( Array.isArray( key ) ) {
-
- // If key is an array of keys...
- // We always set camelCase keys, so remove that.
- key = key.map( jQuery.camelCase );
- } else {
- key = jQuery.camelCase( key );
-
- // If a key with the spaces exists, use it.
- // Otherwise, create an array by matching non-whitespace
- key = key in cache ?
- [ key ] :
- ( key.match( rnothtmlwhite ) || [] );
- }
-
- i = key.length;
-
- while ( i-- ) {
- delete cache[ key[ i ] ];
- }
- }
-
- // Remove the expando if there's no more data
- if ( key === undefined || jQuery.isEmptyObject( cache ) ) {
-
- // Support: Chrome <=35 - 45
- // Webkit & Blink performance suffers when deleting properties
- // from DOM nodes, so set to undefined instead
- // https://bugs.chromium.org/p/chromium/issues/detail?id=378607 (bug restricted)
- if ( owner.nodeType ) {
- owner[ this.expando ] = undefined;
- } else {
- delete owner[ this.expando ];
- }
- }
- },
- hasData: function( owner ) {
- var cache = owner[ this.expando ];
- return cache !== undefined && !jQuery.isEmptyObject( cache );
- }
-};
-var dataPriv = new Data();
-
-var dataUser = new Data();
-
-
-
-// Implementation Summary
-//
-// 1. Enforce API surface and semantic compatibility with 1.9.x branch
-// 2. Improve the module's maintainability by reducing the storage
-// paths to a single mechanism.
-// 3. Use the same single mechanism to support "private" and "user" data.
-// 4. _Never_ expose "private" data to user code (TODO: Drop _data, _removeData)
-// 5. Avoid exposing implementation details on user objects (eg. expando properties)
-// 6. Provide a clear path for implementation upgrade to WeakMap in 2014
-
-var rbrace = /^(?:\{[\w\W]*\}|\[[\w\W]*\])$/,
- rmultiDash = /[A-Z]/g;
-
-function getData( data ) {
- if ( data === "true" ) {
- return true;
- }
-
- if ( data === "false" ) {
- return false;
- }
-
- if ( data === "null" ) {
- return null;
- }
-
- // Only convert to a number if it doesn't change the string
- if ( data === +data + "" ) {
- return +data;
- }
-
- if ( rbrace.test( data ) ) {
- return JSON.parse( data );
- }
-
- return data;
-}
-
-function dataAttr( elem, key, data ) {
- var name;
-
- // If nothing was found internally, try to fetch any
- // data from the HTML5 data-* attribute
- if ( data === undefined && elem.nodeType === 1 ) {
- name = "data-" + key.replace( rmultiDash, "-$&" ).toLowerCase();
- data = elem.getAttribute( name );
-
- if ( typeof data === "string" ) {
- try {
- data = getData( data );
- } catch ( e ) {}
-
- // Make sure we set the data so it isn't changed later
- dataUser.set( elem, key, data );
- } else {
- data = undefined;
- }
- }
- return data;
-}
-
-jQuery.extend( {
- hasData: function( elem ) {
- return dataUser.hasData( elem ) || dataPriv.hasData( elem );
- },
-
- data: function( elem, name, data ) {
- return dataUser.access( elem, name, data );
- },
-
- removeData: function( elem, name ) {
- dataUser.remove( elem, name );
- },
-
- // TODO: Now that all calls to _data and _removeData have been replaced
- // with direct calls to dataPriv methods, these can be deprecated.
- _data: function( elem, name, data ) {
- return dataPriv.access( elem, name, data );
- },
-
- _removeData: function( elem, name ) {
- dataPriv.remove( elem, name );
- }
-} );
-
-jQuery.fn.extend( {
- data: function( key, value ) {
- var i, name, data,
- elem = this[ 0 ],
- attrs = elem && elem.attributes;
-
- // Gets all values
- if ( key === undefined ) {
- if ( this.length ) {
- data = dataUser.get( elem );
-
- if ( elem.nodeType === 1 && !dataPriv.get( elem, "hasDataAttrs" ) ) {
- i = attrs.length;
- while ( i-- ) {
-
- // Support: IE 11 only
- // The attrs elements can be null (#14894)
- if ( attrs[ i ] ) {
- name = attrs[ i ].name;
- if ( name.indexOf( "data-" ) === 0 ) {
- name = jQuery.camelCase( name.slice( 5 ) );
- dataAttr( elem, name, data[ name ] );
- }
- }
- }
- dataPriv.set( elem, "hasDataAttrs", true );
- }
- }
-
- return data;
- }
-
- // Sets multiple values
- if ( typeof key === "object" ) {
- return this.each( function() {
- dataUser.set( this, key );
- } );
- }
-
- return access( this, function( value ) {
- var data;
-
- // The calling jQuery object (element matches) is not empty
- // (and therefore has an element appears at this[ 0 ]) and the
- // `value` parameter was not undefined. An empty jQuery object
- // will result in `undefined` for elem = this[ 0 ] which will
- // throw an exception if an attempt to read a data cache is made.
- if ( elem && value === undefined ) {
-
- // Attempt to get data from the cache
- // The key will always be camelCased in Data
- data = dataUser.get( elem, key );
- if ( data !== undefined ) {
- return data;
- }
-
- // Attempt to "discover" the data in
- // HTML5 custom data-* attrs
- data = dataAttr( elem, key );
- if ( data !== undefined ) {
- return data;
- }
-
- // We tried really hard, but the data doesn't exist.
- return;
- }
-
- // Set the data...
- this.each( function() {
-
- // We always store the camelCased key
- dataUser.set( this, key, value );
- } );
- }, null, value, arguments.length > 1, null, true );
- },
-
- removeData: function( key ) {
- return this.each( function() {
- dataUser.remove( this, key );
- } );
- }
-} );
-
-
-jQuery.extend( {
- queue: function( elem, type, data ) {
- var queue;
-
- if ( elem ) {
- type = ( type || "fx" ) + "queue";
- queue = dataPriv.get( elem, type );
-
- // Speed up dequeue by getting out quickly if this is just a lookup
- if ( data ) {
- if ( !queue || Array.isArray( data ) ) {
- queue = dataPriv.access( elem, type, jQuery.makeArray( data ) );
- } else {
- queue.push( data );
- }
- }
- return queue || [];
- }
- },
-
- dequeue: function( elem, type ) {
- type = type || "fx";
-
- var queue = jQuery.queue( elem, type ),
- startLength = queue.length,
- fn = queue.shift(),
- hooks = jQuery._queueHooks( elem, type ),
- next = function() {
- jQuery.dequeue( elem, type );
- };
-
- // If the fx queue is dequeued, always remove the progress sentinel
- if ( fn === "inprogress" ) {
- fn = queue.shift();
- startLength--;
- }
-
- if ( fn ) {
-
- // Add a progress sentinel to prevent the fx queue from being
- // automatically dequeued
- if ( type === "fx" ) {
- queue.unshift( "inprogress" );
- }
-
- // Clear up the last queue stop function
- delete hooks.stop;
- fn.call( elem, next, hooks );
- }
-
- if ( !startLength && hooks ) {
- hooks.empty.fire();
- }
- },
-
- // Not public - generate a queueHooks object, or return the current one
- _queueHooks: function( elem, type ) {
- var key = type + "queueHooks";
- return dataPriv.get( elem, key ) || dataPriv.access( elem, key, {
- empty: jQuery.Callbacks( "once memory" ).add( function() {
- dataPriv.remove( elem, [ type + "queue", key ] );
- } )
- } );
- }
-} );
-
-jQuery.fn.extend( {
- queue: function( type, data ) {
- var setter = 2;
-
- if ( typeof type !== "string" ) {
- data = type;
- type = "fx";
- setter--;
- }
-
- if ( arguments.length < setter ) {
- return jQuery.queue( this[ 0 ], type );
- }
-
- return data === undefined ?
- this :
- this.each( function() {
- var queue = jQuery.queue( this, type, data );
-
- // Ensure a hooks for this queue
- jQuery._queueHooks( this, type );
-
- if ( type === "fx" && queue[ 0 ] !== "inprogress" ) {
- jQuery.dequeue( this, type );
- }
- } );
- },
- dequeue: function( type ) {
- return this.each( function() {
- jQuery.dequeue( this, type );
- } );
- },
- clearQueue: function( type ) {
- return this.queue( type || "fx", [] );
- },
-
- // Get a promise resolved when queues of a certain type
- // are emptied (fx is the type by default)
- promise: function( type, obj ) {
- var tmp,
- count = 1,
- defer = jQuery.Deferred(),
- elements = this,
- i = this.length,
- resolve = function() {
- if ( !( --count ) ) {
- defer.resolveWith( elements, [ elements ] );
- }
- };
-
- if ( typeof type !== "string" ) {
- obj = type;
- type = undefined;
- }
- type = type || "fx";
-
- while ( i-- ) {
- tmp = dataPriv.get( elements[ i ], type + "queueHooks" );
- if ( tmp && tmp.empty ) {
- count++;
- tmp.empty.add( resolve );
- }
- }
- resolve();
- return defer.promise( obj );
- }
-} );
-var pnum = ( /[+-]?(?:\d*\.|)\d+(?:[eE][+-]?\d+|)/ ).source;
-
-var rcssNum = new RegExp( "^(?:([+-])=|)(" + pnum + ")([a-z%]*)$", "i" );
-
-
-var cssExpand = [ "Top", "Right", "Bottom", "Left" ];
-
-var isHiddenWithinTree = function( elem, el ) {
-
- // isHiddenWithinTree might be called from jQuery#filter function;
- // in that case, element will be second argument
- elem = el || elem;
-
- // Inline style trumps all
- return elem.style.display === "none" ||
- elem.style.display === "" &&
-
- // Otherwise, check computed style
- // Support: Firefox <=43 - 45
- // Disconnected elements can have computed display: none, so first confirm that elem is
- // in the document.
- jQuery.contains( elem.ownerDocument, elem ) &&
-
- jQuery.css( elem, "display" ) === "none";
- };
-
-var swap = function( elem, options, callback, args ) {
- var ret, name,
- old = {};
-
- // Remember the old values, and insert the new ones
- for ( name in options ) {
- old[ name ] = elem.style[ name ];
- elem.style[ name ] = options[ name ];
- }
-
- ret = callback.apply( elem, args || [] );
-
- // Revert the old values
- for ( name in options ) {
- elem.style[ name ] = old[ name ];
- }
-
- return ret;
-};
-
-
-
-
-function adjustCSS( elem, prop, valueParts, tween ) {
- var adjusted,
- scale = 1,
- maxIterations = 20,
- currentValue = tween ?
- function() {
- return tween.cur();
- } :
- function() {
- return jQuery.css( elem, prop, "" );
- },
- initial = currentValue(),
- unit = valueParts && valueParts[ 3 ] || ( jQuery.cssNumber[ prop ] ? "" : "px" ),
-
- // Starting value computation is required for potential unit mismatches
- initialInUnit = ( jQuery.cssNumber[ prop ] || unit !== "px" && +initial ) &&
- rcssNum.exec( jQuery.css( elem, prop ) );
-
- if ( initialInUnit && initialInUnit[ 3 ] !== unit ) {
-
- // Trust units reported by jQuery.css
- unit = unit || initialInUnit[ 3 ];
-
- // Make sure we update the tween properties later on
- valueParts = valueParts || [];
-
- // Iteratively approximate from a nonzero starting point
- initialInUnit = +initial || 1;
-
- do {
-
- // If previous iteration zeroed out, double until we get *something*.
- // Use string for doubling so we don't accidentally see scale as unchanged below
- scale = scale || ".5";
-
- // Adjust and apply
- initialInUnit = initialInUnit / scale;
- jQuery.style( elem, prop, initialInUnit + unit );
-
- // Update scale, tolerating zero or NaN from tween.cur()
- // Break the loop if scale is unchanged or perfect, or if we've just had enough.
- } while (
- scale !== ( scale = currentValue() / initial ) && scale !== 1 && --maxIterations
- );
- }
-
- if ( valueParts ) {
- initialInUnit = +initialInUnit || +initial || 0;
-
- // Apply relative offset (+=/-=) if specified
- adjusted = valueParts[ 1 ] ?
- initialInUnit + ( valueParts[ 1 ] + 1 ) * valueParts[ 2 ] :
- +valueParts[ 2 ];
- if ( tween ) {
- tween.unit = unit;
- tween.start = initialInUnit;
- tween.end = adjusted;
- }
- }
- return adjusted;
-}
-
-
-var defaultDisplayMap = {};
-
-function getDefaultDisplay( elem ) {
- var temp,
- doc = elem.ownerDocument,
- nodeName = elem.nodeName,
- display = defaultDisplayMap[ nodeName ];
-
- if ( display ) {
- return display;
- }
-
- temp = doc.body.appendChild( doc.createElement( nodeName ) );
- display = jQuery.css( temp, "display" );
-
- temp.parentNode.removeChild( temp );
-
- if ( display === "none" ) {
- display = "block";
- }
- defaultDisplayMap[ nodeName ] = display;
-
- return display;
-}
-
-function showHide( elements, show ) {
- var display, elem,
- values = [],
- index = 0,
- length = elements.length;
-
- // Determine new display value for elements that need to change
- for ( ; index < length; index++ ) {
- elem = elements[ index ];
- if ( !elem.style ) {
- continue;
- }
-
- display = elem.style.display;
- if ( show ) {
-
- // Since we force visibility upon cascade-hidden elements, an immediate (and slow)
- // check is required in this first loop unless we have a nonempty display value (either
- // inline or about-to-be-restored)
- if ( display === "none" ) {
- values[ index ] = dataPriv.get( elem, "display" ) || null;
- if ( !values[ index ] ) {
- elem.style.display = "";
- }
- }
- if ( elem.style.display === "" && isHiddenWithinTree( elem ) ) {
- values[ index ] = getDefaultDisplay( elem );
- }
- } else {
- if ( display !== "none" ) {
- values[ index ] = "none";
-
- // Remember what we're overwriting
- dataPriv.set( elem, "display", display );
- }
- }
- }
-
- // Set the display of the elements in a second loop to avoid constant reflow
- for ( index = 0; index < length; index++ ) {
- if ( values[ index ] != null ) {
- elements[ index ].style.display = values[ index ];
- }
- }
-
- return elements;
-}
-
-jQuery.fn.extend( {
- show: function() {
- return showHide( this, true );
- },
- hide: function() {
- return showHide( this );
- },
- toggle: function( state ) {
- if ( typeof state === "boolean" ) {
- return state ? this.show() : this.hide();
- }
-
- return this.each( function() {
- if ( isHiddenWithinTree( this ) ) {
- jQuery( this ).show();
- } else {
- jQuery( this ).hide();
- }
- } );
- }
-} );
-var rcheckableType = ( /^(?:checkbox|radio)$/i );
-
-var rtagName = ( /<([a-z][^\/\0>\x20\t\r\n\f]+)/i );
-
-var rscriptType = ( /^$|\/(?:java|ecma)script/i );
-
-
-
-// We have to close these tags to support XHTML (#13200)
-var wrapMap = {
-
- // Support: IE <=9 only
- option: [ 1, "<select multiple='multiple'>", "</select>" ],
-
- // XHTML parsers do not magically insert elements in the
- // same way that tag soup parsers do. So we cannot shorten
- // this by omitting <tbody> or other required elements.
- thead: [ 1, "<table>", "</table>" ],
- col: [ 2, "<table><colgroup>", "</colgroup></table>" ],
- tr: [ 2, "<table><tbody>", "</tbody></table>" ],
- td: [ 3, "<table><tbody><tr>", "</tr></tbody></table>" ],
-
- _default: [ 0, "", "" ]
-};
-
-// Support: IE <=9 only
-wrapMap.optgroup = wrapMap.option;
-
-wrapMap.tbody = wrapMap.tfoot = wrapMap.colgroup = wrapMap.caption = wrapMap.thead;
-wrapMap.th = wrapMap.td;
-
-
-function getAll( context, tag ) {
-
- // Support: IE <=9 - 11 only
- // Use typeof to avoid zero-argument method invocation on host objects (#15151)
- var ret;
-
- if ( typeof context.getElementsByTagName !== "undefined" ) {
- ret = context.getElementsByTagName( tag || "*" );
-
- } else if ( typeof context.querySelectorAll !== "undefined" ) {
- ret = context.querySelectorAll( tag || "*" );
-
- } else {
- ret = [];
- }
-
- if ( tag === undefined || tag && nodeName( context, tag ) ) {
- return jQuery.merge( [ context ], ret );
- }
-
- return ret;
-}
-
-
-// Mark scripts as having already been evaluated
-function setGlobalEval( elems, refElements ) {
- var i = 0,
- l = elems.length;
-
- for ( ; i < l; i++ ) {
- dataPriv.set(
- elems[ i ],
- "globalEval",
- !refElements || dataPriv.get( refElements[ i ], "globalEval" )
- );
- }
-}
-
-
-var rhtml = /<|&#?\w+;/;
-
-function buildFragment( elems, context, scripts, selection, ignored ) {
- var elem, tmp, tag, wrap, contains, j,
- fragment = context.createDocumentFragment(),
- nodes = [],
- i = 0,
- l = elems.length;
-
- for ( ; i < l; i++ ) {
- elem = elems[ i ];
-
- if ( elem || elem === 0 ) {
-
- // Add nodes directly
- if ( jQuery.type( elem ) === "object" ) {
-
- // Support: Android <=4.0 only, PhantomJS 1 only
- // push.apply(_, arraylike) throws on ancient WebKit
- jQuery.merge( nodes, elem.nodeType ? [ elem ] : elem );
-
- // Convert non-html into a text node
- } else if ( !rhtml.test( elem ) ) {
- nodes.push( context.createTextNode( elem ) );
-
- // Convert html into DOM nodes
- } else {
- tmp = tmp || fragment.appendChild( context.createElement( "div" ) );
-
- // Deserialize a standard representation
- tag = ( rtagName.exec( elem ) || [ "", "" ] )[ 1 ].toLowerCase();
- wrap = wrapMap[ tag ] || wrapMap._default;
- tmp.innerHTML = wrap[ 1 ] + jQuery.htmlPrefilter( elem ) + wrap[ 2 ];
-
- // Descend through wrappers to the right content
- j = wrap[ 0 ];
- while ( j-- ) {
- tmp = tmp.lastChild;
- }
-
- // Support: Android <=4.0 only, PhantomJS 1 only
- // push.apply(_, arraylike) throws on ancient WebKit
- jQuery.merge( nodes, tmp.childNodes );
-
- // Remember the top-level container
- tmp = fragment.firstChild;
-
- // Ensure the created nodes are orphaned (#12392)
- tmp.textContent = "";
- }
- }
- }
-
- // Remove wrapper from fragment
- fragment.textContent = "";
-
- i = 0;
- while ( ( elem = nodes[ i++ ] ) ) {
-
- // Skip elements already in the context collection (trac-4087)
- if ( selection && jQuery.inArray( elem, selection ) > -1 ) {
- if ( ignored ) {
- ignored.push( elem );
- }
- continue;
- }
-
- contains = jQuery.contains( elem.ownerDocument, elem );
-
- // Append to fragment
- tmp = getAll( fragment.appendChild( elem ), "script" );
-
- // Preserve script evaluation history
- if ( contains ) {
- setGlobalEval( tmp );
- }
-
- // Capture executables
- if ( scripts ) {
- j = 0;
- while ( ( elem = tmp[ j++ ] ) ) {
- if ( rscriptType.test( elem.type || "" ) ) {
- scripts.push( elem );
- }
- }
- }
- }
-
- return fragment;
-}
-
-
-( function() {
- var fragment = document.createDocumentFragment(),
- div = fragment.appendChild( document.createElement( "div" ) ),
- input = document.createElement( "input" );
-
- // Support: Android 4.0 - 4.3 only
- // Check state lost if the name is set (#11217)
- // Support: Windows Web Apps (WWA)
- // `name` and `type` must use .setAttribute for WWA (#14901)
- input.setAttribute( "type", "radio" );
- input.setAttribute( "checked", "checked" );
- input.setAttribute( "name", "t" );
-
- div.appendChild( input );
-
- // Support: Android <=4.1 only
- // Older WebKit doesn't clone checked state correctly in fragments
- support.checkClone = div.cloneNode( true ).cloneNode( true ).lastChild.checked;
-
- // Support: IE <=11 only
- // Make sure textarea (and checkbox) defaultValue is properly cloned
- div.innerHTML = "<textarea>x</textarea>";
- support.noCloneChecked = !!div.cloneNode( true ).lastChild.defaultValue;
-} )();
-var documentElement = document.documentElement;
-
-
-
-var
- rkeyEvent = /^key/,
- rmouseEvent = /^(?:mouse|pointer|contextmenu|drag|drop)|click/,
- rtypenamespace = /^([^.]*)(?:\.(.+)|)/;
-
-function returnTrue() {
- return true;
-}
-
-function returnFalse() {
- return false;
-}
-
-// Support: IE <=9 only
-// See #13393 for more info
-function safeActiveElement() {
- try {
- return document.activeElement;
- } catch ( err ) { }
-}
-
-function on( elem, types, selector, data, fn, one ) {
- var origFn, type;
-
- // Types can be a map of types/handlers
- if ( typeof types === "object" ) {
-
- // ( types-Object, selector, data )
- if ( typeof selector !== "string" ) {
-
- // ( types-Object, data )
- data = data || selector;
- selector = undefined;
- }
- for ( type in types ) {
- on( elem, type, selector, data, types[ type ], one );
- }
- return elem;
- }
-
- if ( data == null && fn == null ) {
-
- // ( types, fn )
- fn = selector;
- data = selector = undefined;
- } else if ( fn == null ) {
- if ( typeof selector === "string" ) {
-
- // ( types, selector, fn )
- fn = data;
- data = undefined;
- } else {
-
- // ( types, data, fn )
- fn = data;
- data = selector;
- selector = undefined;
- }
- }
- if ( fn === false ) {
- fn = returnFalse;
- } else if ( !fn ) {
- return elem;
- }
-
- if ( one === 1 ) {
- origFn = fn;
- fn = function( event ) {
-
- // Can use an empty set, since event contains the info
- jQuery().off( event );
- return origFn.apply( this, arguments );
- };
-
- // Use same guid so caller can remove using origFn
- fn.guid = origFn.guid || ( origFn.guid = jQuery.guid++ );
- }
- return elem.each( function() {
- jQuery.event.add( this, types, fn, data, selector );
- } );
-}
-
-/*
- * Helper functions for managing events -- not part of the public interface.
- * Props to Dean Edwards' addEvent library for many of the ideas.
- */
-jQuery.event = {
-
- global: {},
-
- add: function( elem, types, handler, data, selector ) {
-
- var handleObjIn, eventHandle, tmp,
- events, t, handleObj,
- special, handlers, type, namespaces, origType,
- elemData = dataPriv.get( elem );
-
- // Don't attach events to noData or text/comment nodes (but allow plain objects)
- if ( !elemData ) {
- return;
- }
-
- // Caller can pass in an object of custom data in lieu of the handler
- if ( handler.handler ) {
- handleObjIn = handler;
- handler = handleObjIn.handler;
- selector = handleObjIn.selector;
- }
-
- // Ensure that invalid selectors throw exceptions at attach time
- // Evaluate against documentElement in case elem is a non-element node (e.g., document)
- if ( selector ) {
- jQuery.find.matchesSelector( documentElement, selector );
- }
-
- // Make sure that the handler has a unique ID, used to find/remove it later
- if ( !handler.guid ) {
- handler.guid = jQuery.guid++;
- }
-
- // Init the element's event structure and main handler, if this is the first
- if ( !( events = elemData.events ) ) {
- events = elemData.events = {};
- }
- if ( !( eventHandle = elemData.handle ) ) {
- eventHandle = elemData.handle = function( e ) {
-
- // Discard the second event of a jQuery.event.trigger() and
- // when an event is called after a page has unloaded
- return typeof jQuery !== "undefined" && jQuery.event.triggered !== e.type ?
- jQuery.event.dispatch.apply( elem, arguments ) : undefined;
- };
- }
-
- // Handle multiple events separated by a space
- types = ( types || "" ).match( rnothtmlwhite ) || [ "" ];
- t = types.length;
- while ( t-- ) {
- tmp = rtypenamespace.exec( types[ t ] ) || [];
- type = origType = tmp[ 1 ];
- namespaces = ( tmp[ 2 ] || "" ).split( "." ).sort();
-
- // There *must* be a type, no attaching namespace-only handlers
- if ( !type ) {
- continue;
- }
-
- // If event changes its type, use the special event handlers for the changed type
- special = jQuery.event.special[ type ] || {};
-
- // If selector defined, determine special event api type, otherwise given type
- type = ( selector ? special.delegateType : special.bindType ) || type;
-
- // Update special based on newly reset type
- special = jQuery.event.special[ type ] || {};
-
- // handleObj is passed to all event handlers
- handleObj = jQuery.extend( {
- type: type,
- origType: origType,
- data: data,
- handler: handler,
- guid: handler.guid,
- selector: selector,
- needsContext: selector && jQuery.expr.match.needsContext.test( selector ),
- namespace: namespaces.join( "." )
- }, handleObjIn );
-
- // Init the event handler queue if we're the first
- if ( !( handlers = events[ type ] ) ) {
- handlers = events[ type ] = [];
- handlers.delegateCount = 0;
-
- // Only use addEventListener if the special events handler returns false
- if ( !special.setup ||
- special.setup.call( elem, data, namespaces, eventHandle ) === false ) {
-
- if ( elem.addEventListener ) {
- elem.addEventListener( type, eventHandle );
- }
- }
- }
-
- if ( special.add ) {
- special.add.call( elem, handleObj );
-
- if ( !handleObj.handler.guid ) {
- handleObj.handler.guid = handler.guid;
- }
- }
-
- // Add to the element's handler list, delegates in front
- if ( selector ) {
- handlers.splice( handlers.delegateCount++, 0, handleObj );
- } else {
- handlers.push( handleObj );
- }
-
- // Keep track of which events have ever been used, for event optimization
- jQuery.event.global[ type ] = true;
- }
-
- },
-
- // Detach an event or set of events from an element
- remove: function( elem, types, handler, selector, mappedTypes ) {
-
- var j, origCount, tmp,
- events, t, handleObj,
- special, handlers, type, namespaces, origType,
- elemData = dataPriv.hasData( elem ) && dataPriv.get( elem );
-
- if ( !elemData || !( events = elemData.events ) ) {
- return;
- }
-
- // Once for each type.namespace in types; type may be omitted
- types = ( types || "" ).match( rnothtmlwhite ) || [ "" ];
- t = types.length;
- while ( t-- ) {
- tmp = rtypenamespace.exec( types[ t ] ) || [];
- type = origType = tmp[ 1 ];
- namespaces = ( tmp[ 2 ] || "" ).split( "." ).sort();
-
- // Unbind all events (on this namespace, if provided) for the element
- if ( !type ) {
- for ( type in events ) {
- jQuery.event.remove( elem, type + types[ t ], handler, selector, true );
- }
- continue;
- }
-
- special = jQuery.event.special[ type ] || {};
- type = ( selector ? special.delegateType : special.bindType ) || type;
- handlers = events[ type ] || [];
- tmp = tmp[ 2 ] &&
- new RegExp( "(^|\\.)" + namespaces.join( "\\.(?:.*\\.|)" ) + "(\\.|$)" );
-
- // Remove matching events
- origCount = j = handlers.length;
- while ( j-- ) {
- handleObj = handlers[ j ];
-
- if ( ( mappedTypes || origType === handleObj.origType ) &&
- ( !handler || handler.guid === handleObj.guid ) &&
- ( !tmp || tmp.test( handleObj.namespace ) ) &&
- ( !selector || selector === handleObj.selector ||
- selector === "**" && handleObj.selector ) ) {
- handlers.splice( j, 1 );
-
- if ( handleObj.selector ) {
- handlers.delegateCount--;
- }
- if ( special.remove ) {
- special.remove.call( elem, handleObj );
- }
- }
- }
-
- // Remove generic event handler if we removed something and no more handlers exist
- // (avoids potential for endless recursion during removal of special event handlers)
- if ( origCount && !handlers.length ) {
- if ( !special.teardown ||
- special.teardown.call( elem, namespaces, elemData.handle ) === false ) {
-
- jQuery.removeEvent( elem, type, elemData.handle );
- }
-
- delete events[ type ];
- }
- }
-
- // Remove data and the expando if it's no longer used
- if ( jQuery.isEmptyObject( events ) ) {
- dataPriv.remove( elem, "handle events" );
- }
- },
-
- dispatch: function( nativeEvent ) {
-
- // Make a writable jQuery.Event from the native event object
- var event = jQuery.event.fix( nativeEvent );
-
- var i, j, ret, matched, handleObj, handlerQueue,
- args = new Array( arguments.length ),
- handlers = ( dataPriv.get( this, "events" ) || {} )[ event.type ] || [],
- special = jQuery.event.special[ event.type ] || {};
-
- // Use the fix-ed jQuery.Event rather than the (read-only) native event
- args[ 0 ] = event;
-
- for ( i = 1; i < arguments.length; i++ ) {
- args[ i ] = arguments[ i ];
- }
-
- event.delegateTarget = this;
-
- // Call the preDispatch hook for the mapped type, and let it bail if desired
- if ( special.preDispatch && special.preDispatch.call( this, event ) === false ) {
- return;
- }
-
- // Determine handlers
- handlerQueue = jQuery.event.handlers.call( this, event, handlers );
-
- // Run delegates first; they may want to stop propagation beneath us
- i = 0;
- while ( ( matched = handlerQueue[ i++ ] ) && !event.isPropagationStopped() ) {
- event.currentTarget = matched.elem;
-
- j = 0;
- while ( ( handleObj = matched.handlers[ j++ ] ) &&
- !event.isImmediatePropagationStopped() ) {
-
- // Triggered event must either 1) have no namespace, or 2) have namespace(s)
- // a subset or equal to those in the bound event (both can have no namespace).
- if ( !event.rnamespace || event.rnamespace.test( handleObj.namespace ) ) {
-
- event.handleObj = handleObj;
- event.data = handleObj.data;
-
- ret = ( ( jQuery.event.special[ handleObj.origType ] || {} ).handle ||
- handleObj.handler ).apply( matched.elem, args );
-
- if ( ret !== undefined ) {
- if ( ( event.result = ret ) === false ) {
- event.preventDefault();
- event.stopPropagation();
- }
- }
- }
- }
- }
-
- // Call the postDispatch hook for the mapped type
- if ( special.postDispatch ) {
- special.postDispatch.call( this, event );
- }
-
- return event.result;
- },
-
- handlers: function( event, handlers ) {
- var i, handleObj, sel, matchedHandlers, matchedSelectors,
- handlerQueue = [],
- delegateCount = handlers.delegateCount,
- cur = event.target;
-
- // Find delegate handlers
- if ( delegateCount &&
-
- // Support: IE <=9
- // Black-hole SVG <use> instance trees (trac-13180)
- cur.nodeType &&
-
- // Support: Firefox <=42
- // Suppress spec-violating clicks indicating a non-primary pointer button (trac-3861)
- // https://www.w3.org/TR/DOM-Level-3-Events/#event-type-click
- // Support: IE 11 only
- // ...but not arrow key "clicks" of radio inputs, which can have `button` -1 (gh-2343)
- !( event.type === "click" && event.button >= 1 ) ) {
-
- for ( ; cur !== this; cur = cur.parentNode || this ) {
-
- // Don't check non-elements (#13208)
- // Don't process clicks on disabled elements (#6911, #8165, #11382, #11764)
- if ( cur.nodeType === 1 && !( event.type === "click" && cur.disabled === true ) ) {
- matchedHandlers = [];
- matchedSelectors = {};
- for ( i = 0; i < delegateCount; i++ ) {
- handleObj = handlers[ i ];
-
- // Don't conflict with Object.prototype properties (#13203)
- sel = handleObj.selector + " ";
-
- if ( matchedSelectors[ sel ] === undefined ) {
- matchedSelectors[ sel ] = handleObj.needsContext ?
- jQuery( sel, this ).index( cur ) > -1 :
- jQuery.find( sel, this, null, [ cur ] ).length;
- }
- if ( matchedSelectors[ sel ] ) {
- matchedHandlers.push( handleObj );
- }
- }
- if ( matchedHandlers.length ) {
- handlerQueue.push( { elem: cur, handlers: matchedHandlers } );
- }
- }
- }
- }
-
- // Add the remaining (directly-bound) handlers
- cur = this;
- if ( delegateCount < handlers.length ) {
- handlerQueue.push( { elem: cur, handlers: handlers.slice( delegateCount ) } );
- }
-
- return handlerQueue;
- },
-
- addProp: function( name, hook ) {
- Object.defineProperty( jQuery.Event.prototype, name, {
- enumerable: true,
- configurable: true,
-
- get: jQuery.isFunction( hook ) ?
- function() {
- if ( this.originalEvent ) {
- return hook( this.originalEvent );
- }
- } :
- function() {
- if ( this.originalEvent ) {
- return this.originalEvent[ name ];
- }
- },
-
- set: function( value ) {
- Object.defineProperty( this, name, {
- enumerable: true,
- configurable: true,
- writable: true,
- value: value
- } );
- }
- } );
- },
-
- fix: function( originalEvent ) {
- return originalEvent[ jQuery.expando ] ?
- originalEvent :
- new jQuery.Event( originalEvent );
- },
-
- special: {
- load: {
-
- // Prevent triggered image.load events from bubbling to window.load
- noBubble: true
- },
- focus: {
-
- // Fire native event if possible so blur/focus sequence is correct
- trigger: function() {
- if ( this !== safeActiveElement() && this.focus ) {
- this.focus();
- return false;
- }
- },
- delegateType: "focusin"
- },
- blur: {
- trigger: function() {
- if ( this === safeActiveElement() && this.blur ) {
- this.blur();
- return false;
- }
- },
- delegateType: "focusout"
- },
- click: {
-
- // For checkbox, fire native event so checked state will be right
- trigger: function() {
- if ( this.type === "checkbox" && this.click && nodeName( this, "input" ) ) {
- this.click();
- return false;
- }
- },
-
- // For cross-browser consistency, don't fire native .click() on links
- _default: function( event ) {
- return nodeName( event.target, "a" );
- }
- },
-
- beforeunload: {
- postDispatch: function( event ) {
-
- // Support: Firefox 20+
- // Firefox doesn't alert if the returnValue field is not set.
- if ( event.result !== undefined && event.originalEvent ) {
- event.originalEvent.returnValue = event.result;
- }
- }
- }
- }
-};
-
-jQuery.removeEvent = function( elem, type, handle ) {
-
- // This "if" is needed for plain objects
- if ( elem.removeEventListener ) {
- elem.removeEventListener( type, handle );
- }
-};
-
-jQuery.Event = function( src, props ) {
-
- // Allow instantiation without the 'new' keyword
- if ( !( this instanceof jQuery.Event ) ) {
- return new jQuery.Event( src, props );
- }
-
- // Event object
- if ( src && src.type ) {
- this.originalEvent = src;
- this.type = src.type;
-
- // Events bubbling up the document may have been marked as prevented
- // by a handler lower down the tree; reflect the correct value.
- this.isDefaultPrevented = src.defaultPrevented ||
- src.defaultPrevented === undefined &&
-
- // Support: Android <=2.3 only
- src.returnValue === false ?
- returnTrue :
- returnFalse;
-
- // Create target properties
- // Support: Safari <=6 - 7 only
- // Target should not be a text node (#504, #13143)
- this.target = ( src.target && src.target.nodeType === 3 ) ?
- src.target.parentNode :
- src.target;
-
- this.currentTarget = src.currentTarget;
- this.relatedTarget = src.relatedTarget;
-
- // Event type
- } else {
- this.type = src;
- }
-
- // Put explicitly provided properties onto the event object
- if ( props ) {
- jQuery.extend( this, props );
- }
-
- // Create a timestamp if incoming event doesn't have one
- this.timeStamp = src && src.timeStamp || jQuery.now();
-
- // Mark it as fixed
- this[ jQuery.expando ] = true;
-};
-
-// jQuery.Event is based on DOM3 Events as specified by the ECMAScript Language Binding
-// https://www.w3.org/TR/2003/WD-DOM-Level-3-Events-20030331/ecma-script-binding.html
-jQuery.Event.prototype = {
- constructor: jQuery.Event,
- isDefaultPrevented: returnFalse,
- isPropagationStopped: returnFalse,
- isImmediatePropagationStopped: returnFalse,
- isSimulated: false,
-
- preventDefault: function() {
- var e = this.originalEvent;
-
- this.isDefaultPrevented = returnTrue;
-
- if ( e && !this.isSimulated ) {
- e.preventDefault();
- }
- },
- stopPropagation: function() {
- var e = this.originalEvent;
-
- this.isPropagationStopped = returnTrue;
-
- if ( e && !this.isSimulated ) {
- e.stopPropagation();
- }
- },
- stopImmediatePropagation: function() {
- var e = this.originalEvent;
-
- this.isImmediatePropagationStopped = returnTrue;
-
- if ( e && !this.isSimulated ) {
- e.stopImmediatePropagation();
- }
-
- this.stopPropagation();
- }
-};
-
-// Includes all common event props including KeyEvent and MouseEvent specific props
-jQuery.each( {
- altKey: true,
- bubbles: true,
- cancelable: true,
- changedTouches: true,
- ctrlKey: true,
- detail: true,
- eventPhase: true,
- metaKey: true,
- pageX: true,
- pageY: true,
- shiftKey: true,
- view: true,
- "char": true,
- charCode: true,
- key: true,
- keyCode: true,
- button: true,
- buttons: true,
- clientX: true,
- clientY: true,
- offsetX: true,
- offsetY: true,
- pointerId: true,
- pointerType: true,
- screenX: true,
- screenY: true,
- targetTouches: true,
- toElement: true,
- touches: true,
-
- which: function( event ) {
- var button = event.button;
-
- // Add which for key events
- if ( event.which == null && rkeyEvent.test( event.type ) ) {
- return event.charCode != null ? event.charCode : event.keyCode;
- }
-
- // Add which for click: 1 === left; 2 === middle; 3 === right
- if ( !event.which && button !== undefined && rmouseEvent.test( event.type ) ) {
- if ( button & 1 ) {
- return 1;
- }
-
- if ( button & 2 ) {
- return 3;
- }
-
- if ( button & 4 ) {
- return 2;
- }
-
- return 0;
- }
-
- return event.which;
- }
-}, jQuery.event.addProp );
-
-// Create mouseenter/leave events using mouseover/out and event-time checks
-// so that event delegation works in jQuery.
-// Do the same for pointerenter/pointerleave and pointerover/pointerout
-//
-// Support: Safari 7 only
-// Safari sends mouseenter too often; see:
-// https://bugs.chromium.org/p/chromium/issues/detail?id=470258
-// for the description of the bug (it existed in older Chrome versions as well).
-jQuery.each( {
- mouseenter: "mouseover",
- mouseleave: "mouseout",
- pointerenter: "pointerover",
- pointerleave: "pointerout"
-}, function( orig, fix ) {
- jQuery.event.special[ orig ] = {
- delegateType: fix,
- bindType: fix,
-
- handle: function( event ) {
- var ret,
- target = this,
- related = event.relatedTarget,
- handleObj = event.handleObj;
-
- // For mouseenter/leave call the handler if related is outside the target.
- // NB: No relatedTarget if the mouse left/entered the browser window
- if ( !related || ( related !== target && !jQuery.contains( target, related ) ) ) {
- event.type = handleObj.origType;
- ret = handleObj.handler.apply( this, arguments );
- event.type = fix;
- }
- return ret;
- }
- };
-} );
-
-jQuery.fn.extend( {
-
- on: function( types, selector, data, fn ) {
- return on( this, types, selector, data, fn );
- },
- one: function( types, selector, data, fn ) {
- return on( this, types, selector, data, fn, 1 );
- },
- off: function( types, selector, fn ) {
- var handleObj, type;
- if ( types && types.preventDefault && types.handleObj ) {
-
- // ( event ) dispatched jQuery.Event
- handleObj = types.handleObj;
- jQuery( types.delegateTarget ).off(
- handleObj.namespace ?
- handleObj.origType + "." + handleObj.namespace :
- handleObj.origType,
- handleObj.selector,
- handleObj.handler
- );
- return this;
- }
- if ( typeof types === "object" ) {
-
- // ( types-object [, selector] )
- for ( type in types ) {
- this.off( type, selector, types[ type ] );
- }
- return this;
- }
- if ( selector === false || typeof selector === "function" ) {
-
- // ( types [, fn] )
- fn = selector;
- selector = undefined;
- }
- if ( fn === false ) {
- fn = returnFalse;
- }
- return this.each( function() {
- jQuery.event.remove( this, types, fn, selector );
- } );
- }
-} );
-
-
-var
-
- /* eslint-disable max-len */
-
- // See https://github.com/eslint/eslint/issues/3229
- rxhtmlTag = /<(?!area|br|col|embed|hr|img|input|link|meta|param)(([a-z][^\/\0>\x20\t\r\n\f]*)[^>]*)\/>/gi,
-
- /* eslint-enable */
-
- // Support: IE <=10 - 11, Edge 12 - 13
- // In IE/Edge using regex groups here causes severe slowdowns.
- // See https://connect.microsoft.com/IE/feedback/details/1736512/
- rnoInnerhtml = /<script|<style|<link/i,
-
- // checked="checked" or checked
- rchecked = /checked\s*(?:[^=]|=\s*.checked.)/i,
- rscriptTypeMasked = /^true\/(.*)/,
- rcleanScript = /^\s*<!(?:\[CDATA\[|--)|(?:\]\]|--)>\s*$/g;
-
-// Prefer a tbody over its parent table for containing new rows
-function manipulationTarget( elem, content ) {
- if ( nodeName( elem, "table" ) &&
- nodeName( content.nodeType !== 11 ? content : content.firstChild, "tr" ) ) {
-
- return jQuery( ">tbody", elem )[ 0 ] || elem;
- }
-
- return elem;
-}
-
-// Replace/restore the type attribute of script elements for safe DOM manipulation
-function disableScript( elem ) {
- elem.type = ( elem.getAttribute( "type" ) !== null ) + "/" + elem.type;
- return elem;
-}
-function restoreScript( elem ) {
- var match = rscriptTypeMasked.exec( elem.type );
-
- if ( match ) {
- elem.type = match[ 1 ];
- } else {
- elem.removeAttribute( "type" );
- }
-
- return elem;
-}
-
-function cloneCopyEvent( src, dest ) {
- var i, l, type, pdataOld, pdataCur, udataOld, udataCur, events;
-
- if ( dest.nodeType !== 1 ) {
- return;
- }
-
- // 1. Copy private data: events, handlers, etc.
- if ( dataPriv.hasData( src ) ) {
- pdataOld = dataPriv.access( src );
- pdataCur = dataPriv.set( dest, pdataOld );
- events = pdataOld.events;
-
- if ( events ) {
- delete pdataCur.handle;
- pdataCur.events = {};
-
- for ( type in events ) {
- for ( i = 0, l = events[ type ].length; i < l; i++ ) {
- jQuery.event.add( dest, type, events[ type ][ i ] );
- }
- }
- }
- }
-
- // 2. Copy user data
- if ( dataUser.hasData( src ) ) {
- udataOld = dataUser.access( src );
- udataCur = jQuery.extend( {}, udataOld );
-
- dataUser.set( dest, udataCur );
- }
-}
-
-// Fix IE bugs, see support tests
-function fixInput( src, dest ) {
- var nodeName = dest.nodeName.toLowerCase();
-
- // Fails to persist the checked state of a cloned checkbox or radio button.
- if ( nodeName === "input" && rcheckableType.test( src.type ) ) {
- dest.checked = src.checked;
-
- // Fails to return the selected option to the default selected state when cloning options
- } else if ( nodeName === "input" || nodeName === "textarea" ) {
- dest.defaultValue = src.defaultValue;
- }
-}
-
-function domManip( collection, args, callback, ignored ) {
-
- // Flatten any nested arrays
- args = concat.apply( [], args );
-
- var fragment, first, scripts, hasScripts, node, doc,
- i = 0,
- l = collection.length,
- iNoClone = l - 1,
- value = args[ 0 ],
- isFunction = jQuery.isFunction( value );
-
- // We can't cloneNode fragments that contain checked, in WebKit
- if ( isFunction ||
- ( l > 1 && typeof value === "string" &&
- !support.checkClone && rchecked.test( value ) ) ) {
- return collection.each( function( index ) {
- var self = collection.eq( index );
- if ( isFunction ) {
- args[ 0 ] = value.call( this, index, self.html() );
- }
- domManip( self, args, callback, ignored );
- } );
- }
-
- if ( l ) {
- fragment = buildFragment( args, collection[ 0 ].ownerDocument, false, collection, ignored );
- first = fragment.firstChild;
-
- if ( fragment.childNodes.length === 1 ) {
- fragment = first;
- }
-
- // Require either new content or an interest in ignored elements to invoke the callback
- if ( first || ignored ) {
- scripts = jQuery.map( getAll( fragment, "script" ), disableScript );
- hasScripts = scripts.length;
-
- // Use the original fragment for the last item
- // instead of the first because it can end up
- // being emptied incorrectly in certain situations (#8070).
- for ( ; i < l; i++ ) {
- node = fragment;
-
- if ( i !== iNoClone ) {
- node = jQuery.clone( node, true, true );
-
- // Keep references to cloned scripts for later restoration
- if ( hasScripts ) {
-
- // Support: Android <=4.0 only, PhantomJS 1 only
- // push.apply(_, arraylike) throws on ancient WebKit
- jQuery.merge( scripts, getAll( node, "script" ) );
- }
- }
-
- callback.call( collection[ i ], node, i );
- }
-
- if ( hasScripts ) {
- doc = scripts[ scripts.length - 1 ].ownerDocument;
-
- // Reenable scripts
- jQuery.map( scripts, restoreScript );
-
- // Evaluate executable scripts on first document insertion
- for ( i = 0; i < hasScripts; i++ ) {
- node = scripts[ i ];
- if ( rscriptType.test( node.type || "" ) &&
- !dataPriv.access( node, "globalEval" ) &&
- jQuery.contains( doc, node ) ) {
-
- if ( node.src ) {
-
- // Optional AJAX dependency, but won't run scripts if not present
- if ( jQuery._evalUrl ) {
- jQuery._evalUrl( node.src );
- }
- } else {
- DOMEval( node.textContent.replace( rcleanScript, "" ), doc );
- }
- }
- }
- }
- }
- }
-
- return collection;
-}
-
-function remove( elem, selector, keepData ) {
- var node,
- nodes = selector ? jQuery.filter( selector, elem ) : elem,
- i = 0;
-
- for ( ; ( node = nodes[ i ] ) != null; i++ ) {
- if ( !keepData && node.nodeType === 1 ) {
- jQuery.cleanData( getAll( node ) );
- }
-
- if ( node.parentNode ) {
- if ( keepData && jQuery.contains( node.ownerDocument, node ) ) {
- setGlobalEval( getAll( node, "script" ) );
- }
- node.parentNode.removeChild( node );
- }
- }
-
- return elem;
-}
-
-jQuery.extend( {
- htmlPrefilter: function( html ) {
- return html.replace( rxhtmlTag, "<$1></$2>" );
- },
-
- clone: function( elem, dataAndEvents, deepDataAndEvents ) {
- var i, l, srcElements, destElements,
- clone = elem.cloneNode( true ),
- inPage = jQuery.contains( elem.ownerDocument, elem );
-
- // Fix IE cloning issues
- if ( !support.noCloneChecked && ( elem.nodeType === 1 || elem.nodeType === 11 ) &&
- !jQuery.isXMLDoc( elem ) ) {
-
- // We eschew Sizzle here for performance reasons: https://jsperf.com/getall-vs-sizzle/2
- destElements = getAll( clone );
- srcElements = getAll( elem );
-
- for ( i = 0, l = srcElements.length; i < l; i++ ) {
- fixInput( srcElements[ i ], destElements[ i ] );
- }
- }
-
- // Copy the events from the original to the clone
- if ( dataAndEvents ) {
- if ( deepDataAndEvents ) {
- srcElements = srcElements || getAll( elem );
- destElements = destElements || getAll( clone );
-
- for ( i = 0, l = srcElements.length; i < l; i++ ) {
- cloneCopyEvent( srcElements[ i ], destElements[ i ] );
- }
- } else {
- cloneCopyEvent( elem, clone );
- }
- }
-
- // Preserve script evaluation history
- destElements = getAll( clone, "script" );
- if ( destElements.length > 0 ) {
- setGlobalEval( destElements, !inPage && getAll( elem, "script" ) );
- }
-
- // Return the cloned set
- return clone;
- },
-
- cleanData: function( elems ) {
- var data, elem, type,
- special = jQuery.event.special,
- i = 0;
-
- for ( ; ( elem = elems[ i ] ) !== undefined; i++ ) {
- if ( acceptData( elem ) ) {
- if ( ( data = elem[ dataPriv.expando ] ) ) {
- if ( data.events ) {
- for ( type in data.events ) {
- if ( special[ type ] ) {
- jQuery.event.remove( elem, type );
-
- // This is a shortcut to avoid jQuery.event.remove's overhead
- } else {
- jQuery.removeEvent( elem, type, data.handle );
- }
- }
- }
-
- // Support: Chrome <=35 - 45+
- // Assign undefined instead of using delete, see Data#remove
- elem[ dataPriv.expando ] = undefined;
- }
- if ( elem[ dataUser.expando ] ) {
-
- // Support: Chrome <=35 - 45+
- // Assign undefined instead of using delete, see Data#remove
- elem[ dataUser.expando ] = undefined;
- }
- }
- }
- }
-} );
-
-jQuery.fn.extend( {
- detach: function( selector ) {
- return remove( this, selector, true );
- },
-
- remove: function( selector ) {
- return remove( this, selector );
- },
-
- text: function( value ) {
- return access( this, function( value ) {
- return value === undefined ?
- jQuery.text( this ) :
- this.empty().each( function() {
- if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) {
- this.textContent = value;
- }
- } );
- }, null, value, arguments.length );
- },
-
- append: function() {
- return domManip( this, arguments, function( elem ) {
- if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) {
- var target = manipulationTarget( this, elem );
- target.appendChild( elem );
- }
- } );
- },
-
- prepend: function() {
- return domManip( this, arguments, function( elem ) {
- if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) {
- var target = manipulationTarget( this, elem );
- target.insertBefore( elem, target.firstChild );
- }
- } );
- },
-
- before: function() {
- return domManip( this, arguments, function( elem ) {
- if ( this.parentNode ) {
- this.parentNode.insertBefore( elem, this );
- }
- } );
- },
-
- after: function() {
- return domManip( this, arguments, function( elem ) {
- if ( this.parentNode ) {
- this.parentNode.insertBefore( elem, this.nextSibling );
- }
- } );
- },
-
- empty: function() {
- var elem,
- i = 0;
-
- for ( ; ( elem = this[ i ] ) != null; i++ ) {
- if ( elem.nodeType === 1 ) {
-
- // Prevent memory leaks
- jQuery.cleanData( getAll( elem, false ) );
-
- // Remove any remaining nodes
- elem.textContent = "";
- }
- }
-
- return this;
- },
-
- clone: function( dataAndEvents, deepDataAndEvents ) {
- dataAndEvents = dataAndEvents == null ? false : dataAndEvents;
- deepDataAndEvents = deepDataAndEvents == null ? dataAndEvents : deepDataAndEvents;
-
- return this.map( function() {
- return jQuery.clone( this, dataAndEvents, deepDataAndEvents );
- } );
- },
-
- html: function( value ) {
- return access( this, function( value ) {
- var elem = this[ 0 ] || {},
- i = 0,
- l = this.length;
-
- if ( value === undefined && elem.nodeType === 1 ) {
- return elem.innerHTML;
- }
-
- // See if we can take a shortcut and just use innerHTML
- if ( typeof value === "string" && !rnoInnerhtml.test( value ) &&
- !wrapMap[ ( rtagName.exec( value ) || [ "", "" ] )[ 1 ].toLowerCase() ] ) {
-
- value = jQuery.htmlPrefilter( value );
-
- try {
- for ( ; i < l; i++ ) {
- elem = this[ i ] || {};
-
- // Remove element nodes and prevent memory leaks
- if ( elem.nodeType === 1 ) {
- jQuery.cleanData( getAll( elem, false ) );
- elem.innerHTML = value;
- }
- }
-
- elem = 0;
-
- // If using innerHTML throws an exception, use the fallback method
- } catch ( e ) {}
- }
-
- if ( elem ) {
- this.empty().append( value );
- }
- }, null, value, arguments.length );
- },
-
- replaceWith: function() {
- var ignored = [];
-
- // Make the changes, replacing each non-ignored context element with the new content
- return domManip( this, arguments, function( elem ) {
- var parent = this.parentNode;
-
- if ( jQuery.inArray( this, ignored ) < 0 ) {
- jQuery.cleanData( getAll( this ) );
- if ( parent ) {
- parent.replaceChild( elem, this );
- }
- }
-
- // Force callback invocation
- }, ignored );
- }
-} );
-
-jQuery.each( {
- appendTo: "append",
- prependTo: "prepend",
- insertBefore: "before",
- insertAfter: "after",
- replaceAll: "replaceWith"
-}, function( name, original ) {
- jQuery.fn[ name ] = function( selector ) {
- var elems,
- ret = [],
- insert = jQuery( selector ),
- last = insert.length - 1,
- i = 0;
-
- for ( ; i <= last; i++ ) {
- elems = i === last ? this : this.clone( true );
- jQuery( insert[ i ] )[ original ]( elems );
-
- // Support: Android <=4.0 only, PhantomJS 1 only
- // .get() because push.apply(_, arraylike) throws on ancient WebKit
- push.apply( ret, elems.get() );
- }
-
- return this.pushStack( ret );
- };
-} );
-var rmargin = ( /^margin/ );
-
-var rnumnonpx = new RegExp( "^(" + pnum + ")(?!px)[a-z%]+$", "i" );
-
-var getStyles = function( elem ) {
-
- // Support: IE <=11 only, Firefox <=30 (#15098, #14150)
- // IE throws on elements created in popups
- // FF meanwhile throws on frame elements through "defaultView.getComputedStyle"
- var view = elem.ownerDocument.defaultView;
-
- if ( !view || !view.opener ) {
- view = window;
- }
-
- return view.getComputedStyle( elem );
- };
-
-
-
-( function() {
-
- // Executing both pixelPosition & boxSizingReliable tests require only one layout
- // so they're executed at the same time to save the second computation.
- function computeStyleTests() {
-
- // This is a singleton, we need to execute it only once
- if ( !div ) {
- return;
- }
-
- div.style.cssText =
- "box-sizing:border-box;" +
- "position:relative;display:block;" +
- "margin:auto;border:1px;padding:1px;" +
- "top:1%;width:50%";
- div.innerHTML = "";
- documentElement.appendChild( container );
-
- var divStyle = window.getComputedStyle( div );
- pixelPositionVal = divStyle.top !== "1%";
-
- // Support: Android 4.0 - 4.3 only, Firefox <=3 - 44
- reliableMarginLeftVal = divStyle.marginLeft === "2px";
- boxSizingReliableVal = divStyle.width === "4px";
-
- // Support: Android 4.0 - 4.3 only
- // Some styles come back with percentage values, even though they shouldn't
- div.style.marginRight = "50%";
- pixelMarginRightVal = divStyle.marginRight === "4px";
-
- documentElement.removeChild( container );
-
- // Nullify the div so it wouldn't be stored in the memory and
- // it will also be a sign that checks already performed
- div = null;
- }
-
- var pixelPositionVal, boxSizingReliableVal, pixelMarginRightVal, reliableMarginLeftVal,
- container = document.createElement( "div" ),
- div = document.createElement( "div" );
-
- // Finish early in limited (non-browser) environments
- if ( !div.style ) {
- return;
- }
-
- // Support: IE <=9 - 11 only
- // Style of cloned element affects source element cloned (#8908)
- div.style.backgroundClip = "content-box";
- div.cloneNode( true ).style.backgroundClip = "";
- support.clearCloneStyle = div.style.backgroundClip === "content-box";
-
- container.style.cssText = "border:0;width:8px;height:0;top:0;left:-9999px;" +
- "padding:0;margin-top:1px;position:absolute";
- container.appendChild( div );
-
- jQuery.extend( support, {
- pixelPosition: function() {
- computeStyleTests();
- return pixelPositionVal;
- },
- boxSizingReliable: function() {
- computeStyleTests();
- return boxSizingReliableVal;
- },
- pixelMarginRight: function() {
- computeStyleTests();
- return pixelMarginRightVal;
- },
- reliableMarginLeft: function() {
- computeStyleTests();
- return reliableMarginLeftVal;
- }
- } );
-} )();
-
-
-function curCSS( elem, name, computed ) {
- var width, minWidth, maxWidth, ret,
-
- // Support: Firefox 51+
- // Retrieving style before computed somehow
- // fixes an issue with getting wrong values
- // on detached elements
- style = elem.style;
-
- computed = computed || getStyles( elem );
-
- // getPropertyValue is needed for:
- // .css('filter') (IE 9 only, #12537)
- // .css('--customProperty) (#3144)
- if ( computed ) {
- ret = computed.getPropertyValue( name ) || computed[ name ];
-
- if ( ret === "" && !jQuery.contains( elem.ownerDocument, elem ) ) {
- ret = jQuery.style( elem, name );
- }
-
- // A tribute to the "awesome hack by Dean Edwards"
- // Android Browser returns percentage for some values,
- // but width seems to be reliably pixels.
- // This is against the CSSOM draft spec:
- // https://drafts.csswg.org/cssom/#resolved-values
- if ( !support.pixelMarginRight() && rnumnonpx.test( ret ) && rmargin.test( name ) ) {
-
- // Remember the original values
- width = style.width;
- minWidth = style.minWidth;
- maxWidth = style.maxWidth;
-
- // Put in the new values to get a computed value out
- style.minWidth = style.maxWidth = style.width = ret;
- ret = computed.width;
-
- // Revert the changed values
- style.width = width;
- style.minWidth = minWidth;
- style.maxWidth = maxWidth;
- }
- }
-
- return ret !== undefined ?
-
- // Support: IE <=9 - 11 only
- // IE returns zIndex value as an integer.
- ret + "" :
- ret;
-}
-
-
-function addGetHookIf( conditionFn, hookFn ) {
-
- // Define the hook, we'll check on the first run if it's really needed.
- return {
- get: function() {
- if ( conditionFn() ) {
-
- // Hook not needed (or it's not possible to use it due
- // to missing dependency), remove it.
- delete this.get;
- return;
- }
-
- // Hook needed; redefine it so that the support test is not executed again.
- return ( this.get = hookFn ).apply( this, arguments );
- }
- };
-}
-
-
-var
-
- // Swappable if display is none or starts with table
- // except "table", "table-cell", or "table-caption"
- // See here for display values: https://developer.mozilla.org/en-US/docs/CSS/display
- rdisplayswap = /^(none|table(?!-c[ea]).+)/,
- rcustomProp = /^--/,
- cssShow = { position: "absolute", visibility: "hidden", display: "block" },
- cssNormalTransform = {
- letterSpacing: "0",
- fontWeight: "400"
- },
-
- cssPrefixes = [ "Webkit", "Moz", "ms" ],
- emptyStyle = document.createElement( "div" ).style;
-
-// Return a css property mapped to a potentially vendor prefixed property
-function vendorPropName( name ) {
-
- // Shortcut for names that are not vendor prefixed
- if ( name in emptyStyle ) {
- return name;
- }
-
- // Check for vendor prefixed names
- var capName = name[ 0 ].toUpperCase() + name.slice( 1 ),
- i = cssPrefixes.length;
-
- while ( i-- ) {
- name = cssPrefixes[ i ] + capName;
- if ( name in emptyStyle ) {
- return name;
- }
- }
-}
-
-// Return a property mapped along what jQuery.cssProps suggests or to
-// a vendor prefixed property.
-function finalPropName( name ) {
- var ret = jQuery.cssProps[ name ];
- if ( !ret ) {
- ret = jQuery.cssProps[ name ] = vendorPropName( name ) || name;
- }
- return ret;
-}
-
-function setPositiveNumber( elem, value, subtract ) {
-
- // Any relative (+/-) values have already been
- // normalized at this point
- var matches = rcssNum.exec( value );
- return matches ?
-
- // Guard against undefined "subtract", e.g., when used as in cssHooks
- Math.max( 0, matches[ 2 ] - ( subtract || 0 ) ) + ( matches[ 3 ] || "px" ) :
- value;
-}
-
-function augmentWidthOrHeight( elem, name, extra, isBorderBox, styles ) {
- var i,
- val = 0;
-
- // If we already have the right measurement, avoid augmentation
- if ( extra === ( isBorderBox ? "border" : "content" ) ) {
- i = 4;
-
- // Otherwise initialize for horizontal or vertical properties
- } else {
- i = name === "width" ? 1 : 0;
- }
-
- for ( ; i < 4; i += 2 ) {
-
- // Both box models exclude margin, so add it if we want it
- if ( extra === "margin" ) {
- val += jQuery.css( elem, extra + cssExpand[ i ], true, styles );
- }
-
- if ( isBorderBox ) {
-
- // border-box includes padding, so remove it if we want content
- if ( extra === "content" ) {
- val -= jQuery.css( elem, "padding" + cssExpand[ i ], true, styles );
- }
-
- // At this point, extra isn't border nor margin, so remove border
- if ( extra !== "margin" ) {
- val -= jQuery.css( elem, "border" + cssExpand[ i ] + "Width", true, styles );
- }
- } else {
-
- // At this point, extra isn't content, so add padding
- val += jQuery.css( elem, "padding" + cssExpand[ i ], true, styles );
-
- // At this point, extra isn't content nor padding, so add border
- if ( extra !== "padding" ) {
- val += jQuery.css( elem, "border" + cssExpand[ i ] + "Width", true, styles );
- }
- }
- }
-
- return val;
-}
-
-function getWidthOrHeight( elem, name, extra ) {
-
- // Start with computed style
- var valueIsBorderBox,
- styles = getStyles( elem ),
- val = curCSS( elem, name, styles ),
- isBorderBox = jQuery.css( elem, "boxSizing", false, styles ) === "border-box";
-
- // Computed unit is not pixels. Stop here and return.
- if ( rnumnonpx.test( val ) ) {
- return val;
- }
-
- // Check for style in case a browser which returns unreliable values
- // for getComputedStyle silently falls back to the reliable elem.style
- valueIsBorderBox = isBorderBox &&
- ( support.boxSizingReliable() || val === elem.style[ name ] );
-
- // Fall back to offsetWidth/Height when value is "auto"
- // This happens for inline elements with no explicit setting (gh-3571)
- if ( val === "auto" ) {
- val = elem[ "offset" + name[ 0 ].toUpperCase() + name.slice( 1 ) ];
- }
-
- // Normalize "", auto, and prepare for extra
- val = parseFloat( val ) || 0;
-
- // Use the active box-sizing model to add/subtract irrelevant styles
- return ( val +
- augmentWidthOrHeight(
- elem,
- name,
- extra || ( isBorderBox ? "border" : "content" ),
- valueIsBorderBox,
- styles
- )
- ) + "px";
-}
-
-jQuery.extend( {
-
- // Add in style property hooks for overriding the default
- // behavior of getting and setting a style property
- cssHooks: {
- opacity: {
- get: function( elem, computed ) {
- if ( computed ) {
-
- // We should always get a number back from opacity
- var ret = curCSS( elem, "opacity" );
- return ret === "" ? "1" : ret;
- }
- }
- }
- },
-
- // Don't automatically add "px" to these possibly-unitless properties
- cssNumber: {
- "animationIterationCount": true,
- "columnCount": true,
- "fillOpacity": true,
- "flexGrow": true,
- "flexShrink": true,
- "fontWeight": true,
- "lineHeight": true,
- "opacity": true,
- "order": true,
- "orphans": true,
- "widows": true,
- "zIndex": true,
- "zoom": true
- },
-
- // Add in properties whose names you wish to fix before
- // setting or getting the value
- cssProps: {
- "float": "cssFloat"
- },
-
- // Get and set the style property on a DOM Node
- style: function( elem, name, value, extra ) {
-
- // Don't set styles on text and comment nodes
- if ( !elem || elem.nodeType === 3 || elem.nodeType === 8 || !elem.style ) {
- return;
- }
-
- // Make sure that we're working with the right name
- var ret, type, hooks,
- origName = jQuery.camelCase( name ),
- isCustomProp = rcustomProp.test( name ),
- style = elem.style;
-
- // Make sure that we're working with the right name. We don't
- // want to query the value if it is a CSS custom property
- // since they are user-defined.
- if ( !isCustomProp ) {
- name = finalPropName( origName );
- }
-
- // Gets hook for the prefixed version, then unprefixed version
- hooks = jQuery.cssHooks[ name ] || jQuery.cssHooks[ origName ];
-
- // Check if we're setting a value
- if ( value !== undefined ) {
- type = typeof value;
-
- // Convert "+=" or "-=" to relative numbers (#7345)
- if ( type === "string" && ( ret = rcssNum.exec( value ) ) && ret[ 1 ] ) {
- value = adjustCSS( elem, name, ret );
-
- // Fixes bug #9237
- type = "number";
- }
-
- // Make sure that null and NaN values aren't set (#7116)
- if ( value == null || value !== value ) {
- return;
- }
-
- // If a number was passed in, add the unit (except for certain CSS properties)
- if ( type === "number" ) {
- value += ret && ret[ 3 ] || ( jQuery.cssNumber[ origName ] ? "" : "px" );
- }
-
- // background-* props affect original clone's values
- if ( !support.clearCloneStyle && value === "" && name.indexOf( "background" ) === 0 ) {
- style[ name ] = "inherit";
- }
-
- // If a hook was provided, use that value, otherwise just set the specified value
- if ( !hooks || !( "set" in hooks ) ||
- ( value = hooks.set( elem, value, extra ) ) !== undefined ) {
-
- if ( isCustomProp ) {
- style.setProperty( name, value );
- } else {
- style[ name ] = value;
- }
- }
-
- } else {
-
- // If a hook was provided get the non-computed value from there
- if ( hooks && "get" in hooks &&
- ( ret = hooks.get( elem, false, extra ) ) !== undefined ) {
-
- return ret;
- }
-
- // Otherwise just get the value from the style object
- return style[ name ];
- }
- },
-
- css: function( elem, name, extra, styles ) {
- var val, num, hooks,
- origName = jQuery.camelCase( name ),
- isCustomProp = rcustomProp.test( name );
-
- // Make sure that we're working with the right name. We don't
- // want to modify the value if it is a CSS custom property
- // since they are user-defined.
- if ( !isCustomProp ) {
- name = finalPropName( origName );
- }
-
- // Try prefixed name followed by the unprefixed name
- hooks = jQuery.cssHooks[ name ] || jQuery.cssHooks[ origName ];
-
- // If a hook was provided get the computed value from there
- if ( hooks && "get" in hooks ) {
- val = hooks.get( elem, true, extra );
- }
-
- // Otherwise, if a way to get the computed value exists, use that
- if ( val === undefined ) {
- val = curCSS( elem, name, styles );
- }
-
- // Convert "normal" to computed value
- if ( val === "normal" && name in cssNormalTransform ) {
- val = cssNormalTransform[ name ];
- }
-
- // Make numeric if forced or a qualifier was provided and val looks numeric
- if ( extra === "" || extra ) {
- num = parseFloat( val );
- return extra === true || isFinite( num ) ? num || 0 : val;
- }
-
- return val;
- }
-} );
-
-jQuery.each( [ "height", "width" ], function( i, name ) {
- jQuery.cssHooks[ name ] = {
- get: function( elem, computed, extra ) {
- if ( computed ) {
-
- // Certain elements can have dimension info if we invisibly show them
- // but it must have a current display style that would benefit
- return rdisplayswap.test( jQuery.css( elem, "display" ) ) &&
-
- // Support: Safari 8+
- // Table columns in Safari have non-zero offsetWidth & zero
- // getBoundingClientRect().width unless display is changed.
- // Support: IE <=11 only
- // Running getBoundingClientRect on a disconnected node
- // in IE throws an error.
- ( !elem.getClientRects().length || !elem.getBoundingClientRect().width ) ?
- swap( elem, cssShow, function() {
- return getWidthOrHeight( elem, name, extra );
- } ) :
- getWidthOrHeight( elem, name, extra );
- }
- },
-
- set: function( elem, value, extra ) {
- var matches,
- styles = extra && getStyles( elem ),
- subtract = extra && augmentWidthOrHeight(
- elem,
- name,
- extra,
- jQuery.css( elem, "boxSizing", false, styles ) === "border-box",
- styles
- );
-
- // Convert to pixels if value adjustment is needed
- if ( subtract && ( matches = rcssNum.exec( value ) ) &&
- ( matches[ 3 ] || "px" ) !== "px" ) {
-
- elem.style[ name ] = value;
- value = jQuery.css( elem, name );
- }
-
- return setPositiveNumber( elem, value, subtract );
- }
- };
-} );
-
-jQuery.cssHooks.marginLeft = addGetHookIf( support.reliableMarginLeft,
- function( elem, computed ) {
- if ( computed ) {
- return ( parseFloat( curCSS( elem, "marginLeft" ) ) ||
- elem.getBoundingClientRect().left -
- swap( elem, { marginLeft: 0 }, function() {
- return elem.getBoundingClientRect().left;
- } )
- ) + "px";
- }
- }
-);
-
-// These hooks are used by animate to expand properties
-jQuery.each( {
- margin: "",
- padding: "",
- border: "Width"
-}, function( prefix, suffix ) {
- jQuery.cssHooks[ prefix + suffix ] = {
- expand: function( value ) {
- var i = 0,
- expanded = {},
-
- // Assumes a single number if not a string
- parts = typeof value === "string" ? value.split( " " ) : [ value ];
-
- for ( ; i < 4; i++ ) {
- expanded[ prefix + cssExpand[ i ] + suffix ] =
- parts[ i ] || parts[ i - 2 ] || parts[ 0 ];
- }
-
- return expanded;
- }
- };
-
- if ( !rmargin.test( prefix ) ) {
- jQuery.cssHooks[ prefix + suffix ].set = setPositiveNumber;
- }
-} );
-
-jQuery.fn.extend( {
- css: function( name, value ) {
- return access( this, function( elem, name, value ) {
- var styles, len,
- map = {},
- i = 0;
-
- if ( Array.isArray( name ) ) {
- styles = getStyles( elem );
- len = name.length;
-
- for ( ; i < len; i++ ) {
- map[ name[ i ] ] = jQuery.css( elem, name[ i ], false, styles );
- }
-
- return map;
- }
-
- return value !== undefined ?
- jQuery.style( elem, name, value ) :
- jQuery.css( elem, name );
- }, name, value, arguments.length > 1 );
- }
-} );
-
-
-function Tween( elem, options, prop, end, easing ) {
- return new Tween.prototype.init( elem, options, prop, end, easing );
-}
-jQuery.Tween = Tween;
-
-Tween.prototype = {
- constructor: Tween,
- init: function( elem, options, prop, end, easing, unit ) {
- this.elem = elem;
- this.prop = prop;
- this.easing = easing || jQuery.easing._default;
- this.options = options;
- this.start = this.now = this.cur();
- this.end = end;
- this.unit = unit || ( jQuery.cssNumber[ prop ] ? "" : "px" );
- },
- cur: function() {
- var hooks = Tween.propHooks[ this.prop ];
-
- return hooks && hooks.get ?
- hooks.get( this ) :
- Tween.propHooks._default.get( this );
- },
- run: function( percent ) {
- var eased,
- hooks = Tween.propHooks[ this.prop ];
-
- if ( this.options.duration ) {
- this.pos = eased = jQuery.easing[ this.easing ](
- percent, this.options.duration * percent, 0, 1, this.options.duration
- );
- } else {
- this.pos = eased = percent;
- }
- this.now = ( this.end - this.start ) * eased + this.start;
-
- if ( this.options.step ) {
- this.options.step.call( this.elem, this.now, this );
- }
-
- if ( hooks && hooks.set ) {
- hooks.set( this );
- } else {
- Tween.propHooks._default.set( this );
- }
- return this;
- }
-};
-
-Tween.prototype.init.prototype = Tween.prototype;
-
-Tween.propHooks = {
- _default: {
- get: function( tween ) {
- var result;
-
- // Use a property on the element directly when it is not a DOM element,
- // or when there is no matching style property that exists.
- if ( tween.elem.nodeType !== 1 ||
- tween.elem[ tween.prop ] != null && tween.elem.style[ tween.prop ] == null ) {
- return tween.elem[ tween.prop ];
- }
-
- // Passing an empty string as a 3rd parameter to .css will automatically
- // attempt a parseFloat and fallback to a string if the parse fails.
- // Simple values such as "10px" are parsed to Float;
- // complex values such as "rotate(1rad)" are returned as-is.
- result = jQuery.css( tween.elem, tween.prop, "" );
-
- // Empty strings, null, undefined and "auto" are converted to 0.
- return !result || result === "auto" ? 0 : result;
- },
- set: function( tween ) {
-
- // Use step hook for back compat.
- // Use cssHook if its there.
- // Use .style if available and use plain properties where available.
- if ( jQuery.fx.step[ tween.prop ] ) {
- jQuery.fx.step[ tween.prop ]( tween );
- } else if ( tween.elem.nodeType === 1 &&
- ( tween.elem.style[ jQuery.cssProps[ tween.prop ] ] != null ||
- jQuery.cssHooks[ tween.prop ] ) ) {
- jQuery.style( tween.elem, tween.prop, tween.now + tween.unit );
- } else {
- tween.elem[ tween.prop ] = tween.now;
- }
- }
- }
-};
-
-// Support: IE <=9 only
-// Panic based approach to setting things on disconnected nodes
-Tween.propHooks.scrollTop = Tween.propHooks.scrollLeft = {
- set: function( tween ) {
- if ( tween.elem.nodeType && tween.elem.parentNode ) {
- tween.elem[ tween.prop ] = tween.now;
- }
- }
-};
-
-jQuery.easing = {
- linear: function( p ) {
- return p;
- },
- swing: function( p ) {
- return 0.5 - Math.cos( p * Math.PI ) / 2;
- },
- _default: "swing"
-};
-
-jQuery.fx = Tween.prototype.init;
-
-// Back compat <1.8 extension point
-jQuery.fx.step = {};
-
-
-
-
-var
- fxNow, inProgress,
- rfxtypes = /^(?:toggle|show|hide)$/,
- rrun = /queueHooks$/;
-
-function schedule() {
- if ( inProgress ) {
- if ( document.hidden === false && window.requestAnimationFrame ) {
- window.requestAnimationFrame( schedule );
- } else {
- window.setTimeout( schedule, jQuery.fx.interval );
- }
-
- jQuery.fx.tick();
- }
-}
-
-// Animations created synchronously will run synchronously
-function createFxNow() {
- window.setTimeout( function() {
- fxNow = undefined;
- } );
- return ( fxNow = jQuery.now() );
-}
-
-// Generate parameters to create a standard animation
-function genFx( type, includeWidth ) {
- var which,
- i = 0,
- attrs = { height: type };
-
- // If we include width, step value is 1 to do all cssExpand values,
- // otherwise step value is 2 to skip over Left and Right
- includeWidth = includeWidth ? 1 : 0;
- for ( ; i < 4; i += 2 - includeWidth ) {
- which = cssExpand[ i ];
- attrs[ "margin" + which ] = attrs[ "padding" + which ] = type;
- }
-
- if ( includeWidth ) {
- attrs.opacity = attrs.width = type;
- }
-
- return attrs;
-}
-
-function createTween( value, prop, animation ) {
- var tween,
- collection = ( Animation.tweeners[ prop ] || [] ).concat( Animation.tweeners[ "*" ] ),
- index = 0,
- length = collection.length;
- for ( ; index < length; index++ ) {
- if ( ( tween = collection[ index ].call( animation, prop, value ) ) ) {
-
- // We're done with this property
- return tween;
- }
- }
-}
-
-function defaultPrefilter( elem, props, opts ) {
- var prop, value, toggle, hooks, oldfire, propTween, restoreDisplay, display,
- isBox = "width" in props || "height" in props,
- anim = this,
- orig = {},
- style = elem.style,
- hidden = elem.nodeType && isHiddenWithinTree( elem ),
- dataShow = dataPriv.get( elem, "fxshow" );
-
- // Queue-skipping animations hijack the fx hooks
- if ( !opts.queue ) {
- hooks = jQuery._queueHooks( elem, "fx" );
- if ( hooks.unqueued == null ) {
- hooks.unqueued = 0;
- oldfire = hooks.empty.fire;
- hooks.empty.fire = function() {
- if ( !hooks.unqueued ) {
- oldfire();
- }
- };
- }
- hooks.unqueued++;
-
- anim.always( function() {
-
- // Ensure the complete handler is called before this completes
- anim.always( function() {
- hooks.unqueued--;
- if ( !jQuery.queue( elem, "fx" ).length ) {
- hooks.empty.fire();
- }
- } );
- } );
- }
-
- // Detect show/hide animations
- for ( prop in props ) {
- value = props[ prop ];
- if ( rfxtypes.test( value ) ) {
- delete props[ prop ];
- toggle = toggle || value === "toggle";
- if ( value === ( hidden ? "hide" : "show" ) ) {
-
- // Pretend to be hidden if this is a "show" and
- // there is still data from a stopped show/hide
- if ( value === "show" && dataShow && dataShow[ prop ] !== undefined ) {
- hidden = true;
-
- // Ignore all other no-op show/hide data
- } else {
- continue;
- }
- }
- orig[ prop ] = dataShow && dataShow[ prop ] || jQuery.style( elem, prop );
- }
- }
-
- // Bail out if this is a no-op like .hide().hide()
- propTween = !jQuery.isEmptyObject( props );
- if ( !propTween && jQuery.isEmptyObject( orig ) ) {
- return;
- }
-
- // Restrict "overflow" and "display" styles during box animations
- if ( isBox && elem.nodeType === 1 ) {
-
- // Support: IE <=9 - 11, Edge 12 - 13
- // Record all 3 overflow attributes because IE does not infer the shorthand
- // from identically-valued overflowX and overflowY
- opts.overflow = [ style.overflow, style.overflowX, style.overflowY ];
-
- // Identify a display type, preferring old show/hide data over the CSS cascade
- restoreDisplay = dataShow && dataShow.display;
- if ( restoreDisplay == null ) {
- restoreDisplay = dataPriv.get( elem, "display" );
- }
- display = jQuery.css( elem, "display" );
- if ( display === "none" ) {
- if ( restoreDisplay ) {
- display = restoreDisplay;
- } else {
-
- // Get nonempty value(s) by temporarily forcing visibility
- showHide( [ elem ], true );
- restoreDisplay = elem.style.display || restoreDisplay;
- display = jQuery.css( elem, "display" );
- showHide( [ elem ] );
- }
- }
-
- // Animate inline elements as inline-block
- if ( display === "inline" || display === "inline-block" && restoreDisplay != null ) {
- if ( jQuery.css( elem, "float" ) === "none" ) {
-
- // Restore the original display value at the end of pure show/hide animations
- if ( !propTween ) {
- anim.done( function() {
- style.display = restoreDisplay;
- } );
- if ( restoreDisplay == null ) {
- display = style.display;
- restoreDisplay = display === "none" ? "" : display;
- }
- }
- style.display = "inline-block";
- }
- }
- }
-
- if ( opts.overflow ) {
- style.overflow = "hidden";
- anim.always( function() {
- style.overflow = opts.overflow[ 0 ];
- style.overflowX = opts.overflow[ 1 ];
- style.overflowY = opts.overflow[ 2 ];
- } );
- }
-
- // Implement show/hide animations
- propTween = false;
- for ( prop in orig ) {
-
- // General show/hide setup for this element animation
- if ( !propTween ) {
- if ( dataShow ) {
- if ( "hidden" in dataShow ) {
- hidden = dataShow.hidden;
- }
- } else {
- dataShow = dataPriv.access( elem, "fxshow", { display: restoreDisplay } );
- }
-
- // Store hidden/visible for toggle so `.stop().toggle()` "reverses"
- if ( toggle ) {
- dataShow.hidden = !hidden;
- }
-
- // Show elements before animating them
- if ( hidden ) {
- showHide( [ elem ], true );
- }
-
- /* eslint-disable no-loop-func */
-
- anim.done( function() {
-
- /* eslint-enable no-loop-func */
-
- // The final step of a "hide" animation is actually hiding the element
- if ( !hidden ) {
- showHide( [ elem ] );
- }
- dataPriv.remove( elem, "fxshow" );
- for ( prop in orig ) {
- jQuery.style( elem, prop, orig[ prop ] );
- }
- } );
- }
-
- // Per-property setup
- propTween = createTween( hidden ? dataShow[ prop ] : 0, prop, anim );
- if ( !( prop in dataShow ) ) {
- dataShow[ prop ] = propTween.start;
- if ( hidden ) {
- propTween.end = propTween.start;
- propTween.start = 0;
- }
- }
- }
-}
-
-function propFilter( props, specialEasing ) {
- var index, name, easing, value, hooks;
-
- // camelCase, specialEasing and expand cssHook pass
- for ( index in props ) {
- name = jQuery.camelCase( index );
- easing = specialEasing[ name ];
- value = props[ index ];
- if ( Array.isArray( value ) ) {
- easing = value[ 1 ];
- value = props[ index ] = value[ 0 ];
- }
-
- if ( index !== name ) {
- props[ name ] = value;
- delete props[ index ];
- }
-
- hooks = jQuery.cssHooks[ name ];
- if ( hooks && "expand" in hooks ) {
- value = hooks.expand( value );
- delete props[ name ];
-
- // Not quite $.extend, this won't overwrite existing keys.
- // Reusing 'index' because we have the correct "name"
- for ( index in value ) {
- if ( !( index in props ) ) {
- props[ index ] = value[ index ];
- specialEasing[ index ] = easing;
- }
- }
- } else {
- specialEasing[ name ] = easing;
- }
- }
-}
-
-function Animation( elem, properties, options ) {
- var result,
- stopped,
- index = 0,
- length = Animation.prefilters.length,
- deferred = jQuery.Deferred().always( function() {
-
- // Don't match elem in the :animated selector
- delete tick.elem;
- } ),
- tick = function() {
- if ( stopped ) {
- return false;
- }
- var currentTime = fxNow || createFxNow(),
- remaining = Math.max( 0, animation.startTime + animation.duration - currentTime ),
-
- // Support: Android 2.3 only
- // Archaic crash bug won't allow us to use `1 - ( 0.5 || 0 )` (#12497)
- temp = remaining / animation.duration || 0,
- percent = 1 - temp,
- index = 0,
- length = animation.tweens.length;
-
- for ( ; index < length; index++ ) {
- animation.tweens[ index ].run( percent );
- }
-
- deferred.notifyWith( elem, [ animation, percent, remaining ] );
-
- // If there's more to do, yield
- if ( percent < 1 && length ) {
- return remaining;
- }
-
- // If this was an empty animation, synthesize a final progress notification
- if ( !length ) {
- deferred.notifyWith( elem, [ animation, 1, 0 ] );
- }
-
- // Resolve the animation and report its conclusion
- deferred.resolveWith( elem, [ animation ] );
- return false;
- },
- animation = deferred.promise( {
- elem: elem,
- props: jQuery.extend( {}, properties ),
- opts: jQuery.extend( true, {
- specialEasing: {},
- easing: jQuery.easing._default
- }, options ),
- originalProperties: properties,
- originalOptions: options,
- startTime: fxNow || createFxNow(),
- duration: options.duration,
- tweens: [],
- createTween: function( prop, end ) {
- var tween = jQuery.Tween( elem, animation.opts, prop, end,
- animation.opts.specialEasing[ prop ] || animation.opts.easing );
- animation.tweens.push( tween );
- return tween;
- },
- stop: function( gotoEnd ) {
- var index = 0,
-
- // If we are going to the end, we want to run all the tweens
- // otherwise we skip this part
- length = gotoEnd ? animation.tweens.length : 0;
- if ( stopped ) {
- return this;
- }
- stopped = true;
- for ( ; index < length; index++ ) {
- animation.tweens[ index ].run( 1 );
- }
-
- // Resolve when we played the last frame; otherwise, reject
- if ( gotoEnd ) {
- deferred.notifyWith( elem, [ animation, 1, 0 ] );
- deferred.resolveWith( elem, [ animation, gotoEnd ] );
- } else {
- deferred.rejectWith( elem, [ animation, gotoEnd ] );
- }
- return this;
- }
- } ),
- props = animation.props;
-
- propFilter( props, animation.opts.specialEasing );
-
- for ( ; index < length; index++ ) {
- result = Animation.prefilters[ index ].call( animation, elem, props, animation.opts );
- if ( result ) {
- if ( jQuery.isFunction( result.stop ) ) {
- jQuery._queueHooks( animation.elem, animation.opts.queue ).stop =
- jQuery.proxy( result.stop, result );
- }
- return result;
- }
- }
-
- jQuery.map( props, createTween, animation );
-
- if ( jQuery.isFunction( animation.opts.start ) ) {
- animation.opts.start.call( elem, animation );
- }
-
- // Attach callbacks from options
- animation
- .progress( animation.opts.progress )
- .done( animation.opts.done, animation.opts.complete )
- .fail( animation.opts.fail )
- .always( animation.opts.always );
-
- jQuery.fx.timer(
- jQuery.extend( tick, {
- elem: elem,
- anim: animation,
- queue: animation.opts.queue
- } )
- );
-
- return animation;
-}
-
-jQuery.Animation = jQuery.extend( Animation, {
-
- tweeners: {
- "*": [ function( prop, value ) {
- var tween = this.createTween( prop, value );
- adjustCSS( tween.elem, prop, rcssNum.exec( value ), tween );
- return tween;
- } ]
- },
-
- tweener: function( props, callback ) {
- if ( jQuery.isFunction( props ) ) {
- callback = props;
- props = [ "*" ];
- } else {
- props = props.match( rnothtmlwhite );
- }
-
- var prop,
- index = 0,
- length = props.length;
-
- for ( ; index < length; index++ ) {
- prop = props[ index ];
- Animation.tweeners[ prop ] = Animation.tweeners[ prop ] || [];
- Animation.tweeners[ prop ].unshift( callback );
- }
- },
-
- prefilters: [ defaultPrefilter ],
-
- prefilter: function( callback, prepend ) {
- if ( prepend ) {
- Animation.prefilters.unshift( callback );
- } else {
- Animation.prefilters.push( callback );
- }
- }
-} );
-
-jQuery.speed = function( speed, easing, fn ) {
- var opt = speed && typeof speed === "object" ? jQuery.extend( {}, speed ) : {
- complete: fn || !fn && easing ||
- jQuery.isFunction( speed ) && speed,
- duration: speed,
- easing: fn && easing || easing && !jQuery.isFunction( easing ) && easing
- };
-
- // Go to the end state if fx are off
- if ( jQuery.fx.off ) {
- opt.duration = 0;
-
- } else {
- if ( typeof opt.duration !== "number" ) {
- if ( opt.duration in jQuery.fx.speeds ) {
- opt.duration = jQuery.fx.speeds[ opt.duration ];
-
- } else {
- opt.duration = jQuery.fx.speeds._default;
- }
- }
- }
-
- // Normalize opt.queue - true/undefined/null -> "fx"
- if ( opt.queue == null || opt.queue === true ) {
- opt.queue = "fx";
- }
-
- // Queueing
- opt.old = opt.complete;
-
- opt.complete = function() {
- if ( jQuery.isFunction( opt.old ) ) {
- opt.old.call( this );
- }
-
- if ( opt.queue ) {
- jQuery.dequeue( this, opt.queue );
- }
- };
-
- return opt;
-};
-
-jQuery.fn.extend( {
- fadeTo: function( speed, to, easing, callback ) {
-
- // Show any hidden elements after setting opacity to 0
- return this.filter( isHiddenWithinTree ).css( "opacity", 0 ).show()
-
- // Animate to the value specified
- .end().animate( { opacity: to }, speed, easing, callback );
- },
- animate: function( prop, speed, easing, callback ) {
- var empty = jQuery.isEmptyObject( prop ),
- optall = jQuery.speed( speed, easing, callback ),
- doAnimation = function() {
-
- // Operate on a copy of prop so per-property easing won't be lost
- var anim = Animation( this, jQuery.extend( {}, prop ), optall );
-
- // Empty animations, or finishing resolves immediately
- if ( empty || dataPriv.get( this, "finish" ) ) {
- anim.stop( true );
- }
- };
- doAnimation.finish = doAnimation;
-
- return empty || optall.queue === false ?
- this.each( doAnimation ) :
- this.queue( optall.queue, doAnimation );
- },
- stop: function( type, clearQueue, gotoEnd ) {
- var stopQueue = function( hooks ) {
- var stop = hooks.stop;
- delete hooks.stop;
- stop( gotoEnd );
- };
-
- if ( typeof type !== "string" ) {
- gotoEnd = clearQueue;
- clearQueue = type;
- type = undefined;
- }
- if ( clearQueue && type !== false ) {
- this.queue( type || "fx", [] );
- }
-
- return this.each( function() {
- var dequeue = true,
- index = type != null && type + "queueHooks",
- timers = jQuery.timers,
- data = dataPriv.get( this );
-
- if ( index ) {
- if ( data[ index ] && data[ index ].stop ) {
- stopQueue( data[ index ] );
- }
- } else {
- for ( index in data ) {
- if ( data[ index ] && data[ index ].stop && rrun.test( index ) ) {
- stopQueue( data[ index ] );
- }
- }
- }
-
- for ( index = timers.length; index--; ) {
- if ( timers[ index ].elem === this &&
- ( type == null || timers[ index ].queue === type ) ) {
-
- timers[ index ].anim.stop( gotoEnd );
- dequeue = false;
- timers.splice( index, 1 );
- }
- }
-
- // Start the next in the queue if the last step wasn't forced.
- // Timers currently will call their complete callbacks, which
- // will dequeue but only if they were gotoEnd.
- if ( dequeue || !gotoEnd ) {
- jQuery.dequeue( this, type );
- }
- } );
- },
- finish: function( type ) {
- if ( type !== false ) {
- type = type || "fx";
- }
- return this.each( function() {
- var index,
- data = dataPriv.get( this ),
- queue = data[ type + "queue" ],
- hooks = data[ type + "queueHooks" ],
- timers = jQuery.timers,
- length = queue ? queue.length : 0;
-
- // Enable finishing flag on private data
- data.finish = true;
-
- // Empty the queue first
- jQuery.queue( this, type, [] );
-
- if ( hooks && hooks.stop ) {
- hooks.stop.call( this, true );
- }
-
- // Look for any active animations, and finish them
- for ( index = timers.length; index--; ) {
- if ( timers[ index ].elem === this && timers[ index ].queue === type ) {
- timers[ index ].anim.stop( true );
- timers.splice( index, 1 );
- }
- }
-
- // Look for any animations in the old queue and finish them
- for ( index = 0; index < length; index++ ) {
- if ( queue[ index ] && queue[ index ].finish ) {
- queue[ index ].finish.call( this );
- }
- }
-
- // Turn off finishing flag
- delete data.finish;
- } );
- }
-} );
-
-jQuery.each( [ "toggle", "show", "hide" ], function( i, name ) {
- var cssFn = jQuery.fn[ name ];
- jQuery.fn[ name ] = function( speed, easing, callback ) {
- return speed == null || typeof speed === "boolean" ?
- cssFn.apply( this, arguments ) :
- this.animate( genFx( name, true ), speed, easing, callback );
- };
-} );
-
-// Generate shortcuts for custom animations
-jQuery.each( {
- slideDown: genFx( "show" ),
- slideUp: genFx( "hide" ),
- slideToggle: genFx( "toggle" ),
- fadeIn: { opacity: "show" },
- fadeOut: { opacity: "hide" },
- fadeToggle: { opacity: "toggle" }
-}, function( name, props ) {
- jQuery.fn[ name ] = function( speed, easing, callback ) {
- return this.animate( props, speed, easing, callback );
- };
-} );
-
-jQuery.timers = [];
-jQuery.fx.tick = function() {
- var timer,
- i = 0,
- timers = jQuery.timers;
-
- fxNow = jQuery.now();
-
- for ( ; i < timers.length; i++ ) {
- timer = timers[ i ];
-
- // Run the timer and safely remove it when done (allowing for external removal)
- if ( !timer() && timers[ i ] === timer ) {
- timers.splice( i--, 1 );
- }
- }
-
- if ( !timers.length ) {
- jQuery.fx.stop();
- }
- fxNow = undefined;
-};
-
-jQuery.fx.timer = function( timer ) {
- jQuery.timers.push( timer );
- jQuery.fx.start();
-};
-
-jQuery.fx.interval = 13;
-jQuery.fx.start = function() {
- if ( inProgress ) {
- return;
- }
-
- inProgress = true;
- schedule();
-};
-
-jQuery.fx.stop = function() {
- inProgress = null;
-};
-
-jQuery.fx.speeds = {
- slow: 600,
- fast: 200,
-
- // Default speed
- _default: 400
-};
-
-
-// Based off of the plugin by Clint Helfers, with permission.
-// https://web.archive.org/web/20100324014747/http://blindsignals.com/index.php/2009/07/jquery-delay/
-jQuery.fn.delay = function( time, type ) {
- time = jQuery.fx ? jQuery.fx.speeds[ time ] || time : time;
- type = type || "fx";
-
- return this.queue( type, function( next, hooks ) {
- var timeout = window.setTimeout( next, time );
- hooks.stop = function() {
- window.clearTimeout( timeout );
- };
- } );
-};
-
-
-( function() {
- var input = document.createElement( "input" ),
- select = document.createElement( "select" ),
- opt = select.appendChild( document.createElement( "option" ) );
-
- input.type = "checkbox";
-
- // Support: Android <=4.3 only
- // Default value for a checkbox should be "on"
- support.checkOn = input.value !== "";
-
- // Support: IE <=11 only
- // Must access selectedIndex to make default options select
- support.optSelected = opt.selected;
-
- // Support: IE <=11 only
- // An input loses its value after becoming a radio
- input = document.createElement( "input" );
- input.value = "t";
- input.type = "radio";
- support.radioValue = input.value === "t";
-} )();
-
-
-var boolHook,
- attrHandle = jQuery.expr.attrHandle;
-
-jQuery.fn.extend( {
- attr: function( name, value ) {
- return access( this, jQuery.attr, name, value, arguments.length > 1 );
- },
-
- removeAttr: function( name ) {
- return this.each( function() {
- jQuery.removeAttr( this, name );
- } );
- }
-} );
-
-jQuery.extend( {
- attr: function( elem, name, value ) {
- var ret, hooks,
- nType = elem.nodeType;
-
- // Don't get/set attributes on text, comment and attribute nodes
- if ( nType === 3 || nType === 8 || nType === 2 ) {
- return;
- }
-
- // Fallback to prop when attributes are not supported
- if ( typeof elem.getAttribute === "undefined" ) {
- return jQuery.prop( elem, name, value );
- }
-
- // Attribute hooks are determined by the lowercase version
- // Grab necessary hook if one is defined
- if ( nType !== 1 || !jQuery.isXMLDoc( elem ) ) {
- hooks = jQuery.attrHooks[ name.toLowerCase() ] ||
- ( jQuery.expr.match.bool.test( name ) ? boolHook : undefined );
- }
-
- if ( value !== undefined ) {
- if ( value === null ) {
- jQuery.removeAttr( elem, name );
- return;
- }
-
- if ( hooks && "set" in hooks &&
- ( ret = hooks.set( elem, value, name ) ) !== undefined ) {
- return ret;
- }
-
- elem.setAttribute( name, value + "" );
- return value;
- }
-
- if ( hooks && "get" in hooks && ( ret = hooks.get( elem, name ) ) !== null ) {
- return ret;
- }
-
- ret = jQuery.find.attr( elem, name );
-
- // Non-existent attributes return null, we normalize to undefined
- return ret == null ? undefined : ret;
- },
-
- attrHooks: {
- type: {
- set: function( elem, value ) {
- if ( !support.radioValue && value === "radio" &&
- nodeName( elem, "input" ) ) {
- var val = elem.value;
- elem.setAttribute( "type", value );
- if ( val ) {
- elem.value = val;
- }
- return value;
- }
- }
- }
- },
-
- removeAttr: function( elem, value ) {
- var name,
- i = 0,
-
- // Attribute names can contain non-HTML whitespace characters
- // https://html.spec.whatwg.org/multipage/syntax.html#attributes-2
- attrNames = value && value.match( rnothtmlwhite );
-
- if ( attrNames && elem.nodeType === 1 ) {
- while ( ( name = attrNames[ i++ ] ) ) {
- elem.removeAttribute( name );
- }
- }
- }
-} );
-
-// Hooks for boolean attributes
-boolHook = {
- set: function( elem, value, name ) {
- if ( value === false ) {
-
- // Remove boolean attributes when set to false
- jQuery.removeAttr( elem, name );
- } else {
- elem.setAttribute( name, name );
- }
- return name;
- }
-};
-
-jQuery.each( jQuery.expr.match.bool.source.match( /\w+/g ), function( i, name ) {
- var getter = attrHandle[ name ] || jQuery.find.attr;
-
- attrHandle[ name ] = function( elem, name, isXML ) {
- var ret, handle,
- lowercaseName = name.toLowerCase();
-
- if ( !isXML ) {
-
- // Avoid an infinite loop by temporarily removing this function from the getter
- handle = attrHandle[ lowercaseName ];
- attrHandle[ lowercaseName ] = ret;
- ret = getter( elem, name, isXML ) != null ?
- lowercaseName :
- null;
- attrHandle[ lowercaseName ] = handle;
- }
- return ret;
- };
-} );
-
-
-
-
-var rfocusable = /^(?:input|select|textarea|button)$/i,
- rclickable = /^(?:a|area)$/i;
-
-jQuery.fn.extend( {
- prop: function( name, value ) {
- return access( this, jQuery.prop, name, value, arguments.length > 1 );
- },
-
- removeProp: function( name ) {
- return this.each( function() {
- delete this[ jQuery.propFix[ name ] || name ];
- } );
- }
-} );
-
-jQuery.extend( {
- prop: function( elem, name, value ) {
- var ret, hooks,
- nType = elem.nodeType;
-
- // Don't get/set properties on text, comment and attribute nodes
- if ( nType === 3 || nType === 8 || nType === 2 ) {
- return;
- }
-
- if ( nType !== 1 || !jQuery.isXMLDoc( elem ) ) {
-
- // Fix name and attach hooks
- name = jQuery.propFix[ name ] || name;
- hooks = jQuery.propHooks[ name ];
- }
-
- if ( value !== undefined ) {
- if ( hooks && "set" in hooks &&
- ( ret = hooks.set( elem, value, name ) ) !== undefined ) {
- return ret;
- }
-
- return ( elem[ name ] = value );
- }
-
- if ( hooks && "get" in hooks && ( ret = hooks.get( elem, name ) ) !== null ) {
- return ret;
- }
-
- return elem[ name ];
- },
-
- propHooks: {
- tabIndex: {
- get: function( elem ) {
-
- // Support: IE <=9 - 11 only
- // elem.tabIndex doesn't always return the
- // correct value when it hasn't been explicitly set
- // https://web.archive.org/web/20141116233347/http://fluidproject.org/blog/2008/01/09/getting-setting-and-removing-tabindex-values-with-javascript/
- // Use proper attribute retrieval(#12072)
- var tabindex = jQuery.find.attr( elem, "tabindex" );
-
- if ( tabindex ) {
- return parseInt( tabindex, 10 );
- }
-
- if (
- rfocusable.test( elem.nodeName ) ||
- rclickable.test( elem.nodeName ) &&
- elem.href
- ) {
- return 0;
- }
-
- return -1;
- }
- }
- },
-
- propFix: {
- "for": "htmlFor",
- "class": "className"
- }
-} );
-
-// Support: IE <=11 only
-// Accessing the selectedIndex property
-// forces the browser to respect setting selected
-// on the option
-// The getter ensures a default option is selected
-// when in an optgroup
-// eslint rule "no-unused-expressions" is disabled for this code
-// since it considers such accessions noop
-if ( !support.optSelected ) {
- jQuery.propHooks.selected = {
- get: function( elem ) {
-
- /* eslint no-unused-expressions: "off" */
-
- var parent = elem.parentNode;
- if ( parent && parent.parentNode ) {
- parent.parentNode.selectedIndex;
- }
- return null;
- },
- set: function( elem ) {
-
- /* eslint no-unused-expressions: "off" */
-
- var parent = elem.parentNode;
- if ( parent ) {
- parent.selectedIndex;
-
- if ( parent.parentNode ) {
- parent.parentNode.selectedIndex;
- }
- }
- }
- };
-}
-
-jQuery.each( [
- "tabIndex",
- "readOnly",
- "maxLength",
- "cellSpacing",
- "cellPadding",
- "rowSpan",
- "colSpan",
- "useMap",
- "frameBorder",
- "contentEditable"
-], function() {
- jQuery.propFix[ this.toLowerCase() ] = this;
-} );
-
-
-
-
- // Strip and collapse whitespace according to HTML spec
- // https://html.spec.whatwg.org/multipage/infrastructure.html#strip-and-collapse-whitespace
- function stripAndCollapse( value ) {
- var tokens = value.match( rnothtmlwhite ) || [];
- return tokens.join( " " );
- }
-
-
-function getClass( elem ) {
- return elem.getAttribute && elem.getAttribute( "class" ) || "";
-}
-
-jQuery.fn.extend( {
- addClass: function( value ) {
- var classes, elem, cur, curValue, clazz, j, finalValue,
- i = 0;
-
- if ( jQuery.isFunction( value ) ) {
- return this.each( function( j ) {
- jQuery( this ).addClass( value.call( this, j, getClass( this ) ) );
- } );
- }
-
- if ( typeof value === "string" && value ) {
- classes = value.match( rnothtmlwhite ) || [];
-
- while ( ( elem = this[ i++ ] ) ) {
- curValue = getClass( elem );
- cur = elem.nodeType === 1 && ( " " + stripAndCollapse( curValue ) + " " );
-
- if ( cur ) {
- j = 0;
- while ( ( clazz = classes[ j++ ] ) ) {
- if ( cur.indexOf( " " + clazz + " " ) < 0 ) {
- cur += clazz + " ";
- }
- }
-
- // Only assign if different to avoid unneeded rendering.
- finalValue = stripAndCollapse( cur );
- if ( curValue !== finalValue ) {
- elem.setAttribute( "class", finalValue );
- }
- }
- }
- }
-
- return this;
- },
-
- removeClass: function( value ) {
- var classes, elem, cur, curValue, clazz, j, finalValue,
- i = 0;
-
- if ( jQuery.isFunction( value ) ) {
- return this.each( function( j ) {
- jQuery( this ).removeClass( value.call( this, j, getClass( this ) ) );
- } );
- }
-
- if ( !arguments.length ) {
- return this.attr( "class", "" );
- }
-
- if ( typeof value === "string" && value ) {
- classes = value.match( rnothtmlwhite ) || [];
-
- while ( ( elem = this[ i++ ] ) ) {
- curValue = getClass( elem );
-
- // This expression is here for better compressibility (see addClass)
- cur = elem.nodeType === 1 && ( " " + stripAndCollapse( curValue ) + " " );
-
- if ( cur ) {
- j = 0;
- while ( ( clazz = classes[ j++ ] ) ) {
-
- // Remove *all* instances
- while ( cur.indexOf( " " + clazz + " " ) > -1 ) {
- cur = cur.replace( " " + clazz + " ", " " );
- }
- }
-
- // Only assign if different to avoid unneeded rendering.
- finalValue = stripAndCollapse( cur );
- if ( curValue !== finalValue ) {
- elem.setAttribute( "class", finalValue );
- }
- }
- }
- }
-
- return this;
- },
-
- toggleClass: function( value, stateVal ) {
- var type = typeof value;
-
- if ( typeof stateVal === "boolean" && type === "string" ) {
- return stateVal ? this.addClass( value ) : this.removeClass( value );
- }
-
- if ( jQuery.isFunction( value ) ) {
- return this.each( function( i ) {
- jQuery( this ).toggleClass(
- value.call( this, i, getClass( this ), stateVal ),
- stateVal
- );
- } );
- }
-
- return this.each( function() {
- var className, i, self, classNames;
-
- if ( type === "string" ) {
-
- // Toggle individual class names
- i = 0;
- self = jQuery( this );
- classNames = value.match( rnothtmlwhite ) || [];
-
- while ( ( className = classNames[ i++ ] ) ) {
-
- // Check each className given, space separated list
- if ( self.hasClass( className ) ) {
- self.removeClass( className );
- } else {
- self.addClass( className );
- }
- }
-
- // Toggle whole class name
- } else if ( value === undefined || type === "boolean" ) {
- className = getClass( this );
- if ( className ) {
-
- // Store className if set
- dataPriv.set( this, "__className__", className );
- }
-
- // If the element has a class name or if we're passed `false`,
- // then remove the whole classname (if there was one, the above saved it).
- // Otherwise bring back whatever was previously saved (if anything),
- // falling back to the empty string if nothing was stored.
- if ( this.setAttribute ) {
- this.setAttribute( "class",
- className || value === false ?
- "" :
- dataPriv.get( this, "__className__" ) || ""
- );
- }
- }
- } );
- },
-
- hasClass: function( selector ) {
- var className, elem,
- i = 0;
-
- className = " " + selector + " ";
- while ( ( elem = this[ i++ ] ) ) {
- if ( elem.nodeType === 1 &&
- ( " " + stripAndCollapse( getClass( elem ) ) + " " ).indexOf( className ) > -1 ) {
- return true;
- }
- }
-
- return false;
- }
-} );
-
-
-
-
-var rreturn = /\r/g;
-
-jQuery.fn.extend( {
- val: function( value ) {
- var hooks, ret, isFunction,
- elem = this[ 0 ];
-
- if ( !arguments.length ) {
- if ( elem ) {
- hooks = jQuery.valHooks[ elem.type ] ||
- jQuery.valHooks[ elem.nodeName.toLowerCase() ];
-
- if ( hooks &&
- "get" in hooks &&
- ( ret = hooks.get( elem, "value" ) ) !== undefined
- ) {
- return ret;
- }
-
- ret = elem.value;
-
- // Handle most common string cases
- if ( typeof ret === "string" ) {
- return ret.replace( rreturn, "" );
- }
-
- // Handle cases where value is null/undef or number
- return ret == null ? "" : ret;
- }
-
- return;
- }
-
- isFunction = jQuery.isFunction( value );
-
- return this.each( function( i ) {
- var val;
-
- if ( this.nodeType !== 1 ) {
- return;
- }
-
- if ( isFunction ) {
- val = value.call( this, i, jQuery( this ).val() );
- } else {
- val = value;
- }
-
- // Treat null/undefined as ""; convert numbers to string
- if ( val == null ) {
- val = "";
-
- } else if ( typeof val === "number" ) {
- val += "";
-
- } else if ( Array.isArray( val ) ) {
- val = jQuery.map( val, function( value ) {
- return value == null ? "" : value + "";
- } );
- }
-
- hooks = jQuery.valHooks[ this.type ] || jQuery.valHooks[ this.nodeName.toLowerCase() ];
-
- // If set returns undefined, fall back to normal setting
- if ( !hooks || !( "set" in hooks ) || hooks.set( this, val, "value" ) === undefined ) {
- this.value = val;
- }
- } );
- }
-} );
-
-jQuery.extend( {
- valHooks: {
- option: {
- get: function( elem ) {
-
- var val = jQuery.find.attr( elem, "value" );
- return val != null ?
- val :
-
- // Support: IE <=10 - 11 only
- // option.text throws exceptions (#14686, #14858)
- // Strip and collapse whitespace
- // https://html.spec.whatwg.org/#strip-and-collapse-whitespace
- stripAndCollapse( jQuery.text( elem ) );
- }
- },
- select: {
- get: function( elem ) {
- var value, option, i,
- options = elem.options,
- index = elem.selectedIndex,
- one = elem.type === "select-one",
- values = one ? null : [],
- max = one ? index + 1 : options.length;
-
- if ( index < 0 ) {
- i = max;
-
- } else {
- i = one ? index : 0;
- }
-
- // Loop through all the selected options
- for ( ; i < max; i++ ) {
- option = options[ i ];
-
- // Support: IE <=9 only
- // IE8-9 doesn't update selected after form reset (#2551)
- if ( ( option.selected || i === index ) &&
-
- // Don't return options that are disabled or in a disabled optgroup
- !option.disabled &&
- ( !option.parentNode.disabled ||
- !nodeName( option.parentNode, "optgroup" ) ) ) {
-
- // Get the specific value for the option
- value = jQuery( option ).val();
-
- // We don't need an array for one selects
- if ( one ) {
- return value;
- }
-
- // Multi-Selects return an array
- values.push( value );
- }
- }
-
- return values;
- },
-
- set: function( elem, value ) {
- var optionSet, option,
- options = elem.options,
- values = jQuery.makeArray( value ),
- i = options.length;
-
- while ( i-- ) {
- option = options[ i ];
-
- /* eslint-disable no-cond-assign */
-
- if ( option.selected =
- jQuery.inArray( jQuery.valHooks.option.get( option ), values ) > -1
- ) {
- optionSet = true;
- }
-
- /* eslint-enable no-cond-assign */
- }
-
- // Force browsers to behave consistently when non-matching value is set
- if ( !optionSet ) {
- elem.selectedIndex = -1;
- }
- return values;
- }
- }
- }
-} );
-
-// Radios and checkboxes getter/setter
-jQuery.each( [ "radio", "checkbox" ], function() {
- jQuery.valHooks[ this ] = {
- set: function( elem, value ) {
- if ( Array.isArray( value ) ) {
- return ( elem.checked = jQuery.inArray( jQuery( elem ).val(), value ) > -1 );
- }
- }
- };
- if ( !support.checkOn ) {
- jQuery.valHooks[ this ].get = function( elem ) {
- return elem.getAttribute( "value" ) === null ? "on" : elem.value;
- };
- }
-} );
-
-
-
-
-// Return jQuery for attributes-only inclusion
-
-
-var rfocusMorph = /^(?:focusinfocus|focusoutblur)$/;
-
-jQuery.extend( jQuery.event, {
-
- trigger: function( event, data, elem, onlyHandlers ) {
-
- var i, cur, tmp, bubbleType, ontype, handle, special,
- eventPath = [ elem || document ],
- type = hasOwn.call( event, "type" ) ? event.type : event,
- namespaces = hasOwn.call( event, "namespace" ) ? event.namespace.split( "." ) : [];
-
- cur = tmp = elem = elem || document;
-
- // Don't do events on text and comment nodes
- if ( elem.nodeType === 3 || elem.nodeType === 8 ) {
- return;
- }
-
- // focus/blur morphs to focusin/out; ensure we're not firing them right now
- if ( rfocusMorph.test( type + jQuery.event.triggered ) ) {
- return;
- }
-
- if ( type.indexOf( "." ) > -1 ) {
-
- // Namespaced trigger; create a regexp to match event type in handle()
- namespaces = type.split( "." );
- type = namespaces.shift();
- namespaces.sort();
- }
- ontype = type.indexOf( ":" ) < 0 && "on" + type;
-
- // Caller can pass in a jQuery.Event object, Object, or just an event type string
- event = event[ jQuery.expando ] ?
- event :
- new jQuery.Event( type, typeof event === "object" && event );
-
- // Trigger bitmask: & 1 for native handlers; & 2 for jQuery (always true)
- event.isTrigger = onlyHandlers ? 2 : 3;
- event.namespace = namespaces.join( "." );
- event.rnamespace = event.namespace ?
- new RegExp( "(^|\\.)" + namespaces.join( "\\.(?:.*\\.|)" ) + "(\\.|$)" ) :
- null;
-
- // Clean up the event in case it is being reused
- event.result = undefined;
- if ( !event.target ) {
- event.target = elem;
- }
-
- // Clone any incoming data and prepend the event, creating the handler arg list
- data = data == null ?
- [ event ] :
- jQuery.makeArray( data, [ event ] );
-
- // Allow special events to draw outside the lines
- special = jQuery.event.special[ type ] || {};
- if ( !onlyHandlers && special.trigger && special.trigger.apply( elem, data ) === false ) {
- return;
- }
-
- // Determine event propagation path in advance, per W3C events spec (#9951)
- // Bubble up to document, then to window; watch for a global ownerDocument var (#9724)
- if ( !onlyHandlers && !special.noBubble && !jQuery.isWindow( elem ) ) {
-
- bubbleType = special.delegateType || type;
- if ( !rfocusMorph.test( bubbleType + type ) ) {
- cur = cur.parentNode;
- }
- for ( ; cur; cur = cur.parentNode ) {
- eventPath.push( cur );
- tmp = cur;
- }
-
- // Only add window if we got to document (e.g., not plain obj or detached DOM)
- if ( tmp === ( elem.ownerDocument || document ) ) {
- eventPath.push( tmp.defaultView || tmp.parentWindow || window );
- }
- }
-
- // Fire handlers on the event path
- i = 0;
- while ( ( cur = eventPath[ i++ ] ) && !event.isPropagationStopped() ) {
-
- event.type = i > 1 ?
- bubbleType :
- special.bindType || type;
-
- // jQuery handler
- handle = ( dataPriv.get( cur, "events" ) || {} )[ event.type ] &&
- dataPriv.get( cur, "handle" );
- if ( handle ) {
- handle.apply( cur, data );
- }
-
- // Native handler
- handle = ontype && cur[ ontype ];
- if ( handle && handle.apply && acceptData( cur ) ) {
- event.result = handle.apply( cur, data );
- if ( event.result === false ) {
- event.preventDefault();
- }
- }
- }
- event.type = type;
-
- // If nobody prevented the default action, do it now
- if ( !onlyHandlers && !event.isDefaultPrevented() ) {
-
- if ( ( !special._default ||
- special._default.apply( eventPath.pop(), data ) === false ) &&
- acceptData( elem ) ) {
-
- // Call a native DOM method on the target with the same name as the event.
- // Don't do default actions on window, that's where global variables be (#6170)
- if ( ontype && jQuery.isFunction( elem[ type ] ) && !jQuery.isWindow( elem ) ) {
-
- // Don't re-trigger an onFOO event when we call its FOO() method
- tmp = elem[ ontype ];
-
- if ( tmp ) {
- elem[ ontype ] = null;
- }
-
- // Prevent re-triggering of the same event, since we already bubbled it above
- jQuery.event.triggered = type;
- elem[ type ]();
- jQuery.event.triggered = undefined;
-
- if ( tmp ) {
- elem[ ontype ] = tmp;
- }
- }
- }
- }
-
- return event.result;
- },
-
- // Piggyback on a donor event to simulate a different one
- // Used only for `focus(in | out)` events
- simulate: function( type, elem, event ) {
- var e = jQuery.extend(
- new jQuery.Event(),
- event,
- {
- type: type,
- isSimulated: true
- }
- );
-
- jQuery.event.trigger( e, null, elem );
- }
-
-} );
-
-jQuery.fn.extend( {
-
- trigger: function( type, data ) {
- return this.each( function() {
- jQuery.event.trigger( type, data, this );
- } );
- },
- triggerHandler: function( type, data ) {
- var elem = this[ 0 ];
- if ( elem ) {
- return jQuery.event.trigger( type, data, elem, true );
- }
- }
-} );
-
-
-jQuery.each( ( "blur focus focusin focusout resize scroll click dblclick " +
- "mousedown mouseup mousemove mouseover mouseout mouseenter mouseleave " +
- "change select submit keydown keypress keyup contextmenu" ).split( " " ),
- function( i, name ) {
-
- // Handle event binding
- jQuery.fn[ name ] = function( data, fn ) {
- return arguments.length > 0 ?
- this.on( name, null, data, fn ) :
- this.trigger( name );
- };
-} );
-
-jQuery.fn.extend( {
- hover: function( fnOver, fnOut ) {
- return this.mouseenter( fnOver ).mouseleave( fnOut || fnOver );
- }
-} );
-
-
-
-
-support.focusin = "onfocusin" in window;
-
-
-// Support: Firefox <=44
-// Firefox doesn't have focus(in | out) events
-// Related ticket - https://bugzilla.mozilla.org/show_bug.cgi?id=687787
-//
-// Support: Chrome <=48 - 49, Safari <=9.0 - 9.1
-// focus(in | out) events fire after focus & blur events,
-// which is spec violation - http://www.w3.org/TR/DOM-Level-3-Events/#events-focusevent-event-order
-// Related ticket - https://bugs.chromium.org/p/chromium/issues/detail?id=449857
-if ( !support.focusin ) {
- jQuery.each( { focus: "focusin", blur: "focusout" }, function( orig, fix ) {
-
- // Attach a single capturing handler on the document while someone wants focusin/focusout
- var handler = function( event ) {
- jQuery.event.simulate( fix, event.target, jQuery.event.fix( event ) );
- };
-
- jQuery.event.special[ fix ] = {
- setup: function() {
- var doc = this.ownerDocument || this,
- attaches = dataPriv.access( doc, fix );
-
- if ( !attaches ) {
- doc.addEventListener( orig, handler, true );
- }
- dataPriv.access( doc, fix, ( attaches || 0 ) + 1 );
- },
- teardown: function() {
- var doc = this.ownerDocument || this,
- attaches = dataPriv.access( doc, fix ) - 1;
-
- if ( !attaches ) {
- doc.removeEventListener( orig, handler, true );
- dataPriv.remove( doc, fix );
-
- } else {
- dataPriv.access( doc, fix, attaches );
- }
- }
- };
- } );
-}
-var location = window.location;
-
-var nonce = jQuery.now();
-
-var rquery = ( /\?/ );
-
-
-
-// Cross-browser xml parsing
-jQuery.parseXML = function( data ) {
- var xml;
- if ( !data || typeof data !== "string" ) {
- return null;
- }
-
- // Support: IE 9 - 11 only
- // IE throws on parseFromString with invalid input.
- try {
- xml = ( new window.DOMParser() ).parseFromString( data, "text/xml" );
- } catch ( e ) {
- xml = undefined;
- }
-
- if ( !xml || xml.getElementsByTagName( "parsererror" ).length ) {
- jQuery.error( "Invalid XML: " + data );
- }
- return xml;
-};
-
-
-var
- rbracket = /\[\]$/,
- rCRLF = /\r?\n/g,
- rsubmitterTypes = /^(?:submit|button|image|reset|file)$/i,
- rsubmittable = /^(?:input|select|textarea|keygen)/i;
-
-function buildParams( prefix, obj, traditional, add ) {
- var name;
-
- if ( Array.isArray( obj ) ) {
-
- // Serialize array item.
- jQuery.each( obj, function( i, v ) {
- if ( traditional || rbracket.test( prefix ) ) {
-
- // Treat each array item as a scalar.
- add( prefix, v );
-
- } else {
-
- // Item is non-scalar (array or object), encode its numeric index.
- buildParams(
- prefix + "[" + ( typeof v === "object" && v != null ? i : "" ) + "]",
- v,
- traditional,
- add
- );
- }
- } );
-
- } else if ( !traditional && jQuery.type( obj ) === "object" ) {
-
- // Serialize object item.
- for ( name in obj ) {
- buildParams( prefix + "[" + name + "]", obj[ name ], traditional, add );
- }
-
- } else {
-
- // Serialize scalar item.
- add( prefix, obj );
- }
-}
-
-// Serialize an array of form elements or a set of
-// key/values into a query string
-jQuery.param = function( a, traditional ) {
- var prefix,
- s = [],
- add = function( key, valueOrFunction ) {
-
- // If value is a function, invoke it and use its return value
- var value = jQuery.isFunction( valueOrFunction ) ?
- valueOrFunction() :
- valueOrFunction;
-
- s[ s.length ] = encodeURIComponent( key ) + "=" +
- encodeURIComponent( value == null ? "" : value );
- };
-
- // If an array was passed in, assume that it is an array of form elements.
- if ( Array.isArray( a ) || ( a.jquery && !jQuery.isPlainObject( a ) ) ) {
-
- // Serialize the form elements
- jQuery.each( a, function() {
- add( this.name, this.value );
- } );
-
- } else {
-
- // If traditional, encode the "old" way (the way 1.3.2 or older
- // did it), otherwise encode params recursively.
- for ( prefix in a ) {
- buildParams( prefix, a[ prefix ], traditional, add );
- }
- }
-
- // Return the resulting serialization
- return s.join( "&" );
-};
-
-jQuery.fn.extend( {
- serialize: function() {
- return jQuery.param( this.serializeArray() );
- },
- serializeArray: function() {
- return this.map( function() {
-
- // Can add propHook for "elements" to filter or add form elements
- var elements = jQuery.prop( this, "elements" );
- return elements ? jQuery.makeArray( elements ) : this;
- } )
- .filter( function() {
- var type = this.type;
-
- // Use .is( ":disabled" ) so that fieldset[disabled] works
- return this.name && !jQuery( this ).is( ":disabled" ) &&
- rsubmittable.test( this.nodeName ) && !rsubmitterTypes.test( type ) &&
- ( this.checked || !rcheckableType.test( type ) );
- } )
- .map( function( i, elem ) {
- var val = jQuery( this ).val();
-
- if ( val == null ) {
- return null;
- }
-
- if ( Array.isArray( val ) ) {
- return jQuery.map( val, function( val ) {
- return { name: elem.name, value: val.replace( rCRLF, "\r\n" ) };
- } );
- }
-
- return { name: elem.name, value: val.replace( rCRLF, "\r\n" ) };
- } ).get();
- }
-} );
-
-
-var
- r20 = /%20/g,
- rhash = /#.*$/,
- rantiCache = /([?&])_=[^&]*/,
- rheaders = /^(.*?):[ \t]*([^\r\n]*)$/mg,
-
- // #7653, #8125, #8152: local protocol detection
- rlocalProtocol = /^(?:about|app|app-storage|.+-extension|file|res|widget):$/,
- rnoContent = /^(?:GET|HEAD)$/,
- rprotocol = /^\/\//,
-
- /* Prefilters
- * 1) They are useful to introduce custom dataTypes (see ajax/jsonp.js for an example)
- * 2) These are called:
- * - BEFORE asking for a transport
- * - AFTER param serialization (s.data is a string if s.processData is true)
- * 3) key is the dataType
- * 4) the catchall symbol "*" can be used
- * 5) execution will start with transport dataType and THEN continue down to "*" if needed
- */
- prefilters = {},
-
- /* Transports bindings
- * 1) key is the dataType
- * 2) the catchall symbol "*" can be used
- * 3) selection will start with transport dataType and THEN go to "*" if needed
- */
- transports = {},
-
- // Avoid comment-prolog char sequence (#10098); must appease lint and evade compression
- allTypes = "*/".concat( "*" ),
-
- // Anchor tag for parsing the document origin
- originAnchor = document.createElement( "a" );
- originAnchor.href = location.href;
-
-// Base "constructor" for jQuery.ajaxPrefilter and jQuery.ajaxTransport
-function addToPrefiltersOrTransports( structure ) {
-
- // dataTypeExpression is optional and defaults to "*"
- return function( dataTypeExpression, func ) {
-
- if ( typeof dataTypeExpression !== "string" ) {
- func = dataTypeExpression;
- dataTypeExpression = "*";
- }
-
- var dataType,
- i = 0,
- dataTypes = dataTypeExpression.toLowerCase().match( rnothtmlwhite ) || [];
-
- if ( jQuery.isFunction( func ) ) {
-
- // For each dataType in the dataTypeExpression
- while ( ( dataType = dataTypes[ i++ ] ) ) {
-
- // Prepend if requested
- if ( dataType[ 0 ] === "+" ) {
- dataType = dataType.slice( 1 ) || "*";
- ( structure[ dataType ] = structure[ dataType ] || [] ).unshift( func );
-
- // Otherwise append
- } else {
- ( structure[ dataType ] = structure[ dataType ] || [] ).push( func );
- }
- }
- }
- };
-}
-
-// Base inspection function for prefilters and transports
-function inspectPrefiltersOrTransports( structure, options, originalOptions, jqXHR ) {
-
- var inspected = {},
- seekingTransport = ( structure === transports );
-
- function inspect( dataType ) {
- var selected;
- inspected[ dataType ] = true;
- jQuery.each( structure[ dataType ] || [], function( _, prefilterOrFactory ) {
- var dataTypeOrTransport = prefilterOrFactory( options, originalOptions, jqXHR );
- if ( typeof dataTypeOrTransport === "string" &&
- !seekingTransport && !inspected[ dataTypeOrTransport ] ) {
-
- options.dataTypes.unshift( dataTypeOrTransport );
- inspect( dataTypeOrTransport );
- return false;
- } else if ( seekingTransport ) {
- return !( selected = dataTypeOrTransport );
- }
- } );
- return selected;
- }
-
- return inspect( options.dataTypes[ 0 ] ) || !inspected[ "*" ] && inspect( "*" );
-}
-
-// A special extend for ajax options
-// that takes "flat" options (not to be deep extended)
-// Fixes #9887
-function ajaxExtend( target, src ) {
- var key, deep,
- flatOptions = jQuery.ajaxSettings.flatOptions || {};
-
- for ( key in src ) {
- if ( src[ key ] !== undefined ) {
- ( flatOptions[ key ] ? target : ( deep || ( deep = {} ) ) )[ key ] = src[ key ];
- }
- }
- if ( deep ) {
- jQuery.extend( true, target, deep );
- }
-
- return target;
-}
-
-/* Handles responses to an ajax request:
- * - finds the right dataType (mediates between content-type and expected dataType)
- * - returns the corresponding response
- */
-function ajaxHandleResponses( s, jqXHR, responses ) {
-
- var ct, type, finalDataType, firstDataType,
- contents = s.contents,
- dataTypes = s.dataTypes;
-
- // Remove auto dataType and get content-type in the process
- while ( dataTypes[ 0 ] === "*" ) {
- dataTypes.shift();
- if ( ct === undefined ) {
- ct = s.mimeType || jqXHR.getResponseHeader( "Content-Type" );
- }
- }
-
- // Check if we're dealing with a known content-type
- if ( ct ) {
- for ( type in contents ) {
- if ( contents[ type ] && contents[ type ].test( ct ) ) {
- dataTypes.unshift( type );
- break;
- }
- }
- }
-
- // Check to see if we have a response for the expected dataType
- if ( dataTypes[ 0 ] in responses ) {
- finalDataType = dataTypes[ 0 ];
- } else {
-
- // Try convertible dataTypes
- for ( type in responses ) {
- if ( !dataTypes[ 0 ] || s.converters[ type + " " + dataTypes[ 0 ] ] ) {
- finalDataType = type;
- break;
- }
- if ( !firstDataType ) {
- firstDataType = type;
- }
- }
-
- // Or just use first one
- finalDataType = finalDataType || firstDataType;
- }
-
- // If we found a dataType
- // We add the dataType to the list if needed
- // and return the corresponding response
- if ( finalDataType ) {
- if ( finalDataType !== dataTypes[ 0 ] ) {
- dataTypes.unshift( finalDataType );
- }
- return responses[ finalDataType ];
- }
-}
-
-/* Chain conversions given the request and the original response
- * Also sets the responseXXX fields on the jqXHR instance
- */
-function ajaxConvert( s, response, jqXHR, isSuccess ) {
- var conv2, current, conv, tmp, prev,
- converters = {},
-
- // Work with a copy of dataTypes in case we need to modify it for conversion
- dataTypes = s.dataTypes.slice();
-
- // Create converters map with lowercased keys
- if ( dataTypes[ 1 ] ) {
- for ( conv in s.converters ) {
- converters[ conv.toLowerCase() ] = s.converters[ conv ];
- }
- }
-
- current = dataTypes.shift();
-
- // Convert to each sequential dataType
- while ( current ) {
-
- if ( s.responseFields[ current ] ) {
- jqXHR[ s.responseFields[ current ] ] = response;
- }
-
- // Apply the dataFilter if provided
- if ( !prev && isSuccess && s.dataFilter ) {
- response = s.dataFilter( response, s.dataType );
- }
-
- prev = current;
- current = dataTypes.shift();
-
- if ( current ) {
-
- // There's only work to do if current dataType is non-auto
- if ( current === "*" ) {
-
- current = prev;
-
- // Convert response if prev dataType is non-auto and differs from current
- } else if ( prev !== "*" && prev !== current ) {
-
- // Seek a direct converter
- conv = converters[ prev + " " + current ] || converters[ "* " + current ];
-
- // If none found, seek a pair
- if ( !conv ) {
- for ( conv2 in converters ) {
-
- // If conv2 outputs current
- tmp = conv2.split( " " );
- if ( tmp[ 1 ] === current ) {
-
- // If prev can be converted to accepted input
- conv = converters[ prev + " " + tmp[ 0 ] ] ||
- converters[ "* " + tmp[ 0 ] ];
- if ( conv ) {
-
- // Condense equivalence converters
- if ( conv === true ) {
- conv = converters[ conv2 ];
-
- // Otherwise, insert the intermediate dataType
- } else if ( converters[ conv2 ] !== true ) {
- current = tmp[ 0 ];
- dataTypes.unshift( tmp[ 1 ] );
- }
- break;
- }
- }
- }
- }
-
- // Apply converter (if not an equivalence)
- if ( conv !== true ) {
-
- // Unless errors are allowed to bubble, catch and return them
- if ( conv && s.throws ) {
- response = conv( response );
- } else {
- try {
- response = conv( response );
- } catch ( e ) {
- return {
- state: "parsererror",
- error: conv ? e : "No conversion from " + prev + " to " + current
- };
- }
- }
- }
- }
- }
- }
-
- return { state: "success", data: response };
-}
-
-jQuery.extend( {
-
- // Counter for holding the number of active queries
- active: 0,
-
- // Last-Modified header cache for next request
- lastModified: {},
- etag: {},
-
- ajaxSettings: {
- url: location.href,
- type: "GET",
- isLocal: rlocalProtocol.test( location.protocol ),
- global: true,
- processData: true,
- async: true,
- contentType: "application/x-www-form-urlencoded; charset=UTF-8",
-
- /*
- timeout: 0,
- data: null,
- dataType: null,
- username: null,
- password: null,
- cache: null,
- throws: false,
- traditional: false,
- headers: {},
- */
-
- accepts: {
- "*": allTypes,
- text: "text/plain",
- html: "text/html",
- xml: "application/xml, text/xml",
- json: "application/json, text/javascript"
- },
-
- contents: {
- xml: /\bxml\b/,
- html: /\bhtml/,
- json: /\bjson\b/
- },
-
- responseFields: {
- xml: "responseXML",
- text: "responseText",
- json: "responseJSON"
- },
-
- // Data converters
- // Keys separate source (or catchall "*") and destination types with a single space
- converters: {
-
- // Convert anything to text
- "* text": String,
-
- // Text to html (true = no transformation)
- "text html": true,
-
- // Evaluate text as a json expression
- "text json": JSON.parse,
-
- // Parse text as xml
- "text xml": jQuery.parseXML
- },
-
- // For options that shouldn't be deep extended:
- // you can add your own custom options here if
- // and when you create one that shouldn't be
- // deep extended (see ajaxExtend)
- flatOptions: {
- url: true,
- context: true
- }
- },
-
- // Creates a full fledged settings object into target
- // with both ajaxSettings and settings fields.
- // If target is omitted, writes into ajaxSettings.
- ajaxSetup: function( target, settings ) {
- return settings ?
-
- // Building a settings object
- ajaxExtend( ajaxExtend( target, jQuery.ajaxSettings ), settings ) :
-
- // Extending ajaxSettings
- ajaxExtend( jQuery.ajaxSettings, target );
- },
-
- ajaxPrefilter: addToPrefiltersOrTransports( prefilters ),
- ajaxTransport: addToPrefiltersOrTransports( transports ),
-
- // Main method
- ajax: function( url, options ) {
-
- // If url is an object, simulate pre-1.5 signature
- if ( typeof url === "object" ) {
- options = url;
- url = undefined;
- }
-
- // Force options to be an object
- options = options || {};
-
- var transport,
-
- // URL without anti-cache param
- cacheURL,
-
- // Response headers
- responseHeadersString,
- responseHeaders,
-
- // timeout handle
- timeoutTimer,
-
- // Url cleanup var
- urlAnchor,
-
- // Request state (becomes false upon send and true upon completion)
- completed,
-
- // To know if global events are to be dispatched
- fireGlobals,
-
- // Loop variable
- i,
-
- // uncached part of the url
- uncached,
-
- // Create the final options object
- s = jQuery.ajaxSetup( {}, options ),
-
- // Callbacks context
- callbackContext = s.context || s,
-
- // Context for global events is callbackContext if it is a DOM node or jQuery collection
- globalEventContext = s.context &&
- ( callbackContext.nodeType || callbackContext.jquery ) ?
- jQuery( callbackContext ) :
- jQuery.event,
-
- // Deferreds
- deferred = jQuery.Deferred(),
- completeDeferred = jQuery.Callbacks( "once memory" ),
-
- // Status-dependent callbacks
- statusCode = s.statusCode || {},
-
- // Headers (they are sent all at once)
- requestHeaders = {},
- requestHeadersNames = {},
-
- // Default abort message
- strAbort = "canceled",
-
- // Fake xhr
- jqXHR = {
- readyState: 0,
-
- // Builds headers hashtable if needed
- getResponseHeader: function( key ) {
- var match;
- if ( completed ) {
- if ( !responseHeaders ) {
- responseHeaders = {};
- while ( ( match = rheaders.exec( responseHeadersString ) ) ) {
- responseHeaders[ match[ 1 ].toLowerCase() ] = match[ 2 ];
- }
- }
- match = responseHeaders[ key.toLowerCase() ];
- }
- return match == null ? null : match;
- },
-
- // Raw string
- getAllResponseHeaders: function() {
- return completed ? responseHeadersString : null;
- },
-
- // Caches the header
- setRequestHeader: function( name, value ) {
- if ( completed == null ) {
- name = requestHeadersNames[ name.toLowerCase() ] =
- requestHeadersNames[ name.toLowerCase() ] || name;
- requestHeaders[ name ] = value;
- }
- return this;
- },
-
- // Overrides response content-type header
- overrideMimeType: function( type ) {
- if ( completed == null ) {
- s.mimeType = type;
- }
- return this;
- },
-
- // Status-dependent callbacks
- statusCode: function( map ) {
- var code;
- if ( map ) {
- if ( completed ) {
-
- // Execute the appropriate callbacks
- jqXHR.always( map[ jqXHR.status ] );
- } else {
-
- // Lazy-add the new callbacks in a way that preserves old ones
- for ( code in map ) {
- statusCode[ code ] = [ statusCode[ code ], map[ code ] ];
- }
- }
- }
- return this;
- },
-
- // Cancel the request
- abort: function( statusText ) {
- var finalText = statusText || strAbort;
- if ( transport ) {
- transport.abort( finalText );
- }
- done( 0, finalText );
- return this;
- }
- };
-
- // Attach deferreds
- deferred.promise( jqXHR );
-
- // Add protocol if not provided (prefilters might expect it)
- // Handle falsy url in the settings object (#10093: consistency with old signature)
- // We also use the url parameter if available
- s.url = ( ( url || s.url || location.href ) + "" )
- .replace( rprotocol, location.protocol + "//" );
-
- // Alias method option to type as per ticket #12004
- s.type = options.method || options.type || s.method || s.type;
-
- // Extract dataTypes list
- s.dataTypes = ( s.dataType || "*" ).toLowerCase().match( rnothtmlwhite ) || [ "" ];
-
- // A cross-domain request is in order when the origin doesn't match the current origin.
- if ( s.crossDomain == null ) {
- urlAnchor = document.createElement( "a" );
-
- // Support: IE <=8 - 11, Edge 12 - 13
- // IE throws exception on accessing the href property if url is malformed,
- // e.g. http://example.com:80x/
- try {
- urlAnchor.href = s.url;
-
- // Support: IE <=8 - 11 only
- // Anchor's host property isn't correctly set when s.url is relative
- urlAnchor.href = urlAnchor.href;
- s.crossDomain = originAnchor.protocol + "//" + originAnchor.host !==
- urlAnchor.protocol + "//" + urlAnchor.host;
- } catch ( e ) {
-
- // If there is an error parsing the URL, assume it is crossDomain,
- // it can be rejected by the transport if it is invalid
- s.crossDomain = true;
- }
- }
-
- // Convert data if not already a string
- if ( s.data && s.processData && typeof s.data !== "string" ) {
- s.data = jQuery.param( s.data, s.traditional );
- }
-
- // Apply prefilters
- inspectPrefiltersOrTransports( prefilters, s, options, jqXHR );
-
- // If request was aborted inside a prefilter, stop there
- if ( completed ) {
- return jqXHR;
- }
-
- // We can fire global events as of now if asked to
- // Don't fire events if jQuery.event is undefined in an AMD-usage scenario (#15118)
- fireGlobals = jQuery.event && s.global;
-
- // Watch for a new set of requests
- if ( fireGlobals && jQuery.active++ === 0 ) {
- jQuery.event.trigger( "ajaxStart" );
- }
-
- // Uppercase the type
- s.type = s.type.toUpperCase();
-
- // Determine if request has content
- s.hasContent = !rnoContent.test( s.type );
-
- // Save the URL in case we're toying with the If-Modified-Since
- // and/or If-None-Match header later on
- // Remove hash to simplify url manipulation
- cacheURL = s.url.replace( rhash, "" );
-
- // More options handling for requests with no content
- if ( !s.hasContent ) {
-
- // Remember the hash so we can put it back
- uncached = s.url.slice( cacheURL.length );
-
- // If data is available, append data to url
- if ( s.data ) {
- cacheURL += ( rquery.test( cacheURL ) ? "&" : "?" ) + s.data;
-
- // #9682: remove data so that it's not used in an eventual retry
- delete s.data;
- }
-
- // Add or update anti-cache param if needed
- if ( s.cache === false ) {
- cacheURL = cacheURL.replace( rantiCache, "$1" );
- uncached = ( rquery.test( cacheURL ) ? "&" : "?" ) + "_=" + ( nonce++ ) + uncached;
- }
-
- // Put hash and anti-cache on the URL that will be requested (gh-1732)
- s.url = cacheURL + uncached;
-
- // Change '%20' to '+' if this is encoded form body content (gh-2658)
- } else if ( s.data && s.processData &&
- ( s.contentType || "" ).indexOf( "application/x-www-form-urlencoded" ) === 0 ) {
- s.data = s.data.replace( r20, "+" );
- }
-
- // Set the If-Modified-Since and/or If-None-Match header, if in ifModified mode.
- if ( s.ifModified ) {
- if ( jQuery.lastModified[ cacheURL ] ) {
- jqXHR.setRequestHeader( "If-Modified-Since", jQuery.lastModified[ cacheURL ] );
- }
- if ( jQuery.etag[ cacheURL ] ) {
- jqXHR.setRequestHeader( "If-None-Match", jQuery.etag[ cacheURL ] );
- }
- }
-
- // Set the correct header, if data is being sent
- if ( s.data && s.hasContent && s.contentType !== false || options.contentType ) {
- jqXHR.setRequestHeader( "Content-Type", s.contentType );
- }
-
- // Set the Accepts header for the server, depending on the dataType
- jqXHR.setRequestHeader(
- "Accept",
- s.dataTypes[ 0 ] && s.accepts[ s.dataTypes[ 0 ] ] ?
- s.accepts[ s.dataTypes[ 0 ] ] +
- ( s.dataTypes[ 0 ] !== "*" ? ", " + allTypes + "; q=0.01" : "" ) :
- s.accepts[ "*" ]
- );
-
- // Check for headers option
- for ( i in s.headers ) {
- jqXHR.setRequestHeader( i, s.headers[ i ] );
- }
-
- // Allow custom headers/mimetypes and early abort
- if ( s.beforeSend &&
- ( s.beforeSend.call( callbackContext, jqXHR, s ) === false || completed ) ) {
-
- // Abort if not done already and return
- return jqXHR.abort();
- }
-
- // Aborting is no longer a cancellation
- strAbort = "abort";
-
- // Install callbacks on deferreds
- completeDeferred.add( s.complete );
- jqXHR.done( s.success );
- jqXHR.fail( s.error );
-
- // Get transport
- transport = inspectPrefiltersOrTransports( transports, s, options, jqXHR );
-
- // If no transport, we auto-abort
- if ( !transport ) {
- done( -1, "No Transport" );
- } else {
- jqXHR.readyState = 1;
-
- // Send global event
- if ( fireGlobals ) {
- globalEventContext.trigger( "ajaxSend", [ jqXHR, s ] );
- }
-
- // If request was aborted inside ajaxSend, stop there
- if ( completed ) {
- return jqXHR;
- }
-
- // Timeout
- if ( s.async && s.timeout > 0 ) {
- timeoutTimer = window.setTimeout( function() {
- jqXHR.abort( "timeout" );
- }, s.timeout );
- }
-
- try {
- completed = false;
- transport.send( requestHeaders, done );
- } catch ( e ) {
-
- // Rethrow post-completion exceptions
- if ( completed ) {
- throw e;
- }
-
- // Propagate others as results
- done( -1, e );
- }
- }
-
- // Callback for when everything is done
- function done( status, nativeStatusText, responses, headers ) {
- var isSuccess, success, error, response, modified,
- statusText = nativeStatusText;
-
- // Ignore repeat invocations
- if ( completed ) {
- return;
- }
-
- completed = true;
-
- // Clear timeout if it exists
- if ( timeoutTimer ) {
- window.clearTimeout( timeoutTimer );
- }
-
- // Dereference transport for early garbage collection
- // (no matter how long the jqXHR object will be used)
- transport = undefined;
-
- // Cache response headers
- responseHeadersString = headers || "";
-
- // Set readyState
- jqXHR.readyState = status > 0 ? 4 : 0;
-
- // Determine if successful
- isSuccess = status >= 200 && status < 300 || status === 304;
-
- // Get response data
- if ( responses ) {
- response = ajaxHandleResponses( s, jqXHR, responses );
- }
-
- // Convert no matter what (that way responseXXX fields are always set)
- response = ajaxConvert( s, response, jqXHR, isSuccess );
-
- // If successful, handle type chaining
- if ( isSuccess ) {
-
- // Set the If-Modified-Since and/or If-None-Match header, if in ifModified mode.
- if ( s.ifModified ) {
- modified = jqXHR.getResponseHeader( "Last-Modified" );
- if ( modified ) {
- jQuery.lastModified[ cacheURL ] = modified;
- }
- modified = jqXHR.getResponseHeader( "etag" );
- if ( modified ) {
- jQuery.etag[ cacheURL ] = modified;
- }
- }
-
- // if no content
- if ( status === 204 || s.type === "HEAD" ) {
- statusText = "nocontent";
-
- // if not modified
- } else if ( status === 304 ) {
- statusText = "notmodified";
-
- // If we have data, let's convert it
- } else {
- statusText = response.state;
- success = response.data;
- error = response.error;
- isSuccess = !error;
- }
- } else {
-
- // Extract error from statusText and normalize for non-aborts
- error = statusText;
- if ( status || !statusText ) {
- statusText = "error";
- if ( status < 0 ) {
- status = 0;
- }
- }
- }
-
- // Set data for the fake xhr object
- jqXHR.status = status;
- jqXHR.statusText = ( nativeStatusText || statusText ) + "";
-
- // Success/Error
- if ( isSuccess ) {
- deferred.resolveWith( callbackContext, [ success, statusText, jqXHR ] );
- } else {
- deferred.rejectWith( callbackContext, [ jqXHR, statusText, error ] );
- }
-
- // Status-dependent callbacks
- jqXHR.statusCode( statusCode );
- statusCode = undefined;
-
- if ( fireGlobals ) {
- globalEventContext.trigger( isSuccess ? "ajaxSuccess" : "ajaxError",
- [ jqXHR, s, isSuccess ? success : error ] );
- }
-
- // Complete
- completeDeferred.fireWith( callbackContext, [ jqXHR, statusText ] );
-
- if ( fireGlobals ) {
- globalEventContext.trigger( "ajaxComplete", [ jqXHR, s ] );
-
- // Handle the global AJAX counter
- if ( !( --jQuery.active ) ) {
- jQuery.event.trigger( "ajaxStop" );
- }
- }
- }
-
- return jqXHR;
- },
-
- getJSON: function( url, data, callback ) {
- return jQuery.get( url, data, callback, "json" );
- },
-
- getScript: function( url, callback ) {
- return jQuery.get( url, undefined, callback, "script" );
- }
-} );
-
-jQuery.each( [ "get", "post" ], function( i, method ) {
- jQuery[ method ] = function( url, data, callback, type ) {
-
- // Shift arguments if data argument was omitted
- if ( jQuery.isFunction( data ) ) {
- type = type || callback;
- callback = data;
- data = undefined;
- }
-
- // The url can be an options object (which then must have .url)
- return jQuery.ajax( jQuery.extend( {
- url: url,
- type: method,
- dataType: type,
- data: data,
- success: callback
- }, jQuery.isPlainObject( url ) && url ) );
- };
-} );
-
-
-jQuery._evalUrl = function( url ) {
- return jQuery.ajax( {
- url: url,
-
- // Make this explicit, since user can override this through ajaxSetup (#11264)
- type: "GET",
- dataType: "script",
- cache: true,
- async: false,
- global: false,
- "throws": true
- } );
-};
-
-
-jQuery.fn.extend( {
- wrapAll: function( html ) {
- var wrap;
-
- if ( this[ 0 ] ) {
- if ( jQuery.isFunction( html ) ) {
- html = html.call( this[ 0 ] );
- }
-
- // The elements to wrap the target around
- wrap = jQuery( html, this[ 0 ].ownerDocument ).eq( 0 ).clone( true );
-
- if ( this[ 0 ].parentNode ) {
- wrap.insertBefore( this[ 0 ] );
- }
-
- wrap.map( function() {
- var elem = this;
-
- while ( elem.firstElementChild ) {
- elem = elem.firstElementChild;
- }
-
- return elem;
- } ).append( this );
- }
-
- return this;
- },
-
- wrapInner: function( html ) {
- if ( jQuery.isFunction( html ) ) {
- return this.each( function( i ) {
- jQuery( this ).wrapInner( html.call( this, i ) );
- } );
- }
-
- return this.each( function() {
- var self = jQuery( this ),
- contents = self.contents();
-
- if ( contents.length ) {
- contents.wrapAll( html );
-
- } else {
- self.append( html );
- }
- } );
- },
-
- wrap: function( html ) {
- var isFunction = jQuery.isFunction( html );
-
- return this.each( function( i ) {
- jQuery( this ).wrapAll( isFunction ? html.call( this, i ) : html );
- } );
- },
-
- unwrap: function( selector ) {
- this.parent( selector ).not( "body" ).each( function() {
- jQuery( this ).replaceWith( this.childNodes );
- } );
- return this;
- }
-} );
-
-
-jQuery.expr.pseudos.hidden = function( elem ) {
- return !jQuery.expr.pseudos.visible( elem );
-};
-jQuery.expr.pseudos.visible = function( elem ) {
- return !!( elem.offsetWidth || elem.offsetHeight || elem.getClientRects().length );
-};
-
-
-
-
-jQuery.ajaxSettings.xhr = function() {
- try {
- return new window.XMLHttpRequest();
- } catch ( e ) {}
-};
-
-var xhrSuccessStatus = {
-
- // File protocol always yields status code 0, assume 200
- 0: 200,
-
- // Support: IE <=9 only
- // #1450: sometimes IE returns 1223 when it should be 204
- 1223: 204
- },
- xhrSupported = jQuery.ajaxSettings.xhr();
-
-support.cors = !!xhrSupported && ( "withCredentials" in xhrSupported );
-support.ajax = xhrSupported = !!xhrSupported;
-
-jQuery.ajaxTransport( function( options ) {
- var callback, errorCallback;
-
- // Cross domain only allowed if supported through XMLHttpRequest
- if ( support.cors || xhrSupported && !options.crossDomain ) {
- return {
- send: function( headers, complete ) {
- var i,
- xhr = options.xhr();
-
- xhr.open(
- options.type,
- options.url,
- options.async,
- options.username,
- options.password
- );
-
- // Apply custom fields if provided
- if ( options.xhrFields ) {
- for ( i in options.xhrFields ) {
- xhr[ i ] = options.xhrFields[ i ];
- }
- }
-
- // Override mime type if needed
- if ( options.mimeType && xhr.overrideMimeType ) {
- xhr.overrideMimeType( options.mimeType );
- }
-
- // X-Requested-With header
- // For cross-domain requests, seeing as conditions for a preflight are
- // akin to a jigsaw puzzle, we simply never set it to be sure.
- // (it can always be set on a per-request basis or even using ajaxSetup)
- // For same-domain requests, won't change header if already provided.
- if ( !options.crossDomain && !headers[ "X-Requested-With" ] ) {
- headers[ "X-Requested-With" ] = "XMLHttpRequest";
- }
-
- // Set headers
- for ( i in headers ) {
- xhr.setRequestHeader( i, headers[ i ] );
- }
-
- // Callback
- callback = function( type ) {
- return function() {
- if ( callback ) {
- callback = errorCallback = xhr.onload =
- xhr.onerror = xhr.onabort = xhr.onreadystatechange = null;
-
- if ( type === "abort" ) {
- xhr.abort();
- } else if ( type === "error" ) {
-
- // Support: IE <=9 only
- // On a manual native abort, IE9 throws
- // errors on any property access that is not readyState
- if ( typeof xhr.status !== "number" ) {
- complete( 0, "error" );
- } else {
- complete(
-
- // File: protocol always yields status 0; see #8605, #14207
- xhr.status,
- xhr.statusText
- );
- }
- } else {
- complete(
- xhrSuccessStatus[ xhr.status ] || xhr.status,
- xhr.statusText,
-
- // Support: IE <=9 only
- // IE9 has no XHR2 but throws on binary (trac-11426)
- // For XHR2 non-text, let the caller handle it (gh-2498)
- ( xhr.responseType || "text" ) !== "text" ||
- typeof xhr.responseText !== "string" ?
- { binary: xhr.response } :
- { text: xhr.responseText },
- xhr.getAllResponseHeaders()
- );
- }
- }
- };
- };
-
- // Listen to events
- xhr.onload = callback();
- errorCallback = xhr.onerror = callback( "error" );
-
- // Support: IE 9 only
- // Use onreadystatechange to replace onabort
- // to handle uncaught aborts
- if ( xhr.onabort !== undefined ) {
- xhr.onabort = errorCallback;
- } else {
- xhr.onreadystatechange = function() {
-
- // Check readyState before timeout as it changes
- if ( xhr.readyState === 4 ) {
-
- // Allow onerror to be called first,
- // but that will not handle a native abort
- // Also, save errorCallback to a variable
- // as xhr.onerror cannot be accessed
- window.setTimeout( function() {
- if ( callback ) {
- errorCallback();
- }
- } );
- }
- };
- }
-
- // Create the abort callback
- callback = callback( "abort" );
-
- try {
-
- // Do send the request (this may raise an exception)
- xhr.send( options.hasContent && options.data || null );
- } catch ( e ) {
-
- // #14683: Only rethrow if this hasn't been notified as an error yet
- if ( callback ) {
- throw e;
- }
- }
- },
-
- abort: function() {
- if ( callback ) {
- callback();
- }
- }
- };
- }
-} );
-
-
-
-
-// Prevent auto-execution of scripts when no explicit dataType was provided (See gh-2432)
-jQuery.ajaxPrefilter( function( s ) {
- if ( s.crossDomain ) {
- s.contents.script = false;
- }
-} );
-
-// Install script dataType
-jQuery.ajaxSetup( {
- accepts: {
- script: "text/javascript, application/javascript, " +
- "application/ecmascript, application/x-ecmascript"
- },
- contents: {
- script: /\b(?:java|ecma)script\b/
- },
- converters: {
- "text script": function( text ) {
- jQuery.globalEval( text );
- return text;
- }
- }
-} );
-
-// Handle cache's special case and crossDomain
-jQuery.ajaxPrefilter( "script", function( s ) {
- if ( s.cache === undefined ) {
- s.cache = false;
- }
- if ( s.crossDomain ) {
- s.type = "GET";
- }
-} );
-
-// Bind script tag hack transport
-jQuery.ajaxTransport( "script", function( s ) {
-
- // This transport only deals with cross domain requests
- if ( s.crossDomain ) {
- var script, callback;
- return {
- send: function( _, complete ) {
- script = jQuery( "<script>" ).prop( {
- charset: s.scriptCharset,
- src: s.url
- } ).on(
- "load error",
- callback = function( evt ) {
- script.remove();
- callback = null;
- if ( evt ) {
- complete( evt.type === "error" ? 404 : 200, evt.type );
- }
- }
- );
-
- // Use native DOM manipulation to avoid our domManip AJAX trickery
- document.head.appendChild( script[ 0 ] );
- },
- abort: function() {
- if ( callback ) {
- callback();
- }
- }
- };
- }
-} );
-
-
-
-
-var oldCallbacks = [],
- rjsonp = /(=)\?(?=&|$)|\?\?/;
-
-// Default jsonp settings
-jQuery.ajaxSetup( {
- jsonp: "callback",
- jsonpCallback: function() {
- var callback = oldCallbacks.pop() || ( jQuery.expando + "_" + ( nonce++ ) );
- this[ callback ] = true;
- return callback;
- }
-} );
-
-// Detect, normalize options and install callbacks for jsonp requests
-jQuery.ajaxPrefilter( "json jsonp", function( s, originalSettings, jqXHR ) {
-
- var callbackName, overwritten, responseContainer,
- jsonProp = s.jsonp !== false && ( rjsonp.test( s.url ) ?
- "url" :
- typeof s.data === "string" &&
- ( s.contentType || "" )
- .indexOf( "application/x-www-form-urlencoded" ) === 0 &&
- rjsonp.test( s.data ) && "data"
- );
-
- // Handle iff the expected data type is "jsonp" or we have a parameter to set
- if ( jsonProp || s.dataTypes[ 0 ] === "jsonp" ) {
-
- // Get callback name, remembering preexisting value associated with it
- callbackName = s.jsonpCallback = jQuery.isFunction( s.jsonpCallback ) ?
- s.jsonpCallback() :
- s.jsonpCallback;
-
- // Insert callback into url or form data
- if ( jsonProp ) {
- s[ jsonProp ] = s[ jsonProp ].replace( rjsonp, "$1" + callbackName );
- } else if ( s.jsonp !== false ) {
- s.url += ( rquery.test( s.url ) ? "&" : "?" ) + s.jsonp + "=" + callbackName;
- }
-
- // Use data converter to retrieve json after script execution
- s.converters[ "script json" ] = function() {
- if ( !responseContainer ) {
- jQuery.error( callbackName + " was not called" );
- }
- return responseContainer[ 0 ];
- };
-
- // Force json dataType
- s.dataTypes[ 0 ] = "json";
-
- // Install callback
- overwritten = window[ callbackName ];
- window[ callbackName ] = function() {
- responseContainer = arguments;
- };
-
- // Clean-up function (fires after converters)
- jqXHR.always( function() {
-
- // If previous value didn't exist - remove it
- if ( overwritten === undefined ) {
- jQuery( window ).removeProp( callbackName );
-
- // Otherwise restore preexisting value
- } else {
- window[ callbackName ] = overwritten;
- }
-
- // Save back as free
- if ( s[ callbackName ] ) {
-
- // Make sure that re-using the options doesn't screw things around
- s.jsonpCallback = originalSettings.jsonpCallback;
-
- // Save the callback name for future use
- oldCallbacks.push( callbackName );
- }
-
- // Call if it was a function and we have a response
- if ( responseContainer && jQuery.isFunction( overwritten ) ) {
- overwritten( responseContainer[ 0 ] );
- }
-
- responseContainer = overwritten = undefined;
- } );
-
- // Delegate to script
- return "script";
- }
-} );
-
-
-
-
-// Support: Safari 8 only
-// In Safari 8 documents created via document.implementation.createHTMLDocument
-// collapse sibling forms: the second one becomes a child of the first one.
-// Because of that, this security measure has to be disabled in Safari 8.
-// https://bugs.webkit.org/show_bug.cgi?id=137337
-support.createHTMLDocument = ( function() {
- var body = document.implementation.createHTMLDocument( "" ).body;
- body.innerHTML = "<form></form><form></form>";
- return body.childNodes.length === 2;
-} )();
-
-
-// Argument "data" should be string of html
-// context (optional): If specified, the fragment will be created in this context,
-// defaults to document
-// keepScripts (optional): If true, will include scripts passed in the html string
-jQuery.parseHTML = function( data, context, keepScripts ) {
- if ( typeof data !== "string" ) {
- return [];
- }
- if ( typeof context === "boolean" ) {
- keepScripts = context;
- context = false;
- }
-
- var base, parsed, scripts;
-
- if ( !context ) {
-
- // Stop scripts or inline event handlers from being executed immediately
- // by using document.implementation
- if ( support.createHTMLDocument ) {
- context = document.implementation.createHTMLDocument( "" );
-
- // Set the base href for the created document
- // so any parsed elements with URLs
- // are based on the document's URL (gh-2965)
- base = context.createElement( "base" );
- base.href = document.location.href;
- context.head.appendChild( base );
- } else {
- context = document;
- }
- }
-
- parsed = rsingleTag.exec( data );
- scripts = !keepScripts && [];
-
- // Single tag
- if ( parsed ) {
- return [ context.createElement( parsed[ 1 ] ) ];
- }
-
- parsed = buildFragment( [ data ], context, scripts );
-
- if ( scripts && scripts.length ) {
- jQuery( scripts ).remove();
- }
-
- return jQuery.merge( [], parsed.childNodes );
-};
-
-
-/**
- * Load a url into a page
- */
-jQuery.fn.load = function( url, params, callback ) {
- var selector, type, response,
- self = this,
- off = url.indexOf( " " );
-
- if ( off > -1 ) {
- selector = stripAndCollapse( url.slice( off ) );
- url = url.slice( 0, off );
- }
-
- // If it's a function
- if ( jQuery.isFunction( params ) ) {
-
- // We assume that it's the callback
- callback = params;
- params = undefined;
-
- // Otherwise, build a param string
- } else if ( params && typeof params === "object" ) {
- type = "POST";
- }
-
- // If we have elements to modify, make the request
- if ( self.length > 0 ) {
- jQuery.ajax( {
- url: url,
-
- // If "type" variable is undefined, then "GET" method will be used.
- // Make value of this field explicit since
- // user can override it through ajaxSetup method
- type: type || "GET",
- dataType: "html",
- data: params
- } ).done( function( responseText ) {
-
- // Save response for use in complete callback
- response = arguments;
-
- self.html( selector ?
-
- // If a selector was specified, locate the right elements in a dummy div
- // Exclude scripts to avoid IE 'Permission Denied' errors
- jQuery( "<div>" ).append( jQuery.parseHTML( responseText ) ).find( selector ) :
-
- // Otherwise use the full result
- responseText );
-
- // If the request succeeds, this function gets "data", "status", "jqXHR"
- // but they are ignored because response was set above.
- // If it fails, this function gets "jqXHR", "status", "error"
- } ).always( callback && function( jqXHR, status ) {
- self.each( function() {
- callback.apply( this, response || [ jqXHR.responseText, status, jqXHR ] );
- } );
- } );
- }
-
- return this;
-};
-
-
-
-
-// Attach a bunch of functions for handling common AJAX events
-jQuery.each( [
- "ajaxStart",
- "ajaxStop",
- "ajaxComplete",
- "ajaxError",
- "ajaxSuccess",
- "ajaxSend"
-], function( i, type ) {
- jQuery.fn[ type ] = function( fn ) {
- return this.on( type, fn );
- };
-} );
-
-
-
-
-jQuery.expr.pseudos.animated = function( elem ) {
- return jQuery.grep( jQuery.timers, function( fn ) {
- return elem === fn.elem;
- } ).length;
-};
-
-
-
-
-jQuery.offset = {
- setOffset: function( elem, options, i ) {
- var curPosition, curLeft, curCSSTop, curTop, curOffset, curCSSLeft, calculatePosition,
- position = jQuery.css( elem, "position" ),
- curElem = jQuery( elem ),
- props = {};
-
- // Set position first, in-case top/left are set even on static elem
- if ( position === "static" ) {
- elem.style.position = "relative";
- }
-
- curOffset = curElem.offset();
- curCSSTop = jQuery.css( elem, "top" );
- curCSSLeft = jQuery.css( elem, "left" );
- calculatePosition = ( position === "absolute" || position === "fixed" ) &&
- ( curCSSTop + curCSSLeft ).indexOf( "auto" ) > -1;
-
- // Need to be able to calculate position if either
- // top or left is auto and position is either absolute or fixed
- if ( calculatePosition ) {
- curPosition = curElem.position();
- curTop = curPosition.top;
- curLeft = curPosition.left;
-
- } else {
- curTop = parseFloat( curCSSTop ) || 0;
- curLeft = parseFloat( curCSSLeft ) || 0;
- }
-
- if ( jQuery.isFunction( options ) ) {
-
- // Use jQuery.extend here to allow modification of coordinates argument (gh-1848)
- options = options.call( elem, i, jQuery.extend( {}, curOffset ) );
- }
-
- if ( options.top != null ) {
- props.top = ( options.top - curOffset.top ) + curTop;
- }
- if ( options.left != null ) {
- props.left = ( options.left - curOffset.left ) + curLeft;
- }
-
- if ( "using" in options ) {
- options.using.call( elem, props );
-
- } else {
- curElem.css( props );
- }
- }
-};
-
-jQuery.fn.extend( {
- offset: function( options ) {
-
- // Preserve chaining for setter
- if ( arguments.length ) {
- return options === undefined ?
- this :
- this.each( function( i ) {
- jQuery.offset.setOffset( this, options, i );
- } );
- }
-
- var doc, docElem, rect, win,
- elem = this[ 0 ];
-
- if ( !elem ) {
- return;
- }
-
- // Return zeros for disconnected and hidden (display: none) elements (gh-2310)
- // Support: IE <=11 only
- // Running getBoundingClientRect on a
- // disconnected node in IE throws an error
- if ( !elem.getClientRects().length ) {
- return { top: 0, left: 0 };
- }
-
- rect = elem.getBoundingClientRect();
-
- doc = elem.ownerDocument;
- docElem = doc.documentElement;
- win = doc.defaultView;
-
- return {
- top: rect.top + win.pageYOffset - docElem.clientTop,
- left: rect.left + win.pageXOffset - docElem.clientLeft
- };
- },
-
- position: function() {
- if ( !this[ 0 ] ) {
- return;
- }
-
- var offsetParent, offset,
- elem = this[ 0 ],
- parentOffset = { top: 0, left: 0 };
-
- // Fixed elements are offset from window (parentOffset = {top:0, left: 0},
- // because it is its only offset parent
- if ( jQuery.css( elem, "position" ) === "fixed" ) {
-
- // Assume getBoundingClientRect is there when computed position is fixed
- offset = elem.getBoundingClientRect();
-
- } else {
-
- // Get *real* offsetParent
- offsetParent = this.offsetParent();
-
- // Get correct offsets
- offset = this.offset();
- if ( !nodeName( offsetParent[ 0 ], "html" ) ) {
- parentOffset = offsetParent.offset();
- }
-
- // Add offsetParent borders
- parentOffset = {
- top: parentOffset.top + jQuery.css( offsetParent[ 0 ], "borderTopWidth", true ),
- left: parentOffset.left + jQuery.css( offsetParent[ 0 ], "borderLeftWidth", true )
- };
- }
-
- // Subtract parent offsets and element margins
- return {
- top: offset.top - parentOffset.top - jQuery.css( elem, "marginTop", true ),
- left: offset.left - parentOffset.left - jQuery.css( elem, "marginLeft", true )
- };
- },
-
- // This method will return documentElement in the following cases:
- // 1) For the element inside the iframe without offsetParent, this method will return
- // documentElement of the parent window
- // 2) For the hidden or detached element
- // 3) For body or html element, i.e. in case of the html node - it will return itself
- //
- // but those exceptions were never presented as a real life use-cases
- // and might be considered as more preferable results.
- //
- // This logic, however, is not guaranteed and can change at any point in the future
- offsetParent: function() {
- return this.map( function() {
- var offsetParent = this.offsetParent;
-
- while ( offsetParent && jQuery.css( offsetParent, "position" ) === "static" ) {
- offsetParent = offsetParent.offsetParent;
- }
-
- return offsetParent || documentElement;
- } );
- }
-} );
-
-// Create scrollLeft and scrollTop methods
-jQuery.each( { scrollLeft: "pageXOffset", scrollTop: "pageYOffset" }, function( method, prop ) {
- var top = "pageYOffset" === prop;
-
- jQuery.fn[ method ] = function( val ) {
- return access( this, function( elem, method, val ) {
-
- // Coalesce documents and windows
- var win;
- if ( jQuery.isWindow( elem ) ) {
- win = elem;
- } else if ( elem.nodeType === 9 ) {
- win = elem.defaultView;
- }
-
- if ( val === undefined ) {
- return win ? win[ prop ] : elem[ method ];
- }
-
- if ( win ) {
- win.scrollTo(
- !top ? val : win.pageXOffset,
- top ? val : win.pageYOffset
- );
-
- } else {
- elem[ method ] = val;
- }
- }, method, val, arguments.length );
- };
-} );
-
-// Support: Safari <=7 - 9.1, Chrome <=37 - 49
-// Add the top/left cssHooks using jQuery.fn.position
-// Webkit bug: https://bugs.webkit.org/show_bug.cgi?id=29084
-// Blink bug: https://bugs.chromium.org/p/chromium/issues/detail?id=589347
-// getComputedStyle returns percent when specified for top/left/bottom/right;
-// rather than make the css module depend on the offset module, just check for it here
-jQuery.each( [ "top", "left" ], function( i, prop ) {
- jQuery.cssHooks[ prop ] = addGetHookIf( support.pixelPosition,
- function( elem, computed ) {
- if ( computed ) {
- computed = curCSS( elem, prop );
-
- // If curCSS returns percentage, fallback to offset
- return rnumnonpx.test( computed ) ?
- jQuery( elem ).position()[ prop ] + "px" :
- computed;
- }
- }
- );
-} );
-
-
-// Create innerHeight, innerWidth, height, width, outerHeight and outerWidth methods
-jQuery.each( { Height: "height", Width: "width" }, function( name, type ) {
- jQuery.each( { padding: "inner" + name, content: type, "": "outer" + name },
- function( defaultExtra, funcName ) {
-
- // Margin is only for outerHeight, outerWidth
- jQuery.fn[ funcName ] = function( margin, value ) {
- var chainable = arguments.length && ( defaultExtra || typeof margin !== "boolean" ),
- extra = defaultExtra || ( margin === true || value === true ? "margin" : "border" );
-
- return access( this, function( elem, type, value ) {
- var doc;
-
- if ( jQuery.isWindow( elem ) ) {
-
- // $( window ).outerWidth/Height return w/h including scrollbars (gh-1729)
- return funcName.indexOf( "outer" ) === 0 ?
- elem[ "inner" + name ] :
- elem.document.documentElement[ "client" + name ];
- }
-
- // Get document width or height
- if ( elem.nodeType === 9 ) {
- doc = elem.documentElement;
-
- // Either scroll[Width/Height] or offset[Width/Height] or client[Width/Height],
- // whichever is greatest
- return Math.max(
- elem.body[ "scroll" + name ], doc[ "scroll" + name ],
- elem.body[ "offset" + name ], doc[ "offset" + name ],
- doc[ "client" + name ]
- );
- }
-
- return value === undefined ?
-
- // Get width or height on the element, requesting but not forcing parseFloat
- jQuery.css( elem, type, extra ) :
-
- // Set width or height on the element
- jQuery.style( elem, type, value, extra );
- }, type, chainable ? margin : undefined, chainable );
- };
- } );
-} );
-
-
-jQuery.fn.extend( {
-
- bind: function( types, data, fn ) {
- return this.on( types, null, data, fn );
- },
- unbind: function( types, fn ) {
- return this.off( types, null, fn );
- },
-
- delegate: function( selector, types, data, fn ) {
- return this.on( types, selector, data, fn );
- },
- undelegate: function( selector, types, fn ) {
-
- // ( namespace ) or ( selector, types [, fn] )
- return arguments.length === 1 ?
- this.off( selector, "**" ) :
- this.off( types, selector || "**", fn );
- }
-} );
-
-jQuery.holdReady = function( hold ) {
- if ( hold ) {
- jQuery.readyWait++;
- } else {
- jQuery.ready( true );
- }
-};
-jQuery.isArray = Array.isArray;
-jQuery.parseJSON = JSON.parse;
-jQuery.nodeName = nodeName;
-
-
-
-
-// Register as a named AMD module, since jQuery can be concatenated with other
-// files that may use define, but not via a proper concatenation script that
-// understands anonymous AMD modules. A named AMD is safest and most robust
-// way to register. Lowercase jquery is used because AMD module names are
-// derived from file names, and jQuery is normally delivered in a lowercase
-// file name. Do this after creating the global so that if an AMD module wants
-// to call noConflict to hide this version of jQuery, it will work.
-
-// Note that for maximum portability, libraries that are not jQuery should
-// declare themselves as anonymous modules, and avoid setting a global if an
-// AMD loader is present. jQuery is a special case. For more information, see
-// https://github.com/jrburke/requirejs/wiki/Updating-existing-libraries#wiki-anon
-
-if ( typeof define === "function" && define.amd ) {
- define( "jquery", [], function() {
- return jQuery;
- } );
-}
-
-
-
-
-var
-
- // Map over jQuery in case of overwrite
- _jQuery = window.jQuery,
-
- // Map over the $ in case of overwrite
- _$ = window.$;
-
-jQuery.noConflict = function( deep ) {
- if ( window.$ === jQuery ) {
- window.$ = _$;
- }
-
- if ( deep && window.jQuery === jQuery ) {
- window.jQuery = _jQuery;
- }
-
- return jQuery;
-};
-
-// Expose jQuery and $ identifiers, even in AMD
-// (#7102#comment:10, https://github.com/jquery/jquery/pull/557)
-// and CommonJS for browser emulators (#13566)
-if ( !noGlobal ) {
- window.jQuery = window.$ = jQuery;
-}
-
-
-
-
-return jQuery;
-} );
diff --git a/documentation/Sphinx/build/html/_static/jquery.js b/documentation/Sphinx/build/html/_static/jquery.js
deleted file mode 100644
index 644d35e274fd64ddaf6d12af813e820c424176a9..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/jquery.js
+++ /dev/null
@@ -1,4 +0,0 @@
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diff --git a/documentation/Sphinx/build/html/_static/searchtools.js b/documentation/Sphinx/build/html/_static/searchtools.js
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-/*
- * searchtools.js_t
- * ~~~~~~~~~~~~~~~~
- *
- * Sphinx JavaScript utilities for the full-text search.
- *
- * :copyright: Copyright 2007-2018 by the Sphinx team, see AUTHORS.
- * :license: BSD, see LICENSE for details.
- *
- */
-
-
-/* Non-minified version JS is _stemmer.js if file is provided */
-/**
- * Porter Stemmer
- */
-var Stemmer = function() {
-
- var step2list = {
- ational: 'ate',
- tional: 'tion',
- enci: 'ence',
- anci: 'ance',
- izer: 'ize',
- bli: 'ble',
- alli: 'al',
- entli: 'ent',
- eli: 'e',
- ousli: 'ous',
- ization: 'ize',
- ation: 'ate',
- ator: 'ate',
- alism: 'al',
- iveness: 'ive',
- fulness: 'ful',
- ousness: 'ous',
- aliti: 'al',
- iviti: 'ive',
- biliti: 'ble',
- logi: 'log'
- };
-
- var step3list = {
- icate: 'ic',
- ative: '',
- alize: 'al',
- iciti: 'ic',
- ical: 'ic',
- ful: '',
- ness: ''
- };
-
- var c = "[^aeiou]"; // consonant
- var v = "[aeiouy]"; // vowel
- var C = c + "[^aeiouy]*"; // consonant sequence
- var V = v + "[aeiou]*"; // vowel sequence
-
- var mgr0 = "^(" + C + ")?" + V + C; // [C]VC... is m>0
- var meq1 = "^(" + C + ")?" + V + C + "(" + V + ")?$"; // [C]VC[V] is m=1
- var mgr1 = "^(" + C + ")?" + V + C + V + C; // [C]VCVC... is m>1
- var s_v = "^(" + C + ")?" + v; // vowel in stem
-
- this.stemWord = function (w) {
- var stem;
- var suffix;
- var firstch;
- var origword = w;
-
- if (w.length < 3)
- return w;
-
- var re;
- var re2;
- var re3;
- var re4;
-
- firstch = w.substr(0,1);
- if (firstch == "y")
- w = firstch.toUpperCase() + w.substr(1);
-
- // Step 1a
- re = /^(.+?)(ss|i)es$/;
- re2 = /^(.+?)([^s])s$/;
-
- if (re.test(w))
- w = w.replace(re,"$1$2");
- else if (re2.test(w))
- w = w.replace(re2,"$1$2");
-
- // Step 1b
- re = /^(.+?)eed$/;
- re2 = /^(.+?)(ed|ing)$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- re = new RegExp(mgr0);
- if (re.test(fp[1])) {
- re = /.$/;
- w = w.replace(re,"");
- }
- }
- else if (re2.test(w)) {
- var fp = re2.exec(w);
- stem = fp[1];
- re2 = new RegExp(s_v);
- if (re2.test(stem)) {
- w = stem;
- re2 = /(at|bl|iz)$/;
- re3 = new RegExp("([^aeiouylsz])\\1$");
- re4 = new RegExp("^" + C + v + "[^aeiouwxy]$");
- if (re2.test(w))
- w = w + "e";
- else if (re3.test(w)) {
- re = /.$/;
- w = w.replace(re,"");
- }
- else if (re4.test(w))
- w = w + "e";
- }
- }
-
- // Step 1c
- re = /^(.+?)y$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- stem = fp[1];
- re = new RegExp(s_v);
- if (re.test(stem))
- w = stem + "i";
- }
-
- // Step 2
- re = /^(.+?)(ational|tional|enci|anci|izer|bli|alli|entli|eli|ousli|ization|ation|ator|alism|iveness|fulness|ousness|aliti|iviti|biliti|logi)$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- stem = fp[1];
- suffix = fp[2];
- re = new RegExp(mgr0);
- if (re.test(stem))
- w = stem + step2list[suffix];
- }
-
- // Step 3
- re = /^(.+?)(icate|ative|alize|iciti|ical|ful|ness)$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- stem = fp[1];
- suffix = fp[2];
- re = new RegExp(mgr0);
- if (re.test(stem))
- w = stem + step3list[suffix];
- }
-
- // Step 4
- re = /^(.+?)(al|ance|ence|er|ic|able|ible|ant|ement|ment|ent|ou|ism|ate|iti|ous|ive|ize)$/;
- re2 = /^(.+?)(s|t)(ion)$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- stem = fp[1];
- re = new RegExp(mgr1);
- if (re.test(stem))
- w = stem;
- }
- else if (re2.test(w)) {
- var fp = re2.exec(w);
- stem = fp[1] + fp[2];
- re2 = new RegExp(mgr1);
- if (re2.test(stem))
- w = stem;
- }
-
- // Step 5
- re = /^(.+?)e$/;
- if (re.test(w)) {
- var fp = re.exec(w);
- stem = fp[1];
- re = new RegExp(mgr1);
- re2 = new RegExp(meq1);
- re3 = new RegExp("^" + C + v + "[^aeiouwxy]$");
- if (re.test(stem) || (re2.test(stem) && !(re3.test(stem))))
- w = stem;
- }
- re = /ll$/;
- re2 = new RegExp(mgr1);
- if (re.test(w) && re2.test(w)) {
- re = /.$/;
- w = w.replace(re,"");
- }
-
- // and turn initial Y back to y
- if (firstch == "y")
- w = firstch.toLowerCase() + w.substr(1);
- return w;
- }
-}
-
-
-
-/**
- * Simple result scoring code.
- */
-var Scorer = {
- // Implement the following function to further tweak the score for each result
- // The function takes a result array [filename, title, anchor, descr, score]
- // and returns the new score.
- /*
- score: function(result) {
- return result[4];
- },
- */
-
- // query matches the full name of an object
- objNameMatch: 11,
- // or matches in the last dotted part of the object name
- objPartialMatch: 6,
- // Additive scores depending on the priority of the object
- objPrio: {0: 15, // used to be importantResults
- 1: 5, // used to be objectResults
- 2: -5}, // used to be unimportantResults
- // Used when the priority is not in the mapping.
- objPrioDefault: 0,
-
- // query found in title
- title: 15,
- // query found in terms
- term: 5
-};
-
-
-
-
-
-var splitChars = (function() {
- var result = {};
- var singles = [96, 180, 187, 191, 215, 247, 749, 885, 903, 907, 909, 930, 1014, 1648,
- 1748, 1809, 2416, 2473, 2481, 2526, 2601, 2609, 2612, 2615, 2653, 2702,
- 2706, 2729, 2737, 2740, 2857, 2865, 2868, 2910, 2928, 2948, 2961, 2971,
- 2973, 3085, 3089, 3113, 3124, 3213, 3217, 3241, 3252, 3295, 3341, 3345,
- 3369, 3506, 3516, 3633, 3715, 3721, 3736, 3744, 3748, 3750, 3756, 3761,
- 3781, 3912, 4239, 4347, 4681, 4695, 4697, 4745, 4785, 4799, 4801, 4823,
- 4881, 5760, 5901, 5997, 6313, 7405, 8024, 8026, 8028, 8030, 8117, 8125,
- 8133, 8181, 8468, 8485, 8487, 8489, 8494, 8527, 11311, 11359, 11687, 11695,
- 11703, 11711, 11719, 11727, 11735, 12448, 12539, 43010, 43014, 43019, 43587,
- 43696, 43713, 64286, 64297, 64311, 64317, 64319, 64322, 64325, 65141];
- var i, j, start, end;
- for (i = 0; i < singles.length; i++) {
- result[singles[i]] = true;
- }
- var ranges = [[0, 47], [58, 64], [91, 94], [123, 169], [171, 177], [182, 184], [706, 709],
- [722, 735], [741, 747], [751, 879], [888, 889], [894, 901], [1154, 1161],
- [1318, 1328], [1367, 1368], [1370, 1376], [1416, 1487], [1515, 1519], [1523, 1568],
- [1611, 1631], [1642, 1645], [1750, 1764], [1767, 1773], [1789, 1790], [1792, 1807],
- [1840, 1868], [1958, 1968], [1970, 1983], [2027, 2035], [2038, 2041], [2043, 2047],
- [2070, 2073], [2075, 2083], [2085, 2087], [2089, 2307], [2362, 2364], [2366, 2383],
- [2385, 2391], [2402, 2405], [2419, 2424], [2432, 2436], [2445, 2446], [2449, 2450],
- [2483, 2485], [2490, 2492], [2494, 2509], [2511, 2523], [2530, 2533], [2546, 2547],
- [2554, 2564], [2571, 2574], [2577, 2578], [2618, 2648], [2655, 2661], [2672, 2673],
- [2677, 2692], [2746, 2748], [2750, 2767], [2769, 2783], [2786, 2789], [2800, 2820],
- [2829, 2830], [2833, 2834], [2874, 2876], [2878, 2907], [2914, 2917], [2930, 2946],
- [2955, 2957], [2966, 2968], [2976, 2978], [2981, 2983], [2987, 2989], [3002, 3023],
- [3025, 3045], [3059, 3076], [3130, 3132], [3134, 3159], [3162, 3167], [3170, 3173],
- [3184, 3191], [3199, 3204], [3258, 3260], [3262, 3293], [3298, 3301], [3312, 3332],
- [3386, 3388], [3390, 3423], [3426, 3429], [3446, 3449], [3456, 3460], [3479, 3481],
- [3518, 3519], [3527, 3584], [3636, 3647], [3655, 3663], [3674, 3712], [3717, 3718],
- [3723, 3724], [3726, 3731], [3752, 3753], [3764, 3772], [3774, 3775], [3783, 3791],
- [3802, 3803], [3806, 3839], [3841, 3871], [3892, 3903], [3949, 3975], [3980, 4095],
- [4139, 4158], [4170, 4175], [4182, 4185], [4190, 4192], [4194, 4196], [4199, 4205],
- [4209, 4212], [4226, 4237], [4250, 4255], [4294, 4303], [4349, 4351], [4686, 4687],
- [4702, 4703], [4750, 4751], [4790, 4791], [4806, 4807], [4886, 4887], [4955, 4968],
- [4989, 4991], [5008, 5023], [5109, 5120], [5741, 5742], [5787, 5791], [5867, 5869],
- [5873, 5887], [5906, 5919], [5938, 5951], [5970, 5983], [6001, 6015], [6068, 6102],
- [6104, 6107], [6109, 6111], [6122, 6127], [6138, 6159], [6170, 6175], [6264, 6271],
- [6315, 6319], [6390, 6399], [6429, 6469], [6510, 6511], [6517, 6527], [6572, 6592],
- [6600, 6607], [6619, 6655], [6679, 6687], [6741, 6783], [6794, 6799], [6810, 6822],
- [6824, 6916], [6964, 6980], [6988, 6991], [7002, 7042], [7073, 7085], [7098, 7167],
- [7204, 7231], [7242, 7244], [7294, 7400], [7410, 7423], [7616, 7679], [7958, 7959],
- [7966, 7967], [8006, 8007], [8014, 8015], [8062, 8063], [8127, 8129], [8141, 8143],
- [8148, 8149], [8156, 8159], [8173, 8177], [8189, 8303], [8306, 8307], [8314, 8318],
- [8330, 8335], [8341, 8449], [8451, 8454], [8456, 8457], [8470, 8472], [8478, 8483],
- [8506, 8507], [8512, 8516], [8522, 8525], [8586, 9311], [9372, 9449], [9472, 10101],
- [10132, 11263], [11493, 11498], [11503, 11516], [11518, 11519], [11558, 11567],
- [11622, 11630], [11632, 11647], [11671, 11679], [11743, 11822], [11824, 12292],
- [12296, 12320], [12330, 12336], [12342, 12343], [12349, 12352], [12439, 12444],
- [12544, 12548], [12590, 12592], [12687, 12689], [12694, 12703], [12728, 12783],
- [12800, 12831], [12842, 12880], [12896, 12927], [12938, 12976], [12992, 13311],
- [19894, 19967], [40908, 40959], [42125, 42191], [42238, 42239], [42509, 42511],
- [42540, 42559], [42592, 42593], [42607, 42622], [42648, 42655], [42736, 42774],
- [42784, 42785], [42889, 42890], [42893, 43002], [43043, 43055], [43062, 43071],
- [43124, 43137], [43188, 43215], [43226, 43249], [43256, 43258], [43260, 43263],
- [43302, 43311], [43335, 43359], [43389, 43395], [43443, 43470], [43482, 43519],
- [43561, 43583], [43596, 43599], [43610, 43615], [43639, 43641], [43643, 43647],
- [43698, 43700], [43703, 43704], [43710, 43711], [43715, 43738], [43742, 43967],
- [44003, 44015], [44026, 44031], [55204, 55215], [55239, 55242], [55292, 55295],
- [57344, 63743], [64046, 64047], [64110, 64111], [64218, 64255], [64263, 64274],
- [64280, 64284], [64434, 64466], [64830, 64847], [64912, 64913], [64968, 65007],
- [65020, 65135], [65277, 65295], [65306, 65312], [65339, 65344], [65371, 65381],
- [65471, 65473], [65480, 65481], [65488, 65489], [65496, 65497]];
- for (i = 0; i < ranges.length; i++) {
- start = ranges[i][0];
- end = ranges[i][1];
- for (j = start; j <= end; j++) {
- result[j] = true;
- }
- }
- return result;
-})();
-
-function splitQuery(query) {
- var result = [];
- var start = -1;
- for (var i = 0; i < query.length; i++) {
- if (splitChars[query.charCodeAt(i)]) {
- if (start !== -1) {
- result.push(query.slice(start, i));
- start = -1;
- }
- } else if (start === -1) {
- start = i;
- }
- }
- if (start !== -1) {
- result.push(query.slice(start));
- }
- return result;
-}
-
-
-
-
-/**
- * Search Module
- */
-var Search = {
-
- _index : null,
- _queued_query : null,
- _pulse_status : -1,
-
- init : function() {
- var params = $.getQueryParameters();
- if (params.q) {
- var query = params.q[0];
- $('input[name="q"]')[0].value = query;
- this.performSearch(query);
- }
- },
-
- loadIndex : function(url) {
- $.ajax({type: "GET", url: url, data: null,
- dataType: "script", cache: true,
- complete: function(jqxhr, textstatus) {
- if (textstatus != "success") {
- document.getElementById("searchindexloader").src = url;
- }
- }});
- },
-
- setIndex : function(index) {
- var q;
- this._index = index;
- if ((q = this._queued_query) !== null) {
- this._queued_query = null;
- Search.query(q);
- }
- },
-
- hasIndex : function() {
- return this._index !== null;
- },
-
- deferQuery : function(query) {
- this._queued_query = query;
- },
-
- stopPulse : function() {
- this._pulse_status = 0;
- },
-
- startPulse : function() {
- if (this._pulse_status >= 0)
- return;
- function pulse() {
- var i;
- Search._pulse_status = (Search._pulse_status + 1) % 4;
- var dotString = '';
- for (i = 0; i < Search._pulse_status; i++)
- dotString += '.';
- Search.dots.text(dotString);
- if (Search._pulse_status > -1)
- window.setTimeout(pulse, 500);
- }
- pulse();
- },
-
- /**
- * perform a search for something (or wait until index is loaded)
- */
- performSearch : function(query) {
- // create the required interface elements
- this.out = $('#search-results');
- this.title = $('<h2>' + _('Searching') + '</h2>').appendTo(this.out);
- this.dots = $('<span></span>').appendTo(this.title);
- this.status = $('<p style="display: none"></p>').appendTo(this.out);
- this.output = $('<ul class="search"/>').appendTo(this.out);
-
- $('#search-progress').text(_('Preparing search...'));
- this.startPulse();
-
- // index already loaded, the browser was quick!
- if (this.hasIndex())
- this.query(query);
- else
- this.deferQuery(query);
- },
-
- /**
- * execute search (requires search index to be loaded)
- */
- query : function(query) {
- var i;
- var stopwords = ["a","and","are","as","at","be","but","by","for","if","in","into","is","it","near","no","not","of","on","or","such","that","the","their","then","there","these","they","this","to","was","will","with"];
-
- // stem the searchterms and add them to the correct list
- var stemmer = new Stemmer();
- var searchterms = [];
- var excluded = [];
- var hlterms = [];
- var tmp = splitQuery(query);
- var objectterms = [];
- for (i = 0; i < tmp.length; i++) {
- if (tmp[i] !== "") {
- objectterms.push(tmp[i].toLowerCase());
- }
-
- if ($u.indexOf(stopwords, tmp[i].toLowerCase()) != -1 || tmp[i].match(/^\d+$/) ||
- tmp[i] === "") {
- // skip this "word"
- continue;
- }
- // stem the word
- var word = stemmer.stemWord(tmp[i].toLowerCase());
- // prevent stemmer from cutting word smaller than two chars
- if(word.length < 3 && tmp[i].length >= 3) {
- word = tmp[i];
- }
- var toAppend;
- // select the correct list
- if (word[0] == '-') {
- toAppend = excluded;
- word = word.substr(1);
- }
- else {
- toAppend = searchterms;
- hlterms.push(tmp[i].toLowerCase());
- }
- // only add if not already in the list
- if (!$u.contains(toAppend, word))
- toAppend.push(word);
- }
- var highlightstring = '?highlight=' + $.urlencode(hlterms.join(" "));
-
- // console.debug('SEARCH: searching for:');
- // console.info('required: ', searchterms);
- // console.info('excluded: ', excluded);
-
- // prepare search
- var terms = this._index.terms;
- var titleterms = this._index.titleterms;
-
- // array of [filename, title, anchor, descr, score]
- var results = [];
- $('#search-progress').empty();
-
- // lookup as object
- for (i = 0; i < objectterms.length; i++) {
- var others = [].concat(objectterms.slice(0, i),
- objectterms.slice(i+1, objectterms.length));
- results = results.concat(this.performObjectSearch(objectterms[i], others));
- }
-
- // lookup as search terms in fulltext
- results = results.concat(this.performTermsSearch(searchterms, excluded, terms, titleterms));
-
- // let the scorer override scores with a custom scoring function
- if (Scorer.score) {
- for (i = 0; i < results.length; i++)
- results[i][4] = Scorer.score(results[i]);
- }
-
- // now sort the results by score (in opposite order of appearance, since the
- // display function below uses pop() to retrieve items) and then
- // alphabetically
- results.sort(function(a, b) {
- var left = a[4];
- var right = b[4];
- if (left > right) {
- return 1;
- } else if (left < right) {
- return -1;
- } else {
- // same score: sort alphabetically
- left = a[1].toLowerCase();
- right = b[1].toLowerCase();
- return (left > right) ? -1 : ((left < right) ? 1 : 0);
- }
- });
-
- // for debugging
- //Search.lastresults = results.slice(); // a copy
- //console.info('search results:', Search.lastresults);
-
- // print the results
- var resultCount = results.length;
- function displayNextItem() {
- // results left, load the summary and display it
- if (results.length) {
- var item = results.pop();
- var listItem = $('<li style="display:none"></li>');
- if (DOCUMENTATION_OPTIONS.FILE_SUFFIX === '') {
- // dirhtml builder
- var dirname = item[0] + '/';
- if (dirname.match(/\/index\/$/)) {
- dirname = dirname.substring(0, dirname.length-6);
- } else if (dirname == 'index/') {
- dirname = '';
- }
- listItem.append($('<a/>').attr('href',
- DOCUMENTATION_OPTIONS.URL_ROOT + dirname +
- highlightstring + item[2]).html(item[1]));
- } else {
- // normal html builders
- listItem.append($('<a/>').attr('href',
- item[0] + DOCUMENTATION_OPTIONS.FILE_SUFFIX +
- highlightstring + item[2]).html(item[1]));
- }
- if (item[3]) {
- listItem.append($('<span> (' + item[3] + ')</span>'));
- Search.output.append(listItem);
- listItem.slideDown(5, function() {
- displayNextItem();
- });
- } else if (DOCUMENTATION_OPTIONS.HAS_SOURCE) {
- var suffix = DOCUMENTATION_OPTIONS.SOURCELINK_SUFFIX;
- if (suffix === undefined) {
- suffix = '.txt';
- }
- $.ajax({url: DOCUMENTATION_OPTIONS.URL_ROOT + '_sources/' + item[5] + (item[5].slice(-suffix.length) === suffix ? '' : suffix),
- dataType: "text",
- complete: function(jqxhr, textstatus) {
- var data = jqxhr.responseText;
- if (data !== '' && data !== undefined) {
- listItem.append(Search.makeSearchSummary(data, searchterms, hlterms));
- }
- Search.output.append(listItem);
- listItem.slideDown(5, function() {
- displayNextItem();
- });
- }});
- } else {
- // no source available, just display title
- Search.output.append(listItem);
- listItem.slideDown(5, function() {
- displayNextItem();
- });
- }
- }
- // search finished, update title and status message
- else {
- Search.stopPulse();
- Search.title.text(_('Search Results'));
- if (!resultCount)
- Search.status.text(_('Your search did not match any documents. Please make sure that all words are spelled correctly and that you\'ve selected enough categories.'));
- else
- Search.status.text(_('Search finished, found %s page(s) matching the search query.').replace('%s', resultCount));
- Search.status.fadeIn(500);
- }
- }
- displayNextItem();
- },
-
- /**
- * search for object names
- */
- performObjectSearch : function(object, otherterms) {
- var filenames = this._index.filenames;
- var docnames = this._index.docnames;
- var objects = this._index.objects;
- var objnames = this._index.objnames;
- var titles = this._index.titles;
-
- var i;
- var results = [];
-
- for (var prefix in objects) {
- for (var name in objects[prefix]) {
- var fullname = (prefix ? prefix + '.' : '') + name;
- if (fullname.toLowerCase().indexOf(object) > -1) {
- var score = 0;
- var parts = fullname.split('.');
- // check for different match types: exact matches of full name or
- // "last name" (i.e. last dotted part)
- if (fullname == object || parts[parts.length - 1] == object) {
- score += Scorer.objNameMatch;
- // matches in last name
- } else if (parts[parts.length - 1].indexOf(object) > -1) {
- score += Scorer.objPartialMatch;
- }
- var match = objects[prefix][name];
- var objname = objnames[match[1]][2];
- var title = titles[match[0]];
- // If more than one term searched for, we require other words to be
- // found in the name/title/description
- if (otherterms.length > 0) {
- var haystack = (prefix + ' ' + name + ' ' +
- objname + ' ' + title).toLowerCase();
- var allfound = true;
- for (i = 0; i < otherterms.length; i++) {
- if (haystack.indexOf(otherterms[i]) == -1) {
- allfound = false;
- break;
- }
- }
- if (!allfound) {
- continue;
- }
- }
- var descr = objname + _(', in ') + title;
-
- var anchor = match[3];
- if (anchor === '')
- anchor = fullname;
- else if (anchor == '-')
- anchor = objnames[match[1]][1] + '-' + fullname;
- // add custom score for some objects according to scorer
- if (Scorer.objPrio.hasOwnProperty(match[2])) {
- score += Scorer.objPrio[match[2]];
- } else {
- score += Scorer.objPrioDefault;
- }
- results.push([docnames[match[0]], fullname, '#'+anchor, descr, score, filenames[match[0]]]);
- }
- }
- }
-
- return results;
- },
-
- /**
- * search for full-text terms in the index
- */
- performTermsSearch : function(searchterms, excluded, terms, titleterms) {
- var docnames = this._index.docnames;
- var filenames = this._index.filenames;
- var titles = this._index.titles;
-
- var i, j, file;
- var fileMap = {};
- var scoreMap = {};
- var results = [];
-
- // perform the search on the required terms
- for (i = 0; i < searchterms.length; i++) {
- var word = searchterms[i];
- var files = [];
- var _o = [
- {files: terms[word], score: Scorer.term},
- {files: titleterms[word], score: Scorer.title}
- ];
-
- // no match but word was a required one
- if ($u.every(_o, function(o){return o.files === undefined;})) {
- break;
- }
- // found search word in contents
- $u.each(_o, function(o) {
- var _files = o.files;
- if (_files === undefined)
- return
-
- if (_files.length === undefined)
- _files = [_files];
- files = files.concat(_files);
-
- // set score for the word in each file to Scorer.term
- for (j = 0; j < _files.length; j++) {
- file = _files[j];
- if (!(file in scoreMap))
- scoreMap[file] = {}
- scoreMap[file][word] = o.score;
- }
- });
-
- // create the mapping
- for (j = 0; j < files.length; j++) {
- file = files[j];
- if (file in fileMap)
- fileMap[file].push(word);
- else
- fileMap[file] = [word];
- }
- }
-
- // now check if the files don't contain excluded terms
- for (file in fileMap) {
- var valid = true;
-
- // check if all requirements are matched
- if (fileMap[file].length != searchterms.length)
- continue;
-
- // ensure that none of the excluded terms is in the search result
- for (i = 0; i < excluded.length; i++) {
- if (terms[excluded[i]] == file ||
- titleterms[excluded[i]] == file ||
- $u.contains(terms[excluded[i]] || [], file) ||
- $u.contains(titleterms[excluded[i]] || [], file)) {
- valid = false;
- break;
- }
- }
-
- // if we have still a valid result we can add it to the result list
- if (valid) {
- // select one (max) score for the file.
- // for better ranking, we should calculate ranking by using words statistics like basic tf-idf...
- var score = $u.max($u.map(fileMap[file], function(w){return scoreMap[file][w]}));
- results.push([docnames[file], titles[file], '', null, score, filenames[file]]);
- }
- }
- return results;
- },
-
- /**
- * helper function to return a node containing the
- * search summary for a given text. keywords is a list
- * of stemmed words, hlwords is the list of normal, unstemmed
- * words. the first one is used to find the occurrence, the
- * latter for highlighting it.
- */
- makeSearchSummary : function(text, keywords, hlwords) {
- var textLower = text.toLowerCase();
- var start = 0;
- $.each(keywords, function() {
- var i = textLower.indexOf(this.toLowerCase());
- if (i > -1)
- start = i;
- });
- start = Math.max(start - 120, 0);
- var excerpt = ((start > 0) ? '...' : '') +
- $.trim(text.substr(start, 240)) +
- ((start + 240 - text.length) ? '...' : '');
- var rv = $('<div class="context"></div>').text(excerpt);
- $.each(hlwords, function() {
- rv = rv.highlightText(this, 'highlighted');
- });
- return rv;
- }
-};
-
-$(document).ready(function() {
- Search.init();
-});
\ No newline at end of file
diff --git a/documentation/Sphinx/build/html/_static/sphinxdoc.css b/documentation/Sphinx/build/html/_static/sphinxdoc.css
deleted file mode 100644
index f6a269c448512fb83105ea0da99c379e0badc341..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/sphinxdoc.css
+++ /dev/null
@@ -1,345 +0,0 @@
-/*
- * sphinxdoc.css_t
- * ~~~~~~~~~~~~~~~
- *
- * Sphinx stylesheet -- sphinxdoc theme. Originally created by
- * Armin Ronacher for Werkzeug.
- *
- * :copyright: Copyright 2007-2018 by the Sphinx team, see AUTHORS.
- * :license: BSD, see LICENSE for details.
- *
- */
-
-@import url("basic.css");
-
-/* -- page layout ----------------------------------------------------------- */
-
-body {
- font-family: 'Lucida Grande', 'Lucida Sans Unicode', 'Geneva',
- 'Verdana', sans-serif;
- font-size: 14px;
- letter-spacing: -0.01em;
- line-height: 150%;
- text-align: center;
- background-color: #BFD1D4;
- color: black;
- padding: 0;
- border: 1px solid #aaa;
-
- margin: 0px 80px 0px 80px;
- min-width: 740px;
-}
-
-div.document {
- background-color: white;
- text-align: left;
- background-image: url(contents.png);
- background-repeat: repeat-x;
-}
-
-div.bodywrapper {
- margin: 0 calc(230px + 10px) 0 0;
- border-right: 1px solid #ccc;
-}
-
-div.body {
- margin: 0;
- padding: 0.5em 20px 20px 20px;
-}
-
-div.related {
- font-size: 1em;
-}
-
-div.related ul {
- background-image: url(navigation.png);
- height: 2em;
- border-top: 1px solid #ddd;
- border-bottom: 1px solid #ddd;
-}
-
-div.related ul li {
- margin: 0;
- padding: 0;
- height: 2em;
- float: left;
-}
-
-div.related ul li.right {
- float: right;
- margin-right: 5px;
-}
-
-div.related ul li a {
- margin: 0;
- padding: 0 5px 0 5px;
- line-height: 1.75em;
- color: #EE9816;
-}
-
-div.related ul li a:hover {
- color: #3CA8E7;
-}
-
-div.sphinxsidebarwrapper {
- padding: 0;
-}
-
-div.sphinxsidebar {
- margin: 0;
- padding: 0.5em 15px 15px 0;
- width: calc(230px - 20px);
- float: right;
- font-size: 1em;
- text-align: left;
-}
-
-div.sphinxsidebar h3, div.sphinxsidebar h4 {
- margin: 1em 0 0.5em 0;
- font-size: 1em;
- padding: 0.1em 0 0.1em 0.5em;
- color: white;
- border: 1px solid #86989B;
- background-color: #AFC1C4;
-}
-
-div.sphinxsidebar h3 a {
- color: white;
-}
-
-div.sphinxsidebar ul {
- padding-left: 1.5em;
- margin-top: 7px;
- padding: 0;
- line-height: 130%;
-}
-
-div.sphinxsidebar ul ul {
- margin-left: 20px;
-}
-
-div.footer {
- background-color: #E3EFF1;
- color: #86989B;
- padding: 3px 8px 3px 0;
- clear: both;
- font-size: 0.8em;
- text-align: right;
-}
-
-div.footer a {
- color: #86989B;
- text-decoration: underline;
-}
-
-/* -- body styles ----------------------------------------------------------- */
-
-p {
- margin: 0.8em 0 0.5em 0;
-}
-
-a {
- color: #CA7900;
- text-decoration: none;
-}
-
-a:hover {
- color: #2491CF;
-}
-
-div.body a {
- text-decoration: underline;
-}
-
-h1 {
- margin: 0;
- padding: 0.7em 0 0.3em 0;
- font-size: 1.5em;
- color: #11557C;
-}
-
-h2 {
- margin: 1.3em 0 0.2em 0;
- font-size: 1.35em;
- padding: 0;
-}
-
-h3 {
- margin: 1em 0 -0.3em 0;
- font-size: 1.2em;
-}
-
-div.body h1 a, div.body h2 a, div.body h3 a, div.body h4 a, div.body h5 a, div.body h6 a {
- color: black!important;
-}
-
-h1 a.anchor, h2 a.anchor, h3 a.anchor, h4 a.anchor, h5 a.anchor, h6 a.anchor {
- display: none;
- margin: 0 0 0 0.3em;
- padding: 0 0.2em 0 0.2em;
- color: #aaa!important;
-}
-
-h1:hover a.anchor, h2:hover a.anchor, h3:hover a.anchor, h4:hover a.anchor,
-h5:hover a.anchor, h6:hover a.anchor {
- display: inline;
-}
-
-h1 a.anchor:hover, h2 a.anchor:hover, h3 a.anchor:hover, h4 a.anchor:hover,
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deleted file mode 100644
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diff --git a/documentation/Sphinx/build/html/_static/underscore-1.3.1.js b/documentation/Sphinx/build/html/_static/underscore-1.3.1.js
deleted file mode 100644
index 208d4cd890c3183d946092ebe982738ade565061..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/underscore-1.3.1.js
+++ /dev/null
@@ -1,999 +0,0 @@
-// Underscore.js 1.3.1
-// (c) 2009-2012 Jeremy Ashkenas, DocumentCloud Inc.
-// Underscore is freely distributable under the MIT license.
-// Portions of Underscore are inspired or borrowed from Prototype,
-// Oliver Steele's Functional, and John Resig's Micro-Templating.
-// For all details and documentation:
-// http://documentcloud.github.com/underscore
-
-(function() {
-
- // Baseline setup
- // --------------
-
- // Establish the root object, `window` in the browser, or `global` on the server.
- var root = this;
-
- // Save the previous value of the `_` variable.
- var previousUnderscore = root._;
-
- // Establish the object that gets returned to break out of a loop iteration.
- var breaker = {};
-
- // Save bytes in the minified (but not gzipped) version:
- var ArrayProto = Array.prototype, ObjProto = Object.prototype, FuncProto = Function.prototype;
-
- // Create quick reference variables for speed access to core prototypes.
- var slice = ArrayProto.slice,
- unshift = ArrayProto.unshift,
- toString = ObjProto.toString,
- hasOwnProperty = ObjProto.hasOwnProperty;
-
- // All **ECMAScript 5** native function implementations that we hope to use
- // are declared here.
- var
- nativeForEach = ArrayProto.forEach,
- nativeMap = ArrayProto.map,
- nativeReduce = ArrayProto.reduce,
- nativeReduceRight = ArrayProto.reduceRight,
- nativeFilter = ArrayProto.filter,
- nativeEvery = ArrayProto.every,
- nativeSome = ArrayProto.some,
- nativeIndexOf = ArrayProto.indexOf,
- nativeLastIndexOf = ArrayProto.lastIndexOf,
- nativeIsArray = Array.isArray,
- nativeKeys = Object.keys,
- nativeBind = FuncProto.bind;
-
- // Create a safe reference to the Underscore object for use below.
- var _ = function(obj) { return new wrapper(obj); };
-
- // Export the Underscore object for **Node.js**, with
- // backwards-compatibility for the old `require()` API. If we're in
- // the browser, add `_` as a global object via a string identifier,
- // for Closure Compiler "advanced" mode.
- if (typeof exports !== 'undefined') {
- if (typeof module !== 'undefined' && module.exports) {
- exports = module.exports = _;
- }
- exports._ = _;
- } else {
- root['_'] = _;
- }
-
- // Current version.
- _.VERSION = '1.3.1';
-
- // Collection Functions
- // --------------------
-
- // The cornerstone, an `each` implementation, aka `forEach`.
- // Handles objects with the built-in `forEach`, arrays, and raw objects.
- // Delegates to **ECMAScript 5**'s native `forEach` if available.
- var each = _.each = _.forEach = function(obj, iterator, context) {
- if (obj == null) return;
- if (nativeForEach && obj.forEach === nativeForEach) {
- obj.forEach(iterator, context);
- } else if (obj.length === +obj.length) {
- for (var i = 0, l = obj.length; i < l; i++) {
- if (i in obj && iterator.call(context, obj[i], i, obj) === breaker) return;
- }
- } else {
- for (var key in obj) {
- if (_.has(obj, key)) {
- if (iterator.call(context, obj[key], key, obj) === breaker) return;
- }
- }
- }
- };
-
- // Return the results of applying the iterator to each element.
- // Delegates to **ECMAScript 5**'s native `map` if available.
- _.map = _.collect = function(obj, iterator, context) {
- var results = [];
- if (obj == null) return results;
- if (nativeMap && obj.map === nativeMap) return obj.map(iterator, context);
- each(obj, function(value, index, list) {
- results[results.length] = iterator.call(context, value, index, list);
- });
- if (obj.length === +obj.length) results.length = obj.length;
- return results;
- };
-
- // **Reduce** builds up a single result from a list of values, aka `inject`,
- // or `foldl`. Delegates to **ECMAScript 5**'s native `reduce` if available.
- _.reduce = _.foldl = _.inject = function(obj, iterator, memo, context) {
- var initial = arguments.length > 2;
- if (obj == null) obj = [];
- if (nativeReduce && obj.reduce === nativeReduce) {
- if (context) iterator = _.bind(iterator, context);
- return initial ? obj.reduce(iterator, memo) : obj.reduce(iterator);
- }
- each(obj, function(value, index, list) {
- if (!initial) {
- memo = value;
- initial = true;
- } else {
- memo = iterator.call(context, memo, value, index, list);
- }
- });
- if (!initial) throw new TypeError('Reduce of empty array with no initial value');
- return memo;
- };
-
- // The right-associative version of reduce, also known as `foldr`.
- // Delegates to **ECMAScript 5**'s native `reduceRight` if available.
- _.reduceRight = _.foldr = function(obj, iterator, memo, context) {
- var initial = arguments.length > 2;
- if (obj == null) obj = [];
- if (nativeReduceRight && obj.reduceRight === nativeReduceRight) {
- if (context) iterator = _.bind(iterator, context);
- return initial ? obj.reduceRight(iterator, memo) : obj.reduceRight(iterator);
- }
- var reversed = _.toArray(obj).reverse();
- if (context && !initial) iterator = _.bind(iterator, context);
- return initial ? _.reduce(reversed, iterator, memo, context) : _.reduce(reversed, iterator);
- };
-
- // Return the first value which passes a truth test. Aliased as `detect`.
- _.find = _.detect = function(obj, iterator, context) {
- var result;
- any(obj, function(value, index, list) {
- if (iterator.call(context, value, index, list)) {
- result = value;
- return true;
- }
- });
- return result;
- };
-
- // Return all the elements that pass a truth test.
- // Delegates to **ECMAScript 5**'s native `filter` if available.
- // Aliased as `select`.
- _.filter = _.select = function(obj, iterator, context) {
- var results = [];
- if (obj == null) return results;
- if (nativeFilter && obj.filter === nativeFilter) return obj.filter(iterator, context);
- each(obj, function(value, index, list) {
- if (iterator.call(context, value, index, list)) results[results.length] = value;
- });
- return results;
- };
-
- // Return all the elements for which a truth test fails.
- _.reject = function(obj, iterator, context) {
- var results = [];
- if (obj == null) return results;
- each(obj, function(value, index, list) {
- if (!iterator.call(context, value, index, list)) results[results.length] = value;
- });
- return results;
- };
-
- // Determine whether all of the elements match a truth test.
- // Delegates to **ECMAScript 5**'s native `every` if available.
- // Aliased as `all`.
- _.every = _.all = function(obj, iterator, context) {
- var result = true;
- if (obj == null) return result;
- if (nativeEvery && obj.every === nativeEvery) return obj.every(iterator, context);
- each(obj, function(value, index, list) {
- if (!(result = result && iterator.call(context, value, index, list))) return breaker;
- });
- return result;
- };
-
- // Determine if at least one element in the object matches a truth test.
- // Delegates to **ECMAScript 5**'s native `some` if available.
- // Aliased as `any`.
- var any = _.some = _.any = function(obj, iterator, context) {
- iterator || (iterator = _.identity);
- var result = false;
- if (obj == null) return result;
- if (nativeSome && obj.some === nativeSome) return obj.some(iterator, context);
- each(obj, function(value, index, list) {
- if (result || (result = iterator.call(context, value, index, list))) return breaker;
- });
- return !!result;
- };
-
- // Determine if a given value is included in the array or object using `===`.
- // Aliased as `contains`.
- _.include = _.contains = function(obj, target) {
- var found = false;
- if (obj == null) return found;
- if (nativeIndexOf && obj.indexOf === nativeIndexOf) return obj.indexOf(target) != -1;
- found = any(obj, function(value) {
- return value === target;
- });
- return found;
- };
-
- // Invoke a method (with arguments) on every item in a collection.
- _.invoke = function(obj, method) {
- var args = slice.call(arguments, 2);
- return _.map(obj, function(value) {
- return (_.isFunction(method) ? method || value : value[method]).apply(value, args);
- });
- };
-
- // Convenience version of a common use case of `map`: fetching a property.
- _.pluck = function(obj, key) {
- return _.map(obj, function(value){ return value[key]; });
- };
-
- // Return the maximum element or (element-based computation).
- _.max = function(obj, iterator, context) {
- if (!iterator && _.isArray(obj)) return Math.max.apply(Math, obj);
- if (!iterator && _.isEmpty(obj)) return -Infinity;
- var result = {computed : -Infinity};
- each(obj, function(value, index, list) {
- var computed = iterator ? iterator.call(context, value, index, list) : value;
- computed >= result.computed && (result = {value : value, computed : computed});
- });
- return result.value;
- };
-
- // Return the minimum element (or element-based computation).
- _.min = function(obj, iterator, context) {
- if (!iterator && _.isArray(obj)) return Math.min.apply(Math, obj);
- if (!iterator && _.isEmpty(obj)) return Infinity;
- var result = {computed : Infinity};
- each(obj, function(value, index, list) {
- var computed = iterator ? iterator.call(context, value, index, list) : value;
- computed < result.computed && (result = {value : value, computed : computed});
- });
- return result.value;
- };
-
- // Shuffle an array.
- _.shuffle = function(obj) {
- var shuffled = [], rand;
- each(obj, function(value, index, list) {
- if (index == 0) {
- shuffled[0] = value;
- } else {
- rand = Math.floor(Math.random() * (index + 1));
- shuffled[index] = shuffled[rand];
- shuffled[rand] = value;
- }
- });
- return shuffled;
- };
-
- // Sort the object's values by a criterion produced by an iterator.
- _.sortBy = function(obj, iterator, context) {
- return _.pluck(_.map(obj, function(value, index, list) {
- return {
- value : value,
- criteria : iterator.call(context, value, index, list)
- };
- }).sort(function(left, right) {
- var a = left.criteria, b = right.criteria;
- return a < b ? -1 : a > b ? 1 : 0;
- }), 'value');
- };
-
- // Groups the object's values by a criterion. Pass either a string attribute
- // to group by, or a function that returns the criterion.
- _.groupBy = function(obj, val) {
- var result = {};
- var iterator = _.isFunction(val) ? val : function(obj) { return obj[val]; };
- each(obj, function(value, index) {
- var key = iterator(value, index);
- (result[key] || (result[key] = [])).push(value);
- });
- return result;
- };
-
- // Use a comparator function to figure out at what index an object should
- // be inserted so as to maintain order. Uses binary search.
- _.sortedIndex = function(array, obj, iterator) {
- iterator || (iterator = _.identity);
- var low = 0, high = array.length;
- while (low < high) {
- var mid = (low + high) >> 1;
- iterator(array[mid]) < iterator(obj) ? low = mid + 1 : high = mid;
- }
- return low;
- };
-
- // Safely convert anything iterable into a real, live array.
- _.toArray = function(iterable) {
- if (!iterable) return [];
- if (iterable.toArray) return iterable.toArray();
- if (_.isArray(iterable)) return slice.call(iterable);
- if (_.isArguments(iterable)) return slice.call(iterable);
- return _.values(iterable);
- };
-
- // Return the number of elements in an object.
- _.size = function(obj) {
- return _.toArray(obj).length;
- };
-
- // Array Functions
- // ---------------
-
- // Get the first element of an array. Passing **n** will return the first N
- // values in the array. Aliased as `head`. The **guard** check allows it to work
- // with `_.map`.
- _.first = _.head = function(array, n, guard) {
- return (n != null) && !guard ? slice.call(array, 0, n) : array[0];
- };
-
- // Returns everything but the last entry of the array. Especcialy useful on
- // the arguments object. Passing **n** will return all the values in
- // the array, excluding the last N. The **guard** check allows it to work with
- // `_.map`.
- _.initial = function(array, n, guard) {
- return slice.call(array, 0, array.length - ((n == null) || guard ? 1 : n));
- };
-
- // Get the last element of an array. Passing **n** will return the last N
- // values in the array. The **guard** check allows it to work with `_.map`.
- _.last = function(array, n, guard) {
- if ((n != null) && !guard) {
- return slice.call(array, Math.max(array.length - n, 0));
- } else {
- return array[array.length - 1];
- }
- };
-
- // Returns everything but the first entry of the array. Aliased as `tail`.
- // Especially useful on the arguments object. Passing an **index** will return
- // the rest of the values in the array from that index onward. The **guard**
- // check allows it to work with `_.map`.
- _.rest = _.tail = function(array, index, guard) {
- return slice.call(array, (index == null) || guard ? 1 : index);
- };
-
- // Trim out all falsy values from an array.
- _.compact = function(array) {
- return _.filter(array, function(value){ return !!value; });
- };
-
- // Return a completely flattened version of an array.
- _.flatten = function(array, shallow) {
- return _.reduce(array, function(memo, value) {
- if (_.isArray(value)) return memo.concat(shallow ? value : _.flatten(value));
- memo[memo.length] = value;
- return memo;
- }, []);
- };
-
- // Return a version of the array that does not contain the specified value(s).
- _.without = function(array) {
- return _.difference(array, slice.call(arguments, 1));
- };
-
- // Produce a duplicate-free version of the array. If the array has already
- // been sorted, you have the option of using a faster algorithm.
- // Aliased as `unique`.
- _.uniq = _.unique = function(array, isSorted, iterator) {
- var initial = iterator ? _.map(array, iterator) : array;
- var result = [];
- _.reduce(initial, function(memo, el, i) {
- if (0 == i || (isSorted === true ? _.last(memo) != el : !_.include(memo, el))) {
- memo[memo.length] = el;
- result[result.length] = array[i];
- }
- return memo;
- }, []);
- return result;
- };
-
- // Produce an array that contains the union: each distinct element from all of
- // the passed-in arrays.
- _.union = function() {
- return _.uniq(_.flatten(arguments, true));
- };
-
- // Produce an array that contains every item shared between all the
- // passed-in arrays. (Aliased as "intersect" for back-compat.)
- _.intersection = _.intersect = function(array) {
- var rest = slice.call(arguments, 1);
- return _.filter(_.uniq(array), function(item) {
- return _.every(rest, function(other) {
- return _.indexOf(other, item) >= 0;
- });
- });
- };
-
- // Take the difference between one array and a number of other arrays.
- // Only the elements present in just the first array will remain.
- _.difference = function(array) {
- var rest = _.flatten(slice.call(arguments, 1));
- return _.filter(array, function(value){ return !_.include(rest, value); });
- };
-
- // Zip together multiple lists into a single array -- elements that share
- // an index go together.
- _.zip = function() {
- var args = slice.call(arguments);
- var length = _.max(_.pluck(args, 'length'));
- var results = new Array(length);
- for (var i = 0; i < length; i++) results[i] = _.pluck(args, "" + i);
- return results;
- };
-
- // If the browser doesn't supply us with indexOf (I'm looking at you, **MSIE**),
- // we need this function. Return the position of the first occurrence of an
- // item in an array, or -1 if the item is not included in the array.
- // Delegates to **ECMAScript 5**'s native `indexOf` if available.
- // If the array is large and already in sort order, pass `true`
- // for **isSorted** to use binary search.
- _.indexOf = function(array, item, isSorted) {
- if (array == null) return -1;
- var i, l;
- if (isSorted) {
- i = _.sortedIndex(array, item);
- return array[i] === item ? i : -1;
- }
- if (nativeIndexOf && array.indexOf === nativeIndexOf) return array.indexOf(item);
- for (i = 0, l = array.length; i < l; i++) if (i in array && array[i] === item) return i;
- return -1;
- };
-
- // Delegates to **ECMAScript 5**'s native `lastIndexOf` if available.
- _.lastIndexOf = function(array, item) {
- if (array == null) return -1;
- if (nativeLastIndexOf && array.lastIndexOf === nativeLastIndexOf) return array.lastIndexOf(item);
- var i = array.length;
- while (i--) if (i in array && array[i] === item) return i;
- return -1;
- };
-
- // Generate an integer Array containing an arithmetic progression. A port of
- // the native Python `range()` function. See
- // [the Python documentation](http://docs.python.org/library/functions.html#range).
- _.range = function(start, stop, step) {
- if (arguments.length <= 1) {
- stop = start || 0;
- start = 0;
- }
- step = arguments[2] || 1;
-
- var len = Math.max(Math.ceil((stop - start) / step), 0);
- var idx = 0;
- var range = new Array(len);
-
- while(idx < len) {
- range[idx++] = start;
- start += step;
- }
-
- return range;
- };
-
- // Function (ahem) Functions
- // ------------------
-
- // Reusable constructor function for prototype setting.
- var ctor = function(){};
-
- // Create a function bound to a given object (assigning `this`, and arguments,
- // optionally). Binding with arguments is also known as `curry`.
- // Delegates to **ECMAScript 5**'s native `Function.bind` if available.
- // We check for `func.bind` first, to fail fast when `func` is undefined.
- _.bind = function bind(func, context) {
- var bound, args;
- if (func.bind === nativeBind && nativeBind) return nativeBind.apply(func, slice.call(arguments, 1));
- if (!_.isFunction(func)) throw new TypeError;
- args = slice.call(arguments, 2);
- return bound = function() {
- if (!(this instanceof bound)) return func.apply(context, args.concat(slice.call(arguments)));
- ctor.prototype = func.prototype;
- var self = new ctor;
- var result = func.apply(self, args.concat(slice.call(arguments)));
- if (Object(result) === result) return result;
- return self;
- };
- };
-
- // Bind all of an object's methods to that object. Useful for ensuring that
- // all callbacks defined on an object belong to it.
- _.bindAll = function(obj) {
- var funcs = slice.call(arguments, 1);
- if (funcs.length == 0) funcs = _.functions(obj);
- each(funcs, function(f) { obj[f] = _.bind(obj[f], obj); });
- return obj;
- };
-
- // Memoize an expensive function by storing its results.
- _.memoize = function(func, hasher) {
- var memo = {};
- hasher || (hasher = _.identity);
- return function() {
- var key = hasher.apply(this, arguments);
- return _.has(memo, key) ? memo[key] : (memo[key] = func.apply(this, arguments));
- };
- };
-
- // Delays a function for the given number of milliseconds, and then calls
- // it with the arguments supplied.
- _.delay = function(func, wait) {
- var args = slice.call(arguments, 2);
- return setTimeout(function(){ return func.apply(func, args); }, wait);
- };
-
- // Defers a function, scheduling it to run after the current call stack has
- // cleared.
- _.defer = function(func) {
- return _.delay.apply(_, [func, 1].concat(slice.call(arguments, 1)));
- };
-
- // Returns a function, that, when invoked, will only be triggered at most once
- // during a given window of time.
- _.throttle = function(func, wait) {
- var context, args, timeout, throttling, more;
- var whenDone = _.debounce(function(){ more = throttling = false; }, wait);
- return function() {
- context = this; args = arguments;
- var later = function() {
- timeout = null;
- if (more) func.apply(context, args);
- whenDone();
- };
- if (!timeout) timeout = setTimeout(later, wait);
- if (throttling) {
- more = true;
- } else {
- func.apply(context, args);
- }
- whenDone();
- throttling = true;
- };
- };
-
- // Returns a function, that, as long as it continues to be invoked, will not
- // be triggered. The function will be called after it stops being called for
- // N milliseconds.
- _.debounce = function(func, wait) {
- var timeout;
- return function() {
- var context = this, args = arguments;
- var later = function() {
- timeout = null;
- func.apply(context, args);
- };
- clearTimeout(timeout);
- timeout = setTimeout(later, wait);
- };
- };
-
- // Returns a function that will be executed at most one time, no matter how
- // often you call it. Useful for lazy initialization.
- _.once = function(func) {
- var ran = false, memo;
- return function() {
- if (ran) return memo;
- ran = true;
- return memo = func.apply(this, arguments);
- };
- };
-
- // Returns the first function passed as an argument to the second,
- // allowing you to adjust arguments, run code before and after, and
- // conditionally execute the original function.
- _.wrap = function(func, wrapper) {
- return function() {
- var args = [func].concat(slice.call(arguments, 0));
- return wrapper.apply(this, args);
- };
- };
-
- // Returns a function that is the composition of a list of functions, each
- // consuming the return value of the function that follows.
- _.compose = function() {
- var funcs = arguments;
- return function() {
- var args = arguments;
- for (var i = funcs.length - 1; i >= 0; i--) {
- args = [funcs[i].apply(this, args)];
- }
- return args[0];
- };
- };
-
- // Returns a function that will only be executed after being called N times.
- _.after = function(times, func) {
- if (times <= 0) return func();
- return function() {
- if (--times < 1) { return func.apply(this, arguments); }
- };
- };
-
- // Object Functions
- // ----------------
-
- // Retrieve the names of an object's properties.
- // Delegates to **ECMAScript 5**'s native `Object.keys`
- _.keys = nativeKeys || function(obj) {
- if (obj !== Object(obj)) throw new TypeError('Invalid object');
- var keys = [];
- for (var key in obj) if (_.has(obj, key)) keys[keys.length] = key;
- return keys;
- };
-
- // Retrieve the values of an object's properties.
- _.values = function(obj) {
- return _.map(obj, _.identity);
- };
-
- // Return a sorted list of the function names available on the object.
- // Aliased as `methods`
- _.functions = _.methods = function(obj) {
- var names = [];
- for (var key in obj) {
- if (_.isFunction(obj[key])) names.push(key);
- }
- return names.sort();
- };
-
- // Extend a given object with all the properties in passed-in object(s).
- _.extend = function(obj) {
- each(slice.call(arguments, 1), function(source) {
- for (var prop in source) {
- obj[prop] = source[prop];
- }
- });
- return obj;
- };
-
- // Fill in a given object with default properties.
- _.defaults = function(obj) {
- each(slice.call(arguments, 1), function(source) {
- for (var prop in source) {
- if (obj[prop] == null) obj[prop] = source[prop];
- }
- });
- return obj;
- };
-
- // Create a (shallow-cloned) duplicate of an object.
- _.clone = function(obj) {
- if (!_.isObject(obj)) return obj;
- return _.isArray(obj) ? obj.slice() : _.extend({}, obj);
- };
-
- // Invokes interceptor with the obj, and then returns obj.
- // The primary purpose of this method is to "tap into" a method chain, in
- // order to perform operations on intermediate results within the chain.
- _.tap = function(obj, interceptor) {
- interceptor(obj);
- return obj;
- };
-
- // Internal recursive comparison function.
- function eq(a, b, stack) {
- // Identical objects are equal. `0 === -0`, but they aren't identical.
- // See the Harmony `egal` proposal: http://wiki.ecmascript.org/doku.php?id=harmony:egal.
- if (a === b) return a !== 0 || 1 / a == 1 / b;
- // A strict comparison is necessary because `null == undefined`.
- if (a == null || b == null) return a === b;
- // Unwrap any wrapped objects.
- if (a._chain) a = a._wrapped;
- if (b._chain) b = b._wrapped;
- // Invoke a custom `isEqual` method if one is provided.
- if (a.isEqual && _.isFunction(a.isEqual)) return a.isEqual(b);
- if (b.isEqual && _.isFunction(b.isEqual)) return b.isEqual(a);
- // Compare `[[Class]]` names.
- var className = toString.call(a);
- if (className != toString.call(b)) return false;
- switch (className) {
- // Strings, numbers, dates, and booleans are compared by value.
- case '[object String]':
- // Primitives and their corresponding object wrappers are equivalent; thus, `"5"` is
- // equivalent to `new String("5")`.
- return a == String(b);
- case '[object Number]':
- // `NaN`s are equivalent, but non-reflexive. An `egal` comparison is performed for
- // other numeric values.
- return a != +a ? b != +b : (a == 0 ? 1 / a == 1 / b : a == +b);
- case '[object Date]':
- case '[object Boolean]':
- // Coerce dates and booleans to numeric primitive values. Dates are compared by their
- // millisecond representations. Note that invalid dates with millisecond representations
- // of `NaN` are not equivalent.
- return +a == +b;
- // RegExps are compared by their source patterns and flags.
- case '[object RegExp]':
- return a.source == b.source &&
- a.global == b.global &&
- a.multiline == b.multiline &&
- a.ignoreCase == b.ignoreCase;
- }
- if (typeof a != 'object' || typeof b != 'object') return false;
- // Assume equality for cyclic structures. The algorithm for detecting cyclic
- // structures is adapted from ES 5.1 section 15.12.3, abstract operation `JO`.
- var length = stack.length;
- while (length--) {
- // Linear search. Performance is inversely proportional to the number of
- // unique nested structures.
- if (stack[length] == a) return true;
- }
- // Add the first object to the stack of traversed objects.
- stack.push(a);
- var size = 0, result = true;
- // Recursively compare objects and arrays.
- if (className == '[object Array]') {
- // Compare array lengths to determine if a deep comparison is necessary.
- size = a.length;
- result = size == b.length;
- if (result) {
- // Deep compare the contents, ignoring non-numeric properties.
- while (size--) {
- // Ensure commutative equality for sparse arrays.
- if (!(result = size in a == size in b && eq(a[size], b[size], stack))) break;
- }
- }
- } else {
- // Objects with different constructors are not equivalent.
- if ('constructor' in a != 'constructor' in b || a.constructor != b.constructor) return false;
- // Deep compare objects.
- for (var key in a) {
- if (_.has(a, key)) {
- // Count the expected number of properties.
- size++;
- // Deep compare each member.
- if (!(result = _.has(b, key) && eq(a[key], b[key], stack))) break;
- }
- }
- // Ensure that both objects contain the same number of properties.
- if (result) {
- for (key in b) {
- if (_.has(b, key) && !(size--)) break;
- }
- result = !size;
- }
- }
- // Remove the first object from the stack of traversed objects.
- stack.pop();
- return result;
- }
-
- // Perform a deep comparison to check if two objects are equal.
- _.isEqual = function(a, b) {
- return eq(a, b, []);
- };
-
- // Is a given array, string, or object empty?
- // An "empty" object has no enumerable own-properties.
- _.isEmpty = function(obj) {
- if (_.isArray(obj) || _.isString(obj)) return obj.length === 0;
- for (var key in obj) if (_.has(obj, key)) return false;
- return true;
- };
-
- // Is a given value a DOM element?
- _.isElement = function(obj) {
- return !!(obj && obj.nodeType == 1);
- };
-
- // Is a given value an array?
- // Delegates to ECMA5's native Array.isArray
- _.isArray = nativeIsArray || function(obj) {
- return toString.call(obj) == '[object Array]';
- };
-
- // Is a given variable an object?
- _.isObject = function(obj) {
- return obj === Object(obj);
- };
-
- // Is a given variable an arguments object?
- _.isArguments = function(obj) {
- return toString.call(obj) == '[object Arguments]';
- };
- if (!_.isArguments(arguments)) {
- _.isArguments = function(obj) {
- return !!(obj && _.has(obj, 'callee'));
- };
- }
-
- // Is a given value a function?
- _.isFunction = function(obj) {
- return toString.call(obj) == '[object Function]';
- };
-
- // Is a given value a string?
- _.isString = function(obj) {
- return toString.call(obj) == '[object String]';
- };
-
- // Is a given value a number?
- _.isNumber = function(obj) {
- return toString.call(obj) == '[object Number]';
- };
-
- // Is the given value `NaN`?
- _.isNaN = function(obj) {
- // `NaN` is the only value for which `===` is not reflexive.
- return obj !== obj;
- };
-
- // Is a given value a boolean?
- _.isBoolean = function(obj) {
- return obj === true || obj === false || toString.call(obj) == '[object Boolean]';
- };
-
- // Is a given value a date?
- _.isDate = function(obj) {
- return toString.call(obj) == '[object Date]';
- };
-
- // Is the given value a regular expression?
- _.isRegExp = function(obj) {
- return toString.call(obj) == '[object RegExp]';
- };
-
- // Is a given value equal to null?
- _.isNull = function(obj) {
- return obj === null;
- };
-
- // Is a given variable undefined?
- _.isUndefined = function(obj) {
- return obj === void 0;
- };
-
- // Has own property?
- _.has = function(obj, key) {
- return hasOwnProperty.call(obj, key);
- };
-
- // Utility Functions
- // -----------------
-
- // Run Underscore.js in *noConflict* mode, returning the `_` variable to its
- // previous owner. Returns a reference to the Underscore object.
- _.noConflict = function() {
- root._ = previousUnderscore;
- return this;
- };
-
- // Keep the identity function around for default iterators.
- _.identity = function(value) {
- return value;
- };
-
- // Run a function **n** times.
- _.times = function (n, iterator, context) {
- for (var i = 0; i < n; i++) iterator.call(context, i);
- };
-
- // Escape a string for HTML interpolation.
- _.escape = function(string) {
- return (''+string).replace(/&/g, '&').replace(/</g, '<').replace(/>/g, '>').replace(/"/g, '"').replace(/'/g, ''').replace(/\//g,'/');
- };
-
- // Add your own custom functions to the Underscore object, ensuring that
- // they're correctly added to the OOP wrapper as well.
- _.mixin = function(obj) {
- each(_.functions(obj), function(name){
- addToWrapper(name, _[name] = obj[name]);
- });
- };
-
- // Generate a unique integer id (unique within the entire client session).
- // Useful for temporary DOM ids.
- var idCounter = 0;
- _.uniqueId = function(prefix) {
- var id = idCounter++;
- return prefix ? prefix + id : id;
- };
-
- // By default, Underscore uses ERB-style template delimiters, change the
- // following template settings to use alternative delimiters.
- _.templateSettings = {
- evaluate : /<%([\s\S]+?)%>/g,
- interpolate : /<%=([\s\S]+?)%>/g,
- escape : /<%-([\s\S]+?)%>/g
- };
-
- // When customizing `templateSettings`, if you don't want to define an
- // interpolation, evaluation or escaping regex, we need one that is
- // guaranteed not to match.
- var noMatch = /.^/;
-
- // Within an interpolation, evaluation, or escaping, remove HTML escaping
- // that had been previously added.
- var unescape = function(code) {
- return code.replace(/\\\\/g, '\\').replace(/\\'/g, "'");
- };
-
- // JavaScript micro-templating, similar to John Resig's implementation.
- // Underscore templating handles arbitrary delimiters, preserves whitespace,
- // and correctly escapes quotes within interpolated code.
- _.template = function(str, data) {
- var c = _.templateSettings;
- var tmpl = 'var __p=[],print=function(){__p.push.apply(__p,arguments);};' +
- 'with(obj||{}){__p.push(\'' +
- str.replace(/\\/g, '\\\\')
- .replace(/'/g, "\\'")
- .replace(c.escape || noMatch, function(match, code) {
- return "',_.escape(" + unescape(code) + "),'";
- })
- .replace(c.interpolate || noMatch, function(match, code) {
- return "'," + unescape(code) + ",'";
- })
- .replace(c.evaluate || noMatch, function(match, code) {
- return "');" + unescape(code).replace(/[\r\n\t]/g, ' ') + ";__p.push('";
- })
- .replace(/\r/g, '\\r')
- .replace(/\n/g, '\\n')
- .replace(/\t/g, '\\t')
- + "');}return __p.join('');";
- var func = new Function('obj', '_', tmpl);
- if (data) return func(data, _);
- return function(data) {
- return func.call(this, data, _);
- };
- };
-
- // Add a "chain" function, which will delegate to the wrapper.
- _.chain = function(obj) {
- return _(obj).chain();
- };
-
- // The OOP Wrapper
- // ---------------
-
- // If Underscore is called as a function, it returns a wrapped object that
- // can be used OO-style. This wrapper holds altered versions of all the
- // underscore functions. Wrapped objects may be chained.
- var wrapper = function(obj) { this._wrapped = obj; };
-
- // Expose `wrapper.prototype` as `_.prototype`
- _.prototype = wrapper.prototype;
-
- // Helper function to continue chaining intermediate results.
- var result = function(obj, chain) {
- return chain ? _(obj).chain() : obj;
- };
-
- // A method to easily add functions to the OOP wrapper.
- var addToWrapper = function(name, func) {
- wrapper.prototype[name] = function() {
- var args = slice.call(arguments);
- unshift.call(args, this._wrapped);
- return result(func.apply(_, args), this._chain);
- };
- };
-
- // Add all of the Underscore functions to the wrapper object.
- _.mixin(_);
-
- // Add all mutator Array functions to the wrapper.
- each(['pop', 'push', 'reverse', 'shift', 'sort', 'splice', 'unshift'], function(name) {
- var method = ArrayProto[name];
- wrapper.prototype[name] = function() {
- var wrapped = this._wrapped;
- method.apply(wrapped, arguments);
- var length = wrapped.length;
- if ((name == 'shift' || name == 'splice') && length === 0) delete wrapped[0];
- return result(wrapped, this._chain);
- };
- });
-
- // Add all accessor Array functions to the wrapper.
- each(['concat', 'join', 'slice'], function(name) {
- var method = ArrayProto[name];
- wrapper.prototype[name] = function() {
- return result(method.apply(this._wrapped, arguments), this._chain);
- };
- });
-
- // Start chaining a wrapped Underscore object.
- wrapper.prototype.chain = function() {
- this._chain = true;
- return this;
- };
-
- // Extracts the result from a wrapped and chained object.
- wrapper.prototype.value = function() {
- return this._wrapped;
- };
-
-}).call(this);
diff --git a/documentation/Sphinx/build/html/_static/underscore.js b/documentation/Sphinx/build/html/_static/underscore.js
deleted file mode 100644
index 5b55f32beaca186f84cca115514f02cddbd1bbd5..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/_static/underscore.js
+++ /dev/null
@@ -1,31 +0,0 @@
-// Underscore.js 1.3.1
-// (c) 2009-2012 Jeremy Ashkenas, DocumentCloud Inc.
-// Underscore is freely distributable under the MIT license.
-// Portions of Underscore are inspired or borrowed from Prototype,
-// Oliver Steele's Functional, and John Resig's Micro-Templating.
-// For all details and documentation:
-// http://documentcloud.github.com/underscore
-(function(){function q(a,c,d){if(a===c)return a!==0||1/a==1/c;if(a==null||c==null)return a===c;if(a._chain)a=a._wrapped;if(c._chain)c=c._wrapped;if(a.isEqual&&b.isFunction(a.isEqual))return a.isEqual(c);if(c.isEqual&&b.isFunction(c.isEqual))return c.isEqual(a);var e=l.call(a);if(e!=l.call(c))return false;switch(e){case "[object String]":return a==String(c);case "[object Number]":return a!=+a?c!=+c:a==0?1/a==1/c:a==+c;case "[object Date]":case "[object Boolean]":return+a==+c;case "[object RegExp]":return a.source==
-c.source&&a.global==c.global&&a.multiline==c.multiline&&a.ignoreCase==c.ignoreCase}if(typeof a!="object"||typeof c!="object")return false;for(var f=d.length;f--;)if(d[f]==a)return true;d.push(a);var f=0,g=true;if(e=="[object Array]"){if(f=a.length,g=f==c.length)for(;f--;)if(!(g=f in a==f in c&&q(a[f],c[f],d)))break}else{if("constructor"in a!="constructor"in c||a.constructor!=c.constructor)return false;for(var h in a)if(b.has(a,h)&&(f++,!(g=b.has(c,h)&&q(a[h],c[h],d))))break;if(g){for(h in c)if(b.has(c,
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-b.forEach=function(a,c,d){if(a!=null)if(w&&a.forEach===w)a.forEach(c,d);else if(a.length===+a.length)for(var e=0,f=a.length;e<f;e++){if(e in a&&c.call(d,a[e],e,a)===n)break}else for(e in a)if(b.has(a,e)&&c.call(d,a[e],e,a)===n)break};b.map=b.collect=function(a,c,b){var e=[];if(a==null)return e;if(x&&a.map===x)return a.map(c,b);j(a,function(a,g,h){e[e.length]=c.call(b,a,g,h)});if(a.length===+a.length)e.length=a.length;return e};b.reduce=b.foldl=b.inject=function(a,c,d,e){var f=arguments.length>2;a==
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- type: 'POST',
- url: opts.deleteCommentURL,
- data: {id: id},
- success: function(data, textStatus, request) {
- var div = $('#cd' + id);
- if (data == 'delete') {
- // Moderator mode: remove the comment and all children immediately
- div.slideUp('fast', function() {
- div.remove();
- });
- return;
- }
- // User mode: only mark the comment as deleted
- div
- .find('span.user-id:first')
- .text('[deleted]').end()
- .find('div.comment-text:first')
- .text('[deleted]').end()
- .find('#cm' + id + ', #dc' + id + ', #ac' + id + ', #rc' + id +
- ', #sp' + id + ', #hp' + id + ', #cr' + id + ', #rl' + id)
- .remove();
- var comment = div.data('comment');
- comment.username = '[deleted]';
- comment.text = '[deleted]';
- div.data('comment', comment);
- },
- error: function(request, textStatus, error) {
- showError('Oops, there was a problem deleting the comment.');
- }
- });
- }
-
- function showProposal(id) {
- $('#sp' + id).hide();
- $('#hp' + id).show();
- $('#pr' + id).slideDown('fast');
- }
-
- function hideProposal(id) {
- $('#hp' + id).hide();
- $('#sp' + id).show();
- $('#pr' + id).slideUp('fast');
- }
-
- function showProposeChange(id) {
- $('#pc' + id).hide();
- $('#hc' + id).show();
- var textarea = $('#pt' + id);
- textarea.val(textarea.data('source'));
- $.fn.autogrow.resize(textarea[0]);
- textarea.slideDown('fast');
- }
-
- function hideProposeChange(id) {
- $('#hc' + id).hide();
- $('#pc' + id).show();
- var textarea = $('#pt' + id);
- textarea.val('').removeAttr('disabled');
- textarea.slideUp('fast');
- }
-
- function toggleCommentMarkupBox(id) {
- $('#mb' + id).toggle();
- }
-
- /** Handle when the user clicks on a sort by link. */
- function handleReSort(link) {
- var classes = link.attr('class').split(/\s+/);
- for (var i=0; i<classes.length; i++) {
- if (classes[i] != 'sort-option') {
- by = classes[i].substring(2);
- }
- }
- setComparator();
- // Save/update the sortBy cookie.
- var expiration = new Date();
- expiration.setDate(expiration.getDate() + 365);
- document.cookie= 'sortBy=' + escape(by) +
- ';expires=' + expiration.toUTCString();
- $('ul.comment-ul').each(function(index, ul) {
- var comments = getChildren($(ul), true);
- comments = sortComments(comments);
- appendComments(comments, $(ul).empty());
- });
- }
-
- /**
- * Function to process a vote when a user clicks an arrow.
- */
- function handleVote(link) {
- if (!opts.voting) {
- showError("You'll need to login to vote.");
- return;
- }
-
- var id = link.attr('id');
- if (!id) {
- // Didn't click on one of the voting arrows.
- return;
- }
- // If it is an unvote, the new vote value is 0,
- // Otherwise it's 1 for an upvote, or -1 for a downvote.
- var value = 0;
- if (id.charAt(1) != 'u') {
- value = id.charAt(0) == 'u' ? 1 : -1;
- }
- // The data to be sent to the server.
- var d = {
- comment_id: id.substring(2),
- value: value
- };
-
- // Swap the vote and unvote links.
- link.hide();
- $('#' + id.charAt(0) + (id.charAt(1) == 'u' ? 'v' : 'u') + d.comment_id)
- .show();
-
- // The div the comment is displayed in.
- var div = $('div#cd' + d.comment_id);
- var data = div.data('comment');
-
- // If this is not an unvote, and the other vote arrow has
- // already been pressed, unpress it.
- if ((d.value !== 0) && (data.vote === d.value * -1)) {
- $('#' + (d.value == 1 ? 'd' : 'u') + 'u' + d.comment_id).hide();
- $('#' + (d.value == 1 ? 'd' : 'u') + 'v' + d.comment_id).show();
- }
-
- // Update the comments rating in the local data.
- data.rating += (data.vote === 0) ? d.value : (d.value - data.vote);
- data.vote = d.value;
- div.data('comment', data);
-
- // Change the rating text.
- div.find('.rating:first')
- .text(data.rating + ' point' + (data.rating == 1 ? '' : 's'));
-
- // Send the vote information to the server.
- $.ajax({
- type: "POST",
- url: opts.processVoteURL,
- data: d,
- error: function(request, textStatus, error) {
- showError('Oops, there was a problem casting that vote.');
- }
- });
- }
-
- /**
- * Open a reply form used to reply to an existing comment.
- */
- function openReply(id) {
- // Swap out the reply link for the hide link
- $('#rl' + id).hide();
- $('#cr' + id).show();
-
- // Add the reply li to the children ul.
- var div = $(renderTemplate(replyTemplate, {id: id})).hide();
- $('#cl' + id)
- .prepend(div)
- // Setup the submit handler for the reply form.
- .find('#rf' + id)
- .submit(function(event) {
- event.preventDefault();
- addComment($('#rf' + id));
- closeReply(id);
- })
- .find('input[type=button]')
- .click(function() {
- closeReply(id);
- });
- div.slideDown('fast', function() {
- $('#rf' + id).find('textarea').focus();
- });
- }
-
- /**
- * Close the reply form opened with openReply.
- */
- function closeReply(id) {
- // Remove the reply div from the DOM.
- $('#rd' + id).slideUp('fast', function() {
- $(this).remove();
- });
-
- // Swap out the hide link for the reply link
- $('#cr' + id).hide();
- $('#rl' + id).show();
- }
-
- /**
- * Recursively sort a tree of comments using the comp comparator.
- */
- function sortComments(comments) {
- comments.sort(comp);
- $.each(comments, function() {
- this.children = sortComments(this.children);
- });
- return comments;
- }
-
- /**
- * Get the children comments from a ul. If recursive is true,
- * recursively include childrens' children.
- */
- function getChildren(ul, recursive) {
- var children = [];
- ul.children().children("[id^='cd']")
- .each(function() {
- var comment = $(this).data('comment');
- if (recursive)
- comment.children = getChildren($(this).find('#cl' + comment.id), true);
- children.push(comment);
- });
- return children;
- }
-
- /** Create a div to display a comment in. */
- function createCommentDiv(comment) {
- if (!comment.displayed && !opts.moderator) {
- return $('<div class="moderate">Thank you! Your comment will show up '
- + 'once it is has been approved by a moderator.</div>');
- }
- // Prettify the comment rating.
- comment.pretty_rating = comment.rating + ' point' +
- (comment.rating == 1 ? '' : 's');
- // Make a class (for displaying not yet moderated comments differently)
- comment.css_class = comment.displayed ? '' : ' moderate';
- // Create a div for this comment.
- var context = $.extend({}, opts, comment);
- var div = $(renderTemplate(commentTemplate, context));
-
- // If the user has voted on this comment, highlight the correct arrow.
- if (comment.vote) {
- var direction = (comment.vote == 1) ? 'u' : 'd';
- div.find('#' + direction + 'v' + comment.id).hide();
- div.find('#' + direction + 'u' + comment.id).show();
- }
-
- if (opts.moderator || comment.text != '[deleted]') {
- div.find('a.reply').show();
- if (comment.proposal_diff)
- div.find('#sp' + comment.id).show();
- if (opts.moderator && !comment.displayed)
- div.find('#cm' + comment.id).show();
- if (opts.moderator || (opts.username == comment.username))
- div.find('#dc' + comment.id).show();
- }
- return div;
- }
-
- /**
- * A simple template renderer. Placeholders such as <%id%> are replaced
- * by context['id'] with items being escaped. Placeholders such as <#id#>
- * are not escaped.
- */
- function renderTemplate(template, context) {
- var esc = $(document.createElement('div'));
-
- function handle(ph, escape) {
- var cur = context;
- $.each(ph.split('.'), function() {
- cur = cur[this];
- });
- return escape ? esc.text(cur || "").html() : cur;
- }
-
- return template.replace(/<([%#])([\w\.]*)\1>/g, function() {
- return handle(arguments[2], arguments[1] == '%' ? true : false);
- });
- }
-
- /** Flash an error message briefly. */
- function showError(message) {
- $(document.createElement('div')).attr({'class': 'popup-error'})
- .append($(document.createElement('div'))
- .attr({'class': 'error-message'}).text(message))
- .appendTo('body')
- .fadeIn("slow")
- .delay(2000)
- .fadeOut("slow");
- }
-
- /** Add a link the user uses to open the comments popup. */
- $.fn.comment = function() {
- return this.each(function() {
- var id = $(this).attr('id').substring(1);
- var count = COMMENT_METADATA[id];
- var title = count + ' comment' + (count == 1 ? '' : 's');
- var image = count > 0 ? opts.commentBrightImage : opts.commentImage;
- var addcls = count == 0 ? ' nocomment' : '';
- $(this)
- .append(
- $(document.createElement('a')).attr({
- href: '#',
- 'class': 'sphinx-comment-open' + addcls,
- id: 'ao' + id
- })
- .append($(document.createElement('img')).attr({
- src: image,
- alt: 'comment',
- title: title
- }))
- .click(function(event) {
- event.preventDefault();
- show($(this).attr('id').substring(2));
- })
- )
- .append(
- $(document.createElement('a')).attr({
- href: '#',
- 'class': 'sphinx-comment-close hidden',
- id: 'ah' + id
- })
- .append($(document.createElement('img')).attr({
- src: opts.closeCommentImage,
- alt: 'close',
- title: 'close'
- }))
- .click(function(event) {
- event.preventDefault();
- hide($(this).attr('id').substring(2));
- })
- );
- });
- };
-
- var opts = {
- processVoteURL: '/_process_vote',
- addCommentURL: '/_add_comment',
- getCommentsURL: '/_get_comments',
- acceptCommentURL: '/_accept_comment',
- deleteCommentURL: '/_delete_comment',
- commentImage: '/static/_static/comment.png',
- closeCommentImage: '/static/_static/comment-close.png',
- loadingImage: '/static/_static/ajax-loader.gif',
- commentBrightImage: '/static/_static/comment-bright.png',
- upArrow: '/static/_static/up.png',
- downArrow: '/static/_static/down.png',
- upArrowPressed: '/static/_static/up-pressed.png',
- downArrowPressed: '/static/_static/down-pressed.png',
- voting: false,
- moderator: false
- };
-
- if (typeof COMMENT_OPTIONS != "undefined") {
- opts = jQuery.extend(opts, COMMENT_OPTIONS);
- }
-
- var popupTemplate = '\
- <div class="sphinx-comments" id="sc<%id%>">\
- <p class="sort-options">\
- Sort by:\
- <a href="#" class="sort-option byrating">best rated</a>\
- <a href="#" class="sort-option byascage">newest</a>\
- <a href="#" class="sort-option byage">oldest</a>\
- </p>\
- <div class="comment-header">Comments</div>\
- <div class="comment-loading" id="cn<%id%>">\
- loading comments... <img src="<%loadingImage%>" alt="" /></div>\
- <ul id="cl<%id%>" class="comment-ul"></ul>\
- <div id="ca<%id%>">\
- <p class="add-a-comment">Add a comment\
- (<a href="#" class="comment-markup" id="ab<%id%>">markup</a>):</p>\
- <div class="comment-markup-box" id="mb<%id%>">\
- reStructured text markup: <i>*emph*</i>, <b>**strong**</b>, \
- <code>``code``</code>, \
- code blocks: <code>::</code> and an indented block after blank line</div>\
- <form method="post" id="cf<%id%>" class="comment-form" action="">\
- <textarea name="comment" cols="80"></textarea>\
- <p class="propose-button">\
- <a href="#" id="pc<%id%>" class="show-propose-change">\
- Propose a change ▹\
- </a>\
- <a href="#" id="hc<%id%>" class="hide-propose-change">\
- Propose a change ▿\
- </a>\
- </p>\
- <textarea name="proposal" id="pt<%id%>" cols="80"\
- spellcheck="false"></textarea>\
- <input type="submit" value="Add comment" />\
- <input type="hidden" name="node" value="<%id%>" />\
- <input type="hidden" name="parent" value="" />\
- </form>\
- </div>\
- </div>';
-
- var commentTemplate = '\
- <div id="cd<%id%>" class="sphinx-comment<%css_class%>">\
- <div class="vote">\
- <div class="arrow">\
- <a href="#" id="uv<%id%>" class="vote" title="vote up">\
- <img src="<%upArrow%>" />\
- </a>\
- <a href="#" id="uu<%id%>" class="un vote" title="vote up">\
- <img src="<%upArrowPressed%>" />\
- </a>\
- </div>\
- <div class="arrow">\
- <a href="#" id="dv<%id%>" class="vote" title="vote down">\
- <img src="<%downArrow%>" id="da<%id%>" />\
- </a>\
- <a href="#" id="du<%id%>" class="un vote" title="vote down">\
- <img src="<%downArrowPressed%>" />\
- </a>\
- </div>\
- </div>\
- <div class="comment-content">\
- <p class="tagline comment">\
- <span class="user-id"><%username%></span>\
- <span class="rating"><%pretty_rating%></span>\
- <span class="delta"><%time.delta%></span>\
- </p>\
- <div class="comment-text comment"><#text#></div>\
- <p class="comment-opts comment">\
- <a href="#" class="reply hidden" id="rl<%id%>">reply ▹</a>\
- <a href="#" class="close-reply" id="cr<%id%>">reply ▿</a>\
- <a href="#" id="sp<%id%>" class="show-proposal">proposal ▹</a>\
- <a href="#" id="hp<%id%>" class="hide-proposal">proposal ▿</a>\
- <a href="#" id="dc<%id%>" class="delete-comment hidden">delete</a>\
- <span id="cm<%id%>" class="moderation hidden">\
- <a href="#" id="ac<%id%>" class="accept-comment">accept</a>\
- </span>\
- </p>\
- <pre class="proposal" id="pr<%id%>">\
-<#proposal_diff#>\
- </pre>\
- <ul class="comment-children" id="cl<%id%>"></ul>\
- </div>\
- <div class="clearleft"></div>\
- </div>\
- </div>';
-
- var replyTemplate = '\
- <li>\
- <div class="reply-div" id="rd<%id%>">\
- <form id="rf<%id%>">\
- <textarea name="comment" cols="80"></textarea>\
- <input type="submit" value="Add reply" />\
- <input type="button" value="Cancel" />\
- <input type="hidden" name="parent" value="<%id%>" />\
- <input type="hidden" name="node" value="" />\
- </form>\
- </div>\
- </li>';
-
- $(document).ready(function() {
- init();
- });
-})(jQuery);
-
-$(document).ready(function() {
- // add comment anchors for all paragraphs that are commentable
- $('.sphinx-has-comment').comment();
-
- // highlight search words in search results
- $("div.context").each(function() {
- var params = $.getQueryParameters();
- var terms = (params.q) ? params.q[0].split(/\s+/) : [];
- var result = $(this);
- $.each(terms, function() {
- result.highlightText(this.toLowerCase(), 'highlighted');
- });
- });
-
- // directly open comment window if requested
- var anchor = document.location.hash;
- if (anchor.substring(0, 9) == '#comment-') {
- $('#ao' + anchor.substring(9)).click();
- document.location.hash = '#s' + anchor.substring(9);
- }
-});
diff --git a/documentation/Sphinx/build/html/api.html b/documentation/Sphinx/build/html/api.html
deleted file mode 100644
index 28961758a3ea549a4ed1ffc7470185e849ccf74a..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/html/api.html
+++ /dev/null
@@ -1,2680 +0,0 @@
-
-
-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
-<head>
- <meta charset="utf-8">
-
- <meta name="viewport" content="width=device-width, initial-scale=1.0">
-
- <title>Auto Generated Documentation — flex_extract 7.1 alpha documentation</title>
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
- <link rel="stylesheet" href="_static/css/theme.css" type="text/css" />
- <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
- <link rel="index" title="Index" href="genindex.html" />
- <link rel="search" title="Search" href="search.html" />
- <link rel="next" title="Support" href="support.html" />
- <link rel="prev" title="CONTROL-file templates" href="user_guide/control_templates.html" />
-
-
- <script src="_static/js/modernizr.min.js"></script>
-
-</head>
-
-<body class="wy-body-for-nav">
-
-
- <div class="wy-grid-for-nav">
-
-
- <nav data-toggle="wy-nav-shift" class="wy-nav-side">
- <div class="wy-side-scroll">
- <div class="wy-side-nav-search">
-
-
-
- <a href="index.html" class="icon icon-home"> flex_extract
-
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- </a>
-
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- <div class="version">
- 7.1
- </div>
-
-
-
-
-<div role="search">
- <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
- <input type="text" name="q" placeholder="Search docs" />
- <input type="hidden" name="check_keywords" value="yes" />
- <input type="hidden" name="area" value="default" />
- </form>
-</div>
-
-
- </div>
-
- <div class="wy-menu wy-menu-vertical" data-spy="affix" role="navigation" aria-label="main navigation">
-
-
-
-
-
-
- <p class="caption"><span class="caption-text">Table of Contents:</span></p>
-<ul class="current">
-<li class="toctree-l1"><a class="reference internal" href="downloads.html">Downloads</a></li>
-<li class="toctree-l1"><a class="reference internal" href="installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="user_guide.html">User Guide</a></li>
-<li class="toctree-l1 current"><a class="current reference internal" href="#">Auto Generated Documentation</a><ul>
-<li class="toctree-l2"><a class="reference internal" href="#porgrams">Porgrams</a><ul>
-<li class="toctree-l3"><a class="reference internal" href="#module-install">install</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-submit">submit</a></li>
-</ul>
-</li>
-<li class="toctree-l2"><a class="reference internal" href="#classes">Classes</a><ul>
-<li class="toctree-l3"><a class="reference internal" href="#module-ControlFile">ControlFile</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-EcFlexpart">EcFlexpart</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-GribUtil">GribUtil</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-MarsRetrieval">MarsRetrieval</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-UioFiles">UioFiles</a></li>
-</ul>
-</li>
-<li class="toctree-l2"><a class="reference internal" href="#modules">Modules</a><ul>
-<li class="toctree-l3"><a class="reference internal" href="#module-get_mars_data">get_mars_data</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-prepare_flexpart">prepare_flexpart</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-tools">tools</a></li>
-<li class="toctree-l3"><a class="reference internal" href="#module-disaggregation">disaggregation</a></li>
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-<h1>Auto Generated Documentation<a class="headerlink" href="#auto-generated-documentation" title="Permalink to this headline">¶</a></h1>
-<div class="contents local topic" id="contents">
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-<li><a class="reference internal" href="#module-submit" id="id3">submit</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#classes" id="id4">Classes</a><ul>
-<li><a class="reference internal" href="#module-ControlFile" id="id5">ControlFile</a></li>
-<li><a class="reference internal" href="#module-EcFlexpart" id="id6">EcFlexpart</a></li>
-<li><a class="reference internal" href="#module-GribUtil" id="id7">GribUtil</a></li>
-<li><a class="reference internal" href="#module-MarsRetrieval" id="id8">MarsRetrieval</a></li>
-<li><a class="reference internal" href="#module-UioFiles" id="id9">UioFiles</a></li>
-</ul>
-</li>
-<li><a class="reference internal" href="#modules" id="id10">Modules</a><ul>
-<li><a class="reference internal" href="#module-get_mars_data" id="id11">get_mars_data</a></li>
-<li><a class="reference internal" href="#module-prepare_flexpart" id="id12">prepare_flexpart</a></li>
-<li><a class="reference internal" href="#module-tools" id="id13">tools</a></li>
-<li><a class="reference internal" href="#module-disaggregation" id="id14">disaggregation</a></li>
-</ul>
-</li>
-</ul>
-</div>
-<div class="section" id="porgrams">
-<h2><a class="toc-backref" href="#id1">Porgrams</a><a class="headerlink" href="#porgrams" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="module-install">
-<span id="install"></span><h3><a class="toc-backref" href="#id2">install</a><a class="headerlink" href="#module-install" title="Permalink to this headline">¶</a></h3>
-<p>This script installs the flex_extract program.</p>
-<p>Depending on the selected installation environment (locally or on the
-ECMWF server ecgate or cca) the program extracts the commandline
-arguments and the CONTROL file parameter and prepares the corresponding
-environment.
-The necessary files are collected in a tar-ball and placed
-at the target location. There its untared, the environment variables will
-be set and the Fortran code will be compiled.
-If the ECMWF environment is selected a job script is prepared and submitted
-for the remaining configurations after putting the tar-ball to the
-target ECMWF server.</p>
-<p>Type: install.py –help
-to get information about command line parameters.
-Read the documentation for usage instructions.</p>
-<dl class="function">
-<dt id="install.check_install_conditions">
-<code class="descclassname">install.</code><code class="descname">check_install_conditions</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#check_install_conditions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.check_install_conditions" title="Permalink to this definition">¶</a></dt>
-<dd><p>Checks a couple of necessary attributes and conditions
-for the installation such as if they exist and contain values.
-Otherwise set default values.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.del_convert_build">
-<code class="descclassname">install.</code><code class="descname">del_convert_build</code><span class="sig-paren">(</span><em>src_path</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#del_convert_build"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.del_convert_build" title="Permalink to this definition">¶</a></dt>
-<dd><p>Clean up the Fortran source directory and remove all
-build files (e.g. *.o, *.mod and CONVERT2)</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>src_path</strong> (<em>str</em>) – Path to the fortran source directory.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.get_install_cmdline_args">
-<code class="descclassname">install.</code><code class="descname">get_install_cmdline_args</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#get_install_cmdline_args"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.get_install_cmdline_args" title="Permalink to this definition">¶</a></dt>
-<dd><p>Decomposes the command line arguments and assigns them to variables.
-Apply default values for non mentioned arguments.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body"><strong>args</strong> – Contains the commandline arguments from script/program call.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">Namespace</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.install_via_gateway">
-<code class="descclassname">install.</code><code class="descname">install_via_gateway</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#install_via_gateway"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.install_via_gateway" title="Permalink to this definition">¶</a></dt>
-<dd><p>Perform the actual installation on local machine or prepare data
-transfer to remote gate and submit a job script which will
-install everything on the remote gate.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.main">
-<code class="descclassname">install.</code><code class="descname">main</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#main"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.main" title="Permalink to this definition">¶</a></dt>
-<dd><p>Controls the installation process. Calls the installation function
-if target is specified.</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.mk_compilejob">
-<code class="descclassname">install.</code><code class="descname">mk_compilejob</code><span class="sig-paren">(</span><em>makefile</em>, <em>target</em>, <em>ecuid</em>, <em>ecgid</em>, <em>fp_root</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#mk_compilejob"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.mk_compilejob" title="Permalink to this definition">¶</a></dt>
-<dd><p>Modifies the original job template file so that it is specified
-for the user and the environment were it will be applied. Result
-is stored in a new file “job.temp” in the python directory.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>makefile</strong> (<em>str</em>) – Name of the makefile which should be used to compile FORTRAN
-CONVERT2 program.</li>
-<li><strong>target</strong> (<em>str</em>) – The target where the installation should be done, e.g. the queue.</li>
-<li><strong>ecuid</strong> (<em>str</em>) – The user id on ECMWF server.</li>
-<li><strong>ecgid</strong> (<em>str</em>) – The group id on ECMWF server.</li>
-<li><strong>fp_root</strong> (<em>str</em>) – Path to the root directory of FLEXPART environment or flex_extract
-environment.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.mk_convert_build">
-<code class="descclassname">install.</code><code class="descname">mk_convert_build</code><span class="sig-paren">(</span><em>src_path</em>, <em>makefile</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#mk_convert_build"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.mk_convert_build" title="Permalink to this definition">¶</a></dt>
-<dd><p>Compiles the Fortran code and generates the executable.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>src_path</strong> (<em>str</em>) – Path to the fortran source directory.</li>
-<li><strong>makefile</strong> (<em>str</em>) – The name of the makefile which should be used.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.mk_env_vars">
-<code class="descclassname">install.</code><code class="descname">mk_env_vars</code><span class="sig-paren">(</span><em>ecuid</em>, <em>ecgid</em>, <em>gateway</em>, <em>destination</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#mk_env_vars"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.mk_env_vars" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates a file named ECMWF_ENV which contains the
-necessary environmental variables at ECMWF servers.
-It is based on the template ECMWF_ENV.template.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>ecuid</strong> (<em>str</em>) – The user id on ECMWF server.</li>
-<li><strong>ecgid</strong> (<em>str</em>) – The group id on ECMWF server.</li>
-<li><strong>gateway</strong> (<em>str</em>) – The gateway server the user is using.</li>
-<li><strong>destination</strong> (<em>str</em>) – The remote destination which is used to transfer files
-from ECMWF server to local gateway server.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.mk_job_template">
-<code class="descclassname">install.</code><code class="descname">mk_job_template</code><span class="sig-paren">(</span><em>ecuid</em>, <em>ecgid</em>, <em>gateway</em>, <em>destination</em>, <em>fp_root</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#mk_job_template"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.mk_job_template" title="Permalink to this definition">¶</a></dt>
-<dd><p>Modifies the original job template file so that it is specified
-for the user and the environment were it will be applied. Result
-is stored in a new file.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>ecuid</strong> (<em>str</em>) – The user id on ECMWF server.</li>
-<li><strong>ecgid</strong> (<em>str</em>) – The group id on ECMWF server.</li>
-<li><strong>gateway</strong> (<em>str</em>) – The gateway server the user is using.</li>
-<li><strong>destination</strong> (<em>str</em>) – The remote destination which is used to transfer files
-from ECMWF server to local gateway server.</li>
-<li><strong>fp_root</strong> (<em>str</em>) – Path to the root directory of FLEXPART environment or flex_extract
-environment.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.mk_tarball">
-<code class="descclassname">install.</code><code class="descname">mk_tarball</code><span class="sig-paren">(</span><em>tarball_path</em>, <em>target</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#mk_tarball"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.mk_tarball" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates a tarball with all necessary files which need to be sent to the
-installation directory.
-It does not matter if this is local or remote.
-Collects all python files, the Fortran source and makefiles,
-the ECMWF_ENV file, the CONTROL files as well as the
-template files.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>tarball_path</strong> (<em>str</em>) – The complete path to the tar file which will contain all
-relevant data for flex_extract.</li>
-<li><strong>target</strong> (<em>str</em>) – The queue where the job is submitted to.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="install.un_tarball">
-<code class="descclassname">install.</code><code class="descname">un_tarball</code><span class="sig-paren">(</span><em>tarball_path</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/install.html#un_tarball"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#install.un_tarball" title="Permalink to this definition">¶</a></dt>
-<dd><p>Extracts the given tarball into current directory.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>tarball_path</strong> (<em>str</em>) – The complete path to the tar file which will contain all
-relevant data for flex_extract.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</div>
-<div class="section" id="module-submit">
-<span id="submit"></span><h3><a class="toc-backref" href="#id3">submit</a><a class="headerlink" href="#module-submit" title="Permalink to this headline">¶</a></h3>
-<p>This script allows the user to extract meteorological fields from the ECMWF.</p>
-<p>It prepares the settings for retrieving the data from ECMWF servers and
-process the resulting files to prepare them for the use with FLEXPART or
-FLEXTRA.</p>
-<p>If it is supposed to work locally then it works through the necessary
-functions get_mars_data and prepare_flexpart. Otherwise it prepares
-a job script (korn shell) which will do the necessary work on the
-ECMWF server. This script will de submitted via the ecaccess command
-ecaccess-job-submit.</p>
-<p>This file can also be imported as a module which then contains the following
-functions:</p>
-<blockquote>
-<div><ul class="simple">
-<li>main - the main function of the script</li>
-<li>submit - calls mk_jobscript depending on operation mode and submits its</li>
-<li>mk_jobscript - creates the job script from a template</li>
-</ul>
-</div></blockquote>
-<p>Type: submit.py –help
-to get information about command line parameters.
-Read the documentation for usage instructions.</p>
-<dl class="function">
-<dt id="submit.main">
-<code class="descclassname">submit.</code><code class="descname">main</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/submit.html#main"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#submit.main" title="Permalink to this definition">¶</a></dt>
-<dd><p>Get the arguments from script call and from CONTROL file.
-Decides from the argument “queue” if the local version
-is done “queue=None” or the gateway version with “queue=ecgate”
-or “queue=cca”.</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="submit.mk_jobscript">
-<code class="descclassname">submit.</code><code class="descname">mk_jobscript</code><span class="sig-paren">(</span><em>jtemplate</em>, <em>job_file</em>, <em>clist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/submit.html#mk_jobscript"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#submit.mk_jobscript" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates the job script from template.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>jtemplate</strong> (<em>str</em>) – Job template file from sub-directory “_templates” for
-submission to ECMWF. It contains all necessary
-module and variable settings for the ECMWF environment as well as
-the job call and mail report instructions.
-Default is “job.temp”.</li>
-<li><strong>job_file</strong> (<em>str</em>) – Path to the job script file.</li>
-<li><strong>clist</strong> (<em>list of str</em>) – Contains all necessary parameters for ECMWF CONTROL file.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="submit.submit">
-<code class="descclassname">submit.</code><code class="descname">submit</code><span class="sig-paren">(</span><em>jtemplate</em>, <em>c</em>, <em>queue</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/submit.html#submit"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#submit.submit" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prepares the job script and submits it to the specified queue.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>jtemplate</strong> (<em>str</em>) – Job template file from sub-directory “_templates” for
-submission to ECMWF. It contains all necessary
-module and variable settings for the ECMWF environment as well as
-the job call and mail report instructions.
-Default is “job.temp”.</li>
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-<li><strong>queue</strong> (<em>str</em>) – Name of queue for submission to ECMWF (e.g. ecgate or cca )</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</div>
-</div>
-<div class="section" id="classes">
-<h2><a class="toc-backref" href="#id4">Classes</a><a class="headerlink" href="#classes" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="module-ControlFile">
-<span id="controlfile"></span><h3><a class="toc-backref" href="#id5">ControlFile</a><a class="headerlink" href="#module-ControlFile" title="Permalink to this headline">¶</a></h3>
-<dl class="class">
-<dt id="ControlFile.ControlFile">
-<em class="property">class </em><code class="descclassname">ControlFile.</code><code class="descname">ControlFile</code><span class="sig-paren">(</span><em>filename</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/ControlFile.html#ControlFile"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#ControlFile.ControlFile" title="Permalink to this definition">¶</a></dt>
-<dd><p>Contains the information which are stored in the CONTROL files.</p>
-<p>The CONTROL file is the steering part of the FLEXPART extraction
-software. All necessary parameters needed to retrieve the data fields
-from the MARS archive for driving FLEXPART are set in a CONTROL file.
-Some specific parameters like the start and end dates can be overwritten
-by the command line parameters, but in generel all parameters needed
-for a complete set of fields for FLEXPART can be set in the CONTROL file.</p>
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.controlfile">
-<code class="descname">controlfile</code><a class="headerlink" href="#ControlFile.ControlFile.controlfile" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The name of the control file to be processed. Default value is the
-filename passed to the init function when initialised.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.start_date">
-<code class="descname">start_date</code><a class="headerlink" href="#ControlFile.ControlFile.start_date" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The first day of the retrieval period. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.end_date">
-<code class="descname">end_date</code><a class="headerlink" href="#ControlFile.ControlFile.end_date" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The last day of the retrieval period. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.date_chunk">
-<code class="descname">date_chunk</code><a class="headerlink" href="#ControlFile.ControlFile.date_chunk" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Length of period for a single mars retrieval. Default value is 3.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.dtime">
-<code class="descname">dtime</code><a class="headerlink" href="#ControlFile.ControlFile.dtime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The time step in hours. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.basetime">
-<code class="descname">basetime</code><a class="headerlink" href="#ControlFile.ControlFile.basetime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – The time for a half day retrieval. The 12 hours upfront are to be
-retrieved. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.maxstep">
-<code class="descname">maxstep</code><a class="headerlink" href="#ControlFile.ControlFile.maxstep" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – The maximum forecast step for non flux data. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.type">
-<code class="descname">type</code><a class="headerlink" href="#ControlFile.ControlFile.type" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – List of field type per retrieving hour. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.time">
-<code class="descname">time</code><a class="headerlink" href="#ControlFile.ControlFile.time" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – List of retrieving times in hours. Default valuer is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.step">
-<code class="descname">step</code><a class="headerlink" href="#ControlFile.ControlFile.step" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str or str</em> – List of forecast time steps in hours for non flux data.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.acctype">
-<code class="descname">acctype</code><a class="headerlink" href="#ControlFile.ControlFile.acctype" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The field type for the accumulated forecast fields.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.acctime">
-<code class="descname">acctime</code><a class="headerlink" href="#ControlFile.ControlFile.acctime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The starting time of the accumulated forecasts. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.accmaxstep">
-<code class="descname">accmaxstep</code><a class="headerlink" href="#ControlFile.ControlFile.accmaxstep" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – The maximum forecast step for the accumulated forecast fields
-(flux data). Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.marsclass">
-<code class="descname">marsclass</code><a class="headerlink" href="#ControlFile.ControlFile.marsclass" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Characterisation of dataset. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.dataset">
-<code class="descname">dataset</code><a class="headerlink" href="#ControlFile.ControlFile.dataset" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – For public datasets there is the specific naming and parameter
-dataset which has to be used to characterize the type of
-data. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.stream">
-<code class="descname">stream</code><a class="headerlink" href="#ControlFile.ControlFile.stream" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Identifies the forecasting system used to generate the data.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.number">
-<code class="descname">number</code><a class="headerlink" href="#ControlFile.ControlFile.number" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Selects the member in ensemble forecast run. Default value is ‘OFF’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.expver">
-<code class="descname">expver</code><a class="headerlink" href="#ControlFile.ControlFile.expver" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The version number of the dataset. Default value is ‘1’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.gaussian">
-<code class="descname">gaussian</code><a class="headerlink" href="#ControlFile.ControlFile.gaussian" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – This parameter is deprecated and should no longer be used.
-Specifies the desired type of Gaussian grid for the output.
-Default value is an empty string ‘’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.grid">
-<code class="descname">grid</code><a class="headerlink" href="#ControlFile.ControlFile.grid" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the output grid which can be either a Gaussian grid
-or a Latitude/Longitude grid. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.area">
-<code class="descname">area</code><a class="headerlink" href="#ControlFile.ControlFile.area" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the desired sub-area of data to be extracted.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.left">
-<code class="descname">left</code><a class="headerlink" href="#ControlFile.ControlFile.left" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The western most longitude of the area to be extracted.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.lower">
-<code class="descname">lower</code><a class="headerlink" href="#ControlFile.ControlFile.lower" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The southern most latitude of the area to be extracted.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.upper">
-<code class="descname">upper</code><a class="headerlink" href="#ControlFile.ControlFile.upper" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The northern most latitued of the area to be extracted.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.right">
-<code class="descname">right</code><a class="headerlink" href="#ControlFile.ControlFile.right" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The eastern most longitude of the area to be extracted.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.level">
-<code class="descname">level</code><a class="headerlink" href="#ControlFile.ControlFile.level" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the maximum level. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.levelist">
-<code class="descname">levelist</code><a class="headerlink" href="#ControlFile.ControlFile.levelist" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the required level list. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.resol">
-<code class="descname">resol</code><a class="headerlink" href="#ControlFile.ControlFile.resol" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the desired triangular truncation of retrieved data,
-before carrying out any other selected post-processing.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.gauss">
-<code class="descname">gauss</code><a class="headerlink" href="#ControlFile.ControlFile.gauss" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select gaussian fields (1) or regular lat/lon (0).
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.accuracy">
-<code class="descname">accuracy</code><a class="headerlink" href="#ControlFile.ControlFile.accuracy" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Specifies the number of bits per value to be used in the
-generated GRIB coded fields. Default value is 24.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.omega">
-<code class="descname">omega</code><a class="headerlink" href="#ControlFile.ControlFile.omega" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select omega retrieval (1) or not (0). Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.omegadiff">
-<code class="descname">omegadiff</code><a class="headerlink" href="#ControlFile.ControlFile.omegadiff" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to decide to calculate Omega and Dps/Dt from continuity
-equation for diagnostic purposes (1) or not (0). Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.eta">
-<code class="descname">eta</code><a class="headerlink" href="#ControlFile.ControlFile.eta" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select direct retrieval of etadot from MARS (1) or
-wether it has to be calculated (0). Then Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.etadiff">
-<code class="descname">etadiff</code><a class="headerlink" href="#ControlFile.ControlFile.etadiff" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select calculation of etadot and Dps/Dt from continuity
-equation for diagnostic purposes (1) or not (0). Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.etapar">
-<code class="descname">etapar</code><a class="headerlink" href="#ControlFile.ControlFile.etapar" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – GRIB parameter Id for etadot fields. Default value is 77.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.dpdeta">
-<code class="descname">dpdeta</code><a class="headerlink" href="#ControlFile.ControlFile.dpdeta" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select multiplication of etadot with dpdeta.
-Default value is 1.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.smooth">
-<code class="descname">smooth</code><a class="headerlink" href="#ControlFile.ControlFile.smooth" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Spectral truncation of ETADOT after calculation on Gaussian grid.
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.format">
-<code class="descname">format</code><a class="headerlink" href="#ControlFile.ControlFile.format" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The format of the GRIB data. Default value is ‘GRIB1’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.addpar">
-<code class="descname">addpar</code><a class="headerlink" href="#ControlFile.ControlFile.addpar" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – List of additional surface level ECMWF parameter to be retrieved.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.prefix">
-<code class="descname">prefix</code><a class="headerlink" href="#ControlFile.ControlFile.prefix" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Prefix string for the final FLEXPART/FLEXTRA ready input files.
-Default value is ‘EN’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.cwc">
-<code class="descname">cwc</code><a class="headerlink" href="#ControlFile.ControlFile.cwc" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select wether the sum of cloud liquid water content and
-cloud ice water content should be retrieved. Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.wrf">
-<code class="descname">wrf</code><a class="headerlink" href="#ControlFile.ControlFile.wrf" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select further parameters for retrievment to support
-WRF simulations. Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ecfsdir">
-<code class="descname">ecfsdir</code><a class="headerlink" href="#ControlFile.ControlFile.ecfsdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the ECMWF storage ‘ectmp:/${USER}/econdemand/’</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.mailfail">
-<code class="descname">mailfail</code><a class="headerlink" href="#ControlFile.ControlFile.mailfail" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – Email list for sending error log files from ECMWF servers.
-The email addresses should be seperated by a comma.
-Default value is [‘${USER}’].</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.mailops">
-<code class="descname">mailops</code><a class="headerlink" href="#ControlFile.ControlFile.mailops" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – Email list for sending operational log files from ECMWF servers.
-The email addresses should be seperated by a comma.
-Default value is [‘${USER}’].</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.grib2flexpart">
-<code class="descname">grib2flexpart</code><a class="headerlink" href="#ControlFile.ControlFile.grib2flexpart" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int 0</em> – Switch to select generation of preprocessed FLEXPART files “.fp”.
-If it is selected, the program grib2flexpart will try
-to convert the flex_extract output files into “.fp” format.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ecstorage">
-<code class="descname">ecstorage</code><a class="headerlink" href="#ControlFile.ControlFile.ecstorage" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select storage of FLEXPART ready output files
-in the ECFS file system. Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ectrans">
-<code class="descname">ectrans</code><a class="headerlink" href="#ControlFile.ControlFile.ectrans" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select the transfer of FLEXPART ready output files
-to the gateway server. Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.inputdir">
-<code class="descname">inputdir</code><a class="headerlink" href="#ControlFile.ControlFile.inputdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the temporary directory for the retrieval grib files and
-other processing files. Default value is _config.PATH_INPUT_DIR.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.outputdir">
-<code class="descname">outputdir</code><a class="headerlink" href="#ControlFile.ControlFile.outputdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the final directory where the final FLEXPART ready input
-files are stored. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.flexextractdir">
-<code class="descname">flexextractdir</code><a class="headerlink" href="#ControlFile.ControlFile.flexextractdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the flex_extract root directory. Default value is
-_config.PATH_FLEXEXTRACT_DIR.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.exedir">
-<code class="descname">exedir</code><a class="headerlink" href="#ControlFile.ControlFile.exedir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the FORTRAN executable file. Default value is
-_config.PATH_FORTRAN_SRC.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.flexpartdir">
-<code class="descname">flexpartdir</code><a class="headerlink" href="#ControlFile.ControlFile.flexpartdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to a FLEXPART root directory. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.makefile">
-<code class="descname">makefile</code><a class="headerlink" href="#ControlFile.ControlFile.makefile" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Name of the makefile to be used for the Fortran program.
-Default value is ‘Makefile.gfortran’.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.destination">
-<code class="descname">destination</code><a class="headerlink" href="#ControlFile.ControlFile.destination" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The remote destination which is used to transfer files
-from ECMWF server to local gateway server. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.gateway">
-<code class="descname">gateway</code><a class="headerlink" href="#ControlFile.ControlFile.gateway" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The gateway server the user is using. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ecuid">
-<code class="descname">ecuid</code><a class="headerlink" href="#ControlFile.ControlFile.ecuid" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The user id on ECMWF server. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ecgid">
-<code class="descname">ecgid</code><a class="headerlink" href="#ControlFile.ControlFile.ecgid" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The group id on ECMWF server. Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.install_target">
-<code class="descname">install_target</code><a class="headerlink" href="#ControlFile.ControlFile.install_target" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Defines the location where the installation is to be done.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.debug">
-<code class="descname">debug</code><a class="headerlink" href="#ControlFile.ControlFile.debug" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to keep temporary files at the end of postprocessing (1) or
-to delete all temporary files except the final output files (0).
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.oper">
-<code class="descname">oper</code><a class="headerlink" href="#ControlFile.ControlFile.oper" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to prepare the operational job script. Start date, end date and
-basetime will be prepared with environment variables.
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.request">
-<code class="descname">request</code><a class="headerlink" href="#ControlFile.ControlFile.request" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select between just retrieving the data (0), writing the mars
-parameter values to a csv file (1) or doing both (2).
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.public">
-<code class="descname">public</code><a class="headerlink" href="#ControlFile.ControlFile.public" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select kind of ECMWF Web Api access and the
-possible data sets. Public data sets (1) and Memberstate data sets (0).
-Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.ec_api">
-<code class="descname">ec_api</code><a class="headerlink" href="#ControlFile.ControlFile.ec_api" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>boolean</em> – Tells wether the ECMWF Web API was able to load or not.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.cds_api">
-<code class="descname">cds_api</code><a class="headerlink" href="#ControlFile.ControlFile.cds_api" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>boolean</em> – Tells wether the CDS API was able to load or not.
-Default value is None.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.purefc">
-<code class="descname">purefc</code><a class="headerlink" href="#ControlFile.ControlFile.purefc" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to decide wether the job is a pure forecast retrieval or
-coupled with analysis data. Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.rrint">
-<code class="descname">rrint</code><a class="headerlink" href="#ControlFile.ControlFile.rrint" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch to select between old precipitation disaggregation method (0)
-or the new IA3 disaggegration method (1). Default value is 0.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="ControlFile.ControlFile.logicals">
-<code class="descname">logicals</code><a class="headerlink" href="#ControlFile.ControlFile.logicals" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – List of the names of logical switches which controls the flow
-of the program. Default list is [‘gauss’, ‘omega’, ‘omegadiff’, ‘eta’,
-‘etadiff’, ‘dpdeta’, ‘cwc’, ‘wrf’, ‘grib2flexpart’, ‘ecstorage’,
-‘ectrans’, ‘debug’, ‘request’, ‘public’, ‘purefc’, ‘rrint’]</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="ControlFile.ControlFile.assign_args_to_control">
-<code class="descname">assign_args_to_control</code><span class="sig-paren">(</span><em>args</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/ControlFile.html#ControlFile.assign_args_to_control"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#ControlFile.ControlFile.assign_args_to_control" title="Permalink to this definition">¶</a></dt>
-<dd><p>Overwrites the existing ControlFile instance attributes with
-the command line arguments.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>args</strong> (<em>Namespace</em>) – Contains the commandline arguments from script/program call.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="ControlFile.ControlFile.assign_envs_to_control">
-<code class="descname">assign_envs_to_control</code><span class="sig-paren">(</span><em>envs</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/ControlFile.html#ControlFile.assign_envs_to_control"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#ControlFile.ControlFile.assign_envs_to_control" title="Permalink to this definition">¶</a></dt>
-<dd><p>Assigns the ECMWF environment parameter.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>envs</strong> (<em>dict of str</em>) – Contains the ECMWF environment parameternames “ECUID”, “ECGID”,
-“DESTINATION” and “GATEWAY” with its corresponding values.
-They were read from the file “ECMWF_ENV”.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="ControlFile.ControlFile.check_conditions">
-<code class="descname">check_conditions</code><span class="sig-paren">(</span><em>queue</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/ControlFile.html#ControlFile.check_conditions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#ControlFile.ControlFile.check_conditions" title="Permalink to this definition">¶</a></dt>
-<dd><p>Checks a couple of necessary attributes and conditions,
-such as if they exist and contain values.
-Otherwise set default values.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>queue</strong> (<em>str</em>) – Name of the queue if submitted to the ECMWF servers.
-Used to check if ecuid, ecgid, gateway and destination
-are set correctly and are not empty.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="ControlFile.ControlFile.to_list">
-<code class="descname">to_list</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/ControlFile.html#ControlFile.to_list"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#ControlFile.ControlFile.to_list" title="Permalink to this definition">¶</a></dt>
-<dd><p>Just generates a list of strings containing the attributes and
-assigned values except the attributes “_expanded”, “exedir”,
-“flexextractdir” and “flexpartdir”.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body"><strong>l</strong> – A sorted list of the all ControlFile class attributes with
-their values except the attributes “_expanded”, “exedir”,
-“flexextractdir” and “flexpartdir”.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">list of *</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</dd></dl>
-
-</div>
-<div class="section" id="module-EcFlexpart">
-<span id="ecflexpart"></span><h3><a class="toc-backref" href="#id6">EcFlexpart</a><a class="headerlink" href="#module-EcFlexpart" title="Permalink to this headline">¶</a></h3>
-<dl class="class">
-<dt id="EcFlexpart.EcFlexpart">
-<em class="property">class </em><code class="descclassname">EcFlexpart.</code><code class="descname">EcFlexpart</code><span class="sig-paren">(</span><em>c</em>, <em>fluxes=False</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart" title="Permalink to this definition">¶</a></dt>
-<dd><p>Class to represent FLEXPART specific ECMWF data.</p>
-<p>FLEXPART needs grib files in a specifc format. All necessary data fields
-for one time step are stored in a single file. The class represents an
-instance with all the parameter and settings necessary for retrieving
-MARS data and modifing them so they are fitting FLEXPART needs. The class
-is able to disaggregate the fluxes and convert grid types to the one needed
-by FLEXPART, therefore using the FORTRAN program.</p>
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.mreq_count">
-<code class="descname">mreq_count</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.mreq_count" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Counter for the number of generated mars requests.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.inputdir">
-<code class="descname">inputdir</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.inputdir" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Path to the directory where the retrieved data is stored.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.dataset">
-<code class="descname">dataset</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.dataset" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – For public datasets there is the specific naming and parameter
-dataset which has to be used to characterize the type of
-data.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.basetime">
-<code class="descname">basetime</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.basetime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – The time for a half day retrieval. The 12 hours upfront are to be
-retrieved.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.dtime">
-<code class="descname">dtime</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.dtime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Time step in hours.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.acctype">
-<code class="descname">acctype</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.acctype" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The field type for the accumulated forecast fields.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.acctime">
-<code class="descname">acctime</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.acctime" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The starting time from the accumulated forecasts.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.accmaxstep">
-<code class="descname">accmaxstep</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.accmaxstep" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The maximum forecast step for the accumulated forecast fields.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.marsclass">
-<code class="descname">marsclass</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.marsclass" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Characterisation of dataset.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.stream">
-<code class="descname">stream</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.stream" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Identifies the forecasting system used to generate the data.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.number">
-<code class="descname">number</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.number" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Selects the member in ensemble forecast run.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.resol">
-<code class="descname">resol</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.resol" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the desired triangular truncation of retrieved data,
-before carrying out any other selected post-processing.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.accuracy">
-<code class="descname">accuracy</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.accuracy" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the number of bits per value to be used in the
-generated GRIB coded fields.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.addpar">
-<code class="descname">addpar</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.addpar" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – List of additional parameters to be retrieved.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.level">
-<code class="descname">level</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.level" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the maximum level.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.expver">
-<code class="descname">expver</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.expver" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – The version of the dataset.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.levelist">
-<code class="descname">levelist</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.levelist" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the required levels.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.glevelist">
-<code class="descname">glevelist</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.glevelist" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the required levels for gaussian grids.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.gaussian">
-<code class="descname">gaussian</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.gaussian" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – This parameter is deprecated and should no longer be used.
-Specifies the desired type of Gaussian grid for the output.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.grid">
-<code class="descname">grid</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.grid" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the output grid which can be either a Gaussian grid
-or a Latitude/Longitude grid.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.area">
-<code class="descname">area</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.area" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Specifies the desired sub-area of data to be extracted.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.purefc">
-<code class="descname">purefc</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.purefc" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Switch for definition of pure forecast mode or not.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.outputfilelist">
-<code class="descname">outputfilelist</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.outputfilelist" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – The final list of FLEXPART ready input files.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.types">
-<code class="descname">types</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.types" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>dictionary</em> – Determines the combination of type of fields, time and forecast step
-to be retrieved.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.params">
-<code class="descname">params</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.params" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>dictionary</em> – Collection of grid types and their corresponding parameters,
-levels, level types and the grid definition.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.server">
-<code class="descname">server</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.server" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>ECMWFService or ECMWFDataServer</em> – This is the connection to the ECMWF data servers.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.public">
-<code class="descname">public</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.public" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Decides which Web API Server version is used.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="EcFlexpart.EcFlexpart.dates">
-<code class="descname">dates</code><a class="headerlink" href="#EcFlexpart.EcFlexpart.dates" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Contains start and end date of the retrieval in the format
-“YYYYMMDD/to/YYYYMMDD”</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.calc_extra_elda">
-<code class="descname">calc_extra_elda</code><span class="sig-paren">(</span><em>path</em>, <em>prefix</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.calc_extra_elda"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.calc_extra_elda" title="Permalink to this definition">¶</a></dt>
-<dd><p>Calculates extra ensemble members for ELDA - Stream.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>path</strong> (<em>str</em>) – Path to the output files.</li>
-<li><strong>prefix</strong> (<em>str</em>) – The prefix of the output filenames as defined in Control file.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.create">
-<code class="descname">create</code><span class="sig-paren">(</span><em>inputfiles</em>, <em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.create"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.create" title="Permalink to this definition">¶</a></dt>
-<dd><p>An index file will be created which depends on the combination
-of “date”, “time” and “stepRange” values. This is used to iterate
-over all messages in each grib file which were passed through the
-parameter “inputfiles” to seperate specific parameters into fort.*
-files. Afterwards the FORTRAN program is called to convert
-the data fields all to the same grid and put them in one file
-per unique time step (combination of “date”, “time” and
-“stepRange”).</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p class="last">This method is based on the ECMWF example index.py
-<a class="reference external" href="https://software.ecmwf.int/wiki/display/GRIB/index.py">https://software.ecmwf.int/wiki/display/GRIB/index.py</a></p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>inputfiles</strong> (<a class="reference internal" href="#UioFiles.UioFiles" title="UioFiles.UioFiles"><em>UioFiles</em></a>) – Contains a list of files.</li>
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.deacc_fluxes">
-<code class="descname">deacc_fluxes</code><span class="sig-paren">(</span><em>inputfiles</em>, <em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.deacc_fluxes"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.deacc_fluxes" title="Permalink to this definition">¶</a></dt>
-<dd><p>De-accumulate and disaggregate flux data.</p>
-<p>Goes through all flux fields in ordered time and de-accumulate
-the fields. Afterwards the fields are disaggregated in time.
-Different versions of disaggregation is provided for rainfall
-data (darain, modified linear) and the surface fluxes and
-stress data (dapoly, cubic polynomial).</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>inputfiles</strong> (<a class="reference internal" href="#UioFiles.UioFiles" title="UioFiles.UioFiles"><em>UioFiles</em></a>) – Contains the list of files that contain flux data.</li>
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.prepare_fp_files">
-<code class="descname">prepare_fp_files</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.prepare_fp_files"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.prepare_fp_files" title="Permalink to this definition">¶</a></dt>
-<dd><p>Conversion of GRIB files to FLEXPART binary format.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.process_output">
-<code class="descname">process_output</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.process_output"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.process_output" title="Permalink to this definition">¶</a></dt>
-<dd><p>Postprocessing of FLEXPART input files.</p>
-<p>The grib files are postprocessed depending on the selection in
-CONTROL file. The resulting files are moved to the output
-directory if its not equal to the input directory.
-The following modifications might be done if
-properly switched in CONTROL file:
-GRIB2 - Conversion to GRIB2
-ECTRANS - Transfer of files to gateway server
-ECSTORAGE - Storage at ECMWF server</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.retrieve">
-<code class="descname">retrieve</code><span class="sig-paren">(</span><em>server</em>, <em>dates</em>, <em>public</em>, <em>request</em>, <em>inputdir='.'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.retrieve"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.retrieve" title="Permalink to this definition">¶</a></dt>
-<dd><p>Finalizing the retrieval information by setting final details
-depending on grid type.
-Prepares MARS retrievals per grid type and submits them.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>server</strong> (<em>ECMWFService</em><em> or </em><em>ECMWFDataServer</em>) – The connection to the ECMWF server. This is different
-for member state users which have full access and non
-member state users which have only access to the public
-data sets. The decision is made from command line argument
-“public”; for public access its True (ECMWFDataServer)
-for member state users its False (ECMWFService)</li>
-<li><strong>dates</strong> (<em>str</em>) – Contains start and end date of the retrieval in the format
-“YYYYMMDD/to/YYYYMMDD”</li>
-<li><strong>request</strong> (<em>int</em>) – Selects the mode of retrieval.
-0: Retrieves the data from ECMWF.
-1: Prints the mars requests to an output file.
-2: Retrieves the data and prints the mars request.</li>
-<li><strong>inputdir</strong> (<em>str</em><em>, </em><em>optional</em>) – Path to the directory where the retrieved data is about
-to be stored. The default is the current directory (‘.’).</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="EcFlexpart.EcFlexpart.write_namelist">
-<code class="descname">write_namelist</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/EcFlexpart.html#EcFlexpart.write_namelist"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#EcFlexpart.EcFlexpart.write_namelist" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates a namelist file in the temporary directory and writes
-the following values to it: maxl, maxb, mlevel,
-mlevelist, mnauf, metapar, rlo0, rlo1, rla0, rla1,
-momega, momegadiff, mgauss, msmooth, meta, metadiff, mdpdeta</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-<li><strong>filename</strong> (<em>str</em>) – Name of the namelist file.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</dd></dl>
-
-</div>
-<div class="section" id="module-GribUtil">
-<span id="gributil"></span><h3><a class="toc-backref" href="#id7">GribUtil</a><a class="headerlink" href="#module-GribUtil" title="Permalink to this headline">¶</a></h3>
-<dl class="class">
-<dt id="GribUtil.GribUtil">
-<em class="property">class </em><code class="descclassname">GribUtil.</code><code class="descname">GribUtil</code><span class="sig-paren">(</span><em>filenames</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/GribUtil.html#GribUtil"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#GribUtil.GribUtil" title="Permalink to this definition">¶</a></dt>
-<dd><p>Class for GRIB utilities (new methods) based on GRIB API</p>
-<dl class="method">
-<dt id="GribUtil.GribUtil.copy_dummy_msg">
-<code class="descname">copy_dummy_msg</code><span class="sig-paren">(</span><em>filename_in</em>, <em>selectWhere=True</em>, <em>keynames=[]</em>, <em>keyvalues=[]</em>, <em>filemode='w'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/GribUtil.html#GribUtil.copy_dummy_msg"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#GribUtil.GribUtil.copy_dummy_msg" title="Permalink to this definition">¶</a></dt>
-<dd><p>Add the content of another input grib file to the objects file but
-only messages corresponding to keys/values passed to the function.
-The selectWhere switch decides if to copy the keys equal to (True) or
-different to (False) the keynames/keyvalues list passed to the function.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>filename_in</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>) – Filename of the input file to read the grib messages from.</li>
-<li><strong>selectWhere</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">boolean</span></code>, optional) – Decides if to copy the keynames and values equal to (True) or
-different to (False) the keynames/keyvalues list passed to the
-function. Default is True.</li>
-<li><strong>keynames</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – List of keynames. Default is an empty list.</li>
-<li><strong>keyvalues</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – List of keyvalues. Default is an empty list.</li>
-<li><strong>filemode</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Sets the mode for the output file. Default is “w”.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="GribUtil.GribUtil.get_keys">
-<code class="descname">get_keys</code><span class="sig-paren">(</span><em>keynames</em>, <em>wherekeynames=[]</em>, <em>wherekeyvalues=[]</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/GribUtil.html#GribUtil.get_keys"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#GribUtil.GribUtil.get_keys" title="Permalink to this definition">¶</a></dt>
-<dd><p>Get keyvalues for a given list of keynames a where statement
-can be given (list of key and list of values)</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>keynames</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>) – List of keynames.</li>
-<li><strong>wherekeynames</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Default value is an empty list.</li>
-<li><strong>wherekeyvalues</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Default value is an empty list.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>return_list</strong> – List of keyvalues for given keynames.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code></p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="GribUtil.GribUtil.index">
-<code class="descname">index</code><span class="sig-paren">(</span><em>index_keys=['mars'], index_file='my.idx'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/GribUtil.html#GribUtil.index"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#GribUtil.GribUtil.index" title="Permalink to this definition">¶</a></dt>
-<dd><p>Create index file from a list of files if it does not exist or
-read an index file.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>index_keys</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Contains the list of key parameter names from
-which the index is to be created.
-Default is a list with a single entry string “mars”.</li>
-<li><strong>index_file</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Filename where the indices are stored.
-Default is “my.idx”.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>iid</strong> – Grib index id.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last"><code class="xref py py-obj docutils literal notranslate"><span class="pre">integer</span></code></p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="method">
-<dt id="GribUtil.GribUtil.set_keys">
-<code class="descname">set_keys</code><span class="sig-paren">(</span><em>fromfile</em>, <em>keynames</em>, <em>keyvalues</em>, <em>wherekeynames=[]</em>, <em>wherekeyvalues=[]</em>, <em>strict=False</em>, <em>filemode='w'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/GribUtil.html#GribUtil.set_keys"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#GribUtil.GribUtil.set_keys" title="Permalink to this definition">¶</a></dt>
-<dd><p>Opens the file to read the grib messages and then write
-the selected messages (with wherekeys) to a new output file.
-Also, the keyvalues of the passed list of keynames are set.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>fromfile</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>) – Filename of the input file to read the grib messages from.</li>
-<li><strong>keynames</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>) – List of keynames to set in the selected messages.
-Default is an empty list.</li>
-<li><strong>keyvalues</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>) – List of keyvalues to set in the selected messages.
-Default is an empty list.</li>
-<li><strong>wherekeynames</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – List of keynames to select correct message.
-Default value is an empty list.</li>
-<li><strong>wherekeyvalues</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – List of keyvalues for keynames to select correct message.
-Default value is an empty list.</li>
-<li><strong>strict</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">boolean</span></code>, optional) – Decides if everything from keynames and keyvalues
-is written out the grib file (False) or only those
-meeting the where statement (True). Default is False.</li>
-<li><strong>filemode</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">string</span></code>, optional) – Sets the mode for the output file. Default is “w”.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</dd></dl>
-
-</div>
-<div class="section" id="module-MarsRetrieval">
-<span id="marsretrieval"></span><h3><a class="toc-backref" href="#id8">MarsRetrieval</a><a class="headerlink" href="#module-MarsRetrieval" title="Permalink to this headline">¶</a></h3>
-<dl class="class">
-<dt id="MarsRetrieval.MarsRetrieval">
-<em class="property">class </em><code class="descclassname">MarsRetrieval.</code><code class="descname">MarsRetrieval</code><span class="sig-paren">(</span><em>server</em>, <em>public</em>, <em>marsclass='EA'</em>, <em>dataset=''</em>, <em>type=''</em>, <em>levtype=''</em>, <em>levelist=''</em>, <em>repres=''</em>, <em>date=''</em>, <em>resol=''</em>, <em>stream=''</em>, <em>area=''</em>, <em>time=''</em>, <em>step=''</em>, <em>expver='1'</em>, <em>number=''</em>, <em>accuracy=''</em>, <em>grid=''</em>, <em>gaussian=''</em>, <em>target=''</em>, <em>param=''</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/MarsRetrieval.html#MarsRetrieval"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#MarsRetrieval.MarsRetrieval" title="Permalink to this definition">¶</a></dt>
-<dd><p>Specific syntax and content for submission of MARS retrievals.</p>
-<p>A MARS revtrieval has a specific syntax with a selection of keywords and
-their corresponding values. This class provides the necessary functions
-by displaying the selected parameters and their values and the actual
-retrievement of the data through a mars request or a Python web api
-interface. The initialization already expects all the keyword values.</p>
-<p>A description of MARS keywords/arguments and examples of their
-values can be found here:
-<a class="reference external" href="https://software.ecmwf.int/wiki/display/UDOC/">https://software.ecmwf.int/wiki/display/UDOC/</a> Identification+keywords#Identificationkeywords-class</p>
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.server">
-<code class="descname">server</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.server" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>ECMWFService or ECMWFDataServer</em> – This is the connection to the ECMWF data servers.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.public">
-<code class="descname">public</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.public" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>int</em> – Decides which Web API Server version is used.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.marsclass">
-<code class="descname">marsclass</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.marsclass" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Characterisation of dataset.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.dataset">
-<code class="descname">dataset</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.dataset" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – For public datasets there is the specific naming and parameter
-dataset which has to be used to characterize the type of
-data.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.type">
-<code class="descname">type</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.type" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Determines the type of fields to be retrieved.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.levtype">
-<code class="descname">levtype</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.levtype" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Denotes type of level.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.levelist">
-<code class="descname">levelist</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.levelist" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the required levels.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.repres">
-<code class="descname">repres</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.repres" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Selects the representation of the archived data.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.date">
-<code class="descname">date</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.date" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the Analysis date, the Forecast base date or
-Observations date.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.resol">
-<code class="descname">resol</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.resol" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the desired triangular truncation of retrieved data,
-before carrying out any other selected post-processing.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.stream">
-<code class="descname">stream</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.stream" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Identifies the forecasting system used to generate the data.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.area">
-<code class="descname">area</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.area" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the desired sub-area of data to be extracted.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.time">
-<code class="descname">time</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.time" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the time of the data in hours and minutes.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.step">
-<code class="descname">step</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.step" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the forecast time step from forecast base time.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.expver">
-<code class="descname">expver</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.expver" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – The version of the dataset.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.number">
-<code class="descname">number</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.number" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Selects the member in ensemble forecast run.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.accuracy">
-<code class="descname">accuracy</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.accuracy" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the number of bits per value to be used in the
-generated GRIB coded fields.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.grid">
-<code class="descname">grid</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.grid" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the output grid which can be either a Gaussian grid
-or a Latitude/Longitude grid.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.gaussian">
-<code class="descname">gaussian</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.gaussian" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – This parameter is deprecated and should no longer be used.
-Specifies the desired type of Gaussian grid for the output.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.target">
-<code class="descname">target</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.target" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies a file into which data is to be written after
-retrieval or manipulation.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="MarsRetrieval.MarsRetrieval.param">
-<code class="descname">param</code><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.param" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str, optional</em> – Specifies the meteorological parameter.</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="MarsRetrieval.MarsRetrieval.data_retrieve">
-<code class="descname">data_retrieve</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/MarsRetrieval.html#MarsRetrieval.data_retrieve"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.data_retrieve" title="Permalink to this definition">¶</a></dt>
-<dd><p>Submits a MARS retrieval. Depending on the existence of
-ECMWF Web-API or CDS API it is submitted via Python or a
-subprocess in the Shell. The parameter for the mars retrieval
-are taken from the defined class attributes.</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="MarsRetrieval.MarsRetrieval.display_info">
-<code class="descname">display_info</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/MarsRetrieval.html#MarsRetrieval.display_info"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.display_info" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prints all class attributes and their values to the
-standard output.</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="MarsRetrieval.MarsRetrieval.print_infodata_csv">
-<code class="descname">print_infodata_csv</code><span class="sig-paren">(</span><em>inputdir</em>, <em>request_number</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/MarsRetrieval.html#MarsRetrieval.print_infodata_csv"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#MarsRetrieval.MarsRetrieval.print_infodata_csv" title="Permalink to this definition">¶</a></dt>
-<dd><p>Write all request parameter in alpabetical order into a “csv” file.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>inputdir</strong> (<em>str</em>) – The path where all data from the retrievals are stored.</li>
-<li><strong>request_number</strong> (<em>int</em>) – Number of mars requests for flux and non-flux data.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</dd></dl>
-
-</div>
-<div class="section" id="module-UioFiles">
-<span id="uiofiles"></span><h3><a class="toc-backref" href="#id9">UioFiles</a><a class="headerlink" href="#module-UioFiles" title="Permalink to this headline">¶</a></h3>
-<dl class="class">
-<dt id="UioFiles.UioFiles">
-<em class="property">class </em><code class="descclassname">UioFiles.</code><code class="descname">UioFiles</code><span class="sig-paren">(</span><em>path</em>, <em>pattern</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/UioFiles.html#UioFiles"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#UioFiles.UioFiles" title="Permalink to this definition">¶</a></dt>
-<dd><p>Collection of files matching a specific pattern.</p>
-<p>The pattern can contain regular expressions for the files.
-The files are listed and can be transformed to a single string or
-they can be deleted.</p>
-<dl class="attribute">
-<dt id="UioFiles.UioFiles.path">
-<code class="descname">path</code><a class="headerlink" href="#UioFiles.UioFiles.path" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Directory where to list the files.</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="UioFiles.UioFiles.pattern">
-<code class="descname">pattern</code><a class="headerlink" href="#UioFiles.UioFiles.pattern" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>str</em> – Regular expression pattern. For example: ‘*.grb’</p>
-</dd></dl>
-
-<dl class="attribute">
-<dt id="UioFiles.UioFiles.files">
-<code class="descname">files</code><a class="headerlink" href="#UioFiles.UioFiles.files" title="Permalink to this definition">¶</a></dt>
-<dd><p><em>list of str</em> – List of files matching the pattern in the path.</p>
-</dd></dl>
-
-<dl class="method">
-<dt id="UioFiles.UioFiles.delete_files">
-<code class="descname">delete_files</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/UioFiles.html#UioFiles.delete_files"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#UioFiles.UioFiles.delete_files" title="Permalink to this definition">¶</a></dt>
-<dd><p>Deletes the files.</p>
-</dd></dl>
-
-</dd></dl>
-
-</div>
-</div>
-<div class="section" id="modules">
-<h2><a class="toc-backref" href="#id10">Modules</a><a class="headerlink" href="#modules" title="Permalink to this headline">¶</a></h2>
-<div class="section" id="module-get_mars_data">
-<span id="get-mars-data"></span><h3><a class="toc-backref" href="#id11">get_mars_data</a><a class="headerlink" href="#module-get_mars_data" title="Permalink to this headline">¶</a></h3>
-<p>This script extracts MARS data from ECMWF servers.</p>
-<p>At first, the necessary parameters from command line and CONTROL files are
-extracted. They define the data set to be extracted from MARS.</p>
-<p>This file can also be imported as a module and contains the following
-functions:</p>
-<blockquote>
-<div><ul class="simple">
-<li>main - the main function of the script</li>
-<li>get_mars_data - overall control of ECMWF data retrievment</li>
-<li>write_reqheader - writes the header into the mars_request file</li>
-<li>mk_server - creates the server connection to ECMWF servers</li>
-<li>mk_dates - defines the start and end date</li>
-<li>remove_old - deletes old retrieved grib files</li>
-<li>do_retrievement - creates individual retrievals</li>
-</ul>
-</div></blockquote>
-<p>Type: get_mars_data.py –help
-to get information about command line parameters.
-Read the documentation for usage instructions.</p>
-<dl class="function">
-<dt id="get_mars_data.check_dates_for_nonflux_fc_times">
-<code class="descclassname">get_mars_data.</code><code class="descname">check_dates_for_nonflux_fc_times</code><span class="sig-paren">(</span><em>types</em>, <em>times</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#check_dates_for_nonflux_fc_times"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.check_dates_for_nonflux_fc_times" title="Permalink to this definition">¶</a></dt>
-<dd></dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.do_retrievement">
-<code class="descclassname">get_mars_data.</code><code class="descname">do_retrievement</code><span class="sig-paren">(</span><em>c</em>, <em>server</em>, <em>start</em>, <em>end</em>, <em>delta_t</em>, <em>fluxes=False</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#do_retrievement"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.do_retrievement" title="Permalink to this definition">¶</a></dt>
-<dd><p>Divides the complete retrieval period in smaller chunks and
-retrieves the data from MARS.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-<li><strong>server</strong> (<em>ECMWFService</em><em> or </em><em>ECMWFDataServer</em>) – The server connection to ECMWF.</li>
-<li><strong>start</strong> (<em>datetime</em>) – The start date of the retrieval.</li>
-<li><strong>end</strong> (<em>datetime</em>) – The end date of the retrieval.</li>
-<li><strong>delta_t</strong> (<em>datetime</em>) – Delta_t + 1 is the maximal time period of a single
-retrieval.</li>
-<li><strong>fluxes</strong> (<em>boolean</em><em>, </em><em>optional</em>) – Decides if the flux parameters are to be retrieved or
-the rest of the parameter list.
-Default value is False.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.get_mars_data">
-<code class="descclassname">get_mars_data.</code><code class="descname">get_mars_data</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#get_mars_data"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.get_mars_data" title="Permalink to this definition">¶</a></dt>
-<dd><p>Retrieves the EC data needed for a FLEXPART simulation.</p>
-<p>Start and end dates for retrieval period is set. Retrievals
-are divided into smaller periods if necessary and datechunk parameter
-is set.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.main">
-<code class="descclassname">get_mars_data.</code><code class="descname">main</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#main"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.main" title="Permalink to this definition">¶</a></dt>
-<dd><p>Controls the program to get data out of mars.</p>
-<p>This is done if it is called directly from command line.
-Then it also takes program call arguments and control file input.</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.mk_dates">
-<code class="descclassname">get_mars_data.</code><code class="descname">mk_dates</code><span class="sig-paren">(</span><em>c</em>, <em>fluxes</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#mk_dates"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.mk_dates" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prepares start and end date depending on flux or non flux data.</p>
-<p>If forecast for maximum one day (upto 24h) are to be retrieved, then
-collect accumulation data (flux data) with additional days in the
-beginning and at the end (used for complete disaggregation of
-original period)</p>
-<p>If forecast data longer than 24h are to be retrieved, then
-collect accumulation data (flux data) with the exact start and end date
-(disaggregation will be done for the exact time period with
-boundary conditions)</p>
-<p>Since for basetime the extraction contains the 12 hours upfront,
-if basetime is 0, the starting date has to be the day before and</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-<li><strong>fluxes</strong> (<em>boolean</em><em>, </em><em>optional</em>) – Decides if the flux parameter settings are stored or
-the rest of the parameter list.
-Default value is False.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first last"><ul class="simple">
-<li><strong>start</strong> (<em>datetime</em>) – The start date of the retrieving data set.</li>
-<li><strong>end</strong> (<em>datetime</em>) – The end date of the retrieving data set.</li>
-<li><strong>chunk</strong> (<em>datetime</em>) – Time period in days for one single mars retrieval.</li>
-</ul>
-</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.mk_server">
-<code class="descclassname">get_mars_data.</code><code class="descname">mk_server</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#mk_server"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.mk_server" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates a server connection with available python API.</p>
-<p>Which API is used depends on availability and the dataset to be retrieved.
-The CDS API is used for ERA5 dataset no matter if the user is a member or
-a public user. ECMWF WebAPI is used for all other available datasets.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>server</strong> – Connection to ECMWF server via python interface ECMWF WebAPI or CDS API.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">ECMWFDataServer, ECMWFService or Client</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.remove_old">
-<code class="descclassname">get_mars_data.</code><code class="descname">remove_old</code><span class="sig-paren">(</span><em>pattern</em>, <em>inputdir</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#remove_old"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.remove_old" title="Permalink to this definition">¶</a></dt>
-<dd><p>Deletes old retrieval files from current input directory
-matching the pattern.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>pattern</strong> (<em>str</em>) – The sub string pattern which identifies the files to be deleted.</li>
-<li><strong>inputdir</strong> (<em>str</em><em>, </em><em>optional</em>) – Path to the directory where the retrieved data is stored.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="get_mars_data.write_reqheader">
-<code class="descclassname">get_mars_data.</code><code class="descname">write_reqheader</code><span class="sig-paren">(</span><em>marsfile</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/get_mars_data.html#write_reqheader"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#get_mars_data.write_reqheader" title="Permalink to this definition">¶</a></dt>
-<dd><p>Writes header with column names into mars request file.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>marsfile</strong> (<em>str</em>) – Path to the mars request file.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</div>
-<div class="section" id="module-prepare_flexpart">
-<span id="prepare-flexpart"></span><h3><a class="toc-backref" href="#id12">prepare_flexpart</a><a class="headerlink" href="#module-prepare_flexpart" title="Permalink to this headline">¶</a></h3>
-<p>This script prepares the final version of the grib files which are
-then used by FLEXPART.</p>
-<p>It converts the bunch of grib files extracted via get_mars_data before,
-by doing the necessary conversion to get consistent grids or the
-disaggregation of flux data. Finally, the data fields are combined
-in files per available hour with the naming convention xxYYMMDDHH,
-where xx should be 2 arbitrary letters (mostly xx is chosen to be “EN”).</p>
-<p>This file can also be imported as a module which then contains the following
-functions:</p>
-<blockquote>
-<div><ul class="simple">
-<li>main</li>
-<li>prepare_flexpart</li>
-</ul>
-</div></blockquote>
-<p>Type: prepare_flexpart.py –help
-to get information about command line parameters.
-Read the documentation for usage instructions.</p>
-<dl class="function">
-<dt id="prepare_flexpart.main">
-<code class="descclassname">prepare_flexpart.</code><code class="descname">main</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/prepare_flexpart.html#main"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#prepare_flexpart.main" title="Permalink to this definition">¶</a></dt>
-<dd><p>Controls the program to prepare flexpart input files from mars data.</p>
-<p>This is done if it is called directly from command line.
-Then it also takes program call arguments and control file input.</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="prepare_flexpart.prepare_flexpart">
-<code class="descclassname">prepare_flexpart.</code><code class="descname">prepare_flexpart</code><span class="sig-paren">(</span><em>ppid</em>, <em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/prepare_flexpart.html#prepare_flexpart"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#prepare_flexpart.prepare_flexpart" title="Permalink to this definition">¶</a></dt>
-<dd><p>Converts the mars data into flexpart ready input files.</p>
-<p>Specific data fields are converted to a different grid and the flux
-data are going to be disaggregated. The data fields are collected by
-hour and stored in a file with a specific FLEXPART relevant naming
-convention.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>ppid</strong> (<em>int</em>) – Contains the ppid number of the current ECMWF job. It will be None if
-the method was called within this module.</li>
-<li><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</div>
-<div class="section" id="module-tools">
-<span id="tools"></span><h3><a class="toc-backref" href="#id13">tools</a><a class="headerlink" href="#module-tools" title="Permalink to this headline">¶</a></h3>
-<p>This module contains a collection of diverse tasks within flex_extract.</p>
-<dl class="function">
-<dt id="tools.clean_up">
-<code class="descclassname">tools.</code><code class="descname">clean_up</code><span class="sig-paren">(</span><em>c</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#clean_up"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.clean_up" title="Permalink to this definition">¶</a></dt>
-<dd><p>Remove files from the intermediate directory (inputdir).</p>
-<p>It keeps the final FLEXPART input files if program runs without
-ECMWF Api and keywords “ectrans” or “ecstorage” are set to “1”.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>c</strong> (<a class="reference internal" href="#ControlFile.ControlFile" title="ControlFile.ControlFile"><em>ControlFile</em></a>) – Contains all the parameters of CONTROL file and
-command line.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.execute_subprocess">
-<code class="descclassname">tools.</code><code class="descname">execute_subprocess</code><span class="sig-paren">(</span><em>cmd_list</em>, <em>error_msg='SUBPROCESS FAILED!'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#execute_subprocess"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.execute_subprocess" title="Permalink to this definition">¶</a></dt>
-<dd><p>Executes a command line instruction via a subprocess.</p>
-<p>Error handling is done if an error occures.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>cmd_list</strong> (<em>list of str</em>) – A list of the components for the command line execution. Each
-list entry is a single part of the command which is seperated from
-the rest by a blank space.
-E.g. [‘mv’, file1, file2]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>error_msg</strong> – The possible error message if the subprocess failed.
-By default it will just tell “SUBPROCESS FAILED!”.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">str, optional</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.get_cmdline_args">
-<code class="descclassname">tools.</code><code class="descname">get_cmdline_args</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#get_cmdline_args"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.get_cmdline_args" title="Permalink to this definition">¶</a></dt>
-<dd><p>Decomposes the command line arguments and assigns them to variables.
-Apply default values for non mentioned arguments.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body"><strong>args</strong> – Contains the commandline arguments from script/program call.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Return type:</th><td class="field-body">Namespace</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.get_dimensions">
-<code class="descclassname">tools.</code><code class="descname">get_dimensions</code><span class="sig-paren">(</span><em>info</em>, <em>purefc</em>, <em>dtime</em>, <em>index_vals</em>, <em>start_date</em>, <em>end_date</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#get_dimensions"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.get_dimensions" title="Permalink to this definition">¶</a></dt>
-<dd><p>This function specifies the correct dimensions for x, y and t.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>info</strong> (<em>dict</em>) – Contains basic informations of the ECMWF grib files, e.g.
-‘Ni’, ‘Nj’, ‘latitudeOfFirstGridPointInDegrees’,
-‘longitudeOfFirstGridPointInDegrees’, ‘latitudeOfLastGridPointInDegrees’,
-‘longitudeOfLastGridPointInDegrees’, ‘jDirectionIncrementInDegrees’,
-‘iDirectionIncrementInDegrees’, ‘missingValue’</li>
-<li><strong>purefc</strong> (<em>int</em>) – Switch for definition of pure forecast mode or not.</li>
-<li><strong>dtime</strong> (<em>str</em>) – Time step in hours.</li>
-<li><strong>index_vals</strong> (<em>list of list of str</em>) – Contains the values from the keys used for a distinct selection
-of grib messages in processing the grib files.
-Content looks like e.g.:
-index_vals[0]: (‘20171106’, ‘20171107’, ‘20171108’) ; date
-index_vals[1]: (‘0’, ‘1200’, ‘1800’, ‘600’) ; time
-index_vals[2]: (‘0’, ‘12’, ‘3’, ‘6’, ‘9’) ; stepRange</li>
-<li><strong>start_date</strong> (<em>str</em>) – The start date of the retrieval job.</li>
-<li><strong>end_date</strong> (<em>str</em>) – The end date of the retrieval job.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>(ix, jy, it)</strong> – Dimension in x-direction, y-direction and in time.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">tuple of int</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.get_informations">
-<code class="descclassname">tools.</code><code class="descname">get_informations</code><span class="sig-paren">(</span><em>filename</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#get_informations"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.get_informations" title="Permalink to this definition">¶</a></dt>
-<dd><p>Gets basic information from an example grib file.</p>
-<p>These information are important for later use and the
-initialization of numpy arrays for data storing.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filename</strong> (<em>str</em>) – Name of the file which will be opened to extract basic information.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>data</strong> – Contains basic informations of the ECMWF grib files, e.g.
-‘Ni’, ‘Nj’, ‘latitudeOfFirstGridPointInDegrees’,
-‘longitudeOfFirstGridPointInDegrees’, ‘latitudeOfLastGridPointInDegrees’,
-‘longitudeOfLastGridPointInDegrees’, ‘jDirectionIncrementInDegrees’,
-‘iDirectionIncrementInDegrees’, ‘missingValue’</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">dict</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.get_list_as_string">
-<code class="descclassname">tools.</code><code class="descname">get_list_as_string</code><span class="sig-paren">(</span><em>list_obj</em>, <em>concatenate_sign='</em>, <em>'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#get_list_as_string"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.get_list_as_string" title="Permalink to this definition">¶</a></dt>
-<dd><p>Converts a list of arbitrary content into a single string.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>list_obj</strong> (<em>list of *</em>) – A list with arbitrary content.</li>
-<li><strong>concatenate_sign</strong> (<em>str</em><em>, </em><em>optional</em>) – A string which is used to concatenate the single
-list elements. Default value is “, “.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>str_of_list</strong> – The content of the list as a single string.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">str</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.init128">
-<code class="descclassname">tools.</code><code class="descname">init128</code><span class="sig-paren">(</span><em>filepath</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#init128"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.init128" title="Permalink to this definition">¶</a></dt>
-<dd><p>Opens and reads the grib file with table 128 information.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filepath</strong> (<em>str</em>) – Path to file of ECMWF grib table number 128.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>table128</strong> – Contains the ECMWF grib table 128 information.
-The key is the parameter number and the value is the
-short name of the parameter.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">dict</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.make_dir">
-<code class="descclassname">tools.</code><code class="descname">make_dir</code><span class="sig-paren">(</span><em>directory</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#make_dir"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.make_dir" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates a directory.</p>
-<p>It gives a warning if the directory already exists and skips process.
-The program stops only if there is another problem.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>directory</strong> (<em>str</em>) – The path to directory which should be created.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.my_error">
-<code class="descclassname">tools.</code><code class="descname">my_error</code><span class="sig-paren">(</span><em>message='ERROR'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#my_error"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.my_error" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prints a specified error message which can be passed to the function
-before exiting the program.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>message</strong> (<em>str</em><em>, </em><em>optional</em>) – Error message. Default value is “ERROR”.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.none_or_int">
-<code class="descclassname">tools.</code><code class="descname">none_or_int</code><span class="sig-paren">(</span><em>value</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#none_or_int"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.none_or_int" title="Permalink to this definition">¶</a></dt>
-<dd><p>Converts the input string into pythons None-type if the string
-contains string “None”. Otherwise it is converted to an integer value.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>value</strong> (<em>str</em>) – String to be checked for the “None” word.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Return depends on the content of the input value. If it was “None”,
-then the python type None is returned. Otherwise the string is
-converted into an integer value.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">None or int(value)</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.none_or_str">
-<code class="descclassname">tools.</code><code class="descname">none_or_str</code><span class="sig-paren">(</span><em>value</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#none_or_str"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.none_or_str" title="Permalink to this definition">¶</a></dt>
-<dd><p>Converts the input string into pythons None-type if the string
-contains string “None”.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>value</strong> (<em>str</em>) – String to be checked for the “None” word.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body">Return depends on the content of the input value. If it was “None”,
-then the python type None is returned. Otherwise the string itself.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">None or value</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.normal_exit">
-<code class="descclassname">tools.</code><code class="descname">normal_exit</code><span class="sig-paren">(</span><em>message='Done!'</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#normal_exit"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.normal_exit" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prints a specific exit message which can be passed to the function.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>message</strong> (<em>str</em><em>, </em><em>optional</em>) – Message for exiting program. Default value is “Done!”.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.product">
-<code class="descclassname">tools.</code><code class="descname">product</code><span class="sig-paren">(</span><em>*args</em>, <em>**kwds</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#product"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.product" title="Permalink to this definition">¶</a></dt>
-<dd><p>Creates combinations of all passed arguments.</p>
-<p>This method combines the single characters of the passed arguments
-with each other. So that each character of each argument value
-will be combined with each character of the other arguments as a tuple.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p class="last">This method is taken from an example at the ECMWF wiki website.
-<a class="reference external" href="https://software.ecmwf.int/wiki/display/GRIB/index.py">https://software.ecmwf.int/wiki/display/GRIB/index.py</a>; 2018-03-16</p>
-</div>
-<p class="rubric">Example</p>
-<p>product(‘ABCD’, ‘xy’) –> Ax Ay Bx By Cx Cy Dx Dy</p>
-<p>product(range(2), repeat = 3) –> 000 001 010 011 100 101 110 111</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>*args</strong> (<em>list</em><em> or </em><em>str</em>) – Positional arguments (arbitrary number).</li>
-<li><strong>**kwds</strong> (<em>dict</em>) – Contains all the keyword arguments from *args.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>prod</strong> – Return will be done with “yield”. A tuple of combined arguments.
-See example in description above.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last"><code class="xref py py-obj docutils literal notranslate"><span class="pre">tuple</span></code></p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.put_file_to_ecserver">
-<code class="descclassname">tools.</code><code class="descname">put_file_to_ecserver</code><span class="sig-paren">(</span><em>ecd</em>, <em>filename</em>, <em>target</em>, <em>ecuid</em>, <em>ecgid</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#put_file_to_ecserver"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.put_file_to_ecserver" title="Permalink to this definition">¶</a></dt>
-<dd><p>Uses the ecaccess-file-put command to send a file to the ECMWF servers.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p class="last">The return value is just for testing reasons. It does not have
-to be used from the calling function since the whole error handling
-is done in here.</p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>ecd</strong> (<em>str</em>) – The path were the file is stored.</li>
-<li><strong>filename</strong> (<em>str</em>) – The name of the file to send to the ECMWF server.</li>
-<li><strong>target</strong> (<em>str</em>) – The target queue where the file should be sent to.</li>
-<li><strong>ecuid</strong> (<em>str</em>) – The user id on ECMWF server.</li>
-<li><strong>ecgid</strong> (<em>str</em>) – The group id on ECMWF server.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.read_ecenv">
-<code class="descclassname">tools.</code><code class="descname">read_ecenv</code><span class="sig-paren">(</span><em>filepath</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#read_ecenv"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.read_ecenv" title="Permalink to this definition">¶</a></dt>
-<dd><p>Reads the file into a dictionary where the key values are the parameter
-names.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filepath</strong> (<em>str</em>) – Path to file where the ECMWF environment parameters are stored.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>envs</strong> – Contains the environment parameter ecuid, ecgid, gateway
-and destination for ECMWF server environments.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">dict</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.send_mail">
-<code class="descclassname">tools.</code><code class="descname">send_mail</code><span class="sig-paren">(</span><em>users</em>, <em>success_mode</em>, <em>message</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#send_mail"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.send_mail" title="Permalink to this definition">¶</a></dt>
-<dd><p>Prints a specific exit message which can be passed to the function.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first last simple">
-<li><strong>users</strong> (<em>list of str</em>) – Contains all email addresses which should be notified.
-It might also contain just the ecmwf user name which wil trigger
-mailing to the associated email address for this user.</li>
-<li><strong>success_mode</strong> (<em>str</em>) – States the exit mode of the program to put into
-the mail subject line.</li>
-<li><strong>message</strong> (<em>str</em><em>, </em><em>optional</em>) – Message for exiting program. Default value is “Done!”.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.setup_controldata">
-<code class="descclassname">tools.</code><code class="descname">setup_controldata</code><span class="sig-paren">(</span><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#setup_controldata"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.setup_controldata" title="Permalink to this definition">¶</a></dt>
-<dd><p>Collects, stores and checks controlling arguments from command line,
-CONTROL file and ECMWF_ENV file.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Returns:</th><td class="field-body"><ul class="simple">
-<li><strong>c</strong> (<em>ControlFile</em>) – Contains all the parameters of CONTROL file and
-command line.</li>
-<li><strong>ppid</strong> (<em>str</em>) – Parent process id.</li>
-<li><strong>queue</strong> (<em>str</em>) – Name of queue for submission to ECMWF (e.g. ecgate or cca )</li>
-<li><strong>job_template</strong> (<em>str</em>) – Name of the job template file for submission to ECMWF server.</li>
-</ul>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.silent_remove">
-<code class="descclassname">tools.</code><code class="descname">silent_remove</code><span class="sig-paren">(</span><em>filename</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#silent_remove"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.silent_remove" title="Permalink to this definition">¶</a></dt>
-<dd><p>Remove file if it exists.
-The function does not fail if the file does not exist.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>filename</strong> (<em>str</em>) – The name of the file to be removed without notification.</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.submit_job_to_ecserver">
-<code class="descclassname">tools.</code><code class="descname">submit_job_to_ecserver</code><span class="sig-paren">(</span><em>target</em>, <em>jobname</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#submit_job_to_ecserver"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.submit_job_to_ecserver" title="Permalink to this definition">¶</a></dt>
-<dd><p>Uses ecaccess-job-submit command to submit a job to the ECMWF server.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p class="last">The return value is just for testing reasons. It does not have
-to be used from the calling function since the whole error handling
-is done in here.</p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>target</strong> (<em>str</em>) – The target where the file should be sent to, e.g. the queue.</li>
-<li><strong>jobname</strong> (<em>str</em>) – The name of the jobfile to be submitted to the ECMWF server.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>job_id</strong> – The id number of the job as a reference at the ecmwf server.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">int</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.to_param_id">
-<code class="descclassname">tools.</code><code class="descname">to_param_id</code><span class="sig-paren">(</span><em>pars</em>, <em>table</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#to_param_id"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.to_param_id" title="Permalink to this definition">¶</a></dt>
-<dd><p>Transform parameter names to parameter ids with ECMWF grib table 128.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>pars</strong> (<em>str</em>) – Addpar argument from CONTROL file in the format of
-parameter names instead of ids. The parameter short
-names are sepearted with “/” and they are passed as
-one single string.</li>
-<li><strong>table</strong> (<em>dict</em>) – Contains the ECMWF grib table 128 information.
-The key is the parameter number and the value is the
-short name of the parameter.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>ipar</strong> – List of addpar parameters from CONTROL file transformed to
-parameter ids in the format of integer.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">list of int</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-<dl class="function">
-<dt id="tools.to_param_id_with_tablenumber">
-<code class="descclassname">tools.</code><code class="descname">to_param_id_with_tablenumber</code><span class="sig-paren">(</span><em>pars</em>, <em>table</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/tools.html#to_param_id_with_tablenumber"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#tools.to_param_id_with_tablenumber" title="Permalink to this definition">¶</a></dt>
-<dd><p>Transform parameter names to parameter ids and add table id.</p>
-<p>Conversion with ECMWF grib table 128.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
-<li><strong>pars</strong> (<em>str</em>) – Addpar argument from CONTROL file in the format of
-parameter names instead of ids. The parameter short
-names are sepearted with “/” and they are passed as
-one single string.</li>
-<li><strong>table</strong> (<em>dict</em>) – Contains the ECMWF grib table 128 information.
-The key is the parameter number and the value is the
-short name of the parameter.</li>
-</ul>
-</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"><strong>spar</strong> – List of addpar parameters from CONTROL file transformed to
-parameter ids in the format of integer.</p>
-</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">str</p>
-</td>
-</tr>
-</tbody>
-</table>
-</dd></dl>
-
-</div>
-<div class="section" id="module-disaggregation">
-<span id="disaggregation"></span><h3><a class="toc-backref" href="#id14">disaggregation</a><a class="headerlink" href="#module-disaggregation" title="Permalink to this headline">¶</a></h3>
-<p>Disaggregation of deaccumulated flux data from an ECMWF model FG field.</p>
-<dl class="docutils">
-<dt>Initially the flux data to be concerned are:</dt>
-<dd><ul class="first last simple">
-<li>large-scale precipitation</li>
-<li>convective precipitation</li>
-<li>surface sensible heat flux</li>
-<li>surface solar radiation</li>
-<li>u stress</li>
-<li>v stress</li>
-</ul>
-</dd>
-</dl>
-<p>Different versions of disaggregation is provided for rainfall
-data (darain, modified linear) and the surface fluxes and
-stress data (dapoly, cubic polynomial).</p>
-<dl class="function">
-<dt id="disaggregation.IA3">
-<code class="descclassname">disaggregation.</code><code class="descname">IA3</code><span class="sig-paren">(</span><em>g</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#IA3"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.IA3" title="Permalink to this definition">¶</a></dt>
-<dd><p>Interpolation with a non-negative geometric mean based algorithm.</p>
-<p>The original grid is reconstructed by adding two sampling points in each
-data series interval. This subgrid is used to keep all information during
-the interpolation within the associated interval. Additionally, an advanced
-monotonicity filter is applied to improve the monotonicity properties of
-the series.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p>(C) Copyright 2017-2019
-Sabine Hittmeir, Anne Philipp, Petra Seibert</p>
-<p class="last">This work is licensed under the Creative Commons Attribution 4.0
-International License. To view a copy of this license, visit
-<a class="reference external" href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</a> or send a letter to
-Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>g</strong> (<em>list of float</em>) – Complete data series that will be interpolated having
-the dimension of the original raw series.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>f</strong> – The interpolated data series with additional subgrid points.
-Its dimension is equal to the length of the input data series
-times three.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">list of float</td>
-</tr>
-</tbody>
-</table>
-<p class="rubric">References</p>
-<p>For more information see article:
-Hittmeir, S.; Philipp, A.; Seibert, P. (2017): A conservative
-interpolation scheme for extensive quantities with application to the
-Lagrangian particle dispersion model FLEXPART.,
-Geoscientific Model Development</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.dapoly">
-<code class="descclassname">disaggregation.</code><code class="descname">dapoly</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#dapoly"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.dapoly" title="Permalink to this definition">¶</a></dt>
-<dd><p>Cubic polynomial interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG field
-using a cubic polynomial solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which
-generates a new, disaggregated value which is output at the
-central point of the 4 accumulation timespans.
-This new point is used for linear interpolation of the complete
-timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<em>list of array of float</em>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">array of float</td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.darain">
-<code class="descclassname">disaggregation.</code><code class="descname">darain</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#darain"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.darain" title="Permalink to this definition">¶</a></dt>
-<dd><p>Linear interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG rainfall
-field using a modified linear solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which generates
-a new, disaggregated value which is output at the central point
-of the 4 accumulation timespans. This new point is used for linear
-interpolation of the complete timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<em>list of array of float</em>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body">array of float</td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
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-
- <div class="section" id="module-disaggregation">
-<span id="auto-generated-documentation"></span><h1>Auto Generated Documentation<a class="headerlink" href="#module-disaggregation" title="Permalink to this headline">¶</a></h1>
-<dl class="function">
-<dt id="disaggregation.IA3">
-<code class="descclassname">disaggregation.</code><code class="descname">IA3</code><span class="sig-paren">(</span><em>g</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#IA3"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.IA3" title="Permalink to this definition">¶</a></dt>
-<dd><p>Interpolation with a non-negative geometric mean based algorithm.</p>
-<p>The original grid is reconstructed by adding two sampling points in each
-data series interval. This subgrid is used to keep all information during
-the interpolation within the associated interval. Additionally, an advanced
-monotonicity filter is applied to improve the monotonicity properties of
-the series.</p>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<p>Copyright 2017
-Sabine Hittmeir, Anne Philipp, Petra Seibert</p>
-<p class="last">This work is licensed under the Creative Commons Attribution 4.0
-International License. To view a copy of this license, visit
-<a class="reference external" href="http://creativecommons.org/licenses/by/4.0/">http://creativecommons.org/licenses/by/4.0/</a> or send a letter to
-Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.</p>
-</div>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>g</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – Complete data series that will be interpolated having
-the dimension of the original raw series.</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>f</strong> – The interpolated data series with additional subgrid points.
-Its dimension is equal to the length of the input data series
-times three.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<p class="rubric">References</p>
-<p>For more information see article:
-Hittmeir, S.; Philipp, A.; Seibert, P. (2017): A conservative
-interpolation scheme for extensive quantities with application to the
-Lagrangian particle dispersion model FLEXPART.,
-Geoscientific Model Development</p>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.dapoly">
-<code class="descclassname">disaggregation.</code><code class="descname">dapoly</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#dapoly"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.dapoly" title="Permalink to this definition">¶</a></dt>
-<dd><p>Cubic polynomial interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG field
-using a cubic polynomial solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which
-generates a new, disaggregated value which is output at the
-central point of the 4 accumulation timespans.
-This new point is used for linear interpolation of the complete
-timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
-<dl class="function">
-<dt id="disaggregation.darain">
-<code class="descclassname">disaggregation.</code><code class="descname">darain</code><span class="sig-paren">(</span><em>alist</em><span class="sig-paren">)</span><a class="reference internal" href="_modules/disaggregation.html#darain"><span class="viewcode-link">[source]</span></a><a class="headerlink" href="#disaggregation.darain" title="Permalink to this definition">¶</a></dt>
-<dd><p>Linear interpolation of deaccumulated fluxes.</p>
-<p>Interpolation of deaccumulated fluxes of an ECMWF model FG rainfall
-field using a modified linear solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which generates
-a new, disaggregated value which is output at the central point
-of the 4 accumulation timespans. This new point is used for linear
-interpolation of the complete timeseries afterwards.</p>
-<table class="docutils field-list" frame="void" rules="none">
-<col class="field-name" />
-<col class="field-body" />
-<tbody valign="top">
-<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><strong>alist</strong> (<code class="xref py py-obj docutils literal notranslate"><span class="pre">list</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code>) – List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. [[array_t1], [array_t2], [array_t3], [array_t4]]</td>
-</tr>
-<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><strong>nfield</strong> – Interpolated flux at central point of accumulation timespan.</td>
-</tr>
-<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><code class="xref py py-obj docutils literal notranslate"><span class="pre">array</span></code> of <code class="xref py py-obj docutils literal notranslate"><span class="pre">float</span></code></td>
-</tr>
-</tbody>
-</table>
-<div class="admonition note">
-<p class="first admonition-title">Note</p>
-<dl class="last docutils">
-<dt>March 2000 <span class="classifier-delimiter">:</span> <span class="classifier">P. JAMES</span></dt>
-<dd>Original author</dd>
-<dt>June 2003 <span class="classifier-delimiter">:</span> <span class="classifier">A. BECK</span></dt>
-<dd>Adaptations</dd>
-<dt>November 2015 <span class="classifier-delimiter">:</span> <span class="classifier">Leopold Haimberger (University of Vienna)</span></dt>
-<dd>Migration from Fortran to Python</dd>
-</dl>
-</div>
-</dd></dl>
-
-</div>
-
-
- </div>
- </div>
- </div>
- <div class="clearer"></div>
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index 2cbcfda7fa3a6a22d968d9548ca3188dda65375e..0000000000000000000000000000000000000000
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-
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-<!DOCTYPE html>
-<!--[if IE 8]><html class="no-js lt-ie9" lang="en" > <![endif]-->
-<!--[if gt IE 8]><!--> <html class="no-js" lang="en" > <!--<![endif]-->
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- <title>Index — flex_extract 7.1 alpha documentation</title>
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-<li class="toctree-l1"><a class="reference internal" href="installation.html">Installation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="program_structure.html">Program Structure</a></li>
-<li class="toctree-l1"><a class="reference internal" href="user_guide.html">User Guide</a></li>
-<li class="toctree-l1"><a class="reference internal" href="api.html">Auto Generated Documentation</a></li>
-<li class="toctree-l1"><a class="reference internal" href="support.html">Support</a></li>
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-</div>
- <div role="main" class="document" itemscope="itemscope" itemtype="http://schema.org/Article">
- <div itemprop="articleBody">
-
-
-<h1 id="index">Index</h1>
-
-<div class="genindex-jumpbox">
- <a href="#A"><strong>A</strong></a>
- | <a href="#B"><strong>B</strong></a>
- | <a href="#C"><strong>C</strong></a>
- | <a href="#D"><strong>D</strong></a>
- | <a href="#E"><strong>E</strong></a>
- | <a href="#F"><strong>F</strong></a>
- | <a href="#G"><strong>G</strong></a>
- | <a href="#I"><strong>I</strong></a>
- | <a href="#L"><strong>L</strong></a>
- | <a href="#M"><strong>M</strong></a>
- | <a href="#N"><strong>N</strong></a>
- | <a href="#O"><strong>O</strong></a>
- | <a href="#P"><strong>P</strong></a>
- | <a href="#R"><strong>R</strong></a>
- | <a href="#S"><strong>S</strong></a>
- | <a href="#T"><strong>T</strong></a>
- | <a href="#U"><strong>U</strong></a>
- | <a href="#W"><strong>W</strong></a>
-
-</div>
-<h2 id="A">A</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.accmaxstep">accmaxstep (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.accmaxstep">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.acctime">acctime (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.acctime">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.acctype">acctype (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.acctype">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.accuracy">accuracy (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.accuracy">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.accuracy">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.addpar">addpar (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.addpar">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.area">area (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.area">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.area">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.assign_args_to_control">assign_args_to_control() (ControlFile.ControlFile method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.assign_envs_to_control">assign_envs_to_control() (ControlFile.ControlFile method)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="B">B</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.basetime">basetime (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.basetime">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- </ul></td>
-</tr></table>
-
-<h2 id="C">C</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.calc_extra_elda">calc_extra_elda() (EcFlexpart.EcFlexpart method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.cds_api">cds_api (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.check_conditions">check_conditions() (ControlFile.ControlFile method)</a>
-</li>
- <li><a href="api.html#get_mars_data.check_dates_for_nonflux_fc_times">check_dates_for_nonflux_fc_times() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#install.check_install_conditions">check_install_conditions() (in module install)</a>
-</li>
- <li><a href="api.html#tools.clean_up">clean_up() (in module tools)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile">ControlFile (class in ControlFile)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.controlfile">controlfile (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#module-ControlFile">ControlFile (module)</a>
-</li>
- <li><a href="api.html#GribUtil.GribUtil.copy_dummy_msg">copy_dummy_msg() (GribUtil.GribUtil method)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.create">create() (EcFlexpart.EcFlexpart method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.cwc">cwc (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="D">D</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#disaggregation.dapoly">dapoly() (in module disaggregation)</a>
-</li>
- <li><a href="api.html#disaggregation.darain">darain() (in module disaggregation)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.data_retrieve">data_retrieve() (MarsRetrieval.MarsRetrieval method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.dataset">dataset (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.dataset">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.dataset">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.date">date (MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.date_chunk">date_chunk (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.dates">dates (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.deacc_fluxes">deacc_fluxes() (EcFlexpart.EcFlexpart method)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.debug">debug (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#install.del_convert_build">del_convert_build() (in module install)</a>
-</li>
- <li><a href="api.html#UioFiles.UioFiles.delete_files">delete_files() (UioFiles.UioFiles method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.destination">destination (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#module-disaggregation">disaggregation (module)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.display_info">display_info() (MarsRetrieval.MarsRetrieval method)</a>
-</li>
- <li><a href="api.html#get_mars_data.do_retrievement">do_retrievement() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.dpdeta">dpdeta (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.dtime">dtime (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.dtime">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- </ul></td>
-</tr></table>
-
-<h2 id="E">E</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.ec_api">ec_api (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart">EcFlexpart (class in EcFlexpart)</a>
-
- <ul>
- <li><a href="api.html#module-EcFlexpart">(module)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.ecfsdir">ecfsdir (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.ecgid">ecgid (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.ecstorage">ecstorage (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.ectrans">ectrans (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.ecuid">ecuid (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.end_date">end_date (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.eta">eta (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.etadiff">etadiff (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.etapar">etapar (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#tools.execute_subprocess">execute_subprocess() (in module tools)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.exedir">exedir (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.expver">expver (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.expver">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.expver">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
-</tr></table>
-
-<h2 id="F">F</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#UioFiles.UioFiles.files">files (UioFiles.UioFiles attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.flexextractdir">flexextractdir (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.flexpartdir">flexpartdir (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.format">format (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="G">G</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.gateway">gateway (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.gauss">gauss (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.gaussian">gaussian (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.gaussian">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.gaussian">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#tools.get_cmdline_args">get_cmdline_args() (in module tools)</a>
-</li>
- <li><a href="api.html#tools.get_dimensions">get_dimensions() (in module tools)</a>
-</li>
- <li><a href="api.html#tools.get_informations">get_informations() (in module tools)</a>
-</li>
- <li><a href="api.html#install.get_install_cmdline_args">get_install_cmdline_args() (in module install)</a>
-</li>
- <li><a href="api.html#GribUtil.GribUtil.get_keys">get_keys() (GribUtil.GribUtil method)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#tools.get_list_as_string">get_list_as_string() (in module tools)</a>
-</li>
- <li><a href="api.html#module-get_mars_data">get_mars_data (module)</a>
-</li>
- <li><a href="api.html#get_mars_data.get_mars_data">get_mars_data() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.glevelist">glevelist (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.grib2flexpart">grib2flexpart (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#GribUtil.GribUtil">GribUtil (class in GribUtil)</a>
-
- <ul>
- <li><a href="api.html#module-GribUtil">(module)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.grid">grid (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.grid">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.grid">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
-</tr></table>
-
-<h2 id="I">I</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#disaggregation.IA3">IA3() (in module disaggregation)</a>
-</li>
- <li><a href="api.html#GribUtil.GribUtil.index">index() (GribUtil.GribUtil method)</a>
-</li>
- <li><a href="api.html#tools.init128">init128() (in module tools)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.inputdir">inputdir (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.inputdir">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#module-install">install (module)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.install_target">install_target (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#install.install_via_gateway">install_via_gateway() (in module install)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="L">L</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.left">left (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.level">level (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.level">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.levelist">levelist (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.levelist">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.levelist">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.levtype">levtype (MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.logicals">logicals (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.lower">lower (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="M">M</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.mailfail">mailfail (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.mailops">mailops (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#get_mars_data.main">main() (in module get_mars_data)</a>
-
- <ul>
- <li><a href="api.html#install.main">(in module install)</a>
-</li>
- <li><a href="api.html#prepare_flexpart.main">(in module prepare_flexpart)</a>
-</li>
- <li><a href="api.html#submit.main">(in module submit)</a>
-</li>
- </ul></li>
- <li><a href="api.html#tools.make_dir">make_dir() (in module tools)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.makefile">makefile (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.marsclass">marsclass (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.marsclass">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.marsclass">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval">MarsRetrieval (class in MarsRetrieval)</a>
-
- <ul>
- <li><a href="api.html#module-MarsRetrieval">(module)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.maxstep">maxstep (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#install.mk_compilejob">mk_compilejob() (in module install)</a>
-</li>
- <li><a href="api.html#install.mk_convert_build">mk_convert_build() (in module install)</a>
-</li>
- <li><a href="api.html#get_mars_data.mk_dates">mk_dates() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#install.mk_env_vars">mk_env_vars() (in module install)</a>
-</li>
- <li><a href="api.html#install.mk_job_template">mk_job_template() (in module install)</a>
-</li>
- <li><a href="api.html#submit.mk_jobscript">mk_jobscript() (in module submit)</a>
-</li>
- <li><a href="api.html#get_mars_data.mk_server">mk_server() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#install.mk_tarball">mk_tarball() (in module install)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.mreq_count">mreq_count (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#tools.my_error">my_error() (in module tools)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="N">N</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#tools.none_or_int">none_or_int() (in module tools)</a>
-</li>
- <li><a href="api.html#tools.none_or_str">none_or_str() (in module tools)</a>
-</li>
- <li><a href="api.html#tools.normal_exit">normal_exit() (in module tools)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.number">number (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.number">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.number">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
-</tr></table>
-
-<h2 id="O">O</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.omega">omega (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.omegadiff">omegadiff (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.oper">oper (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.outputdir">outputdir (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.outputfilelist">outputfilelist (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="P">P</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.param">param (MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.params">params (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#UioFiles.UioFiles.path">path (UioFiles.UioFiles attribute)</a>
-</li>
- <li><a href="api.html#UioFiles.UioFiles.pattern">pattern (UioFiles.UioFiles attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.prefix">prefix (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#module-prepare_flexpart">prepare_flexpart (module)</a>
-</li>
- <li><a href="api.html#prepare_flexpart.prepare_flexpart">prepare_flexpart() (in module prepare_flexpart)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.prepare_fp_files">prepare_fp_files() (EcFlexpart.EcFlexpart method)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.print_infodata_csv">print_infodata_csv() (MarsRetrieval.MarsRetrieval method)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.process_output">process_output() (EcFlexpart.EcFlexpart method)</a>
-</li>
- <li><a href="api.html#tools.product">product() (in module tools)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.public">public (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.public">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.public">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.purefc">purefc (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.purefc">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#tools.put_file_to_ecserver">put_file_to_ecserver() (in module tools)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="R">R</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#tools.read_ecenv">read_ecenv() (in module tools)</a>
-</li>
- <li><a href="api.html#get_mars_data.remove_old">remove_old() (in module get_mars_data)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.repres">repres (MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.request">request (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.resol">resol (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.resol">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.resol">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.retrieve">retrieve() (EcFlexpart.EcFlexpart method)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.right">right (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.rrint">rrint (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="S">S</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#tools.send_mail">send_mail() (in module tools)</a>
-</li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.server">server (EcFlexpart.EcFlexpart attribute)</a>
-
- <ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.server">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#GribUtil.GribUtil.set_keys">set_keys() (GribUtil.GribUtil method)</a>
-</li>
- <li><a href="api.html#tools.setup_controldata">setup_controldata() (in module tools)</a>
-</li>
- <li><a href="api.html#tools.silent_remove">silent_remove() (in module tools)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.smooth">smooth (ControlFile.ControlFile attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.start_date">start_date (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.step">step (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.step">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.stream">stream (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.stream">(EcFlexpart.EcFlexpart attribute)</a>
-</li>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.stream">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#module-submit">submit (module)</a>
-</li>
- <li><a href="api.html#submit.submit">submit() (in module submit)</a>
-</li>
- <li><a href="api.html#tools.submit_job_to_ecserver">submit_job_to_ecserver() (in module tools)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="T">T</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.target">target (MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.time">time (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.time">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#ControlFile.ControlFile.to_list">to_list() (ControlFile.ControlFile method)</a>
-</li>
- <li><a href="api.html#tools.to_param_id">to_param_id() (in module tools)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#tools.to_param_id_with_tablenumber">to_param_id_with_tablenumber() (in module tools)</a>
-</li>
- <li><a href="api.html#module-tools">tools (module)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.type">type (ControlFile.ControlFile attribute)</a>
-
- <ul>
- <li><a href="api.html#MarsRetrieval.MarsRetrieval.type">(MarsRetrieval.MarsRetrieval attribute)</a>
-</li>
- </ul></li>
- <li><a href="api.html#EcFlexpart.EcFlexpart.types">types (EcFlexpart.EcFlexpart attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="U">U</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#UioFiles.UioFiles">UioFiles (class in UioFiles)</a>
-
- <ul>
- <li><a href="api.html#module-UioFiles">(module)</a>
-</li>
- </ul></li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#install.un_tarball">un_tarball() (in module install)</a>
-</li>
- <li><a href="api.html#ControlFile.ControlFile.upper">upper (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
-</tr></table>
-
-<h2 id="W">W</h2>
-<table style="width: 100%" class="indextable genindextable"><tr>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#ControlFile.ControlFile.wrf">wrf (ControlFile.ControlFile attribute)</a>
-</li>
- </ul></td>
- <td style="width: 33%; vertical-align: top;"><ul>
- <li><a href="api.html#EcFlexpart.EcFlexpart.write_namelist">write_namelist() (EcFlexpart.EcFlexpart method)</a>
-</li>
- <li><a href="api.html#get_mars_data.write_reqheader">write_reqheader() (in module get_mars_data)</a>
-</li>
- </ul></td>
-</tr></table>
-
-
-
- </div>
-
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- <footer>
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-<h1>Welcome to flex_extract’s user documentation!<a class="headerlink" href="#welcome-to-flex-extract-s-user-documentation" title="Permalink to this headline">¶</a></h1>
-<p>flex_extract is a software to retrieve meteorological fields from the European Centre for Medium-Range Weather Forecasts (ECMWF) Mars archive to server as input files for the FLEXTRA/FLEXPART Atmospheric Transport Modelling system.</p>
-<p>All third-party software and libraries required by flex_extract are open source and free of charge.</p>
-<table style="width:100%;">
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/download_icon.png">
- </div>
- <h2>Downloads</h2>
- <ul>
- <li><a href="">Download Tar-ball</a></li>
- <li><a href="">Git repository</a></li>
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- <img style="width:125px;vertical-align: bottom;" src="_static/prog_icon.png">
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- <h2>Program Structure</h2>
- <ul>
- <li><a href="">Overview</a></li>
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-;; - ẞ needs \DeclareUnicodeCharacter{1E9E}{\SS} (but ß needs no extra set-up).
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-;; - U+02DB (˛) and U+02D9 (˙) are also not supported by inputenc
-;; out of the box and require
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-;; - U+0127 ħ and U+0126 Ħ are absent from TeX T1+TS1 font encodings.
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-;; - Characters Ŋ and ŋ are not supported by TeX font "times" used by
-;; default by Sphinx for pdflatex engine but they are supported by
-;; some TeX fonts, in particular by the default LaTeX font for T1
-;; encoding.
-;;
-;; - " and ~ must be escaped as ~" and resp. ~~ in xindy merge rules.
-;;
-;; Contributed by the Sphinx team, July 2018.
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-(merge-rule "\IeC {\textonesuperior }" "¹" :string)
-(merge-rule "\IeC {\texttwosuperior }" "²" :string)
-(merge-rule "\IeC {\textthreesuperior }" "³" :string)
-(merge-rule "\IeC {\'a}" "á" :string)
-(merge-rule "\IeC {\'A}" "Á" :string)
-(merge-rule "\IeC {\`a}" "à" :string)
-(merge-rule "\IeC {\`A}" "À" :string)
-(merge-rule "\IeC {\^a}" "â" :string)
-(merge-rule "\IeC {\^A}" "Â" :string)
-(merge-rule "\IeC {\~"a}" "ä" :string)
-(merge-rule "\IeC {\~"A}" "Ä" :string)
-(merge-rule "\IeC {\~~a}" "ã" :string)
-(merge-rule "\IeC {\~~A}" "Ã" :string)
-(merge-rule "\IeC {\c c}" "ç" :string)
-(merge-rule "\IeC {\c C}" "Ç" :string)
-(merge-rule "\IeC {\'c}" "ć" :string)
-(merge-rule "\IeC {\'C}" "Ć" :string)
-(merge-rule "\IeC {\^c}" "ĉ" :string)
-(merge-rule "\IeC {\^C}" "Ĉ" :string)
-(merge-rule "\IeC {\.c}" "ċ" :string)
-(merge-rule "\IeC {\.C}" "Ċ" :string)
-(merge-rule "\IeC {\c s}" "ş" :string)
-(merge-rule "\IeC {\c S}" "Ş" :string)
-(merge-rule "\IeC {\c t}" "ţ" :string)
-(merge-rule "\IeC {\c T}" "Ţ" :string)
-(merge-rule "\IeC {\-}" "" :string); soft hyphen
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-(merge-rule "\IeC {\'e}" "é" :string)
-(merge-rule "\IeC {\'E}" "É" :string)
-(merge-rule "\IeC {\`e}" "è" :string)
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-(merge-rule "\IeC {\^e}" "ê" :string)
-(merge-rule "\IeC {\^E}" "Ê" :string)
-(merge-rule "\IeC {\~"e}" "ë" :string)
-(merge-rule "\IeC {\~"E}" "Ë" :string)
-(merge-rule "\IeC {\^g}" "ĝ" :string)
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-(merge-rule "\IeC {\.g}" "ġ" :string)
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-(merge-rule "\IeC {\H O}" "Ő" :string)
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-(merge-rule "\IeC {\H u}" "ű" :string)
-(merge-rule "\IeC {\H U}" "Ű" :string)
-(merge-rule "\IeC {\ae }" "æ" :string)
-(merge-rule "\IeC {\AE }" "Æ" :string)
-(merge-rule "\IeC {\textcopyright }" "©" :string)
-(merge-rule "\IeC {\c \ }" "¸" :string)
-(merge-rule "\IeC {\dh }" "ð" :string)
-(merge-rule "\IeC {\DH }" "Ð" :string)
-(merge-rule "\IeC {\dj }" "đ" :string)
-(merge-rule "\IeC {\DJ }" "Đ" :string)
-(merge-rule "\IeC {\guillemotleft }" "«" :string)
-(merge-rule "\IeC {\guillemotright }" "»" :string)
-(merge-rule "\IeC {\'\i }" "í" :string)
-(merge-rule "\IeC {\`\i }" "ì" :string)
-(merge-rule "\IeC {\^\i }" "î" :string)
-(merge-rule "\IeC {\~"\i }" "ï" :string)
-(merge-rule "\IeC {\i }" "ı" :string)
-(merge-rule "\IeC {\^\j }" "ĵ" :string)
-(merge-rule "\IeC {\k {}}" "˛" :string)
-(merge-rule "\IeC {\l }" "ł" :string)
-(merge-rule "\IeC {\L }" "Ł" :string)
-(merge-rule "\IeC {\nobreakspace }" " " :string)
-(merge-rule "\IeC {\o }" "ø" :string)
-(merge-rule "\IeC {\O }" "Ø" :string)
-(merge-rule "\IeC {\textsterling }" "£" :string)
-(merge-rule "\IeC {\textparagraph }" "¶" :string)
-(merge-rule "\IeC {\ss }" "ß" :string)
-(merge-rule "\IeC {\textsection }" "§" :string)
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-(merge-rule "\IeC {\textcent }" "¢" :string)
-(merge-rule "\IeC {\textcurrency }" "¤" :string)
-(merge-rule "\IeC {\textdegree }" "°" :string)
-(merge-rule "\IeC {\textexclamdown }" "¡" :string)
-(merge-rule "\IeC {\texthbar }" "ħ" :string)
-(merge-rule "\IeC {\textHbar }" "Ħ" :string)
-(merge-rule "\IeC {\textonehalf }" "½" :string)
-(merge-rule "\IeC {\textonequarter }" "¼" :string)
-(merge-rule "\IeC {\textordfeminine }" "ª" :string)
-(merge-rule "\IeC {\textordmasculine }" "º" :string)
-(merge-rule "\IeC {\textperiodcentered }" "·" :string)
-(merge-rule "\IeC {\textquestiondown }" "¿" :string)
-(merge-rule "\IeC {\textregistered }" "®" :string)
-(merge-rule "\IeC {\textthreequarters }" "¾" :string)
-(merge-rule "\IeC {\textyen }" "¥" :string)
-(merge-rule "\IeC {\th }" "þ" :string)
-(merge-rule "\IeC {\TH }" "Þ" :string)
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-(merge-rule "\IeC {\`I}" "Ì" :string)
-(merge-rule "\IeC {\^I}" "Î" :string)
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-(merge-rule "\IeC {\.I}" "İ" :string)
-(merge-rule "\IeC {\^J}" "Ĵ" :string)
-(merge-rule "\IeC {\k a}" "ą" :string)
-(merge-rule "\IeC {\k A}" "Ą" :string)
-(merge-rule "\IeC {\k e}" "ę" :string)
-(merge-rule "\IeC {\k E}" "Ę" :string)
-(merge-rule "\IeC {\'l}" "ĺ" :string)
-(merge-rule "\IeC {\'L}" "Ĺ" :string)
-(merge-rule "\IeC {\textlnot }" "¬" :string)
-(merge-rule "\IeC {\textmu }" "µ" :string)
-(merge-rule "\IeC {\'n}" "ń" :string)
-(merge-rule "\IeC {\'N}" "Ń" :string)
-(merge-rule "\IeC {\~~n}" "ñ" :string)
-(merge-rule "\IeC {\~~N}" "Ñ" :string)
-(merge-rule "\IeC {\'o}" "ó" :string)
-(merge-rule "\IeC {\'O}" "Ó" :string)
-(merge-rule "\IeC {\`o}" "ò" :string)
-(merge-rule "\IeC {\`O}" "Ò" :string)
-(merge-rule "\IeC {\^o}" "ô" :string)
-(merge-rule "\IeC {\^O}" "Ô" :string)
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-(merge-rule "\IeC {\~"O}" "Ö" :string)
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-(merge-rule "\IeC {\~~O}" "Õ" :string)
-(merge-rule "\IeC {\textpm }" "±" :string)
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-(merge-rule "\IeC {\r A}" "Å" :string)
-(merge-rule "\IeC {\'r}" "ŕ" :string)
-(merge-rule "\IeC {\'R}" "Ŕ" :string)
-(merge-rule "\IeC {\r u}" "ů" :string)
-(merge-rule "\IeC {\r U}" "Ů" :string)
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-(merge-rule "\IeC {\'S}" "Ś" :string)
-(merge-rule "\IeC {\^s}" "ŝ" :string)
-(merge-rule "\IeC {\^S}" "Ŝ" :string)
-(merge-rule "\IeC {\textasciidieresis }" "¨" :string)
-(merge-rule "\IeC {\textasciimacron }" "¯" :string)
-(merge-rule "\IeC {\.{}}" "˙" :string)
-(merge-rule "\IeC {\textasciiacute }" "´" :string)
-(merge-rule "\IeC {\texttimes }" "×" :string)
-(merge-rule "\IeC {\u a}" "ă" :string)
-(merge-rule "\IeC {\u A}" "Ă" :string)
-(merge-rule "\IeC {\u g}" "ğ" :string)
-(merge-rule "\IeC {\u G}" "Ğ" :string)
-(merge-rule "\IeC {\textasciibreve }" "˘" :string)
-(merge-rule "\IeC {\'u}" "ú" :string)
-(merge-rule "\IeC {\'U}" "Ú" :string)
-(merge-rule "\IeC {\`u}" "ù" :string)
-(merge-rule "\IeC {\`U}" "Ù" :string)
-(merge-rule "\IeC {\^u}" "û" :string)
-(merge-rule "\IeC {\^U}" "Û" :string)
-(merge-rule "\IeC {\~"u}" "ü" :string)
-(merge-rule "\IeC {\~"U}" "Ü" :string)
-(merge-rule "\IeC {\u u}" "ŭ" :string)
-(merge-rule "\IeC {\u U}" "Ŭ" :string)
-(merge-rule "\IeC {\v c}" "č" :string)
-(merge-rule "\IeC {\v C}" "Č" :string)
-(merge-rule "\IeC {\v d}" "ď" :string)
-(merge-rule "\IeC {\v D}" "Ď" :string)
-(merge-rule "\IeC {\v e}" "ě" :string)
-(merge-rule "\IeC {\v E}" "Ě" :string)
-(merge-rule "\IeC {\v l}" "ľ" :string)
-(merge-rule "\IeC {\v L}" "Ľ" :string)
-(merge-rule "\IeC {\v n}" "ň" :string)
-(merge-rule "\IeC {\v N}" "Ň" :string)
-(merge-rule "\IeC {\v r}" "ř" :string)
-(merge-rule "\IeC {\v R}" "Ř" :string)
-(merge-rule "\IeC {\v s}" "š" :string)
-(merge-rule "\IeC {\v S}" "Š" :string)
-(merge-rule "\IeC {\textasciicaron }" "ˇ" :string)
-(merge-rule "\IeC {\v t}" "ť" :string)
-(merge-rule "\IeC {\v T}" "Ť" :string)
-(merge-rule "\IeC {\v z}" "ž" :string)
-(merge-rule "\IeC {\v Z}" "Ž" :string)
-(merge-rule "\IeC {\'y}" "ý" :string)
-(merge-rule "\IeC {\'Y}" "Ý" :string)
-(merge-rule "\IeC {\~"y}" "ÿ" :string)
-(merge-rule "\IeC {\'z}" "ź" :string)
-(merge-rule "\IeC {\'Z}" "Ź" :string)
-(merge-rule "\IeC {\.z}" "ż" :string)
-(merge-rule "\IeC {\.Z}" "Ż" :string)
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-(merge-rule "\IeC {\~"Y}" "Ÿ" :string)
-(merge-rule "\IeC {\NG }" "Ŋ" :string)
-(merge-rule "\IeC {\ng }" "ŋ" :string)
-(merge-rule "\IeC {\OE }" "Œ" :string)
-(merge-rule "\IeC {\oe }" "œ" :string)
-(merge-rule "\IeC {\IJ }" "IJ" :string)
-(merge-rule "\IeC {\ij }" "ij" :string)
-(merge-rule "\IeC {\j }" "ȷ" :string)
-(merge-rule "\IeC {\SS }" "ẞ" :string)
diff --git a/documentation/Sphinx/build/latex/LatinRules.xdy b/documentation/Sphinx/build/latex/LatinRules.xdy
deleted file mode 100644
index 99f14a2ee856d0ec3078dd78700f43524f4a702c..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/LatinRules.xdy
+++ /dev/null
@@ -1,607 +0,0 @@
-;; style file for xindy
-;; filename: LatinRules.xdy
-;;
-;; It is based upon xindy's files lang/general/utf8.xdy and
-;; lang/general/utf8-lang.xdy which implement
-;; "a general sorting order for Western European languages"
-;;
-;; The aim for Sphinx is to be able to index in a Cyrillic document
-;; also terms using the Latin alphabets, inclusive of letters
-;; with diacritics. To this effect the xindy rules from lang/general
-;; got manually re-coded to avoid collisions with the encoding
-;; done by xindy for sorting words in Cyrillic languages, which was
-;; observed not to use bytes with octal encoding 0o266 or higher.
-;;
-;; So here we use only 0o266 or higher bytes.
-;; (Ŋ, ŋ, IJ, and ij are absent from
-;; lang/general/utf8.xdy and not included here)
-;; Contributed by the Sphinx team, 2018.
-
-(define-letter-group "A" :prefixes ("�"))
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-(define-letter-group "F" :after "E" :prefixes ("�"))
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-(define-letter-group "K" :after "J" :prefixes ("�"))
-(define-letter-group "L" :after "K" :prefixes ("�"))
-(define-letter-group "M" :after "L" :prefixes ("�"))
-(define-letter-group "N" :after "M" :prefixes ("�"))
-(define-letter-group "O" :after "N" :prefixes ("�"))
-(define-letter-group "P" :after "O" :prefixes ("�"))
-(define-letter-group "Q" :after "P" :prefixes ("�"))
-(define-letter-group "R" :after "Q" :prefixes ("�"))
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-(define-letter-group "T" :after "S" :prefixes ("�"))
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-(define-letter-group "V" :after "U" :prefixes ("�"))
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-(define-letter-group "Z" :after "Y" :prefixes ("�"))
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-(define-rule-set "sphinx-xy-alphabetize"
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-(define-rule-set "sphinx-xy-resolve-diacritics"
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deleted file mode 100644
index c561680ad7527ea0d93e7a2f38501733513802fa..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/Makefile
+++ /dev/null
@@ -1,68 +0,0 @@
-# Makefile for Sphinx LaTeX output
-
-ALLDOCS = $(basename $(wildcard *.tex))
-ALLPDF = $(addsuffix .pdf,$(ALLDOCS))
-ALLDVI = $(addsuffix .dvi,$(ALLDOCS))
-ALLXDV =
-ALLPS = $(addsuffix .ps,$(ALLDOCS))
-ALLIMGS = $(wildcard *.png *.gif *.jpg *.jpeg)
-
-# Prefix for archive names
-ARCHIVEPREFIX =
-# Additional LaTeX options (passed via variables in latexmkrc/latexmkjarc file)
-export LATEXOPTS =
-# Additional latexmk options
-LATEXMKOPTS =
-# format: pdf or dvi (used only by archive targets)
-FMT = pdf
-
-LATEX = latexmk -dvi
-PDFLATEX = latexmk -pdf -dvi- -ps-
-
-
-%.png %.gif %.jpg %.jpeg: FORCE_MAKE
- extractbb '$@'
-
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- $(LATEX) $(LATEXMKOPTS) '$<'
-
-%.ps: %.dvi
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-
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-
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-
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-
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-
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- mkdir $(ARCHIVEPREFIX)docs-$(FMT)
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- rm -r $(ARCHIVEPREFIX)docs-$(FMT)
-
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- cp $(ALLPDF) $(ARCHIVEPREFIX)docs-$(FMT)
- tar cf $(ARCHIVEPREFIX)docs-$(FMT).tar $(ARCHIVEPREFIX)docs-$(FMT)
- rm -r $(ARCHIVEPREFIX)docs-$(FMT)
-
-gz: tar
- gzip -9 < $(ARCHIVEPREFIX)docs-$(FMT).tar > $(ARCHIVEPREFIX)docs-$(FMT).tar.gz
-
-bz2: tar
- bzip2 -9 -k $(ARCHIVEPREFIX)docs-$(FMT).tar
-
-xz: tar
- xz -9 -k $(ARCHIVEPREFIX)docs-$(FMT).tar
-
-clean:
- rm -f *.log *.ind *.aux *.toc *.syn *.idx *.out *.ilg *.pla *.ps *.tar *.tar.gz *.tar.bz2 *.tar.xz $(ALLPDF) $(ALLDVI) $(ALLXDV) *.fls *.fdb_latexmk
-
-.PHONY: all all-pdf all-dvi all-ps clean zip tar gz bz2 xz
-.PHONY: FORCE_MAKE
\ No newline at end of file
diff --git a/documentation/Sphinx/build/latex/flex_extract.aux b/documentation/Sphinx/build/latex/flex_extract.aux
deleted file mode 100644
index a58f80b4a493ca8ac04fa3776d3192022060f561..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.aux
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@@ -1,173 +0,0 @@
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diff --git a/documentation/Sphinx/build/latex/flex_extract.fdb_latexmk b/documentation/Sphinx/build/latex/flex_extract.fdb_latexmk
deleted file mode 100644
index 5b6d168e520dc78a35d68380023a94b908de6ae8..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.fdb_latexmk
+++ /dev/null
@@ -1,169 +0,0 @@
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diff --git a/documentation/Sphinx/build/latex/flex_extract.idx b/documentation/Sphinx/build/latex/flex_extract.idx
deleted file mode 100644
index 00190c2a8355c35b95bea8bf2e3935722c203f83..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.idx
+++ /dev/null
@@ -1,30 +0,0 @@
-\indexentry{MarsRetrieval (module)@\spxentry{MarsRetrieval}\spxextra{module}|hyperpage}{12}
-\indexentry{MarsRetrieval (class in MarsRetrieval)@\spxentry{MarsRetrieval}\spxextra{class in MarsRetrieval}|hyperpage}{12}
-\indexentry{server (MarsRetrieval.MarsRetrieval attribute)@\spxentry{server}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{public (MarsRetrieval.MarsRetrieval attribute)@\spxentry{public}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{marsclass (MarsRetrieval.MarsRetrieval attribute)@\spxentry{marsclass}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{dataset (MarsRetrieval.MarsRetrieval attribute)@\spxentry{dataset}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{type (MarsRetrieval.MarsRetrieval attribute)@\spxentry{type}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{levtype (MarsRetrieval.MarsRetrieval attribute)@\spxentry{levtype}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{12}
-\indexentry{levelist (MarsRetrieval.MarsRetrieval attribute)@\spxentry{levelist}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{repres (MarsRetrieval.MarsRetrieval attribute)@\spxentry{repres}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{date (MarsRetrieval.MarsRetrieval attribute)@\spxentry{date}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{resol (MarsRetrieval.MarsRetrieval attribute)@\spxentry{resol}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{stream (MarsRetrieval.MarsRetrieval attribute)@\spxentry{stream}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{area (MarsRetrieval.MarsRetrieval attribute)@\spxentry{area}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{time (MarsRetrieval.MarsRetrieval attribute)@\spxentry{time}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{step (MarsRetrieval.MarsRetrieval attribute)@\spxentry{step}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{expver (MarsRetrieval.MarsRetrieval attribute)@\spxentry{expver}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{number (MarsRetrieval.MarsRetrieval attribute)@\spxentry{number}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{accuracy (MarsRetrieval.MarsRetrieval attribute)@\spxentry{accuracy}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{grid (MarsRetrieval.MarsRetrieval attribute)@\spxentry{grid}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{gaussian (MarsRetrieval.MarsRetrieval attribute)@\spxentry{gaussian}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{13}
-\indexentry{target (MarsRetrieval.MarsRetrieval attribute)@\spxentry{target}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{14}
-\indexentry{param (MarsRetrieval.MarsRetrieval attribute)@\spxentry{param}\spxextra{MarsRetrieval.MarsRetrieval attribute}|hyperpage}{14}
-\indexentry{data\_retrieve() (MarsRetrieval.MarsRetrieval method)@\spxentry{data\_retrieve()}\spxextra{MarsRetrieval.MarsRetrieval method}|hyperpage}{14}
-\indexentry{display\_info() (MarsRetrieval.MarsRetrieval method)@\spxentry{display\_info()}\spxextra{MarsRetrieval.MarsRetrieval method}|hyperpage}{14}
-\indexentry{print\_infodata\_csv() (MarsRetrieval.MarsRetrieval method)@\spxentry{print\_infodata\_csv()}\spxextra{MarsRetrieval.MarsRetrieval method}|hyperpage}{14}
-\indexentry{disaggregation (module)@\spxentry{disaggregation}\spxextra{module}|hyperpage}{14}
-\indexentry{IA3() (in module disaggregation)@\spxentry{IA3()}\spxextra{in module disaggregation}|hyperpage}{14}
-\indexentry{dapoly() (in module disaggregation)@\spxentry{dapoly()}\spxextra{in module disaggregation}|hyperpage}{15}
-\indexentry{darain() (in module disaggregation)@\spxentry{darain()}\spxextra{in module disaggregation}|hyperpage}{15}
diff --git a/documentation/Sphinx/build/latex/flex_extract.ilg b/documentation/Sphinx/build/latex/flex_extract.ilg
deleted file mode 100644
index 30a178cbdc6811d6e737a2b5ae1a24a4464e2049..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.ilg
+++ /dev/null
@@ -1,7 +0,0 @@
-This is makeindex, version 2.15 [TeX Live 2019/dev] (kpathsea + Thai support).
-Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored).
-Scanning input file flex_extract.idx....done (30 entries accepted, 0 rejected).
-Sorting entries....done (141 comparisons).
-Generating output file flex_extract.ind....done (73 lines written, 0 warnings).
-Output written in flex_extract.ind.
-Transcript written in flex_extract.ilg.
diff --git a/documentation/Sphinx/build/latex/flex_extract.ind b/documentation/Sphinx/build/latex/flex_extract.ind
deleted file mode 100644
index 1f0f4dd2b6adfbc194d043be0e7a49dfe3439372..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.ind
+++ /dev/null
@@ -1,73 +0,0 @@
-\begin{sphinxtheindex}
-\let\bigletter\sphinxstyleindexlettergroup
-\let\spxpagem \sphinxstyleindexpagemain
-\let\spxentry \sphinxstyleindexentry
-\let\spxextra \sphinxstyleindexextra
-
- \bigletter A
- \item \spxentry{accuracy}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{area}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter D
- \item \spxentry{dapoly()}\spxextra{in module disaggregation}, \hyperpage{15}
- \item \spxentry{darain()}\spxextra{in module disaggregation}, \hyperpage{15}
- \item \spxentry{data\_retrieve()}\spxextra{MarsRetrieval.MarsRetrieval method}, \hyperpage{14}
- \item \spxentry{dataset}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
- \item \spxentry{date}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{disaggregation}\spxextra{module}, \hyperpage{14}
- \item \spxentry{display\_info()}\spxextra{MarsRetrieval.MarsRetrieval method}, \hyperpage{14}
-
- \indexspace
- \bigletter E
- \item \spxentry{expver}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter G
- \item \spxentry{gaussian}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{grid}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter I
- \item \spxentry{IA3()}\spxextra{in module disaggregation}, \hyperpage{14}
-
- \indexspace
- \bigletter L
- \item \spxentry{levelist}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{levtype}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
-
- \indexspace
- \bigletter M
- \item \spxentry{marsclass}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
- \item \spxentry{MarsRetrieval}\spxextra{class in MarsRetrieval}, \hyperpage{12}
- \item \spxentry{MarsRetrieval}\spxextra{module}, \hyperpage{12}
-
- \indexspace
- \bigletter N
- \item \spxentry{number}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter P
- \item \spxentry{param}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{14}
- \item \spxentry{print\_infodata\_csv()}\spxextra{MarsRetrieval.MarsRetrieval method},
- \hyperpage{14}
- \item \spxentry{public}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
-
- \indexspace
- \bigletter R
- \item \spxentry{repres}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{resol}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter S
- \item \spxentry{server}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
- \item \spxentry{step}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{stream}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
-
- \indexspace
- \bigletter T
- \item \spxentry{target}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{14}
- \item \spxentry{time}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{13}
- \item \spxentry{type}\spxextra{MarsRetrieval.MarsRetrieval attribute}, \hyperpage{12}
-
-\end{sphinxtheindex}
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deleted file mode 100644
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-%% Generated by Sphinx.
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-\setcounter{tocdepth}{2}
-
-
-
-\title{flex\_extract Documentation}
-\date{Mar 07, 2019}
-\release{7.1 alpha}
-\author{Anne Philipp and Leopold Haimberger}
-\newcommand{\sphinxlogo}{\vbox{}}
-\renewcommand{\releasename}{Release}
-\makeindex
-\begin{document}
-
-\pagestyle{empty}
-\sphinxmaketitle
-\pagestyle{plain}
-\sphinxtableofcontents
-\pagestyle{normal}
-\phantomsection\label{\detokenize{index::doc}}
-
-
-flex\_extract is a software to retrieve meteorological fields from the European Centre for Medium-Range Weather Forecasts (ECMWF) Mars archive to server as input files for the FLEXTRA/FLEXPART Atmospheric Transport Modelling system.
-
-All third-party software and libraries required by flex\_extract are open source and free of charge.
-
-
-
-\begin{sphinxadmonition}{note}{Note:}
-!{[}{]}{[}/documentation/Sphinx/source/\_static/cc-by-40.png{]}
-This work is licensed under the Creative Commons Attribution 4.0
-International License. To view a copy of this license, visit
-\sphinxurl{http://creativecommons.org/licenses/by/4.0/} or send a letter to
-Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-\end{sphinxadmonition}
-
-
-\chapter{Downloads}
-\label{\detokenize{downloads:downloads}}\label{\detokenize{downloads::doc}}
-Describe download options of flex\_extract ….
-\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Download tar-balls}
-\label{\detokenize{downloads/tar_balls:download-tar-balls}}\label{\detokenize{downloads/tar_balls::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Git Repository}
-\label{\detokenize{downloads/git_repo:git-repository}}\label{\detokenize{downloads/git_repo::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{History of Changes}
-\label{\detokenize{downloads/history_changes:history-of-changes}}\label{\detokenize{downloads/history_changes::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\chapter{Installation}
-\label{\detokenize{installation:installation}}\label{\detokenize{installation::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Requirements}
-\label{\detokenize{installation/requirements:requirements}}\label{\detokenize{installation/requirements::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Operating modes}
-\label{\detokenize{installation/oper_modes:operating-modes}}\label{\detokenize{installation/oper_modes::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Installation test}
-\label{\detokenize{installation/test_install:installation-test}}\label{\detokenize{installation/test_install::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
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-\chapter{Program Structure}
-\label{\detokenize{program_structure:program-structure}}\label{\detokenize{program_structure::doc}}
-Describe structure of flex\_extract ….
-\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Program Overview}
-\label{\detokenize{program_structure/prog_overview:program-overview}}\label{\detokenize{program_structure/prog_overview::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
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-UNDER CONSTRUCTION
-\end{quote}
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-\section{How to use flex\_extract}
-\label{\detokenize{user_guide/how_to:how-to-use-flex-extract}}\label{\detokenize{user_guide/how_to::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{CONTROL-file templates}
-\label{\detokenize{user_guide/control_templates:control-file-templates}}\label{\detokenize{user_guide/control_templates::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
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-\chapter{Auto Generated Documentation}
-\label{\detokenize{api:auto-generated-documentation}}\label{\detokenize{api::doc}}
-\begin{sphinxShadowBox}
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-\item {}
-\phantomsection\label{\detokenize{api:id1}}{\hyperref[\detokenize{api:porgrams}]{\sphinxcrossref{Porgrams}}}
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-\item {}
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-\subsection{EcFlexpart}
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-\subsection{GribUtil}
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-\subsection{MarsRetrieval}
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-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval}}\pysiglinewithargsret{\sphinxbfcode{\sphinxupquote{class }}\sphinxcode{\sphinxupquote{MarsRetrieval.}}\sphinxbfcode{\sphinxupquote{MarsRetrieval}}}{\emph{server}, \emph{public}, \emph{marsclass='EA'}, \emph{dataset=''}, \emph{type=''}, \emph{levtype=''}, \emph{levelist=''}, \emph{repres=''}, \emph{date=''}, \emph{resol=''}, \emph{stream=''}, \emph{area=''}, \emph{time=''}, \emph{step=''}, \emph{expver='1'}, \emph{number=''}, \emph{accuracy=''}, \emph{grid=''}, \emph{gaussian=''}, \emph{target=''}, \emph{param=''}}{}
-Specific syntax and content for submission of MARS retrievals.
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-A MARS revtrieval has a specific syntax with a selection of keywords and
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-A description of MARS keywords/arguments and examples of their
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-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.server}}\pysigline{\sphinxbfcode{\sphinxupquote{server}}}
-This is the connection to the ECMWF data servers.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-ECMWFService or ECMWFDataServer
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{public (MarsRetrieval.MarsRetrieval attribute)@\spxentry{public}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.public}}\pysigline{\sphinxbfcode{\sphinxupquote{public}}}
-Decides which Web API Server version is used.
-\begin{quote}\begin{description}
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-int
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
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-\index{marsclass (MarsRetrieval.MarsRetrieval attribute)@\spxentry{marsclass}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.marsclass}}\pysigline{\sphinxbfcode{\sphinxupquote{marsclass}}}
-Characterisation of dataset.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{dataset (MarsRetrieval.MarsRetrieval attribute)@\spxentry{dataset}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.dataset}}\pysigline{\sphinxbfcode{\sphinxupquote{dataset}}}
-For public datasets there is the specific naming and parameter
-dataset which has to be used to characterize the type of
-data.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{type (MarsRetrieval.MarsRetrieval attribute)@\spxentry{type}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.type}}\pysigline{\sphinxbfcode{\sphinxupquote{type}}}
-Determines the type of fields to be retrieved.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{levtype (MarsRetrieval.MarsRetrieval attribute)@\spxentry{levtype}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.levtype}}\pysigline{\sphinxbfcode{\sphinxupquote{levtype}}}
-Denotes type of level.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{levelist (MarsRetrieval.MarsRetrieval attribute)@\spxentry{levelist}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.levelist}}\pysigline{\sphinxbfcode{\sphinxupquote{levelist}}}
-Specifies the required levels.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{repres (MarsRetrieval.MarsRetrieval attribute)@\spxentry{repres}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.repres}}\pysigline{\sphinxbfcode{\sphinxupquote{repres}}}
-Selects the representation of the archived data.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{date (MarsRetrieval.MarsRetrieval attribute)@\spxentry{date}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.date}}\pysigline{\sphinxbfcode{\sphinxupquote{date}}}
-Specifies the Analysis date, the Forecast base date or
-Observations date.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{resol (MarsRetrieval.MarsRetrieval attribute)@\spxentry{resol}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.resol}}\pysigline{\sphinxbfcode{\sphinxupquote{resol}}}
-Specifies the desired triangular truncation of retrieved data,
-before carrying out any other selected post-processing.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{stream (MarsRetrieval.MarsRetrieval attribute)@\spxentry{stream}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.stream}}\pysigline{\sphinxbfcode{\sphinxupquote{stream}}}
-Identifies the forecasting system used to generate the data.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{area (MarsRetrieval.MarsRetrieval attribute)@\spxentry{area}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.area}}\pysigline{\sphinxbfcode{\sphinxupquote{area}}}
-Specifies the desired sub-area of data to be extracted.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
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-\index{time (MarsRetrieval.MarsRetrieval attribute)@\spxentry{time}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.time}}\pysigline{\sphinxbfcode{\sphinxupquote{time}}}
-Specifies the time of the data in hours and minutes.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{step (MarsRetrieval.MarsRetrieval attribute)@\spxentry{step}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.step}}\pysigline{\sphinxbfcode{\sphinxupquote{step}}}
-Specifies the forecast time step from forecast base time.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{expver (MarsRetrieval.MarsRetrieval attribute)@\spxentry{expver}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.expver}}\pysigline{\sphinxbfcode{\sphinxupquote{expver}}}
-The version of the dataset.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{number (MarsRetrieval.MarsRetrieval attribute)@\spxentry{number}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.number}}\pysigline{\sphinxbfcode{\sphinxupquote{number}}}
-Selects the member in ensemble forecast run.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{accuracy (MarsRetrieval.MarsRetrieval attribute)@\spxentry{accuracy}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.accuracy}}\pysigline{\sphinxbfcode{\sphinxupquote{accuracy}}}
-Specifies the number of bits per value to be used in the
-generated GRIB coded fields.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{grid (MarsRetrieval.MarsRetrieval attribute)@\spxentry{grid}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.grid}}\pysigline{\sphinxbfcode{\sphinxupquote{grid}}}
-Specifies the output grid which can be either a Gaussian grid
-or a Latitude/Longitude grid.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{gaussian (MarsRetrieval.MarsRetrieval attribute)@\spxentry{gaussian}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.gaussian}}\pysigline{\sphinxbfcode{\sphinxupquote{gaussian}}}
-This parameter is deprecated and should no longer be used.
-Specifies the desired type of Gaussian grid for the output.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{target (MarsRetrieval.MarsRetrieval attribute)@\spxentry{target}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.target}}\pysigline{\sphinxbfcode{\sphinxupquote{target}}}
-Specifies a file into which data is to be written after
-retrieval or manipulation.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{param (MarsRetrieval.MarsRetrieval attribute)@\spxentry{param}\spxextra{MarsRetrieval.MarsRetrieval attribute}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.param}}\pysigline{\sphinxbfcode{\sphinxupquote{param}}}
-Specifies the meteorological parameter.
-\begin{quote}\begin{description}
-\item[{Type}] \leavevmode
-str, optional
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-\index{data\_retrieve() (MarsRetrieval.MarsRetrieval method)@\spxentry{data\_retrieve()}\spxextra{MarsRetrieval.MarsRetrieval method}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.data_retrieve}}\pysiglinewithargsret{\sphinxbfcode{\sphinxupquote{data\_retrieve}}}{}{}
-Submits a MARS retrieval. Depending on the existence of
-ECMWF Web-API or CDS API it is submitted via Python or a
-subprocess in the Shell. The parameter for the mars retrieval
-are taken from the defined class attributes.
-
-\end{fulllineitems}
-
-\index{display\_info() (MarsRetrieval.MarsRetrieval method)@\spxentry{display\_info()}\spxextra{MarsRetrieval.MarsRetrieval method}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.display_info}}\pysiglinewithargsret{\sphinxbfcode{\sphinxupquote{display\_info}}}{}{}
-Prints all class attributes and their values to the
-standard output.
-
-\end{fulllineitems}
-
-\index{print\_infodata\_csv() (MarsRetrieval.MarsRetrieval method)@\spxentry{print\_infodata\_csv()}\spxextra{MarsRetrieval.MarsRetrieval method}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:MarsRetrieval.MarsRetrieval.print_infodata_csv}}\pysiglinewithargsret{\sphinxbfcode{\sphinxupquote{print\_infodata\_csv}}}{\emph{inputdir}, \emph{request\_number}}{}
-Write all request parameter in alpabetical order into a “csv” file.
-\begin{quote}\begin{description}
-\item[{Parameters}] \leavevmode\begin{itemize}
-\item {}
-\sphinxstyleliteralstrong{\sphinxupquote{inputdir}} (\sphinxstyleliteralemphasis{\sphinxupquote{str}}) \textendash{} The path where all data from the retrievals are stored.
-
-\item {}
-\sphinxstyleliteralstrong{\sphinxupquote{request\_number}} (\sphinxstyleliteralemphasis{\sphinxupquote{int}}) \textendash{} Number of mars requests for flux and non-flux data.
-
-\end{itemize}
-
-\end{description}\end{quote}
-
-\end{fulllineitems}
-
-
-\end{fulllineitems}
-
-
-
-\subsection{UioFiles}
-\label{\detokenize{api:uiofiles}}
-
-\section{Modules}
-\label{\detokenize{api:modules}}
-
-\subsection{get\_mars\_data}
-\label{\detokenize{api:get-mars-data}}
-
-\subsection{prepare\_flexpart}
-\label{\detokenize{api:prepare-flexpart}}
-
-\subsection{tools}
-\label{\detokenize{api:tools}}
-
-\subsection{disaggregation}
-\label{\detokenize{api:module-disaggregation}}\label{\detokenize{api:disaggregation}}\index{disaggregation (module)@\spxentry{disaggregation}\spxextra{module}}
-Disaggregation of deaccumulated flux data from an ECMWF model FG field.
-\begin{description}
-\item[{Initially the flux data to be concerned are:}] \leavevmode\begin{itemize}
-\item {}
-large-scale precipitation
-
-\item {}
-convective precipitation
-
-\item {}
-surface sensible heat flux
-
-\item {}
-surface solar radiation
-
-\item {}
-u stress
-
-\item {}
-v stress
-
-\end{itemize}
-
-\end{description}
-
-Different versions of disaggregation is provided for rainfall
-data (darain, modified linear) and the surface fluxes and
-stress data (dapoly, cubic polynomial).
-\index{IA3() (in module disaggregation)@\spxentry{IA3()}\spxextra{in module disaggregation}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:disaggregation.IA3}}\pysiglinewithargsret{\sphinxcode{\sphinxupquote{disaggregation.}}\sphinxbfcode{\sphinxupquote{IA3}}}{\emph{g}}{}
-Interpolation with a non-negative geometric mean based algorithm.
-
-The original grid is reconstructed by adding two sampling points in each
-data series interval. This subgrid is used to keep all information during
-the interpolation within the associated interval. Additionally, an advanced
-monotonicity filter is applied to improve the monotonicity properties of
-the series.
-
-\begin{sphinxadmonition}{note}{Note:}
-(C) Copyright 2017-2019
-Sabine Hittmeir, Anne Philipp, Petra Seibert
-
-This work is licensed under the Creative Commons Attribution 4.0
-International License. To view a copy of this license, visit
-\sphinxurl{http://creativecommons.org/licenses/by/4.0/} or send a letter to
-Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-\end{sphinxadmonition}
-\begin{quote}\begin{description}
-\item[{Parameters}] \leavevmode
-\sphinxstyleliteralstrong{\sphinxupquote{g}} (\sphinxstyleliteralemphasis{\sphinxupquote{list of float}}) \textendash{} Complete data series that will be interpolated having
-the dimension of the original raw series.
-
-\item[{Returns}] \leavevmode
-\sphinxstylestrong{f} \textendash{} The interpolated data series with additional subgrid points.
-Its dimension is equal to the length of the input data series
-times three.
-
-\item[{Return type}] \leavevmode
-list of float
-
-\end{description}\end{quote}
-\subsubsection*{References}
-
-For more information see article:
-Hittmeir, S.; Philipp, A.; Seibert, P. (2017): A conservative
-interpolation scheme for extensive quantities with application to the
-Lagrangian particle dispersion model FLEXPART.,
-Geoscientific Model Development
-
-\end{fulllineitems}
-
-\index{dapoly() (in module disaggregation)@\spxentry{dapoly()}\spxextra{in module disaggregation}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:disaggregation.dapoly}}\pysiglinewithargsret{\sphinxcode{\sphinxupquote{disaggregation.}}\sphinxbfcode{\sphinxupquote{dapoly}}}{\emph{alist}}{}
-Cubic polynomial interpolation of deaccumulated fluxes.
-
-Interpolation of deaccumulated fluxes of an ECMWF model FG field
-using a cubic polynomial solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which
-generates a new, disaggregated value which is output at the
-central point of the 4 accumulation timespans.
-This new point is used for linear interpolation of the complete
-timeseries afterwards.
-\begin{quote}\begin{description}
-\item[{Parameters}] \leavevmode
-\sphinxstyleliteralstrong{\sphinxupquote{alist}} (\sphinxstyleliteralemphasis{\sphinxupquote{list of array of float}}) \textendash{} List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. {[}{[}array\_t1{]}, {[}array\_t2{]}, {[}array\_t3{]}, {[}array\_t4{]}{]}
-
-\item[{Returns}] \leavevmode
-\sphinxstylestrong{nfield} \textendash{} Interpolated flux at central point of accumulation timespan.
-
-\item[{Return type}] \leavevmode
-array of float
-
-\end{description}\end{quote}
-
-\begin{sphinxadmonition}{note}{Note:}\begin{description}
-\item[{March 2000}] \leavevmode{[}P. JAMES{]}
-Original author
-
-\item[{June 2003}] \leavevmode{[}A. BECK{]}
-Adaptations
-
-\item[{November 2015}] \leavevmode{[}Leopold Haimberger (University of Vienna){]}
-Migration from Fortran to Python
-
-\end{description}
-\end{sphinxadmonition}
-
-\end{fulllineitems}
-
-\index{darain() (in module disaggregation)@\spxentry{darain()}\spxextra{in module disaggregation}}
-
-\begin{fulllineitems}
-\phantomsection\label{\detokenize{api:disaggregation.darain}}\pysiglinewithargsret{\sphinxcode{\sphinxupquote{disaggregation.}}\sphinxbfcode{\sphinxupquote{darain}}}{\emph{alist}}{}
-Linear interpolation of deaccumulated fluxes.
-
-Interpolation of deaccumulated fluxes of an ECMWF model FG rainfall
-field using a modified linear solution which conserves the integrals
-of the fluxes within each timespan.
-Disaggregation is done for 4 accumluated timespans which generates
-a new, disaggregated value which is output at the central point
-of the 4 accumulation timespans. This new point is used for linear
-interpolation of the complete timeseries afterwards.
-\begin{quote}\begin{description}
-\item[{Parameters}] \leavevmode
-\sphinxstyleliteralstrong{\sphinxupquote{alist}} (\sphinxstyleliteralemphasis{\sphinxupquote{list of array of float}}) \textendash{} List of 4 timespans as 2-dimensional, horizontal fields.
-E.g. {[}{[}array\_t1{]}, {[}array\_t2{]}, {[}array\_t3{]}, {[}array\_t4{]}{]}
-
-\item[{Returns}] \leavevmode
-\sphinxstylestrong{nfield} \textendash{} Interpolated flux at central point of accumulation timespan.
-
-\item[{Return type}] \leavevmode
-array of float
-
-\end{description}\end{quote}
-
-\begin{sphinxadmonition}{note}{Note:}\begin{description}
-\item[{March 2000}] \leavevmode{[}P. JAMES{]}
-Original author
-
-\item[{June 2003}] \leavevmode{[}A. BECK{]}
-Adaptations
-
-\item[{November 2015}] \leavevmode{[}Leopold Haimberger (University of Vienna){]}
-Migration from Fortran to Python
-
-\end{description}
-\end{sphinxadmonition}
-
-\end{fulllineitems}
-
-
-
-\chapter{Support}
-\label{\detokenize{support:support}}\label{\detokenize{support::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Ticket System}
-\label{\detokenize{support/ticket_system:ticket-system}}\label{\detokenize{support/ticket_system::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Mailing Lists}
-\label{\detokenize{support/mailing_list:mailing-lists}}\label{\detokenize{support/mailing_list::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{Known Bugs and Issues}
-\label{\detokenize{support/known_bugs_issues:known-bugs-and-issues}}\label{\detokenize{support/known_bugs_issues::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\section{FAQ - Frequently asked questions}
-\label{\detokenize{support/faq:faq-frequently-asked-questions}}\label{\detokenize{support/faq::doc}}\begin{quote}
-
-UNDER CONSTRUCTION
-\end{quote}
-
-
-\chapter{Indices and tables}
-\label{\detokenize{index:indices-and-tables}}\begin{itemize}
-\item {}
-\DUrole{xref,std,std-ref}{genindex}
-
-\item {}
-\DUrole{xref,std,std-ref}{modindex}
-
-\item {}
-\DUrole{xref,std,std-ref}{search}
-
-\end{itemize}
-
-
-\renewcommand{\indexname}{Python Module Index}
-\begin{sphinxtheindex}
-\let\bigletter\sphinxstyleindexlettergroup
-\bigletter{d}
-\item\relax\sphinxstyleindexentry{disaggregation}\sphinxstyleindexpageref{api:\detokenize{module-disaggregation}}
-\indexspace
-\bigletter{m}
-\item\relax\sphinxstyleindexentry{MarsRetrieval}\sphinxstyleindexpageref{api:\detokenize{module-MarsRetrieval}}
-\end{sphinxtheindex}
-
-\renewcommand{\indexname}{Index}
-\printindex
-\end{document}
\ No newline at end of file
diff --git a/documentation/Sphinx/build/latex/flex_extract.toc b/documentation/Sphinx/build/latex/flex_extract.toc
deleted file mode 100644
index f3ae2195ad2bd7d5cf16da47ea4229f8ada01f57..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/flex_extract.toc
+++ /dev/null
@@ -1,39 +0,0 @@
-\babel@toc {english}{}
-\contentsline {chapter}{\numberline {1}Downloads}{3}{chapter.1}%
-\contentsline {section}{\numberline {1.1}Download tar-balls}{3}{section.1.1}%
-\contentsline {section}{\numberline {1.2}Git Repository}{3}{section.1.2}%
-\contentsline {section}{\numberline {1.3}History of Changes}{3}{section.1.3}%
-\contentsline {chapter}{\numberline {2}Installation}{5}{chapter.2}%
-\contentsline {section}{\numberline {2.1}Requirements}{5}{section.2.1}%
-\contentsline {section}{\numberline {2.2}Operating modes}{5}{section.2.2}%
-\contentsline {section}{\numberline {2.3}Installation test}{5}{section.2.3}%
-\contentsline {chapter}{\numberline {3}Program Structure}{7}{chapter.3}%
-\contentsline {section}{\numberline {3.1}Program Overview}{7}{section.3.1}%
-\contentsline {section}{\numberline {3.2}Program Components}{7}{section.3.2}%
-\contentsline {section}{\numberline {3.3}Program Flow}{7}{section.3.3}%
-\contentsline {chapter}{\numberline {4}User Guide}{9}{chapter.4}%
-\contentsline {section}{\numberline {4.1}How to use flex\_extract}{9}{section.4.1}%
-\contentsline {section}{\numberline {4.2}CONTROL-file templates}{9}{section.4.2}%
-\contentsline {chapter}{\numberline {5}Auto Generated Documentation}{11}{chapter.5}%
-\contentsline {section}{\numberline {5.1}Porgrams}{12}{section.5.1}%
-\contentsline {subsection}{\numberline {5.1.1}install}{12}{subsection.5.1.1}%
-\contentsline {subsection}{\numberline {5.1.2}submit}{12}{subsection.5.1.2}%
-\contentsline {section}{\numberline {5.2}Classes}{12}{section.5.2}%
-\contentsline {subsection}{\numberline {5.2.1}ControlFile}{12}{subsection.5.2.1}%
-\contentsline {subsection}{\numberline {5.2.2}EcFlexpart}{12}{subsection.5.2.2}%
-\contentsline {subsection}{\numberline {5.2.3}GribUtil}{12}{subsection.5.2.3}%
-\contentsline {subsection}{\numberline {5.2.4}MarsRetrieval}{12}{subsection.5.2.4}%
-\contentsline {subsection}{\numberline {5.2.5}UioFiles}{14}{subsection.5.2.5}%
-\contentsline {section}{\numberline {5.3}Modules}{14}{section.5.3}%
-\contentsline {subsection}{\numberline {5.3.1}get\_mars\_data}{14}{subsection.5.3.1}%
-\contentsline {subsection}{\numberline {5.3.2}prepare\_flexpart}{14}{subsection.5.3.2}%
-\contentsline {subsection}{\numberline {5.3.3}tools}{14}{subsection.5.3.3}%
-\contentsline {subsection}{\numberline {5.3.4}disaggregation}{14}{subsection.5.3.4}%
-\contentsline {chapter}{\numberline {6}Support}{17}{chapter.6}%
-\contentsline {section}{\numberline {6.1}Ticket System}{17}{section.6.1}%
-\contentsline {section}{\numberline {6.2}Mailing Lists}{17}{section.6.2}%
-\contentsline {section}{\numberline {6.3}Known Bugs and Issues}{17}{section.6.3}%
-\contentsline {section}{\numberline {6.4}FAQ - Frequently asked questions}{17}{section.6.4}%
-\contentsline {chapter}{\numberline {7}Indices and tables}{19}{chapter.7}%
-\contentsline {chapter}{Python Module Index}{21}{section*.45}%
-\contentsline {chapter}{Index}{23}{section*.46}%
diff --git a/documentation/Sphinx/build/latex/footnotehyper-sphinx.sty b/documentation/Sphinx/build/latex/footnotehyper-sphinx.sty
deleted file mode 100644
index b6692cfb859b90c91dff079bb08fc12bbde2ccd1..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/footnotehyper-sphinx.sty
+++ /dev/null
@@ -1,269 +0,0 @@
-\NeedsTeXFormat{LaTeX2e}
-\ProvidesPackage{footnotehyper-sphinx}%
- [2017/10/27 v1.7 hyperref aware footnote.sty for sphinx (JFB)]
-%%
-%% Package: footnotehyper-sphinx
-%% Version: based on footnotehyper.sty 2017/03/07 v1.0
-%% as available at https://www.ctan.org/pkg/footnotehyper
-%% License: the one applying to Sphinx
-%%
-%% Refer to the PDF documentation at https://www.ctan.org/pkg/footnotehyper for
-%% the code comments.
-%%
-%% Differences:
-%% 1. a partial tabulary compatibility layer added (enough for Sphinx mark-up),
-%% 2. use of \spx@opt@BeforeFootnote from sphinx.sty,
-%% 3. use of \sphinxunactivateextrasandspace from sphinx.sty,
-%% 4. macro definition \sphinxfootnotemark,
-%% 5. macro definition \sphinxlongtablepatch
-%% 6. replaced an \undefined by \@undefined
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-\newdimen\FNH@width
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-\newif\ifFNH@savingnotes
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- \let\FNH@latex@footnotetext\footnotetext
- \let\FNH@H@@footnotetext \@footnotetext
- \newenvironment{savenotes}
- {\FNH@savenotes\ignorespaces}{\FNH@spewnotes\ignorespacesafterend}%
- \let\spewnotes \FNH@spewnotes
- \let\footnote \FNH@footnote
- \let\footnotetext \FNH@footnotetext
- \let\endfootnote \FNH@endfntext
- \let\endfootnotetext\FNH@endfntext
- \@ifpackageloaded{hyperref}
- {\ifHy@hyperfootnotes
- \let\FNH@H@@footnotetext\H@@footnotetext
- \else
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- {\let\FNH@hyper@fntext\FNH@nohyp@fntext}%
-}%
-\def\FNH@hyper@fntext{\FNH@fntext\FNH@hyper@fntext@i}%
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- \expandafter\expandafter\expandafter\FNH@check@c
- \expandafter\meaning\expandafter\FNH@prefntext
- \meaning\FNH@postfntext1.2!3?4,\FNH@check@c\relax
-}%
-\def\FNH@check@c #11.2!3?4,#2#3\relax{%
- \ifx\FNH@check@c#2\expandafter\@gobble\fi\FNH@bad@makefntext@alert
-}%
-% slight reformulation for Sphinx
-\def\FNH@bad@makefntext@alert{%
- \PackageWarningNoLine{footnotehyper-sphinx}%
- {Footnotes will be sub-optimal, sorry. This is due to the document class or^^J
- some package modifying macro \string\@makefntext.^^J
- You can try to report this incompatibility at^^J
- https://github.com/sphinx-doc/sphinx with this info:}%
- \typeout{\meaning\@makefntext}%
- \let\FNH@prefntext\@empty\let\FNH@postfntext\@empty
-}%
-% this macro from original footnote.sty is not used anymore by Sphinx
-% but for simplicity sake let's just keep it as is
-\def\makesavenoteenv{\@ifnextchar[\FNH@msne@ii\FNH@msne@i}%]
-\def\FNH@msne@i #1{%
- \expandafter\let\csname FNH$#1\expandafter\endcsname %$
- \csname #1\endcsname
- \expandafter\let\csname endFNH$#1\expandafter\endcsname %$
- \csname end#1\endcsname
- \FNH@msne@ii[#1]{FNH$#1}%$
-}%
-\def\FNH@msne@ii[#1]#2{%
- \expandafter\edef\csname#1\endcsname{%
- \noexpand\savenotes
- \expandafter\noexpand\csname#2\endcsname
- }%
- \expandafter\edef\csname end#1\endcsname{%
- \expandafter\noexpand\csname end#2\endcsname
- \noexpand\expandafter
- \noexpand\spewnotes
- \noexpand\if@endpe\noexpand\@endpetrue\noexpand\fi
- }%
-}%
-% end of footnotehyper 2017/02/16 v0.99
-% some extras for Sphinx :
-% \sphinxfootnotemark: usable in section titles and silently removed from TOCs.
-\def\sphinxfootnotemark [#1]%
- {\ifx\thepage\relax\else\protect\spx@opt@BeforeFootnote
- \protect\footnotemark[#1]\fi}%
-\AtBeginDocument{%
- % let hyperref less complain
- \pdfstringdefDisableCommands{\def\sphinxfootnotemark [#1]{}}%
- % to obtain hyperlinked footnotes in longtable environment we must replace
- % hyperref's patch of longtable's patch of \@footnotetext by our own
- \let\LT@p@ftntext\FNH@hyper@fntext
- % this *requires* longtable to be used always wrapped in savenotes environment
-}%
-\endinput
-%%
-%% End of file `footnotehyper-sphinx.sty'.
diff --git a/documentation/Sphinx/build/latex/latexmkjarc b/documentation/Sphinx/build/latex/latexmkjarc
deleted file mode 100644
index 5b315d6c9cf569ec35a25593c9b47e12f212a59f..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/latexmkjarc
+++ /dev/null
@@ -1,22 +0,0 @@
-$latex = 'platex ' . $ENV{'LATEXOPTS'} . ' -kanji=utf8 %O %S';
-$dvipdf = 'dvipdfmx %O -o %D %S';
-$makeindex = 'internal mendex %S %B %D';
-sub mendex {
- my ($source, $basename, $destination) = @_;
- my $dictfile = $basename . ".dic";
- unlink($destination);
- system("mendex", "-U", "-f", "-d", $dictfile, "-s", "python.ist", $source);
- if ($? > 0) {
- print("mendex exited with error code $? (ignored)\n");
- }
- if (!-e $destination) {
- # create an empty .ind file if nothing
- open(FH, ">" . $destination);
- close(FH);
- }
- return 0;
-}
-add_cus_dep( "glo", "gls", 0, "makeglo" );
-sub makeglo {
- return system( "mendex -J -f -s gglo.ist -o '$_[0].gls' '$_[0].glo'" );
-}
diff --git a/documentation/Sphinx/build/latex/latexmkrc b/documentation/Sphinx/build/latex/latexmkrc
deleted file mode 100644
index bba17fa6bc6aa2e1a0f08088b7bd685077463e8e..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/latexmkrc
+++ /dev/null
@@ -1,9 +0,0 @@
-$latex = 'latex ' . $ENV{'LATEXOPTS'} . ' %O %S';
-$pdflatex = 'pdflatex ' . $ENV{'LATEXOPTS'} . ' %O %S';
-$lualatex = 'lualatex ' . $ENV{'LATEXOPTS'} . ' %O %S';
-$xelatex = 'xelatex --no-pdf ' . $ENV{'LATEXOPTS'} . ' %O %S';
-$makeindex = 'makeindex -s python.ist %O -o %D %S';
-add_cus_dep( "glo", "gls", 0, "makeglo" );
-sub makeglo {
- return system( "makeindex -s gglo.ist -o '$_[0].gls' '$_[0].glo'" );
-}
\ No newline at end of file
diff --git a/documentation/Sphinx/build/latex/make.bat b/documentation/Sphinx/build/latex/make.bat
deleted file mode 100644
index 94bda2139156340fc42bb1cb678e49ac9ac8d3c6..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/make.bat
+++ /dev/null
@@ -1,31 +0,0 @@
-@ECHO OFF
-
-REM Command file for Sphinx documentation
-
-pushd %~dp0
-
-set PDFLATEX=latexmk -pdf -dvi- -ps-
-
-set "LATEXOPTS= "
-
-if "%1" == "" goto all-pdf
-
-if "%1" == "all-pdf" (
- :all-pdf
- for %%i in (*.tex) do (
- %PDFLATEX% %LATEXMKOPTS% %%i
- )
- goto end
-)
-
-if "%1" == "all-pdf-ja" (
- goto all-pdf
-)
-
-if "%1" == "clean" (
- del /q /s *.dvi *.log *.ind *.aux *.toc *.syn *.idx *.out *.ilg *.pla *.ps *.tar *.tar.gz *.tar.bz2 *.tar.xz *.fls *.fdb_latexmk
- goto end
-)
-
-:end
-popd
\ No newline at end of file
diff --git a/documentation/Sphinx/build/latex/python.ist b/documentation/Sphinx/build/latex/python.ist
deleted file mode 100644
index 70536a6683577925167e84e0b0f6a06228754d0a..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/python.ist
+++ /dev/null
@@ -1,16 +0,0 @@
-line_max 100
-headings_flag 1
-heading_prefix " \\bigletter "
-
-preamble "\\begin{sphinxtheindex}
-\\let\\bigletter\\sphinxstyleindexlettergroup
-\\let\\spxpagem \\sphinxstyleindexpagemain
-\\let\\spxentry \\sphinxstyleindexentry
-\\let\\spxextra \\sphinxstyleindexextra
-
-"
-
-postamble "\n\n\\end{sphinxtheindex}\n"
-
-symhead_positive "{\\sphinxsymbolsname}"
-numhead_positive "{\\sphinxnumbersname}"
diff --git a/documentation/Sphinx/build/latex/sphinx.sty b/documentation/Sphinx/build/latex/sphinx.sty
deleted file mode 100644
index de6664cd1f8b9b4e1e03211200cf325b9098a7ed..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinx.sty
+++ /dev/null
@@ -1,1826 +0,0 @@
-%
-% sphinx.sty
-%
-% Adapted from the old python.sty, mostly written by Fred Drake,
-% by Georg Brandl.
-%
-
-\NeedsTeXFormat{LaTeX2e}[1995/12/01]
-\ProvidesPackage{sphinx}[2019/01/12 v1.8.4 LaTeX package (Sphinx markup)]
-
-% provides \ltx@ifundefined
-% (many packages load ltxcmds: graphicx does for pdftex and lualatex but
-% not xelatex, and anyhow kvoptions does, but it may be needed in future to
-% use \sphinxdeprecationwarning earlier, and it needs \ltx@ifundefined)
-\RequirePackage{ltxcmds}
-
-%% for deprecation warnings
-\newcommand\sphinxdeprecationwarning[4]{% #1 the deprecated macro or name,
-% #2 = when deprecated, #3 = when removed, #4 = additional info
- \edef\spx@tempa{\detokenize{#1}}%
- \ltx@ifundefined{sphinx_depr_\spx@tempa}{%
- \global\expandafter\let\csname sphinx_depr_\spx@tempa\endcsname\spx@tempa
- \expandafter\AtEndDocument\expandafter{\expandafter\let\expandafter
- \sphinxdeprecatedmacro\csname sphinx_depr_\spx@tempa\endcsname
- \PackageWarningNoLine{sphinx}{^^J**** SPHINX DEPRECATION WARNING:^^J
- \sphinxdeprecatedmacro^^J
- \@spaces- is deprecated at Sphinx #2^^J
- \@spaces- and removed at Sphinx #3.^^J
- #4^^J****}}%
- }{% warning already emitted (at end of latex log), don't repeat
- }}
-
-
-%% PACKAGES
-%
-% we delay handling of options to after having loaded packages, because
-% of the need to use \definecolor.
-\RequirePackage{graphicx}
-\@ifclassloaded{memoir}{}{\RequirePackage{fancyhdr}}
-% for \text macro and \iffirstchoice@ conditional even if amsmath not loaded
-\RequirePackage{amstext}
-\RequirePackage{textcomp}% "warn" option issued from template
-\RequirePackage{titlesec}
-\@ifpackagelater{titlesec}{2016/03/15}%
- {\@ifpackagelater{titlesec}{2016/03/21}%
- {}%
- {\newif\ifsphinx@ttlpatch@ok
- \IfFileExists{etoolbox.sty}{%
- \RequirePackage{etoolbox}%
- \patchcmd{\ttlh@hang}{\parindent\z@}{\parindent\z@\leavevmode}%
- {\sphinx@ttlpatch@oktrue}{}%
- \ifsphinx@ttlpatch@ok
- \patchcmd{\ttlh@hang}{\noindent}{}{}{\sphinx@ttlpatch@okfalse}%
- \fi
- }{}%
- \ifsphinx@ttlpatch@ok
- \typeout{^^J Package Sphinx Info: ^^J
- **** titlesec 2.10.1 successfully patched for bugfix ****^^J}%
- \else
- \AtEndDocument{\PackageWarningNoLine{sphinx}{^^J%
-******** titlesec 2.10.1 has a bug, (section numbers disappear) ......|^^J%
-******** and Sphinx could not patch it, perhaps because your local ...|^^J%
-******** copy is already fixed without a changed release date. .......|^^J%
-******** If not, you must update titlesec! ...........................|}}%
- \fi
- }%
- }{}
-\RequirePackage{tabulary}
-% tabulary has a bug with its re-definition of \multicolumn in its first pass
-% which is not \long. But now Sphinx does not use LaTeX's \multicolumn but its
-% own macro. Hence we don't even need to patch tabulary. See sphinxmulticell.sty
-% X or S (Sphinx) may have meanings if some table package is loaded hence
-% \X was chosen to avoid possibility of conflict
-\newcolumntype{\X}[2]{p{\dimexpr
- (\linewidth-\arrayrulewidth)*#1/#2-\tw@\tabcolsep-\arrayrulewidth\relax}}
-\newcolumntype{\Y}[1]{p{\dimexpr
- #1\dimexpr\linewidth-\arrayrulewidth\relax-\tw@\tabcolsep-\arrayrulewidth\relax}}
-% using here T (for Tabulary) feels less of a problem than the X could be
-\newcolumntype{T}{J}%
-% For tables allowing pagebreaks
-\RequirePackage{longtable}
-% User interface to set-up whitespace before and after tables:
-\newcommand*\sphinxtablepre {0pt}%
-\newcommand*\sphinxtablepost{\medskipamount}%
-% Space from caption baseline to top of table or frame of literal-block
-\newcommand*\sphinxbelowcaptionspace{.5\sphinxbaselineskip}%
-% as one can not use \baselineskip from inside longtable (it is zero there)
-% we need \sphinxbaselineskip, which defaults to \baselineskip
-\def\sphinxbaselineskip{\baselineskip}%
-% The following is to ensure that, whether tabular(y) or longtable:
-% - if a caption is on top of table:
-% a) the space between its last baseline and the top rule of table is
-% exactly \sphinxbelowcaptionspace
-% b) the space from last baseline of previous text to first baseline of
-% caption is exactly \parskip+\baselineskip+ height of a strut.
-% c) the caption text will wrap at width \LTcapwidth (4in)
-% - make sure this works also if "caption" package is loaded by user
-% (with its width or margin option taking place of \LTcapwidth role)
-% TODO: obtain same for caption of literal block: a) & c) DONE, b) TO BE DONE
-%
-% To modify space below such top caption, adjust \sphinxbelowcaptionspace
-% To add or remove space above such top caption, adjust \sphinxtablepre:
-% notice that \abovecaptionskip, \belowcaptionskip, \LTpre are **ignored**
-% A. Table with longtable
-\def\sphinxatlongtablestart
- {\par
- \vskip\parskip
- \vskip\dimexpr\sphinxtablepre\relax % adjust vertical position
- \vbox{}% get correct baseline from above
- \LTpre\z@skip\LTpost\z@skip % set to zero longtable's own skips
- \edef\sphinxbaselineskip{\dimexpr\the\dimexpr\baselineskip\relax\relax}%
- }%
-% Compatibility with caption package
-\def\sphinxthelongtablecaptionisattop{%
- \spx@ifcaptionpackage{\noalign{\vskip-\belowcaptionskip}}{}%
-}%
-% Achieves exactly \sphinxbelowcaptionspace below longtable caption
-\def\sphinxlongtablecapskipadjust
- {\dimexpr-\dp\strutbox
- -\spx@ifcaptionpackage{\abovecaptionskip}{\sphinxbaselineskip}%
- +\sphinxbelowcaptionspace\relax}%
-\def\sphinxatlongtableend{\prevdepth\z@\vskip\sphinxtablepost\relax}%
-% B. Table with tabular or tabulary
-\def\sphinxattablestart{\par\vskip\dimexpr\sphinxtablepre\relax}%
-\let\sphinxattableend\sphinxatlongtableend
-% This is used by tabular and tabulary templates
-\newcommand*\sphinxcapstartof[1]{%
- \vskip\parskip
- \vbox{}% force baselineskip for good positioning by capstart of hyperanchor
- % hyperref puts the anchor 6pt above this baseline; in case of caption
- % this baseline will be \ht\strutbox above first baseline of caption
- \def\@captype{#1}%
- \capstart
-% move back vertically, as tabular (or its caption) will compensate
- \vskip-\baselineskip\vskip-\parskip
-}%
-\def\sphinxthecaptionisattop{% locate it after \sphinxcapstartof
- \spx@ifcaptionpackage
- {\caption@setposition{t}%
- \vskip\baselineskip\vskip\parskip % undo those from \sphinxcapstartof
- \vskip-\belowcaptionskip % anticipate caption package skip
- % caption package uses a \vbox, not a \vtop, so "single line" case
- % gives different result from "multi-line" without this:
- \nointerlineskip
- }%
- {}%
-}%
-\def\sphinxthecaptionisatbottom{% (not finalized; for template usage)
- \spx@ifcaptionpackage{\caption@setposition{b}}{}%
-}%
-% The aim of \sphinxcaption is to apply to tabular(y) the maximal width
-% of caption as done by longtable
-\def\sphinxtablecapwidth{\LTcapwidth}%
-\newcommand\sphinxcaption{\@dblarg\spx@caption}%
-\long\def\spx@caption[#1]#2{%
- \noindent\hb@xt@\linewidth{\hss
- \vtop{\@tempdima\dimexpr\sphinxtablecapwidth\relax
-% don't exceed linewidth for the caption width
- \ifdim\@tempdima>\linewidth\hsize\linewidth\else\hsize\@tempdima\fi
-% longtable ignores \abovecaptionskip/\belowcaptionskip, so do the same here
- \abovecaptionskip\sphinxabovecaptionskip % \z@skip
- \belowcaptionskip\sphinxbelowcaptionskip % \z@skip
- \caption[{#1}]%
- {\strut\ignorespaces#2\ifhmode\unskip\@finalstrut\strutbox\fi}%
- }\hss}%
- \par\prevdepth\dp\strutbox
-}%
-\def\sphinxabovecaptionskip{\z@skip}% Do not use! Flagged for removal
-\def\sphinxbelowcaptionskip{\z@skip}% Do not use! Flagged for removal
-% This wrapper of \abovecaptionskip is used in sphinxVerbatim for top
-% caption, and with another value in sphinxVerbatimintable
-% TODO: To unify space above caption of a code-block with the one above
-% caption of a table/longtable, \abovecaptionskip must not be used
-% This auxiliary will get renamed and receive a different meaning
-% in future.
-\def\spx@abovecaptionskip{\abovecaptionskip}%
-% Achieve \sphinxbelowcaptionspace below a caption located above a tabular
-% or a tabulary
-\newcommand\sphinxaftertopcaption
-{%
- \spx@ifcaptionpackage
- {\par\prevdepth\dp\strutbox\nobreak\vskip-\abovecaptionskip}{\nobreak}%
- \vskip\dimexpr\sphinxbelowcaptionspace\relax
- \vskip-\baselineskip\vskip-\parskip
-}%
-% varwidth is crucial for our handling of general contents in merged cells
-\RequirePackage{varwidth}
-% but addition of a compatibility patch with hyperref is needed
-% (tested with varwidth v 0.92 Mar 2009)
-\AtBeginDocument {%
- \let\@@vwid@Hy@raisedlink\Hy@raisedlink
- \long\def\@vwid@Hy@raisedlink#1{\@vwid@wrap{\@@vwid@Hy@raisedlink{#1}}}%
- \edef\@vwid@setup{%
- \let\noexpand\Hy@raisedlink\noexpand\@vwid@Hy@raisedlink % HYPERREF !
- \unexpanded\expandafter{\@vwid@setup}}%
-}%
-% Homemade package to handle merged cells
-\RequirePackage{sphinxmulticell}
-\RequirePackage{makeidx}
-% For framing code-blocks and warning type notices, and shadowing topics
-\RequirePackage{framed}
-% The xcolor package draws better fcolorboxes around verbatim code
-\IfFileExists{xcolor.sty}{
- \RequirePackage{xcolor}
-}{
- \RequirePackage{color}
-}
-% For highlighted code.
-\RequirePackage{fancyvrb}
-\define@key{FV}{hllines}{\def\sphinx@verbatim@checkifhl##1{\in@{, ##1,}{#1}}}
-% sphinxVerbatim must be usable by third party without requiring hllines set-up
-\def\sphinxresetverbatimhllines{\def\sphinx@verbatim@checkifhl##1{\in@false}}
-\sphinxresetverbatimhllines
-% For hyperlinked footnotes in tables; also for gathering footnotes from
-% topic and warning blocks. Also to allow code-blocks in footnotes.
-\RequirePackage{footnotehyper-sphinx}
-% For the H specifier. Do not \restylefloat{figure}, it breaks Sphinx code
-% for allowing figures in tables.
-\RequirePackage{float}
-% For floating figures in the text. Better to load after float.
-\RequirePackage{wrapfig}
-% Separate paragraphs by space by default.
-\IfFileExists{parskip-2001-04-09.sty}% since September 2018 TeXLive update
-% new parskip.sty, but let it rollback to old one.
-% hopefully TeX installation not broken and LaTeX kernel not too old
- {\RequirePackage{parskip}[=v1]}
-% standard one from 1989. Admittedly \section of article/book gives possibly
-% anomalous spacing, but we can't require September 2018 release for some time.
- {\RequirePackage{parskip}}
-% For parsed-literal blocks.
-\RequirePackage{alltt}
-% Display "real" single quotes in literal blocks.
-\RequirePackage{upquote}
-% control caption around literal-block
-\RequirePackage{capt-of}
-\RequirePackage{needspace}
-% LaTeX 2018-04-01 and later provides \@removefromreset
-\ltx@ifundefined{@removefromreset}
- {\RequirePackage{remreset}}
- {}% avoid warning
-% to make pdf with correct encoded bookmarks in Japanese
-% this should precede the hyperref package
-\ifx\kanjiskip\@undefined
-% for non-Japanese: make sure bookmarks are ok also with lualatex
- \PassOptionsToPackage{pdfencoding=unicode}{hyperref}
-\else
- \RequirePackage{atbegshi}
- \ifx\ucs\@undefined
- \ifnum 42146=\euc"A4A2
- \AtBeginShipoutFirst{\special{pdf:tounicode EUC-UCS2}}
- \else
- \AtBeginShipoutFirst{\special{pdf:tounicode 90ms-RKSJ-UCS2}}
- \fi
- \else
- \AtBeginShipoutFirst{\special{pdf:tounicode UTF8-UCS2}}
- \fi
-\fi
-
-\ifx\@jsc@uplatextrue\@undefined\else
- \PassOptionsToPackage{setpagesize=false}{hyperref}
-\fi
-
-% These options can be overriden inside 'hyperref' key
-% or by later use of \hypersetup.
-\PassOptionsToPackage{colorlinks,breaklinks,%
- linkcolor=InnerLinkColor,filecolor=OuterLinkColor,%
- menucolor=OuterLinkColor,urlcolor=OuterLinkColor,%
- citecolor=InnerLinkColor}{hyperref}
-
-% stylesheet for highlighting with pygments
-\RequirePackage{sphinxhighlight}
-% fix baseline increase from Pygments latex formatter in case of error tokens
-% and keep \fboxsep's scope local via added braces
-\def\PYG@tok@err{%
- \def\PYG@bc##1{{\setlength{\fboxsep}{-\fboxrule}%
- \fcolorbox[rgb]{1.00,0.00,0.00}{1,1,1}{\strut ##1}}}%
-}
-\def\PYG@tok@cs{%
- \def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}%
- \def\PYG@bc##1{{\setlength{\fboxsep}{0pt}%
- \colorbox[rgb]{1.00,0.94,0.94}{\strut ##1}}}%
-}%
-
-
-%% OPTIONS
-%
-% Handle options via "kvoptions" (later loaded by hyperref anyhow)
-\RequirePackage{kvoptions}
-\SetupKeyvalOptions{prefix=spx@opt@} % use \spx@opt@ prefix
-
-% Sphinx legacy text layout: 1in margins on all four sides
-\ifx\@jsc@uplatextrue\@undefined
-\DeclareStringOption[1in]{hmargin}
-\DeclareStringOption[1in]{vmargin}
-\DeclareStringOption[.5in]{marginpar}
-\else
-% Japanese standard document classes handle \mag in a special way
-\DeclareStringOption[\inv@mag in]{hmargin}
-\DeclareStringOption[\inv@mag in]{vmargin}
-\DeclareStringOption[.5\dimexpr\inv@mag in\relax]{marginpar}
-\fi
-
-\DeclareStringOption[0]{maxlistdepth}% \newcommand*\spx@opt@maxlistdepth{0}
-\DeclareStringOption[-1]{numfigreset}
-\DeclareBoolOption[false]{nonumfigreset}
-\DeclareBoolOption[false]{mathnumfig}
-% \DeclareBoolOption[false]{usespart}% not used
-% dimensions, we declare the \dimen registers here.
-\newdimen\sphinxverbatimsep
-\newdimen\sphinxverbatimborder
-\newdimen\sphinxshadowsep
-\newdimen\sphinxshadowsize
-\newdimen\sphinxshadowrule
-% \DeclareStringOption is not convenient for the handling of these dimensions
-% because we want to assign the values to the corresponding registers. Even if
-% we added the code to the key handler it would be too late for the initial
-% set-up and we would need to do initial assignments explicitely. We end up
-% using \define@key directly.
-% verbatim
-\sphinxverbatimsep=\fboxsep
- \define@key{sphinx}{verbatimsep}{\sphinxverbatimsep\dimexpr #1\relax}
-\sphinxverbatimborder=\fboxrule
- \define@key{sphinx}{verbatimborder}{\sphinxverbatimborder\dimexpr #1\relax}
-% topic boxes
-\sphinxshadowsep =5pt
- \define@key{sphinx}{shadowsep}{\sphinxshadowsep\dimexpr #1\relax}
-\sphinxshadowsize=4pt
- \define@key{sphinx}{shadowsize}{\sphinxshadowsize\dimexpr #1\relax}
-\sphinxshadowrule=\fboxrule
- \define@key{sphinx}{shadowrule}{\sphinxshadowrule\dimexpr #1\relax}
-% verbatim
-\DeclareBoolOption[true]{verbatimwithframe}
-\DeclareBoolOption[true]{verbatimwrapslines}
-\DeclareBoolOption[true]{verbatimhintsturnover}
-\DeclareBoolOption[true]{inlineliteralwraps}
-\DeclareStringOption[t]{literalblockcappos}
-\DeclareStringOption[r]{verbatimcontinuedalign}
-\DeclareStringOption[r]{verbatimcontinuesalign}
-% parsed literal
-\DeclareBoolOption[true]{parsedliteralwraps}
-% \textvisiblespace for compatibility with fontspec+XeTeX/LuaTeX
-\DeclareStringOption[\textcolor{red}{\textvisiblespace}]{verbatimvisiblespace}
-\DeclareStringOption % must use braces to hide the brackets
- [{\makebox[2\fontcharwd\font`\x][r]{\textcolor{red}{\tiny$\m@th\hookrightarrow$}}}]%
- {verbatimcontinued}
-% notices/admonitions
-% the dimensions for notices/admonitions are kept as macros and assigned to
-% \spx@notice@border at time of use, hence \DeclareStringOption is ok for this
-\newdimen\spx@notice@border
-\DeclareStringOption[0.5pt]{noteborder}
-\DeclareStringOption[0.5pt]{hintborder}
-\DeclareStringOption[0.5pt]{importantborder}
-\DeclareStringOption[0.5pt]{tipborder}
-\DeclareStringOption[1pt]{warningborder}
-\DeclareStringOption[1pt]{cautionborder}
-\DeclareStringOption[1pt]{attentionborder}
-\DeclareStringOption[1pt]{dangerborder}
-\DeclareStringOption[1pt]{errorborder}
-% footnotes
-\DeclareStringOption[\mbox{ }]{AtStartFootnote}
-% we need a public macro name for direct use in latex file
-\newcommand*{\sphinxAtStartFootnote}{\spx@opt@AtStartFootnote}
-% no such need for this one, as it is used inside other macros
-\DeclareStringOption[\leavevmode\unskip]{BeforeFootnote}
-% some font styling.
-\DeclareStringOption[\sffamily\bfseries]{HeaderFamily}
-% colours
-% same problems as for dimensions: we want the key handler to use \definecolor.
-% first, some colours with no prefix, for backwards compatibility
-\newcommand*{\sphinxDeclareColorOption}[2]{%
- \definecolor{#1}#2%
- \define@key{sphinx}{#1}{\definecolor{#1}##1}%
-}%
-\sphinxDeclareColorOption{TitleColor}{{rgb}{0.126,0.263,0.361}}
-\sphinxDeclareColorOption{InnerLinkColor}{{rgb}{0.208,0.374,0.486}}
-\sphinxDeclareColorOption{OuterLinkColor}{{rgb}{0.216,0.439,0.388}}
-\sphinxDeclareColorOption{VerbatimColor}{{rgb}{1,1,1}}
-\sphinxDeclareColorOption{VerbatimBorderColor}{{rgb}{0,0,0}}
-% now the colours defined with "sphinx" prefix in their names
-\newcommand*{\sphinxDeclareSphinxColorOption}[2]{%
- % set the initial default
- \definecolor{sphinx#1}#2%
- % set the key handler. The "value" ##1 must be acceptable by \definecolor.
- \define@key{sphinx}{#1}{\definecolor{sphinx#1}##1}%
-}%
-% Default color chosen to be as in minted.sty LaTeX package!
-\sphinxDeclareSphinxColorOption{VerbatimHighlightColor}{{rgb}{0.878,1,1}}
-% admonition boxes, "light" style
-\sphinxDeclareSphinxColorOption{noteBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{hintBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{importantBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{tipBorderColor}{{rgb}{0,0,0}}
-% admonition boxes, "heavy" style
-\sphinxDeclareSphinxColorOption{warningBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{cautionBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{attentionBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{dangerBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{errorBorderColor}{{rgb}{0,0,0}}
-\sphinxDeclareSphinxColorOption{warningBgColor}{{rgb}{1,1,1}}
-\sphinxDeclareSphinxColorOption{cautionBgColor}{{rgb}{1,1,1}}
-\sphinxDeclareSphinxColorOption{attentionBgColor}{{rgb}{1,1,1}}
-\sphinxDeclareSphinxColorOption{dangerBgColor}{{rgb}{1,1,1}}
-\sphinxDeclareSphinxColorOption{errorBgColor}{{rgb}{1,1,1}}
-
-\DeclareDefaultOption{\@unknownoptionerror}
-\ProcessKeyvalOptions*
-% don't allow use of maxlistdepth via \sphinxsetup.
-\DisableKeyvalOption{sphinx}{maxlistdepth}
-\DisableKeyvalOption{sphinx}{numfigreset}
-\DisableKeyvalOption{sphinx}{nonumfigreset}
-\DisableKeyvalOption{sphinx}{mathnumfig}
-% user interface: options can be changed midway in a document!
-\newcommand\sphinxsetup[1]{\setkeys{sphinx}{#1}}
-
-
-%% MAXLISTDEPTH
-%
-% remove LaTeX's cap on nesting depth if 'maxlistdepth' key used.
-% This is a hack, which works with the standard classes: it assumes \@toodeep
-% is always used in "true" branches: "\if ... \@toodeep \else .. \fi."
-
-% will force use the "false" branch (if there is one)
-\def\spx@toodeep@hack{\fi\iffalse}
-
-% do nothing if 'maxlistdepth' key not used or if package enumitem loaded.
-\ifnum\spx@opt@maxlistdepth=\z@\expandafter\@gobbletwo\fi
-\AtBeginDocument{%
-\@ifpackageloaded{enumitem}{\remove@to@nnil}{}%
- \let\spx@toodeepORI\@toodeep
- \def\@toodeep{%
- \ifnum\@listdepth<\spx@opt@maxlistdepth\relax
- \expandafter\spx@toodeep@hack
- \else
- \expandafter\spx@toodeepORI
- \fi}%
-% define all missing \@list... macros
- \count@\@ne
- \loop
- \ltx@ifundefined{@list\romannumeral\the\count@}
- {\iffalse}{\iftrue\advance\count@\@ne}%
- \repeat
- \loop
- \ifnum\count@>\spx@opt@maxlistdepth\relax\else
- \expandafter\let
- \csname @list\romannumeral\the\count@\expandafter\endcsname
- \csname @list\romannumeral\the\numexpr\count@-\@ne\endcsname
- % workaround 2.6--3.2d babel-french issue (fixed in 3.2e; no change needed)
- \ltx@ifundefined{leftmargin\romannumeral\the\count@}
- {\expandafter\let
- \csname leftmargin\romannumeral\the\count@\expandafter\endcsname
- \csname leftmargin\romannumeral\the\numexpr\count@-\@ne\endcsname}{}%
- \advance\count@\@ne
- \repeat
-% define all missing enum... counters and \labelenum... macros and \p@enum..
- \count@\@ne
- \loop
- \ltx@ifundefined{c@enum\romannumeral\the\count@}
- {\iffalse}{\iftrue\advance\count@\@ne}%
- \repeat
- \loop
- \ifnum\count@>\spx@opt@maxlistdepth\relax\else
- \newcounter{enum\romannumeral\the\count@}%
- \expandafter\def
- \csname labelenum\romannumeral\the\count@\expandafter\endcsname
- \expandafter
- {\csname theenum\romannumeral\the\numexpr\count@\endcsname.}%
- \expandafter\def
- \csname p@enum\romannumeral\the\count@\expandafter\endcsname
- \expandafter
- {\csname p@enum\romannumeral\the\numexpr\count@-\@ne\expandafter
- \endcsname\csname theenum\romannumeral\the\numexpr\count@-\@ne\endcsname.}%
- \advance\count@\@ne
- \repeat
-% define all missing labelitem... macros
- \count@\@ne
- \loop
- \ltx@ifundefined{labelitem\romannumeral\the\count@}
- {\iffalse}{\iftrue\advance\count@\@ne}%
- \repeat
- \loop
- \ifnum\count@>\spx@opt@maxlistdepth\relax\else
- \expandafter\let
- \csname labelitem\romannumeral\the\count@\expandafter\endcsname
- \csname labelitem\romannumeral\the\numexpr\count@-\@ne\endcsname
- \advance\count@\@ne
- \repeat
- \PackageInfo{sphinx}{maximal list depth extended to \spx@opt@maxlistdepth}%
-\@gobble\@nnil
-}
-
-
-%% INDEX, BIBLIOGRAPHY, APPENDIX, TABLE OF CONTENTS
-%
-% fix the double index and bibliography on the table of contents
-% in jsclasses (Japanese standard document classes)
-\ifx\@jsc@uplatextrue\@undefined\else
- \renewenvironment{sphinxtheindex}
- {\cleardoublepage\phantomsection
- \begin{theindex}}
- {\end{theindex}}
-
- \renewenvironment{sphinxthebibliography}[1]
- {\cleardoublepage% \phantomsection % not needed here since TeXLive 2010's hyperref
- \begin{thebibliography}{#1}}
- {\end{thebibliography}}
-\fi
-
-% disable \@chappos in Appendix in pTeX
-\ifx\kanjiskip\@undefined\else
- \let\py@OldAppendix=\appendix
- \renewcommand{\appendix}{
- \py@OldAppendix
- \gdef\@chappos{}
- }
-\fi
-
-% make commands known to non-Sphinx document classes
-\providecommand*{\sphinxtableofcontents}{\tableofcontents}
-\ltx@ifundefined{sphinxthebibliography}
- {\newenvironment
- {sphinxthebibliography}{\begin{thebibliography}}{\end{thebibliography}}%
- }
- {}% else clause of \ltx@ifundefined
-\ltx@ifundefined{sphinxtheindex}
- {\newenvironment{sphinxtheindex}{\begin{theindex}}{\end{theindex}}}%
- {}% else clause of \ltx@ifundefined
-
-% for usage with xindy: this string gets internationalized in preamble
-\newcommand*{\sphinxnonalphabeticalgroupname}{}
-% redefined in preamble, headings for makeindex produced index
-\newcommand*{\sphinxsymbolsname}{}
-\newcommand*{\sphinxnumbersname}{}
-
-%% COLOR (general)
-%
-% FIXME: \normalcolor should probably be used in place of \py@NormalColor
-% elsewhere, and \py@NormalColor should never be defined. \normalcolor
-% switches to the colour from last \color call in preamble.
-\def\py@NormalColor{\color{black}}
-% FIXME: it is probably better to use \color{TitleColor}, as TitleColor
-% can be customized from 'sphinxsetup', and drop usage of \py@TitleColor
-\def\py@TitleColor{\color{TitleColor}}
-% FIXME: this line should be dropped, as "9" is default anyhow.
-\ifdefined\pdfcompresslevel\pdfcompresslevel = 9 \fi
-
-
-%% PAGE STYLING
-%
-% Style parameters and macros used by most documents here
-\raggedbottom
-\sloppy
-\hbadness = 5000 % don't print trivial gripes
-
-% Use \pagestyle{normal} as the primary pagestyle for text.
-% Redefine the 'normal' header/footer style when using "fancyhdr" package:
-\@ifpackageloaded{fancyhdr}{%
- \ltx@ifundefined{c@chapter}
- {% no \chapter, "howto" (non-Japanese) docclass
- \fancypagestyle{plain}{
- \fancyhf{}
- \fancyfoot[C]{{\py@HeaderFamily\thepage}}
- \renewcommand{\headrulewidth}{0pt}
- \renewcommand{\footrulewidth}{0pt}
- }
- % Same as 'plain', this way we can use it in template
- % FIXME: shouldn't this have a running header with Name and Release like 'manual'?
- \fancypagestyle{normal}{
- \fancyhf{}
- \fancyfoot[C]{{\py@HeaderFamily\thepage}}
- \renewcommand{\headrulewidth}{0pt}
- \renewcommand{\footrulewidth}{0pt}
- }
- }%
- {% classes with \chapter command
- \fancypagestyle{normal}{
- \fancyhf{}
- % FIXME: this presupposes "twoside".
- % If "oneside" class option, there are warnings in LaTeX log.
- \fancyfoot[LE,RO]{{\py@HeaderFamily\thepage}}
- \fancyfoot[LO]{{\py@HeaderFamily\nouppercase{\rightmark}}}
- \fancyfoot[RE]{{\py@HeaderFamily\nouppercase{\leftmark}}}
- \fancyhead[LE,RO]{{\py@HeaderFamily \@title\sphinxheadercomma\py@release}}
- \renewcommand{\headrulewidth}{0.4pt}
- \renewcommand{\footrulewidth}{0.4pt}
- % define chaptermark with \@chappos when \@chappos is available for Japanese
- \ltx@ifundefined{@chappos}{}
- {\def\chaptermark##1{\markboth{\@chapapp\space\thechapter\space\@chappos\space ##1}{}}}
- }
- % Update the plain style so we get the page number & footer line,
- % but not a chapter or section title. This is to keep the first
- % page of a chapter `clean.'
- \fancypagestyle{plain}{
- \fancyhf{}
- \fancyfoot[LE,RO]{{\py@HeaderFamily\thepage}}
- \renewcommand{\headrulewidth}{0pt}
- \renewcommand{\footrulewidth}{0.4pt}
- }
- }
- }
- {% no fancyhdr: memoir class
- % Provide default for 'normal' style simply as an alias of 'plain' style
- % This way we can use \pagestyle{normal} in LaTeX template
- \def\ps@normal{\ps@plain}
- % Users of memoir class are invited to redefine 'normal' style in preamble
- }
-
-% geometry
-\ifx\kanjiskip\@undefined
- \PassOptionsToPackage{%
- hmargin={\unexpanded{\spx@opt@hmargin}},%
- vmargin={\unexpanded{\spx@opt@vmargin}},%
- marginpar=\unexpanded{\spx@opt@marginpar}}
- {geometry}
-\else
- % set text width for Japanese documents to be integer multiple of 1zw
- % and text height to be integer multiple of \baselineskip
- % the execution is delayed to \sphinxsetup then geometry.sty
- \normalsize\normalfont
- \newcommand*\sphinxtextwidthja[1]{%
- \if@twocolumn\tw@\fi
- \dimexpr
- \numexpr\dimexpr\paperwidth-\tw@\dimexpr#1\relax\relax/
- \dimexpr\if@twocolumn\tw@\else\@ne\fi zw\relax
- zw\relax}%
- \newcommand*\sphinxmarginparwidthja[1]{%
- \dimexpr\numexpr\dimexpr#1\relax/\dimexpr1zw\relax zw\relax}%
- \newcommand*\sphinxtextlinesja[1]{%
- \numexpr\@ne+\dimexpr\paperheight-\topskip-\tw@\dimexpr#1\relax\relax/
- \baselineskip\relax}%
- \ifx\@jsc@uplatextrue\@undefined\else
- % the way we found in order for the papersize special written by
- % geometry in the dvi file to be correct in case of jsbook class
- \ifnum\mag=\@m\else % do nothing special if nomag class option or 10pt
- \PassOptionsToPackage{truedimen}{geometry}%
- \fi
- \fi
- \PassOptionsToPackage{%
- hmarginratio={1:1},%
- textwidth=\unexpanded{\sphinxtextwidthja{\spx@opt@hmargin}},%
- vmarginratio={1:1},%
- lines=\unexpanded{\sphinxtextlinesja{\spx@opt@vmargin}},%
- marginpar=\unexpanded{\sphinxmarginparwidthja{\spx@opt@marginpar}},%
- footskip=2\baselineskip,%
- }{geometry}%
- \AtBeginDocument
- {% update a dimension used by the jsclasses
- \ifx\@jsc@uplatextrue\@undefined\else\fullwidth\textwidth\fi
- % for some reason, jreport normalizes all dimensions with \@settopoint
- \@ifclassloaded{jreport}
- {\@settopoint\textwidth\@settopoint\textheight\@settopoint\marginparwidth}
- {}% <-- "false" clause of \@ifclassloaded
- }%
-\fi
-
-% fix fncychap's bug which uses prematurely the \textwidth value
-\@ifpackagewith{fncychap}{Bjornstrup}
- {\AtBeginDocument{\mylen\textwidth\advance\mylen-2\myhi}}%
- {}% <-- "false" clause of \@ifpackagewith
-
-
-%% TITLES
-%
-% Since Sphinx 1.5, users should use HeaderFamily key to 'sphinxsetup' rather
-% than defining their own \py@HeaderFamily command (which is still possible).
-% Memo: \py@HeaderFamily is also used by \maketitle as defined in
-% sphinxmanual.cls/sphinxhowto.cls
-\newcommand{\py@HeaderFamily}{\spx@opt@HeaderFamily}
-
-% This sets up the fancy chapter headings that make the documents look
-% at least a little better than the usual LaTeX output.
-\@ifpackagewith{fncychap}{Bjarne}{
- \ChNameVar {\raggedleft\normalsize \py@HeaderFamily}
- \ChNumVar {\raggedleft\Large \py@HeaderFamily}
- \ChTitleVar{\raggedleft\Large \py@HeaderFamily}
- % This creates (numbered) chapter heads without the leading \vspace*{}:
- \def\@makechapterhead#1{%
- {\parindent \z@ \raggedright \normalfont
- \ifnum \c@secnumdepth >\m@ne
- \if@mainmatter
- \DOCH
- \fi
- \fi
- \interlinepenalty\@M
- \if@mainmatter
- \DOTI{#1}%
- \else%
- \DOTIS{#1}%
- \fi
- }}
-}{}% <-- "false" clause of \@ifpackagewith
-
-% Augment the sectioning commands used to get our own font family in place,
-% and reset some internal data items (\titleformat from titlesec package)
-\titleformat{\section}{\Large\py@HeaderFamily}%
- {\py@TitleColor\thesection}{0.5em}{\py@TitleColor}{\py@NormalColor}
-\titleformat{\subsection}{\large\py@HeaderFamily}%
- {\py@TitleColor\thesubsection}{0.5em}{\py@TitleColor}{\py@NormalColor}
-\titleformat{\subsubsection}{\py@HeaderFamily}%
- {\py@TitleColor\thesubsubsection}{0.5em}{\py@TitleColor}{\py@NormalColor}
-% By default paragraphs (and subsubsections) will not be numbered because
-% sphinxmanual.cls and sphinxhowto.cls set secnumdepth to 2
-\titleformat{\paragraph}{\py@HeaderFamily}%
- {\py@TitleColor\theparagraph}{0.5em}{\py@TitleColor}{\py@NormalColor}
-\titleformat{\subparagraph}{\py@HeaderFamily}%
- {\py@TitleColor\thesubparagraph}{0.5em}{\py@TitleColor}{\py@NormalColor}
-
-
-%% GRAPHICS
-%
-% \sphinxincludegraphics defined to resize images larger than the line width,
-% except if height or width option present.
-%
-% If scale is present, rescale before fitting to line width. (since 1.5)
-\newbox\spx@image@box
-\newcommand*{\sphinxincludegraphics}[2][]{%
- \in@{height}{#1}\ifin@\else\in@{width}{#1}\fi
- \ifin@ % height or width present
- \includegraphics[#1]{#2}%
- \else % no height nor width (but #1 may be "scale=...")
- \setbox\spx@image@box\hbox{\includegraphics[#1,draft]{#2}}%
- \ifdim \wd\spx@image@box>\linewidth
- \setbox\spx@image@box\box\voidb@x % clear memory
- \includegraphics[#1,width=\linewidth]{#2}%
- \else
- \setbox\spx@image@box\box\voidb@x % clear memory
- \includegraphics[#1]{#2}%
- \fi
- \fi
-}
-% \sphinxsafeincludegraphics resizes images larger than the line width,
-% or taller than about the text height (whether or not height/width options
-% were used). This is requested to avoid a crash with \MakeFramed as used by
-% sphinxShadowBox (topic/contents) and sphinxheavybox (admonitions), and also
-% by sphinxVerbatim (but a priori no image inclusion there).
-\newdimen\spx@image@maxheight
-% default maximal setting will get reduced by sphinxShadowBox/sphinxheavybox
-\AtBeginDocument{\spx@image@maxheight\textheight}
-\newcommand*{\sphinxsafeincludegraphics}[2][]{%
- \gdef\spx@includegraphics@options{#1}%
- \setbox\spx@image@box\hbox{\includegraphics[#1,draft]{#2}}%
- \in@false
- \ifdim \wd\spx@image@box>\linewidth
- \g@addto@macro\spx@includegraphics@options{,width=\linewidth}%
- \in@true
- \fi
- % no rotation, no need to worry about depth
- \ifdim \ht\spx@image@box>\spx@image@maxheight
- \g@addto@macro\spx@includegraphics@options{,height=\spx@image@maxheight}%
- \in@true
- \fi
- \ifin@
- \g@addto@macro\spx@includegraphics@options{,keepaspectratio}%
- \fi
- \setbox\spx@image@box\box\voidb@x % clear memory
- \expandafter\includegraphics\expandafter[\spx@includegraphics@options]{#2}%
-}%
-
-
-%% FIGURE IN TABLE
-%
-\newenvironment{sphinxfigure-in-table}[1][\linewidth]{%
- \def\@captype{figure}%
- \sphinxsetvskipsforfigintablecaption
- \begin{minipage}{#1}%
-}{\end{minipage}}
-% store the original \caption macro for usage with figures inside longtable
-% and tabulary cells. Make sure we get the final \caption in presence of
-% caption package, whether the latter was loaded before or after sphinx.
-\AtBeginDocument{%
- \let\spx@originalcaption\caption
- \@ifpackageloaded{caption}
- {\let\spx@ifcaptionpackage\@firstoftwo
- \caption@AtBeginDocument*{\let\spx@originalcaption\caption}%
-% in presence of caption package, drop our own \sphinxcaption whose aim was to
-% ensure same width of caption to all kinds of tables (tabular(y), longtable),
-% because caption package has its own width (or margin) option
- \def\sphinxcaption{\caption}%
- }%
- {\let\spx@ifcaptionpackage\@secondoftwo}%
-}
-% tabulary expands twice contents, we need to prevent double counter stepping
-\newcommand*\sphinxfigcaption
- {\ifx\equation$%$% this is trick to identify tabulary first pass
- \firstchoice@false\else\firstchoice@true\fi
- \spx@originalcaption }
-\newcommand*\sphinxsetvskipsforfigintablecaption
- {\abovecaptionskip\smallskipamount
- \belowcaptionskip\smallskipamount}
-
-
-%% CITATIONS
-%
-\protected\def\sphinxcite{\cite}
-
-%% FOOTNOTES
-%
-% Support large numbered footnotes in minipage
-% But now obsolete due to systematic use of \savenotes/\spewnotes
-% when minipages are in use in the various macro definitions next.
-\def\thempfootnote{\arabic{mpfootnote}}
-
-
-%% NUMBERING OF FIGURES, TABLES, AND LITERAL BLOCKS
-\ltx@ifundefined{c@chapter}
- {\newcounter{literalblock}}%
- {\newcounter{literalblock}[chapter]%
- \def\theliteralblock{\ifnum\c@chapter>\z@\arabic{chapter}.\fi
- \arabic{literalblock}}%
- }%
-\ifspx@opt@nonumfigreset
- \ltx@ifundefined{c@chapter}{}{%
- \@removefromreset{figure}{chapter}%
- \@removefromreset{table}{chapter}%
- \@removefromreset{literalblock}{chapter}%
- \ifspx@opt@mathnumfig
- \@removefromreset{equation}{chapter}%
- \fi
- }%
- \def\thefigure{\arabic{figure}}%
- \def\thetable {\arabic{table}}%
- \def\theliteralblock{\arabic{literalblock}}%
- \ifspx@opt@mathnumfig
- \def\theequation{\arabic{equation}}%
- \fi
-\else
-\let\spx@preAthefigure\@empty
-\let\spx@preBthefigure\@empty
-% \ifspx@opt@usespart % <-- LaTeX writer could pass such a 'usespart' boolean
-% % as sphinx.sty package option
-% If document uses \part, (triggered in Sphinx by latex_toplevel_sectioning)
-% LaTeX core per default does not reset chapter or section
-% counters at each part.
-% But if we modify this, we need to redefine \thechapter, \thesection to
-% include the part number and this will cause problems in table of contents
-% because of too wide numbering. Simplest is to do nothing.
-% \fi
-\ifnum\spx@opt@numfigreset>0
- \ltx@ifundefined{c@chapter}
- {}
- {\g@addto@macro\spx@preAthefigure{\ifnum\c@chapter>\z@\arabic{chapter}.}%
- \g@addto@macro\spx@preBthefigure{\fi}}%
-\fi
-\ifnum\spx@opt@numfigreset>1
- \@addtoreset{figure}{section}%
- \@addtoreset{table}{section}%
- \@addtoreset{literalblock}{section}%
- \ifspx@opt@mathnumfig
- \@addtoreset{equation}{section}%
- \fi
- \g@addto@macro\spx@preAthefigure{\ifnum\c@section>\z@\arabic{section}.}%
- \g@addto@macro\spx@preBthefigure{\fi}%
-\fi
-\ifnum\spx@opt@numfigreset>2
- \@addtoreset{figure}{subsection}%
- \@addtoreset{table}{subsection}%
- \@addtoreset{literalblock}{subsection}%
- \ifspx@opt@mathnumfig
- \@addtoreset{equation}{subsection}%
- \fi
- \g@addto@macro\spx@preAthefigure{\ifnum\c@subsection>\z@\arabic{subsection}.}%
- \g@addto@macro\spx@preBthefigure{\fi}%
-\fi
-\ifnum\spx@opt@numfigreset>3
- \@addtoreset{figure}{subsubsection}%
- \@addtoreset{table}{subsubsection}%
- \@addtoreset{literalblock}{subsubsection}%
- \ifspx@opt@mathnumfig
- \@addtoreset{equation}{subsubsection}%
- \fi
- \g@addto@macro\spx@preAthefigure{\ifnum\c@subsubsection>\z@\arabic{subsubsection}.}%
- \g@addto@macro\spx@preBthefigure{\fi}%
-\fi
-\ifnum\spx@opt@numfigreset>4
- \@addtoreset{figure}{paragraph}%
- \@addtoreset{table}{paragraph}%
- \@addtoreset{literalblock}{paragraph}%
- \ifspx@opt@mathnumfig
- \@addtoreset{equation}{paragraph}%
- \fi
- \g@addto@macro\spx@preAthefigure{\ifnum\c@subparagraph>\z@\arabic{subparagraph}.}%
- \g@addto@macro\spx@preBthefigure{\fi}%
-\fi
-\ifnum\spx@opt@numfigreset>5
- \@addtoreset{figure}{subparagraph}%
- \@addtoreset{table}{subparagraph}%
- \@addtoreset{literalblock}{subparagraph}%
- \ifspx@opt@mathnumfig
- \@addtoreset{equation}{subparagraph}%
- \fi
- \g@addto@macro\spx@preAthefigure{\ifnum\c@subsubparagraph>\z@\arabic{subsubparagraph}.}%
- \g@addto@macro\spx@preBthefigure{\fi}%
-\fi
-\expandafter\g@addto@macro
-\expandafter\spx@preAthefigure\expandafter{\spx@preBthefigure}%
-\let\thefigure\spx@preAthefigure
-\let\thetable\spx@preAthefigure
-\let\theliteralblock\spx@preAthefigure
-\g@addto@macro\thefigure{\arabic{figure}}%
-\g@addto@macro\thetable{\arabic{table}}%
-\g@addto@macro\theliteralblock{\arabic{literalblock}}%
- \ifspx@opt@mathnumfig
- \let\theequation\spx@preAthefigure
- \g@addto@macro\theequation{\arabic{equation}}%
- \fi
-\fi
-
-
-%% LITERAL BLOCKS
-%
-% Based on use of "fancyvrb.sty"'s Verbatim.
-% - with framing allowing page breaks ("framed.sty")
-% - with breaking of long lines (exploits Pygments mark-up),
-% - with possibly of a top caption, non-separable by pagebreak.
-% - and usable inside tables or footnotes ("footnotehyper-sphinx").
-
-% For extensions which use \OriginalVerbatim and compatibility with Sphinx <
-% 1.5, we define and use these when (unmodified) Verbatim will be needed. But
-% Sphinx >= 1.5 does not modify the \Verbatim macro anymore.
-\let\OriginalVerbatim \Verbatim
-\let\endOriginalVerbatim\endVerbatim
-
-% for captions of literal blocks
-% at start of caption title
-\newcommand*{\fnum@literalblock}{\literalblockname\nobreakspace\theliteralblock}
-% this will be overwritten in document preamble by Babel translation
-\newcommand*{\literalblockname}{Listing }
-% file extension needed for \caption's good functioning, the file is created
-% only if a \listof{literalblock}{foo} command is encountered, which is
-% analogous to \listoffigures, but for the code listings (foo = chosen title.)
-\newcommand*{\ext@literalblock}{lol}
-
-\newif\ifspx@inframed % flag set if we are already in a framed environment
-% if forced use of minipage encapsulation is needed (e.g. table cells)
-\newif\ifsphinxverbatimwithminipage \sphinxverbatimwithminipagefalse
-
-% Framing macro for use with framed.sty's \FrameCommand
-% - it obeys current indentation,
-% - frame is \fboxsep separated from the contents,
-% - the contents use the full available text width,
-% - #1 = color of frame, #2 = color of background,
-% - #3 = above frame, #4 = below frame, #5 = within frame,
-% - #3 and #4 must be already typeset boxes; they must issue \normalcolor
-% or similar, else, they are under scope of color #1
-\long\def\spx@fcolorbox #1#2#3#4#5{%
- \hskip\@totalleftmargin
- \hskip-\fboxsep\hskip-\fboxrule
- % use of \color@b@x here is compatible with both xcolor.sty and color.sty
- \color@b@x {\color{#1}\spx@CustomFBox{#3}{#4}}{\color{#2}}{#5}%
- \hskip-\fboxsep\hskip-\fboxrule
- \hskip-\linewidth \hskip-\@totalleftmargin \hskip\columnwidth
-}%
-% #1 = for material above frame, such as a caption or a "continued" hint
-% #2 = for material below frame, such as a caption or "continues on next page"
-% #3 = actual contents, which will be typeset with a background color
-\long\def\spx@CustomFBox#1#2#3{%
- \begingroup
- \setbox\@tempboxa\hbox{{#3}}% inner braces to avoid color leaks
- \vbox{#1% above frame
- % draw frame border _latest_ to avoid pdf viewer issue
- \kern\fboxrule
- \hbox{\kern\fboxrule
- \copy\@tempboxa
- \kern-\wd\@tempboxa\kern-\fboxrule
- \vrule\@width\fboxrule
- \kern\wd\@tempboxa
- \vrule\@width\fboxrule}%
- \kern-\dimexpr\ht\@tempboxa+\dp\@tempboxa+\fboxrule\relax
- \hrule\@height\fboxrule
- \kern\dimexpr\ht\@tempboxa+\dp\@tempboxa\relax
- \hrule\@height\fboxrule
- #2% below frame
- }%
- \endgroup
-}%
-\def\spx@fcolorbox@put@c#1{% hide width from framed.sty measuring
- \moveright\dimexpr\fboxrule+.5\wd\@tempboxa\hb@xt@\z@{\hss#1\hss}%
-}%
-\def\spx@fcolorbox@put@r#1{% right align with contents, width hidden
- \moveright\dimexpr\fboxrule+\wd\@tempboxa-\fboxsep\hb@xt@\z@{\hss#1}%
-}%
-\def\spx@fcolorbox@put@l#1{% left align with contents, width hidden
- \moveright\dimexpr\fboxrule+\fboxsep\hb@xt@\z@{#1\hss}%
-}%
-%
-\def\sphinxVerbatim@Continued
- {\csname spx@fcolorbox@put@\spx@opt@verbatimcontinuedalign\endcsname
- {\normalcolor\sphinxstylecodecontinued\literalblockcontinuedname}}%
-\def\sphinxVerbatim@Continues
- {\csname spx@fcolorbox@put@\spx@opt@verbatimcontinuesalign\endcsname
- {\normalcolor\sphinxstylecodecontinues\literalblockcontinuesname}}%
-\def\sphinxVerbatim@Title
- {\spx@fcolorbox@put@c{\unhcopy\sphinxVerbatim@TitleBox}}%
-\let\sphinxVerbatim@Before\@empty
-\let\sphinxVerbatim@After\@empty
-% Defaults are redefined in document preamble according to language
-\newcommand*\literalblockcontinuedname{continued from previous page}%
-\newcommand*\literalblockcontinuesname{continues on next page}%
-%
-\def\spx@verbatimfcolorbox{\spx@fcolorbox{VerbatimBorderColor}{VerbatimColor}}%
-\def\sphinxVerbatim@FrameCommand
- {\spx@verbatimfcolorbox\sphinxVerbatim@Before\sphinxVerbatim@After}%
-\def\sphinxVerbatim@FirstFrameCommand
- {\spx@verbatimfcolorbox\sphinxVerbatim@Before\sphinxVerbatim@Continues}%
-\def\sphinxVerbatim@MidFrameCommand
- {\spx@verbatimfcolorbox\sphinxVerbatim@Continued\sphinxVerbatim@Continues}%
-\def\sphinxVerbatim@LastFrameCommand
- {\spx@verbatimfcolorbox\sphinxVerbatim@Continued\sphinxVerbatim@After}%
-
-% For linebreaks inside Verbatim environment from package fancyvrb.
-\newbox\sphinxcontinuationbox
-\newbox\sphinxvisiblespacebox
-\newcommand*\sphinxafterbreak {\copy\sphinxcontinuationbox}
-
-% Take advantage of the already applied Pygments mark-up to insert
-% potential linebreaks for TeX processing.
-% {, <, #, %, $, ' and ": go to next line.
-% _, }, ^, &, >, - and ~: stay at end of broken line.
-% Use of \textquotesingle for straight quote.
-% FIXME: convert this to package options ?
-\newcommand*\sphinxbreaksbeforelist {%
- \do\PYGZob\{\do\PYGZlt\<\do\PYGZsh\#\do\PYGZpc\%% {, <, #, %,
- \do\PYGZdl\$\do\PYGZdq\"% $, "
- \def\PYGZsq
- {\discretionary{}{\sphinxafterbreak\textquotesingle}{\textquotesingle}}% '
-}
-\newcommand*\sphinxbreaksafterlist {%
- \do\PYGZus\_\do\PYGZcb\}\do\PYGZca\^\do\PYGZam\&% _, }, ^, &,
- \do\PYGZgt\>\do\PYGZhy\-\do\PYGZti\~% >, -, ~
-}
-\newcommand*\sphinxbreaksatspecials {%
- \def\do##1##2%
- {\def##1{\discretionary{}{\sphinxafterbreak\char`##2}{\char`##2}}}%
- \sphinxbreaksbeforelist
- \def\do##1##2%
- {\def##1{\discretionary{\char`##2}{\sphinxafterbreak}{\char`##2}}}%
- \sphinxbreaksafterlist
-}
-
-\def\sphinx@verbatim@nolig@list {\do \`}%
-% Some characters . , ; ? ! / are not pygmentized.
-% This macro makes them "active" and they will insert potential linebreaks.
-% Not compatible with math mode (cf \sphinxunactivateextras).
-\newcommand*\sphinxbreaksbeforeactivelist {}% none
-\newcommand*\sphinxbreaksafteractivelist {\do\.\do\,\do\;\do\?\do\!\do\/}
-\newcommand*\sphinxbreaksviaactive {%
- \def\do##1{\lccode`\~`##1%
- \lowercase{\def~}{\discretionary{}{\sphinxafterbreak\char`##1}{\char`##1}}%
- \catcode`##1\active}%
- \sphinxbreaksbeforeactivelist
- \def\do##1{\lccode`\~`##1%
- \lowercase{\def~}{\discretionary{\char`##1}{\sphinxafterbreak}{\char`##1}}%
- \catcode`##1\active}%
- \sphinxbreaksafteractivelist
- \lccode`\~`\~
-}
-
-% If the linebreak is at a space, the latter will be displayed as visible
-% space at end of first line, and a continuation symbol starts next line.
-\def\spx@verbatim@space {%
- \nobreak\hskip\z@skip
- \discretionary{\copy\sphinxvisiblespacebox}{\sphinxafterbreak}
- {\kern\fontdimen2\font}%
-}%
-
-% if the available space on page is less than \literalblockneedspace, insert pagebreak
-\newcommand{\sphinxliteralblockneedspace}{5\baselineskip}
-\newcommand{\sphinxliteralblockwithoutcaptionneedspace}{1.5\baselineskip}
-% The title (caption) is specified from outside as macro \sphinxVerbatimTitle.
-% \sphinxVerbatimTitle is reset to empty after each use of Verbatim.
-\newcommand*\sphinxVerbatimTitle {}
-% This box to typeset the caption before framed.sty multiple passes for framing.
-\newbox\sphinxVerbatim@TitleBox
-% This is a workaround to a "feature" of French lists, when literal block
-% follows immediately; usable generally (does only \par then), a priori...
-\newcommand*\sphinxvspacefixafterfrenchlists{%
- \ifvmode\ifdim\lastskip<\z@ \vskip\parskip\fi\else\par\fi
-}
-% Holder macro for labels of literal blocks. Set-up by LaTeX writer.
-\newcommand*\sphinxLiteralBlockLabel {}
-\newcommand*\sphinxSetupCaptionForVerbatim [1]
-{%
- \sphinxvspacefixafterfrenchlists
- \needspace{\sphinxliteralblockneedspace}%
-% insert a \label via \sphinxLiteralBlockLabel
-% reset to normal the color for the literal block caption
- \def\sphinxVerbatimTitle
- {\py@NormalColor\sphinxcaption{\sphinxLiteralBlockLabel #1}}%
-}
-\newcommand*\sphinxSetupCodeBlockInFootnote {%
- \fvset{fontsize=\footnotesize}\let\caption\sphinxfigcaption
- \sphinxverbatimwithminipagetrue % reduces vertical spaces
- % we counteract (this is in a group) the \@normalsize from \caption
- \let\normalsize\footnotesize\let\@parboxrestore\relax
- \def\spx@abovecaptionskip{\sphinxverbatimsmallskipamount}%
-}
-% needed to create wrapper environments of fancyvrb's Verbatim
-\newcommand*{\sphinxVerbatimEnvironment}{\gdef\FV@EnvironName{sphinxVerbatim}}
-\newcommand*{\sphinxverbatimsmallskipamount}{\smallskipamount}
-% serves to implement line highlighting and line wrapping
-\newcommand\sphinxFancyVerbFormatLine[1]{%
- \expandafter\sphinx@verbatim@checkifhl\expandafter{\the\FV@CodeLineNo}%
- \ifin@
- \sphinxVerbatimHighlightLine{#1}%
- \else
- \sphinxVerbatimFormatLine{#1}%
- \fi
-}%
-\newcommand\sphinxVerbatimHighlightLine[1]{%
- \edef\sphinxrestorefboxsep{\fboxsep\the\fboxsep\relax}%
- \fboxsep0pt\relax % cf LaTeX bug graphics/4524
- \colorbox{sphinxVerbatimHighlightColor}%
- {\sphinxrestorefboxsep\sphinxVerbatimFormatLine{#1}}%
- % no need to restore \fboxsep here, as this ends up in a \hbox from fancyvrb
-}%
-% \sphinxVerbatimFormatLine will be set locally to one of those two:
-\newcommand\sphinxVerbatimFormatLineWrap[1]{%
- \hsize\linewidth
- \vtop{\raggedright\hyphenpenalty\z@\exhyphenpenalty\z@
- \doublehyphendemerits\z@\finalhyphendemerits\z@
- \strut #1\strut}%
-}%
-\newcommand\sphinxVerbatimFormatLineNoWrap[1]{\hb@xt@\linewidth{\strut #1\hss}}%
-\g@addto@macro\FV@SetupFont{%
- \sbox\sphinxcontinuationbox {\spx@opt@verbatimcontinued}%
- \sbox\sphinxvisiblespacebox {\spx@opt@verbatimvisiblespace}%
-}%
-\newenvironment{sphinxVerbatim}{%
- % first, let's check if there is a caption
- \ifx\sphinxVerbatimTitle\empty
- \sphinxvspacefixafterfrenchlists
- \parskip\z@skip
- \vskip\sphinxverbatimsmallskipamount
- % there was no caption. Check if nevertheless a label was set.
- \ifx\sphinxLiteralBlockLabel\empty\else
- % we require some space to be sure hyperlink target from \phantomsection
- % will not be separated from upcoming verbatim by a page break
- \needspace{\sphinxliteralblockwithoutcaptionneedspace}%
- \phantomsection\sphinxLiteralBlockLabel
- \fi
- \else
- \parskip\z@skip
- \if t\spx@opt@literalblockcappos
- \vskip\spx@abovecaptionskip
- \def\sphinxVerbatim@Before
- {\sphinxVerbatim@Title\nointerlineskip
- \kern\dimexpr-\dp\strutbox+\sphinxbelowcaptionspace
- % if no frame (code-blocks inside table cells), remove
- % the "verbatimsep" whitespace from the top (better visually)
- \ifspx@opt@verbatimwithframe\else-\sphinxverbatimsep\fi
- % caption package adds \abovecaptionskip vspace, remove it
- \spx@ifcaptionpackage{-\abovecaptionskip}{}\relax}%
- \else
- \vskip\sphinxverbatimsmallskipamount
- \def\sphinxVerbatim@After
- {\nointerlineskip\kern\dimexpr\dp\strutbox
- \ifspx@opt@verbatimwithframe\else-\sphinxverbatimsep\fi
- \spx@ifcaptionpackage{-\abovecaptionskip}{}\relax
- \sphinxVerbatim@Title}%
- \fi
- \def\@captype{literalblock}%
- \capstart
- % \sphinxVerbatimTitle must reset color
- \setbox\sphinxVerbatim@TitleBox
- \hbox{\begin{minipage}{\linewidth}%
- % caption package may detect wrongly if top or bottom, so we help it
- \spx@ifcaptionpackage
- {\caption@setposition{\spx@opt@literalblockcappos}}{}%
- \sphinxVerbatimTitle
- \end{minipage}}%
- \fi
- \global\let\sphinxLiteralBlockLabel\empty
- \global\let\sphinxVerbatimTitle\empty
- \fboxsep\sphinxverbatimsep \fboxrule\sphinxverbatimborder
- \ifspx@opt@verbatimwithframe\else\fboxrule\z@\fi
- \let\FrameCommand \sphinxVerbatim@FrameCommand
- \let\FirstFrameCommand\sphinxVerbatim@FirstFrameCommand
- \let\MidFrameCommand \sphinxVerbatim@MidFrameCommand
- \let\LastFrameCommand \sphinxVerbatim@LastFrameCommand
- \ifspx@opt@verbatimhintsturnover\else
- \let\sphinxVerbatim@Continued\@empty
- \let\sphinxVerbatim@Continues\@empty
- \fi
- \ifspx@opt@verbatimwrapslines
- % fancyvrb's Verbatim puts each input line in (unbreakable) horizontal boxes.
- % This customization wraps each line from the input in a \vtop, thus
- % allowing it to wrap and display on two or more lines in the latex output.
- % - The codeline counter will be increased only once.
- % - The wrapped material will not break across pages, it is impossible
- % to achieve this without extensive rewrite of fancyvrb.
- % - The (not used in sphinx) obeytabs option to Verbatim is
- % broken by this change (showtabs and tabspace work).
- \let\sphinxVerbatimFormatLine\sphinxVerbatimFormatLineWrap
- \let\FV@Space\spx@verbatim@space
- % Allow breaks at special characters using \PYG... macros.
- \sphinxbreaksatspecials
- % Breaks at punctuation characters . , ; ? ! and / (needs catcode activation)
- \fvset{codes*=\sphinxbreaksviaactive}%
- \else % end of conditional code for wrapping long code lines
- \let\sphinxVerbatimFormatLine\sphinxVerbatimFormatLineNoWrap
- \fi
- \let\FancyVerbFormatLine\sphinxFancyVerbFormatLine
- % workaround to fancyvrb's check of \@currenvir
- \let\VerbatimEnvironment\sphinxVerbatimEnvironment
- % workaround to fancyvrb's check of current list depth
- \def\@toodeep {\advance\@listdepth\@ne}%
- % The list environment is needed to control perfectly the vertical space.
- % Note: \OuterFrameSep used by framed.sty is later set to \topsep hence 0pt.
- % - if caption: distance from last text baseline to caption baseline is
- % A+(B-F)+\ht\strutbox, A = \abovecaptionskip (default 10pt), B =
- % \baselineskip, F is the framed.sty \FrameHeightAdjust macro, default 6pt.
- % Formula valid for F < 10pt.
- % - distance of baseline of caption to top of frame is like for tables:
- % \sphinxbelowcaptionspace (=0.5\baselineskip)
- % - if no caption: distance of last text baseline to code frame is S+(B-F),
- % with S = \sphinxverbatimtopskip (=\smallskip)
- % - and distance from bottom of frame to next text baseline is
- % \baselineskip+\parskip.
- % The \trivlist is used to avoid possible "too deeply nested" error.
- \itemsep \z@skip
- \topsep \z@skip
- \partopsep \z@skip
- % trivlist will set \parsep to \parskip = zero
- % \leftmargin will be set to zero by trivlist
- \rightmargin\z@
- \parindent \z@% becomes \itemindent. Default zero, but perhaps overwritten.
- \trivlist\item\relax
- \ifsphinxverbatimwithminipage\spx@inframedtrue\fi
- % use a minipage if we are already inside a framed environment
- \ifspx@inframed\noindent\begin{minipage}{\linewidth}\fi
- \MakeFramed {% adapted over from framed.sty's snugshade environment
- \advance\hsize-\width\@totalleftmargin\z@\linewidth\hsize\@setminipage
- }%
- % For grid placement from \strut's in \FancyVerbFormatLine
- \lineskip\z@skip
- % active comma should not be overwritten by \@noligs
- \ifspx@opt@verbatimwrapslines
- \let\verbatim@nolig@list \sphinx@verbatim@nolig@list
- \fi
- % will fetch its optional arguments if any
- \OriginalVerbatim
-}
-{%
- \endOriginalVerbatim
- \par\unskip\@minipagefalse\endMakeFramed % from framed.sty snugshade
- \ifspx@inframed\end{minipage}\fi
- \endtrivlist
-}
-\newenvironment {sphinxVerbatimNoFrame}
- {\spx@opt@verbatimwithframefalse
- % needed for fancyvrb as literal code will end in \end{sphinxVerbatimNoFrame}
- \def\sphinxVerbatimEnvironment{\gdef\FV@EnvironName{sphinxVerbatimNoFrame}}%
- \begin{sphinxVerbatim}}
- {\end{sphinxVerbatim}}
-\newenvironment {sphinxVerbatimintable}
- {% don't use a frame if in a table cell
- \spx@opt@verbatimwithframefalse
- \sphinxverbatimwithminipagetrue
- % the literal block caption uses \sphinxcaption which is wrapper of \caption,
- % but \caption must be modified because longtable redefines it to work only
- % for the own table caption, and tabulary has multiple passes
- \let\caption\sphinxfigcaption
- % reduce above caption skip
- \def\spx@abovecaptionskip{\sphinxverbatimsmallskipamount}%
- \def\sphinxVerbatimEnvironment{\gdef\FV@EnvironName{sphinxVerbatimintable}}%
- \begin{sphinxVerbatim}}
- {\end{sphinxVerbatim}}
-
-
-%% PARSED LITERALS
-% allow long lines to wrap like they do in code-blocks
-
-% this should be kept in sync with definitions in sphinx.util.texescape
-\newcommand*\sphinxbreaksattexescapedchars{%
- \def\do##1##2% put potential break point before character
- {\def##1{\discretionary{}{\sphinxafterbreak\char`##2}{\char`##2}}}%
- \do\{\{\do\textless\<\do\#\#\do\%\%\do\$\$% {, <, #, %, $
- \def\do##1##2% put potential break point after character
- {\def##1{\discretionary{\char`##2}{\sphinxafterbreak}{\char`##2}}}%
- \do\_\_\do\}\}\do\textasciicircum\^\do\&\&% _, }, ^, &,
- \do\textgreater\>\do\textasciitilde\~% >, ~
-}
-\newcommand*\sphinxbreaksviaactiveinparsedliteral{%
- \sphinxbreaksviaactive % by default handles . , ; ? ! /
- \do\-% we need also the hyphen character (ends up "as is" in parsed-literal)
- \lccode`\~`\~ %
- % update \dospecials as it is used by \url
- % but deactivation will already have been done hence this is unneeded:
- % \expandafter\def\expandafter\dospecials\expandafter{\dospecials
- % \sphinxbreaksbeforeactivelist\sphinxbreaksafteractivelist\do\-}%
-}
-\newcommand*\sphinxbreaksatspaceinparsedliteral{%
- \lccode`~32 \lowercase{\let~}\spx@verbatim@space\lccode`\~`\~
-}
-\newcommand*{\sphinxunactivateextras}{\let\do\@makeother
- \sphinxbreaksbeforeactivelist\sphinxbreaksafteractivelist\do\-}%
-% the \catcode13=5\relax (deactivate end of input lines) is left to callers
-\newcommand*{\sphinxunactivateextrasandspace}{\catcode32=10\relax
- \sphinxunactivateextras}%
-% now for the modified alltt environment
-\newenvironment{sphinxalltt}
-{% at start of next line to workaround Emacs/AUCTeX issue with this file
-\begin{alltt}%
- \ifspx@opt@parsedliteralwraps
- \sbox\sphinxcontinuationbox {\spx@opt@verbatimcontinued}%
- \sbox\sphinxvisiblespacebox {\spx@opt@verbatimvisiblespace}%
- \sphinxbreaksattexescapedchars
- \sphinxbreaksviaactiveinparsedliteral
- \sphinxbreaksatspaceinparsedliteral
-% alltt takes care of the ' as derivative ("prime") in math mode
- \everymath\expandafter{\the\everymath\sphinxunactivateextrasandspace
- \catcode`\<=12\catcode`\>=12\catcode`\^=7\catcode`\_=8 }%
-% not sure if displayed math (align,...) can end up in parsed-literal, anyway
- \everydisplay\expandafter{\the\everydisplay
- \catcode13=5 \sphinxunactivateextrasandspace
- \catcode`\<=12\catcode`\>=12\catcode`\^=7\catcode`\_=8 }%
- \fi }
-{\end{alltt}}
-
-% Protect \href's first argument in contexts such as sphinxalltt (or
-% \sphinxcode). Sphinx uses \#, \%, \& ... always inside \sphinxhref.
-\protected\def\sphinxhref#1#2{{%
- \sphinxunactivateextrasandspace % never do \scantokens with active space!
- \endlinechar\m@ne\everyeof{{#2}}% keep catcode regime for #2
- \scantokens{\href{#1}}% normalise it for #1 during \href expansion
-}}
-% Same for \url. And also \nolinkurl for coherence.
-\protected\def\sphinxurl#1{{%
- \sphinxunactivateextrasandspace\everyeof{}% (<- precaution for \scantokens)
- \endlinechar\m@ne\scantokens{\url{#1}}%
-}}
-\protected\def\sphinxnolinkurl#1{{%
- \sphinxunactivateextrasandspace\everyeof{}%
- \endlinechar\m@ne\scantokens{\nolinkurl{#1}}%
-}}
-
-
-%% TOPIC AND CONTENTS BOXES
-%
-% Again based on use of "framed.sty", this allows breakable framed boxes.
-\long\def\spx@ShadowFBox#1{%
- \leavevmode\begingroup
- % first we frame the box #1
- \setbox\@tempboxa
- \hbox{\vrule\@width\sphinxshadowrule
- \vbox{\hrule\@height\sphinxshadowrule
- \kern\sphinxshadowsep
- \hbox{\kern\sphinxshadowsep #1\kern\sphinxshadowsep}%
- \kern\sphinxshadowsep
- \hrule\@height\sphinxshadowrule}%
- \vrule\@width\sphinxshadowrule}%
- % Now we add the shadow, like \shadowbox from fancybox.sty would do
- \dimen@\dimexpr.5\sphinxshadowrule+\sphinxshadowsize\relax
- \hbox{\vbox{\offinterlineskip
- \hbox{\copy\@tempboxa\kern-.5\sphinxshadowrule
- % add shadow on right side
- \lower\sphinxshadowsize
- \hbox{\vrule\@height\ht\@tempboxa \@width\dimen@}%
- }%
- \kern-\dimen@ % shift back vertically to bottom of frame
- % and add shadow at bottom
- \moveright\sphinxshadowsize
- \vbox{\hrule\@width\wd\@tempboxa \@height\dimen@}%
- }%
- % move left by the size of right shadow so shadow adds no width
- \kern-\sphinxshadowsize
- }%
- \endgroup
-}
-
-% use framed.sty to allow page breaks in frame+shadow
-% works well inside Lists and Quote-like environments
-% produced by ``topic'' directive (or local contents)
-% could nest if LaTeX writer authorized it
-\newenvironment{sphinxShadowBox}
- {\def\FrameCommand {\spx@ShadowFBox }%
- \advance\spx@image@maxheight
- -\dimexpr2\sphinxshadowrule
- +2\sphinxshadowsep
- +\sphinxshadowsize
- +\baselineskip\relax
- \let\sphinxincludegraphics\sphinxsafeincludegraphics
- % configure framed.sty not to add extra vertical spacing
- \ltx@ifundefined{OuterFrameSep}{}{\OuterFrameSep\z@skip}%
- % the \trivlist will add the vertical spacing on top and bottom which is
- % typical of center environment as used in Sphinx <= 1.4.1
- % the \noindent has the effet of an extra blank line on top, to
- % imitate closely the layout from Sphinx <= 1.4.1; the \FrameHeightAdjust
- % will put top part of frame on this baseline.
- \def\FrameHeightAdjust {\baselineskip}%
- % use package footnote to handle footnotes
- \savenotes
- \trivlist\item\noindent
- % use a minipage if we are already inside a framed environment
- \ifspx@inframed\begin{minipage}{\linewidth}\fi
- \MakeFramed {\spx@inframedtrue
- % framed.sty puts into "\width" the added width (=2shadowsep+2shadowrule)
- % adjust \hsize to what the contents must use
- \advance\hsize-\width
- % adjust LaTeX parameters to behave properly in indented/quoted contexts
- \FrameRestore
- % typeset the contents as in a minipage (Sphinx <= 1.4.1 used a minipage and
- % itemize/enumerate are therein typeset more tightly, we want to keep
- % that). We copy-paste from LaTeX source code but don't do a real minipage.
- \@pboxswfalse
- \let\@listdepth\@mplistdepth \@mplistdepth\z@
- \@minipagerestore
- \@setminipage
- }%
- }%
- {% insert the "endminipage" code
- \par\unskip
- \@minipagefalse
- \endMakeFramed
- \ifspx@inframed\end{minipage}\fi
- \endtrivlist
- % output the stored footnotes
- \spewnotes
- }
-
-
-%% NOTICES AND ADMONITIONS
-%
-% Some are quite plain
-% the spx@notice@bordercolor etc are set in the sphinxadmonition environment
-\newenvironment{sphinxlightbox}{%
- \par\allowbreak
- \noindent{\color{spx@notice@bordercolor}%
- \rule{\linewidth}{\spx@notice@border}}\par\nobreak
- {\parskip\z@skip\noindent}%
- }
- {%
- % counteract previous possible negative skip (French lists!):
- % (we can't cancel that any earlier \vskip introduced a potential pagebreak)
- \sphinxvspacefixafterfrenchlists
- \nobreak\vbox{\noindent\kern\@totalleftmargin
- {\color{spx@notice@bordercolor}%
- \rule[\dimexpr.4\baselineskip-\spx@notice@border\relax]
- {\linewidth}{\spx@notice@border}}\hss}\allowbreak
- }% end of sphinxlightbox environment definition
-% may be renewenvironment'd by user for complete customization
-\newenvironment{sphinxnote}[1]
- {\begin{sphinxlightbox}\sphinxstrong{#1} }{\end{sphinxlightbox}}
-\newenvironment{sphinxhint}[1]
- {\begin{sphinxlightbox}\sphinxstrong{#1} }{\end{sphinxlightbox}}
-\newenvironment{sphinximportant}[1]
- {\begin{sphinxlightbox}\sphinxstrong{#1} }{\end{sphinxlightbox}}
-\newenvironment{sphinxtip}[1]
- {\begin{sphinxlightbox}\sphinxstrong{#1} }{\end{sphinxlightbox}}
-% or just use the package options
-% these are needed for common handling by notice environment of lightbox
-% and heavybox but they are currently not used by lightbox environment
-% and there is consequently no corresponding package option
-\definecolor{sphinxnoteBgColor}{rgb}{1,1,1}
-\definecolor{sphinxhintBgColor}{rgb}{1,1,1}
-\definecolor{sphinximportantBgColor}{rgb}{1,1,1}
-\definecolor{sphinxtipBgColor}{rgb}{1,1,1}
-
-% Others get more distinction
-% Code adapted from framed.sty's "snugshade" environment.
-% Nesting works (inner frames do not allow page breaks).
-\newenvironment{sphinxheavybox}{\par
- \setlength{\FrameRule}{\spx@notice@border}%
- \setlength{\FrameSep}{\dimexpr.6\baselineskip-\FrameRule\relax}
- \advance\spx@image@maxheight
- -\dimexpr2\FrameRule
- +2\FrameSep
- +\baselineskip\relax % will happen again if nested, needed indeed!
- \let\sphinxincludegraphics\sphinxsafeincludegraphics
- % configure framed.sty's parameters to obtain same vertical spacing
- % as for "light" boxes. We need for this to manually insert parskip glue and
- % revert a skip done by framed before the frame.
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- \savenotes
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- \noindent\begin{minipage}{\linewidth}
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- % handle case where notice is first thing in a list item (or is quoted)
- \if@inlabel
- \noindent\par\vspace{-\baselineskip}
- \else
- \vspace{\parskip}
- \fi
- \fi
- \MakeFramed {\spx@inframedtrue
- \advance\hsize-\width \@totalleftmargin\z@ \linewidth\hsize
- % minipage initialization copied from LaTeX source code.
- \@pboxswfalse
- \let\@listdepth\@mplistdepth \@mplistdepth\z@
- \@minipagerestore
- \@setminipage }%
- }
- {%
- \par\unskip
- \@minipagefalse
- \endMakeFramed
- \ifspx@inframed\end{minipage}\fi
- % set footnotes at bottom of page
- \spewnotes
- % arrange for similar spacing below frame as for "light" boxes.
- \vskip .4\baselineskip
- }% end of sphinxheavybox environment definition
-% may be renewenvironment'd by user for complete customization
-\newenvironment{sphinxwarning}[1]
- {\begin{sphinxheavybox}\sphinxstrong{#1} }{\end{sphinxheavybox}}
-\newenvironment{sphinxcaution}[1]
- {\begin{sphinxheavybox}\sphinxstrong{#1} }{\end{sphinxheavybox}}
-\newenvironment{sphinxattention}[1]
- {\begin{sphinxheavybox}\sphinxstrong{#1} }{\end{sphinxheavybox}}
-\newenvironment{sphinxdanger}[1]
- {\begin{sphinxheavybox}\sphinxstrong{#1} }{\end{sphinxheavybox}}
-\newenvironment{sphinxerror}[1]
- {\begin{sphinxheavybox}\sphinxstrong{#1} }{\end{sphinxheavybox}}
-% or just use package options
-
-% the \colorlet of xcolor (if at all loaded) is overkill for our use case
-\newcommand{\sphinxcolorlet}[2]
- {\expandafter\let\csname\@backslashchar color@#1\expandafter\endcsname
- \csname\@backslashchar color@#2\endcsname }
-
-% the main dispatch for all types of notices
-\newenvironment{sphinxadmonition}[2]{% #1=type, #2=heading
- % can't use #1 directly in definition of end part
- \def\spx@noticetype {#1}%
- % set parameters of heavybox/lightbox
- \sphinxcolorlet{spx@notice@bordercolor}{sphinx#1BorderColor}%
- \sphinxcolorlet{spx@notice@bgcolor}{sphinx#1BgColor}%
- \spx@notice@border \dimexpr\csname spx@opt@#1border\endcsname\relax
- % start specific environment, passing the heading as argument
- \begin{sphinx#1}{#2}}
- % workaround some LaTeX "feature" of \end command
- {\edef\spx@temp{\noexpand\end{sphinx\spx@noticetype}}\spx@temp}
-
-
-%% PYTHON DOCS MACROS AND ENVIRONMENTS
-% (some macros here used by \maketitle in sphinxmanual.cls and sphinxhowto.cls)
-
-% \moduleauthor{name}{email}
-\newcommand{\moduleauthor}[2]{}
-
-% \sectionauthor{name}{email}
-\newcommand{\sectionauthor}[2]{}
-
-% Allow the release number to be specified independently of the
-% \date{}. This allows the date to reflect the document's date and
-% release to specify the release that is documented.
-%
-\newcommand{\py@release}{\releasename\space\version}
-\newcommand{\version}{}% part of \py@release, used by title page and headers
-% \releaseinfo is used on titlepage (sphinxmanual.cls, sphinxhowto.cls)
-\newcommand{\releaseinfo}{}
-\newcommand{\setreleaseinfo}[1]{\renewcommand{\releaseinfo}{#1}}
-% this is inserted via template and #1=release config variable
-\newcommand{\release}[1]{\renewcommand{\version}{#1}}
-% this is defined by template to 'releasename' latex_elements key
-\newcommand{\releasename}{}
-% Fix issue in case release and releasename deliberately left blank
-\newcommand{\sphinxheadercomma}{, }% used in fancyhdr header definition
-\newcommand{\sphinxifemptyorblank}[1]{%
-% test after one expansion of macro #1 if contents is empty or spaces
- \if&\expandafter\@firstofone\detokenize\expandafter{#1}&%
- \expandafter\@firstoftwo\else\expandafter\@secondoftwo\fi}%
-\AtBeginDocument {%
- \sphinxifemptyorblank{\releasename}
- {\sphinxifemptyorblank{\version}{\let\sphinxheadercomma\empty}{}}
- {}%
-}%
-
-% Allow specification of the author's address separately from the
-% author's name. This can be used to format them differently, which
-% is a good thing.
-%
-\newcommand{\py@authoraddress}{}
-\newcommand{\authoraddress}[1]{\renewcommand{\py@authoraddress}{#1}}
-
-% {fulllineitems} is the main environment for object descriptions.
-%
-\newcommand{\py@itemnewline}[1]{%
- \kern\labelsep
- \@tempdima\linewidth
- \advance\@tempdima \labelwidth\makebox[\@tempdima][l]{#1}%
- \kern-\labelsep
-}
-
-\newenvironment{fulllineitems}{%
- \begin{list}{}{\labelwidth \leftmargin
- \rightmargin \z@ \topsep -\parskip \partopsep \parskip
- \itemsep -\parsep
- \let\makelabel=\py@itemnewline}%
-}{\end{list}}
-
-% Signatures, possibly multi-line
-%
-\newlength{\py@argswidth}
-\newcommand{\py@sigparams}[2]{%
- \parbox[t]{\py@argswidth}{#1\sphinxcode{)}#2}}
-\newcommand{\pysigline}[1]{\item[{#1}]}
-\newcommand{\pysiglinewithargsret}[3]{%
- \settowidth{\py@argswidth}{#1\sphinxcode{(}}%
- \addtolength{\py@argswidth}{-2\py@argswidth}%
- \addtolength{\py@argswidth}{\linewidth}%
- \item[{#1\sphinxcode{(}\py@sigparams{#2}{#3}}]}
-\newcommand{\pysigstartmultiline}{%
- \def\pysigstartmultiline{\vskip\smallskipamount\parskip\z@skip\itemsep\z@skip}%
- \edef\pysigstopmultiline
- {\noexpand\leavevmode\parskip\the\parskip\relax\itemsep\the\itemsep\relax}%
- \parskip\z@skip\itemsep\z@skip
-}
-
-% Production lists
-%
-\newenvironment{productionlist}{%
-% \def\sphinxoptional##1{{\Large[}##1{\Large]}}
- \def\production##1##2{\\\sphinxcode{\sphinxupquote{##1}}&::=&\sphinxcode{\sphinxupquote{##2}}}%
- \def\productioncont##1{\\& &\sphinxcode{\sphinxupquote{##1}}}%
- \parindent=2em
- \indent
- \setlength{\LTpre}{0pt}%
- \setlength{\LTpost}{0pt}%
- \begin{longtable}[l]{lcl}
-}{%
- \end{longtable}
-}
-
-% Definition lists; requested by AMK for HOWTO documents. Probably useful
-% elsewhere as well, so keep in in the general style support.
-%
-\newenvironment{definitions}{%
- \begin{description}%
- \def\term##1{\item[{##1}]\mbox{}\\*[0mm]}%
-}{%
- \end{description}%
-}
-
-%% FROM DOCTUTILS LATEX WRITER
-%
-% The following is stuff copied from docutils' latex writer.
-%
-\newcommand{\optionlistlabel}[1]{\normalfont\bfseries #1 \hfill}% \bf deprecated
-\newenvironment{optionlist}[1]
-{\begin{list}{}
- {\setlength{\labelwidth}{#1}
- \setlength{\rightmargin}{1cm}
- \setlength{\leftmargin}{\rightmargin}
- \addtolength{\leftmargin}{\labelwidth}
- \addtolength{\leftmargin}{\labelsep}
- \renewcommand{\makelabel}{\optionlistlabel}}
-}{\end{list}}
-
-\newlength{\lineblockindentation}
-\setlength{\lineblockindentation}{2.5em}
-\newenvironment{lineblock}[1]
-{\begin{list}{}
- {\setlength{\partopsep}{\parskip}
- \addtolength{\partopsep}{\baselineskip}
- \topsep0pt\itemsep0.15\baselineskip\parsep0pt
- \leftmargin#1\relax}
- \raggedright}
-{\end{list}}
-
-% From docutils.writers.latex2e
-% inline markup (custom roles)
-% \DUrole{#1}{#2} tries \DUrole#1{#2}
-\providecommand*{\DUrole}[2]{%
- \ifcsname DUrole\detokenize{#1}\endcsname
- \csname DUrole\detokenize{#1}\endcsname{#2}%
- \else% backwards compatibility: try \docutilsrole#1{#2}
- \ifcsname docutilsrole\detokenize{#1}\endcsname
- \csname docutilsrole\detokenize{#1}\endcsname{#2}%
- \else
- #2%
- \fi
- \fi
-}
-
-\providecommand*{\DUprovidelength}[2]{%
- \ifdefined#1\else\newlength{#1}\setlength{#1}{#2}\fi
-}
-
-\DUprovidelength{\DUlineblockindent}{2.5em}
-\ifdefined\DUlineblock\else
- \newenvironment{DUlineblock}[1]{%
- \list{}{\setlength{\partopsep}{\parskip}
- \addtolength{\partopsep}{\baselineskip}
- \setlength{\topsep}{0pt}
- \setlength{\itemsep}{0.15\baselineskip}
- \setlength{\parsep}{0pt}
- \setlength{\leftmargin}{#1}}
- \raggedright
- }
- {\endlist}
-\fi
-
-%% TEXT STYLING
-%
-% to obtain straight quotes we execute \@noligs as patched by upquote, and
-% \scantokens is needed in cases where it would be too late for the macro to
-% first set catcodes and then fetch its argument. We also make the contents
-% breakable at non-escaped . , ; ? ! / using \sphinxbreaksviaactive.
-% the macro must be protected if it ends up used in moving arguments,
-% in 'alltt' \@noligs is done already, and the \scantokens must be avoided.
-\protected\def\sphinxupquote#1{{\def\@tempa{alltt}%
- \ifx\@tempa\@currenvir\else
- \ifspx@opt@inlineliteralwraps
- \sphinxbreaksviaactive\let\sphinxafterbreak\empty
- % do not overwrite the comma set-up
- \let\verbatim@nolig@list\sphinx@literal@nolig@list
- \fi
- % fix a space-gobbling issue due to LaTeX's original \do@noligs
- \let\do@noligs\sphinx@do@noligs
- \@noligs\endlinechar\m@ne\everyeof{}% (<- in case inside \sphinxhref)
- \expandafter\scantokens
- \fi {{#1}}}}% extra brace pair to fix end-space gobbling issue...
-\def\sphinx@do@noligs #1{\catcode`#1\active\begingroup\lccode`\~`#1\relax
- \lowercase{\endgroup\def~{\leavevmode\kern\z@\char`#1 }}}
-\def\sphinx@literal@nolig@list {\do\`\do\<\do\>\do\'\do\-}%
-
-% Some custom font markup commands.
-\protected\def\sphinxstrong#1{\textbf{#1}}
-\protected\def\sphinxcode#1{\texttt{#1}}
-\protected\def\sphinxbfcode#1{\textbf{\sphinxcode{#1}}}
-\protected\def\sphinxemail#1{\textsf{#1}}
-\protected\def\sphinxtablecontinued#1{\textsf{#1}}
-\protected\def\sphinxtitleref#1{\emph{#1}}
-\protected\def\sphinxmenuselection#1{\emph{#1}}
-\protected\def\sphinxguilabel#1{\emph{#1}}
-\protected\def\sphinxaccelerator#1{\underline{#1}}
-\protected\def\sphinxcrossref#1{\emph{#1}}
-\protected\def\sphinxtermref#1{\emph{#1}}
-% \optional is used for ``[, arg]``, i.e. desc_optional nodes.
-\long\protected\def\sphinxoptional#1{%
- {\textnormal{\Large[}}{#1}\hspace{0.5mm}{\textnormal{\Large]}}}
-
-% additional customizable styling
-\def\sphinxstyleindexentry #1{\texttt{#1}}
-\def\sphinxstyleindexextra #1{ (\emph{#1})}
-\def\sphinxstyleindexpageref #1{, \pageref{#1}}
-\def\sphinxstyleindexpagemain#1{\textbf{#1}}
-\protected\def\spxentry#1{#1}% will get \let to \sphinxstyleindexentry in index
-\protected\def\spxextra#1{#1}% will get \let to \sphinxstyleindexextra in index
-\def\sphinxstyleindexlettergroup #1%
- {{\Large\sffamily#1}\nopagebreak\vspace{1mm}}
-\def\sphinxstyleindexlettergroupDefault #1%
- {{\Large\sffamily\sphinxnonalphabeticalgroupname}\nopagebreak\vspace{1mm}}
-\protected\def\sphinxstyletopictitle #1{\textbf{#1}\par\medskip}
-\let\sphinxstylesidebartitle\sphinxstyletopictitle
-\protected\def\sphinxstyleothertitle #1{\textbf{#1}}
-\protected\def\sphinxstylesidebarsubtitle #1{~\\\textbf{#1} \smallskip}
-% \text.. commands do not allow multiple paragraphs
-\protected\def\sphinxstyletheadfamily {\sffamily}
-\protected\def\sphinxstyleemphasis #1{\emph{#1}}
-\protected\def\sphinxstyleliteralemphasis#1{\emph{\sphinxcode{#1}}}
-\protected\def\sphinxstylestrong #1{\textbf{#1}}
-\protected\def\sphinxstyleliteralstrong#1{\sphinxbfcode{#1}}
-\protected\def\sphinxstyleabbreviation #1{\textsc{#1}}
-\protected\def\sphinxstyleliteralintitle#1{\sphinxcode{#1}}
-\newcommand*\sphinxstylecodecontinued[1]{\footnotesize(#1)}%
-\newcommand*\sphinxstylecodecontinues[1]{\footnotesize(#1)}%
-% figure legend comes after caption and may contain arbitrary body elements
-\newenvironment{sphinxlegend}{\par\small}{\par}
-% reduce hyperref "Token not allowed in a PDF string" warnings on PDF builds
-\AtBeginDocument{\pdfstringdefDisableCommands{%
-% all "protected" macros possibly ending up in section titles should be here
- \let\sphinxstyleemphasis \@firstofone
- \let\sphinxstyleliteralemphasis \@firstofone
- \let\sphinxstylestrong \@firstofone
- \let\sphinxstyleliteralstrong \@firstofone
- \let\sphinxstyleabbreviation \@firstofone
- \let\sphinxstyleliteralintitle \@firstofone
- \let\sphinxupquote \@firstofone
- \let\sphinxstrong \@firstofone
- \let\sphinxcode \@firstofone
- \let\sphinxbfcode \@firstofone
- \let\sphinxemail \@firstofone
- \let\sphinxcrossref \@firstofone
- \let\sphinxtermref \@firstofone
-}}
-
-% For curly braces inside \index macro
-\def\sphinxleftcurlybrace{\{}
-\def\sphinxrightcurlybrace{\}}
-
-% Declare Unicode characters used by linux tree command to pdflatex utf8/utf8x
-\def\spx@bd#1#2{%
- \leavevmode
- \begingroup
- \ifx\spx@bd@height \@undefined\def\spx@bd@height{\baselineskip}\fi
- \ifx\spx@bd@width \@undefined\setbox0\hbox{0}\def\spx@bd@width{\wd0 }\fi
- \ifx\spx@bd@thickness\@undefined\def\spx@bd@thickness{.6\p@}\fi
- \ifx\spx@bd@lower \@undefined\def\spx@bd@lower{\dp\strutbox}\fi
- \lower\spx@bd@lower#1{#2}%
- \endgroup
-}%
-\@namedef{sphinx@u2500}% BOX DRAWINGS LIGHT HORIZONTAL
- {\spx@bd{\vbox to\spx@bd@height}
- {\vss\hrule\@height\spx@bd@thickness
- \@width\spx@bd@width\vss}}%
-\@namedef{sphinx@u2502}% BOX DRAWINGS LIGHT VERTICAL
- {\spx@bd{\hb@xt@\spx@bd@width}
- {\hss\vrule\@height\spx@bd@height
- \@width \spx@bd@thickness\hss}}%
-\@namedef{sphinx@u2514}% BOX DRAWINGS LIGHT UP AND RIGHT
- {\spx@bd{\hb@xt@\spx@bd@width}
- {\hss\raise.5\spx@bd@height
- \hb@xt@\z@{\hss\vrule\@height.5\spx@bd@height
- \@width \spx@bd@thickness\hss}%
- \vbox to\spx@bd@height{\vss\hrule\@height\spx@bd@thickness
- \@width.5\spx@bd@width\vss}}}%
-\@namedef{sphinx@u251C}% BOX DRAWINGS LIGHT VERTICAL AND RIGHT
- {\spx@bd{\hb@xt@\spx@bd@width}
- {\hss
- \hb@xt@\z@{\hss\vrule\@height\spx@bd@height
- \@width \spx@bd@thickness\hss}%
- \vbox to\spx@bd@height{\vss\hrule\@height\spx@bd@thickness
- \@width.5\spx@bd@width\vss}}}%
-\protected\def\sphinxunichar#1{\@nameuse{sphinx@u#1}}%
-
-% Tell TeX about pathological hyphenation cases:
-\hyphenation{Base-HTTP-Re-quest-Hand-ler}
-\endinput
diff --git a/documentation/Sphinx/build/latex/sphinx.xdy b/documentation/Sphinx/build/latex/sphinx.xdy
deleted file mode 100644
index 0d02ef3372a4681baeb23021a5ec93590ea9ff61..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinx.xdy
+++ /dev/null
@@ -1,207 +0,0 @@
-;;; -*- mode: lisp; coding: utf-8; -*-
-
-;; Unfortunately xindy is out-of-the-box hyperref-incompatible. This
-;; configuration is a workaround, which requires to pass option
-;; hyperindex=false to hyperref.
-;; textit and emph not currently used, spxpagem replaces former textbf
-(define-attributes (("textbf" "textit" "emph" "spxpagem" "default")))
-(markup-locref :open "\textbf{\hyperpage{" :close "}}" :attr "textbf")
-(markup-locref :open "\textit{\hyperpage{" :close "}}" :attr "textit")
-(markup-locref :open "\emph{\hyperpage{" :close "}}" :attr "emph")
-(markup-locref :open "\spxpagem{\hyperpage{" :close "}}" :attr "spxpagem")
-(markup-locref :open "\hyperpage{" :close "}" :attr "default")
-
-(require "numeric-sort.xdy")
-
-;; xindy base module latex.xdy loads tex.xdy and the latter instructs
-;; xindy to ignore **all** TeX macros in .idx entries, except those
-;; explicitely described in merge rule. But when after applying all
-;; merge rules an empty string results, xindy raises an error:
-
-;; ERROR: CHAR: index 0 should be less than the length of the string
-
-;; For example when using pdflatex with utf-8 characters the index
-;; file will contain \IeC macros and they will get ignored except if
-;; suitable merge rules are loaded early. The texindy script coming
-;; with xindy provides this, but only for Latin scripts. The texindy
-;; man page says to use rather xelatex or lualatex in case of Cyrillic
-;; scripts.
-
-;; Sphinx contributes LICRcyr2utf8.xdy to provide support for Cyrillic
-;; scripts for the pdflatex engine.
-
-;; Another issue caused by xindy ignoring all TeX macros except those
-;; explicitely declared reveals itself when attempting to index ">>>",
-;; as the ">" is converted to "\textgreater{}" by Sphinx's LaTeX
-;; escaping.
-
-;; To fix this, Sphinx does **not** use texindy, and does not even
-;; load the xindy latex.xdy base module.
-
-;(require "latex.xdy")
-
-;; Rather it incorporates some suitable extracts from latex.xdy and
-;; tex.xdy with additional Sphinx contributed rules.
-
-;; But, this means for pdflatex and Latin scripts that the xindy file
-;; tex/inputenc/uf8.xdy is not usable because it refers to the macro
-;; \IeC only sporadically, and as tex.xdy is not loaded, a rule such as
-;; (merge-rule "\'e" "é" :string)
-;; does not work, it must be
-;; (merge-rule "\IeC {\'e}" "é" :string)
-;; So Sphinx contributes LICRlatin2utf8.xdy to mitigate that problem.
-
-;;;;;;;; extracts from tex.xdy (discarding most original comments):
-
-;;;
-;;; TeX conventions
-;;;
-
-;; Discard leading and trailing white space. Collapse multiple white
-;; space characters to blank.
-
-(merge-rule "^ +" "" :eregexp)
-(merge-rule " +$" "" :eregexp)
-(merge-rule " +" " " :eregexp)
-
-;; Handle TeX markup
-
-(merge-rule "\\([{}$%&#])" "\1" :eregexp)
-
-;;;;;;;; end of extracts from xindy's tex.xdy
-
-;;;;;;;; extracts from latex.xdy:
-
-;; Standard location classes: arabic and roman numbers, and alphabets.
-
-(define-location-class "arabic-page-numbers" ("arabic-numbers"))
-(define-location-class "roman-page-numbers" ("roman-numbers-lowercase"))
-(define-location-class "Roman-page-numbers" ("roman-numbers-uppercase"))
-(define-location-class "alpha-page-numbers" ("alpha"))
-(define-location-class "Alpha-page-numbers" ("ALPHA"))
-
-;; Output Markup
-
-(markup-letter-group-list :sep "~n~n \indexspace~n")
-
-(markup-indexentry :open "~n \item " :depth 0)
-(markup-indexentry :open "~n \subitem " :depth 1)
-(markup-indexentry :open "~n \subsubitem " :depth 2)
-
-(markup-locclass-list :open ", " :sep ", ")
-(markup-locref-list :sep ", ")
-
-;;;;;;;; end of extracts from latex.xdy
-
-;; The LaTeX \index command turns \ into normal character so the TeX macros
-;; written to .idx files are not followed by a blank. This is different
-;; from non-ascii letters which end up (with pdflatex) as \IeC macros in .idx
-;; file, with a blank space after \IeC
-
-;; Details of the syntax are explained at
-;; http://xindy.sourceforge.net/doc/manual-3.html
-;; In absence of :string, "xindy uses an auto-detection mechanism to decide,
-;; if the pattern is a regular expression or not". But it is not obvious to
-;; guess, for example "\\_" is not detected as RE but "\\P\{\}" is, so for
-;; being sure we apply the :string switch everywhere and do not use \\ etc...
-
-;; Go back from sphinx.util.texescape TeX macros to UTF-8
-
-(merge-rule "\sphinxleftcurlybrace{}" "{" :string)
-(merge-rule "\sphinxrightcurlybrace{}" "}" :string)
-(merge-rule "\_" "_" :string)
-(merge-rule "{[}" "[" :string)
-(merge-rule "{]}" "]" :string)
-(merge-rule "{}`" "`" :string)
-(merge-rule "\textbackslash{}" "\" :string) ; " for Emacs syntax highlighting
-(merge-rule "\textasciitilde{}" "~~" :string); the ~~ escape is needed here
-(merge-rule "\textless{}" "<" :string)
-(merge-rule "\textgreater{}" ">" :string)
-(merge-rule "\textasciicircum{}" "^" :string)
-(merge-rule "\P{}" "¶" :string)
-(merge-rule "\S{}" "§" :string)
-(merge-rule "\texteuro{}" "€" :string)
-(merge-rule "\(\infty\)" "∞" :string)
-(merge-rule "\(\pm\)" "±" :string)
-(merge-rule "\(\rightarrow\)" "→" :string)
-(merge-rule "\(\checkmark\)" "✓" :string)
-(merge-rule "\textendash{}" "–" :string)
-(merge-rule "\textbar{}" "|" :string)
-(merge-rule "\(\sp{\text{0}}\)" "⁰" :string)
-(merge-rule "\(\sp{\text{1}}\)" "¹" :string)
-(merge-rule "\(\sp{\text{2}}\)" "²" :string)
-(merge-rule "\(\sp{\text{3}}\)" "³" :string)
-(merge-rule "\(\sp{\text{4}}\)" "⁴" :string)
-(merge-rule "\(\sp{\text{5}}\)" "⁵" :string)
-(merge-rule "\(\sp{\text{6}}\)" "⁶" :string)
-(merge-rule "\(\sp{\text{7}}\)" "⁷" :string)
-(merge-rule "\(\sp{\text{8}}\)" "⁸" :string)
-(merge-rule "\(\sp{\text{9}}\)" "⁹" :string)
-(merge-rule "\(\sb{\text{0}}\)" "₀" :string)
-(merge-rule "\(\sb{\text{1}}\)" "₁" :string)
-(merge-rule "\(\sb{\text{2}}\)" "₂" :string)
-(merge-rule "\(\sb{\text{3}}\)" "₃" :string)
-(merge-rule "\(\sb{\text{4}}\)" "₄" :string)
-(merge-rule "\(\sb{\text{5}}\)" "₅" :string)
-(merge-rule "\(\sb{\text{6}}\)" "₆" :string)
-(merge-rule "\(\sb{\text{7}}\)" "₇" :string)
-(merge-rule "\(\sb{\text{8}}\)" "₈" :string)
-(merge-rule "\(\sb{\text{9}}\)" "₉" :string)
-(merge-rule "\(\alpha\)" "α" :string)
-(merge-rule "\(\beta\)" "β" :string)
-(merge-rule "\(\gamma\)" "γ" :string)
-(merge-rule "\(\delta\)" "δ" :string)
-(merge-rule "\(\epsilon\)" "ε" :string)
-(merge-rule "\(\zeta\)" "ζ" :string)
-(merge-rule "\(\eta\)" "η" :string)
-(merge-rule "\(\theta\)" "θ" :string)
-(merge-rule "\(\iota\)" "ι" :string)
-(merge-rule "\(\kappa\)" "κ" :string)
-(merge-rule "\(\lambda\)" "λ" :string)
-(merge-rule "\(\mu\)" "μ" :string)
-(merge-rule "\(\nu\)" "ν" :string)
-(merge-rule "\(\xi\)" "ξ" :string)
-(merge-rule "\(\pi\)" "π" :string)
-(merge-rule "\(\rho\)" "ρ" :string)
-(merge-rule "\(\sigma\)" "σ" :string)
-(merge-rule "\(\tau\)" "τ" :string)
-(merge-rule "\(\upsilon\)" "υ" :string)
-(merge-rule "\(\phi\)" "φ" :string)
-(merge-rule "\(\chi\)" "χ" :string)
-(merge-rule "\(\psi\)" "ψ" :string)
-(merge-rule "\(\omega\)" "ω" :string)
-(merge-rule "\(\Gamma\)" "Γ" :string)
-(merge-rule "\(\Delta\)" "Δ" :string)
-(merge-rule "\(\Theta\)" "Θ" :string)
-(merge-rule "\(\Lambda\)" "Λ" :string)
-(merge-rule "\(\Xi\)" "Ξ" :string)
-(merge-rule "\(\Pi\)" "Π" :string)
-(merge-rule "\(\Sigma\)" "Σ" :string)
-(merge-rule "\(\Upsilon\)" "Υ" :string)
-(merge-rule "\(\Phi\)" "Φ" :string)
-(merge-rule "\(\Psi\)" "Ψ" :string)
-(merge-rule "\(\Omega\)" "Ω" :string)
-
-;; This xindy module provides some basic support for "see"
-(require "makeindex.xdy")
-
-;; This creates one-letter headings and works fine with utf-8 letters.
-;; For Cyrillic with pdflatex works thanks to LICRcyr2utf8.xdy
-(require "latin-lettergroups.xdy")
-
-;; currently we don't (know how to easily) separate "Numbers" from
-;; "Symbols" with xindy as is the case with makeindex.
-(markup-index :open "\begin{sphinxtheindex}
-\let\lettergroup\sphinxstyleindexlettergroup
-\let\lettergroupDefault\sphinxstyleindexlettergroupDefault
-\let\spxpagem\sphinxstyleindexpagemain
-\let\spxentry\sphinxstyleindexentry
-\let\spxextra\sphinxstyleindexextra
-
-"
- :close "
-
-\end{sphinxtheindex}
-"
- :tree)
-
diff --git a/documentation/Sphinx/build/latex/sphinxhighlight.sty b/documentation/Sphinx/build/latex/sphinxhighlight.sty
deleted file mode 100644
index 1557ce6e32d943a825cc18fa11a32e3ec2f7cc26..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinxhighlight.sty
+++ /dev/null
@@ -1,105 +0,0 @@
-\NeedsTeXFormat{LaTeX2e}[1995/12/01]
-\ProvidesPackage{sphinxhighlight}[2016/05/29 stylesheet for highlighting with pygments]
-
-
-\makeatletter
-\def\PYG@reset{\let\PYG@it=\relax \let\PYG@bf=\relax%
- \let\PYG@ul=\relax \let\PYG@tc=\relax%
- \let\PYG@bc=\relax \let\PYG@ff=\relax}
-\def\PYG@tok#1{\csname PYG@tok@#1\endcsname}
-\def\PYG@toks#1+{\ifx\relax#1\empty\else%
- \PYG@tok{#1}\expandafter\PYG@toks\fi}
-\def\PYG@do#1{\PYG@bc{\PYG@tc{\PYG@ul{%
- \PYG@it{\PYG@bf{\PYG@ff{#1}}}}}}}
-\def\PYG#1#2{\PYG@reset\PYG@toks#1+\relax+\PYG@do{#2}}
-
-\expandafter\def\csname PYG@tok@w\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.73,0.73}{##1}}}
-\expandafter\def\csname PYG@tok@c\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}}
-\expandafter\def\csname PYG@tok@cp\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@cs\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}\def\PYG@bc##1{\setlength{\fboxsep}{0pt}\colorbox[rgb]{1.00,0.94,0.94}{\strut ##1}}}
-\expandafter\def\csname PYG@tok@k\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@kp\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@kt\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.56,0.13,0.00}{##1}}}
-\expandafter\def\csname PYG@tok@o\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.40,0.40,0.40}{##1}}}
-\expandafter\def\csname PYG@tok@ow\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@nb\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@nf\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.02,0.16,0.49}{##1}}}
-\expandafter\def\csname PYG@tok@nc\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.05,0.52,0.71}{##1}}}
-\expandafter\def\csname PYG@tok@nn\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.05,0.52,0.71}{##1}}}
-\expandafter\def\csname PYG@tok@ne\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@nv\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.38,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@no\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.38,0.68,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@nl\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.13,0.44}{##1}}}
-\expandafter\def\csname PYG@tok@ni\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.84,0.33,0.22}{##1}}}
-\expandafter\def\csname PYG@tok@na\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@nt\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.02,0.16,0.45}{##1}}}
-\expandafter\def\csname PYG@tok@nd\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.33,0.33,0.33}{##1}}}
-\expandafter\def\csname PYG@tok@s\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@sd\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@si\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.44,0.63,0.82}{##1}}}
-\expandafter\def\csname PYG@tok@se\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@sr\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.14,0.33,0.53}{##1}}}
-\expandafter\def\csname PYG@tok@ss\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.32,0.47,0.09}{##1}}}
-\expandafter\def\csname PYG@tok@sx\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.78,0.36,0.04}{##1}}}
-\expandafter\def\csname PYG@tok@m\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@gh\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.00,0.50}{##1}}}
-\expandafter\def\csname PYG@tok@gu\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.50,0.00,0.50}{##1}}}
-\expandafter\def\csname PYG@tok@gd\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.63,0.00,0.00}{##1}}}
-\expandafter\def\csname PYG@tok@gi\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.63,0.00}{##1}}}
-\expandafter\def\csname PYG@tok@gr\endcsname{\def\PYG@tc##1{\textcolor[rgb]{1.00,0.00,0.00}{##1}}}
-\expandafter\def\csname PYG@tok@ge\endcsname{\let\PYG@it=\textit}
-\expandafter\def\csname PYG@tok@gs\endcsname{\let\PYG@bf=\textbf}
-\expandafter\def\csname PYG@tok@gp\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.78,0.36,0.04}{##1}}}
-\expandafter\def\csname PYG@tok@go\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.20,0.20,0.20}{##1}}}
-\expandafter\def\csname PYG@tok@gt\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.27,0.87}{##1}}}
-\expandafter\def\csname PYG@tok@err\endcsname{\def\PYG@bc##1{\setlength{\fboxsep}{0pt}\fcolorbox[rgb]{1.00,0.00,0.00}{1,1,1}{\strut ##1}}}
-\expandafter\def\csname PYG@tok@kc\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@kd\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@kn\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@kr\endcsname{\let\PYG@bf=\textbf\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@bp\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.00,0.44,0.13}{##1}}}
-\expandafter\def\csname PYG@tok@fm\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.02,0.16,0.49}{##1}}}
-\expandafter\def\csname PYG@tok@vc\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.38,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@vg\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.38,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@vi\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.38,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@vm\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.73,0.38,0.84}{##1}}}
-\expandafter\def\csname PYG@tok@sa\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@sb\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@sc\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@dl\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@s2\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@sh\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@s1\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.25,0.44,0.63}{##1}}}
-\expandafter\def\csname PYG@tok@mb\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@mf\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@mh\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@mi\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@il\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@mo\endcsname{\def\PYG@tc##1{\textcolor[rgb]{0.13,0.50,0.31}{##1}}}
-\expandafter\def\csname PYG@tok@ch\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}}
-\expandafter\def\csname PYG@tok@cm\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}}
-\expandafter\def\csname PYG@tok@cpf\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}}
-\expandafter\def\csname PYG@tok@c1\endcsname{\let\PYG@it=\textit\def\PYG@tc##1{\textcolor[rgb]{0.25,0.50,0.56}{##1}}}
-
-\def\PYGZbs{\char`\\}
-\def\PYGZus{\char`\_}
-\def\PYGZob{\char`\{}
-\def\PYGZcb{\char`\}}
-\def\PYGZca{\char`\^}
-\def\PYGZam{\char`\&}
-\def\PYGZlt{\char`\<}
-\def\PYGZgt{\char`\>}
-\def\PYGZsh{\char`\#}
-\def\PYGZpc{\char`\%}
-\def\PYGZdl{\char`\$}
-\def\PYGZhy{\char`\-}
-\def\PYGZsq{\char`\'}
-\def\PYGZdq{\char`\"}
-\def\PYGZti{\char`\~}
-% for compatibility with earlier versions
-\def\PYGZat{@}
-\def\PYGZlb{[}
-\def\PYGZrb{]}
-\makeatother
-
-\renewcommand\PYGZsq{\textquotesingle}
diff --git a/documentation/Sphinx/build/latex/sphinxhowto.cls b/documentation/Sphinx/build/latex/sphinxhowto.cls
deleted file mode 100644
index 6e4858567ab540bab81c2ef935a47296246a4484..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinxhowto.cls
+++ /dev/null
@@ -1,90 +0,0 @@
-%
-% sphinxhowto.cls for Sphinx (http://sphinx-doc.org/)
-%
-
-\NeedsTeXFormat{LaTeX2e}[1995/12/01]
-\ProvidesClass{sphinxhowto}[2018/12/22 v1.8.3 Document class (Sphinx howto)]
-
-% 'oneside' option overriding the 'twoside' default
-\newif\if@oneside
-\DeclareOption{oneside}{\@onesidetrue}
-% Pass remaining document options to the parent class.
-\DeclareOption*{\PassOptionsToClass{\CurrentOption}{\sphinxdocclass}}
-\ProcessOptions\relax
-
-% Default to two-side document
-\if@oneside
-% nothing to do (oneside is the default)
-\else
-\PassOptionsToClass{twoside}{\sphinxdocclass}
-\fi
-
-\LoadClass{\sphinxdocclass}
-
-% Set some sane defaults for section numbering depth and TOC depth. You can
-% reset these counters in your preamble.
-%
-\setcounter{secnumdepth}{2}
-\setcounter{tocdepth}{2}% i.e. section and subsection
-
-% Change the title page to look a bit better, and fit in with the fncychap
-% ``Bjarne'' style a bit better.
-%
-\newcommand{\sphinxmaketitle}{%
- \noindent\rule{\textwidth}{1pt}\par
- \begingroup % for PDF information dictionary
- \def\endgraf{ }\def\and{\& }%
- \pdfstringdefDisableCommands{\def\\{, }}% overwrite hyperref setup
- \hypersetup{pdfauthor={\@author}, pdftitle={\@title}}%
- \endgroup
- \begin{flushright}
- \sphinxlogo
- \py@HeaderFamily
- {\Huge \@title }\par
- {\itshape\large \py@release \releaseinfo}\par
- \vspace{25pt}
- {\Large
- \begin{tabular}[t]{c}
- \@author
- \end{tabular}}\par
- \vspace{25pt}
- \@date \par
- \py@authoraddress \par
- \end{flushright}
- \@thanks
- \setcounter{footnote}{0}
- \let\thanks\relax\let\maketitle\relax
- %\gdef\@thanks{}\gdef\@author{}\gdef\@title{}
-}
-
-\newcommand{\sphinxtableofcontents}{
- \begingroup
- \parskip = 0mm
- \tableofcontents
- \endgroup
- \rule{\textwidth}{1pt}
- \vspace{12pt}
-}
-
-\pagenumbering{arabic}
-
-% Fix the bibliography environment to add an entry to the Table of
-% Contents.
-% For an article document class this environment is a section,
-% so no page break before it.
-%
-\newenvironment{sphinxthebibliography}[1]{%
- % \phantomsection % not needed here since TeXLive 2010's hyperref
- \begin{thebibliography}{#1}%
- \addcontentsline{toc}{section}{\ifdefined\refname\refname\else\ifdefined\bibname\bibname\fi\fi}}{\end{thebibliography}}
-
-
-% Same for the indices.
-% The memoir class already does this, so we don't duplicate it in that case.
-%
-\@ifclassloaded{memoir}
- {\newenvironment{sphinxtheindex}{\begin{theindex}}{\end{theindex}}}
- {\newenvironment{sphinxtheindex}{%
- \phantomsection % needed because no chapter, section, ... is created by theindex
- \begin{theindex}%
- \addcontentsline{toc}{section}{\indexname}}{\end{theindex}}}
diff --git a/documentation/Sphinx/build/latex/sphinxmanual.cls b/documentation/Sphinx/build/latex/sphinxmanual.cls
deleted file mode 100644
index 1ab80d2643c27634bc5be4e7457fbfe689786a47..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinxmanual.cls
+++ /dev/null
@@ -1,114 +0,0 @@
-%
-% sphinxmanual.cls for Sphinx (http://sphinx-doc.org/)
-%
-
-\NeedsTeXFormat{LaTeX2e}[1995/12/01]
-\ProvidesClass{sphinxmanual}[2018/12/22 v1.8.3 Document class (Sphinx manual)]
-
-% chapters starting at odd pages (overridden by 'openany' document option)
-\PassOptionsToClass{openright}{\sphinxdocclass}
-
-% 'oneside' option overriding the 'twoside' default
-\newif\if@oneside
-\DeclareOption{oneside}{\@onesidetrue}
-% Pass remaining document options to the parent class.
-\DeclareOption*{\PassOptionsToClass{\CurrentOption}{\sphinxdocclass}}
-\ProcessOptions\relax
-
-% Defaults two-side document
-\if@oneside
-% nothing to do (oneside is the default)
-\else
-\PassOptionsToClass{twoside}{\sphinxdocclass}
-\fi
-
-\LoadClass{\sphinxdocclass}
-
-% Set some sane defaults for section numbering depth and TOC depth. You can
-% reset these counters in your preamble.
-%
-\setcounter{secnumdepth}{2}
-\setcounter{tocdepth}{1}
-
-% Change the title page to look a bit better, and fit in with the fncychap
-% ``Bjarne'' style a bit better.
-%
-\newcommand{\sphinxmaketitle}{%
- \let\spx@tempa\relax
- \ifHy@pageanchor\def\spx@tempa{\Hy@pageanchortrue}\fi
- \hypersetup{pageanchor=false}% avoid duplicate destination warnings
- \begin{titlepage}%
- \let\footnotesize\small
- \let\footnoterule\relax
- \noindent\rule{\textwidth}{1pt}\par
- \begingroup % for PDF information dictionary
- \def\endgraf{ }\def\and{\& }%
- \pdfstringdefDisableCommands{\def\\{, }}% overwrite hyperref setup
- \hypersetup{pdfauthor={\@author}, pdftitle={\@title}}%
- \endgroup
- \begin{flushright}%
- \sphinxlogo
- \py@HeaderFamily
- {\Huge \@title \par}
- {\itshape\LARGE \py@release\releaseinfo \par}
- \vfill
- {\LARGE
- \begin{tabular}[t]{c}
- \@author
- \end{tabular}
- \par}
- \vfill\vfill
- {\large
- \@date \par
- \vfill
- \py@authoraddress \par
- }%
- \end{flushright}%\par
- \@thanks
- \end{titlepage}%
- \setcounter{footnote}{0}%
- \let\thanks\relax\let\maketitle\relax
- %\gdef\@thanks{}\gdef\@author{}\gdef\@title{}
- \clearpage
- \ifdefined\sphinxbackoftitlepage\sphinxbackoftitlepage\fi
- \if@openright\cleardoublepage\else\clearpage\fi
- \spx@tempa
-}
-
-\newcommand{\sphinxtableofcontents}{%
- \pagenumbering{roman}%
- \begingroup
- \parskip \z@skip
- \tableofcontents
- \endgroup
- % before resetting page counter, let's do the right thing.
- \if@openright\cleardoublepage\else\clearpage\fi
- \pagenumbering{arabic}%
-}
-
-% This is needed to get the width of the section # area wide enough in the
-% library reference. Doing it here keeps it the same for all the manuals.
-%
-\renewcommand*\l@section{\@dottedtocline{1}{1.5em}{2.6em}}
-\renewcommand*\l@subsection{\@dottedtocline{2}{4.1em}{3.5em}}
-
-% Fix the bibliography environment to add an entry to the Table of
-% Contents.
-% For a report document class this environment is a chapter.
-%
-\newenvironment{sphinxthebibliography}[1]{%
- \if@openright\cleardoublepage\else\clearpage\fi
- % \phantomsection % not needed here since TeXLive 2010's hyperref
- \begin{thebibliography}{#1}%
- \addcontentsline{toc}{chapter}{\bibname}}{\end{thebibliography}}
-
-% Same for the indices.
-% The memoir class already does this, so we don't duplicate it in that case.
-%
-\@ifclassloaded{memoir}
- {\newenvironment{sphinxtheindex}{\begin{theindex}}{\end{theindex}}}
- {\newenvironment{sphinxtheindex}{%
- \if@openright\cleardoublepage\else\clearpage\fi
- \phantomsection % needed as no chapter, section, ... created
- \begin{theindex}%
- \addcontentsline{toc}{chapter}{\indexname}}{\end{theindex}}}
diff --git a/documentation/Sphinx/build/latex/sphinxmulticell.sty b/documentation/Sphinx/build/latex/sphinxmulticell.sty
deleted file mode 100644
index f0d11b1f99a01f08b58ac273e10df5100f13babf..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/build/latex/sphinxmulticell.sty
+++ /dev/null
@@ -1,317 +0,0 @@
-\NeedsTeXFormat{LaTeX2e}
-\ProvidesPackage{sphinxmulticell}%
- [2017/02/23 v1.6 better span rows and columns of a table (Sphinx team)]%
-\DeclareOption*{\PackageWarning{sphinxmulticell}{Option `\CurrentOption' is unknown}}%
-\ProcessOptions\relax
-%
-% --- MULTICOLUMN ---
-% standard LaTeX's \multicolumn
-% 1. does not allow verbatim contents,
-% 2. interacts very poorly with tabulary.
-%
-% It is needed to write own macros for Sphinx: to allow code-blocks in merged
-% cells rendered by tabular/longtable, and to allow multi-column cells with
-% paragraphs to be taken into account sanely by tabulary algorithm for column
-% widths.
-%
-% This requires quite a bit of hacking. First, in Sphinx, the multi-column
-% contents will *always* be wrapped in a varwidth environment. The issue
-% becomes to pass it the correct target width. We must trick tabulary into
-% believing the multicolumn is simply separate columns, else tabulary does not
-% incorporate the contents in its algorithm. But then we must clear the
-% vertical rules...
-%
-% configuration of tabulary
-\setlength{\tymin}{3\fontcharwd\font`0 }% minimal width of "squeezed" columns
-\setlength{\tymax}{10000pt}% allow enough room for paragraphs to "compete"
-% we need access to tabulary's final computed width. \@tempdima is too volatile
-% to hope it has kept tabulary's value when \sphinxcolwidth needs it.
-\newdimen\sphinx@TY@tablewidth
-\def\tabulary{%
- \def\TY@final{\sphinx@TY@tablewidth\@tempdima\tabular}%
- \let\endTY@final\endtabular
- \TY@tabular}%
-% next hack is needed only if user has set latex_use_latex_multicolumn to True:
-% it fixes tabulary's bug with \multicolumn defined "short" in first pass. (if
-% upstream tabulary adds a \long, our extra one causes no harm)
-\def\sphinx@tempa #1\def\multicolumn#2#3#4#5#6#7#8#9\sphinx@tempa
- {\def\TY@tab{#1\long\def\multicolumn####1####2####3{\multispan####1\relax}#9}}%
-\expandafter\sphinx@tempa\TY@tab\sphinx@tempa
-%
-% TN. 1: as \omit is never executed, Sphinx multicolumn does not need to worry
-% like standard multicolumn about |l| vs l|. On the other hand it assumes
-% columns are separated by a | ... (if not it will add extraneous
-% \arrayrulewidth space for each column separation in its estimate of available
-% width).
-%
-% TN. 1b: as Sphinx multicolumn uses neither \omit nor \span, it can not
-% (easily) get rid of extra macros from >{...} or <{...} between columns. At
-% least, it has been made compatible with colortbl's \columncolor.
-%
-% TN. 2: tabulary's second pass is handled like tabular/longtable's single
-% pass, with the difference that we hacked \TY@final to set in
-% \sphinx@TY@tablewidth the final target width as computed by tabulary. This is
-% needed only to handle columns with a "horizontal" specifier: "p" type columns
-% (inclusive of tabulary's LJRC) holds the target column width in the
-% \linewidth dimension.
-%
-% TN. 3: use of \begin{sphinxmulticolumn}...\end{sphinxmulticolumn} mark-up
-% would need some hacking around the fact that groups can not span across table
-% cells (the code does inserts & tokens, see TN1b). It was decided to keep it
-% simple with \sphinxstartmulticolumn...\sphinxstopmulticolumn.
-%
-% MEMO about nesting: if sphinxmulticolumn is encountered in a nested tabular
-% inside a tabulary it will think to be at top level in the tabulary. But
-% Sphinx generates no nested tables, and if some LaTeX macro uses internally a
-% tabular this will not have a \sphinxstartmulticolumn within it!
-%
-\def\sphinxstartmulticolumn{%
- \ifx\equation$% $ tabulary's first pass
- \expandafter\sphinx@TYI@start@multicolumn
- \else % either not tabulary or tabulary's second pass
- \expandafter\sphinx@start@multicolumn
- \fi
-}%
-\def\sphinxstopmulticolumn{%
- \ifx\equation$% $ tabulary's first pass
- \expandafter\sphinx@TYI@stop@multicolumn
- \else % either not tabulary or tabulary's second pass
- \ignorespaces
- \fi
-}%
-\def\sphinx@TYI@start@multicolumn#1{%
- % use \gdef always to avoid stack space build up
- \gdef\sphinx@tempa{#1}\begingroup\setbox\z@\hbox\bgroup
-}%
-\def\sphinx@TYI@stop@multicolumn{\egroup % varwidth was used with \tymax
- \xdef\sphinx@tempb{\the\dimexpr\wd\z@/\sphinx@tempa}% per column width
- \endgroup
- \expandafter\sphinx@TYI@multispan\expandafter{\sphinx@tempa}%
-}%
-\def\sphinx@TYI@multispan #1{%
- \kern\sphinx@tempb\ignorespaces % the per column occupied width
- \ifnum#1>\@ne % repeat, taking into account subtleties of TeX's & ...
- \expandafter\sphinx@TYI@multispan@next\expandafter{\the\numexpr#1-\@ne\expandafter}%
- \fi
-}%
-\def\sphinx@TYI@multispan@next{&\relax\sphinx@TYI@multispan}%
-%
-% Now the branch handling either the second pass of tabulary or the single pass
-% of tabular/longtable. This is the delicate part where we gather the
-% dimensions from the p columns either set-up by tabulary or by user p column
-% or Sphinx \X, \Y columns. The difficulty is that to get the said width, the
-% template must be inserted (other hacks would be horribly complicated except
-% if we rewrote crucial parts of LaTeX's \@array !) and we can not do
-% \omit\span like standard \multicolumn's easy approach. Thus we must cancel
-% the \vrule separators. Also, perhaps the column specifier is of the l, c, r
-% type, then we attempt an ad hoc rescue to give varwidth a reasonable target
-% width.
-\def\sphinx@start@multicolumn#1{%
- \gdef\sphinx@multiwidth{0pt}\gdef\sphinx@tempa{#1}\sphinx@multispan{#1}%
-}%
-\def\sphinx@multispan #1{%
- \ifnum#1=\@ne\expandafter\sphinx@multispan@end
- \else\expandafter\sphinx@multispan@next
- \fi {#1}%
-}%
-\def\sphinx@multispan@next #1{%
- % trick to recognize L, C, R, J or p, m, b type columns
- \ifdim\baselineskip>\z@
- \gdef\sphinx@tempb{\linewidth}%
- \else
- % if in an l, r, c type column, try and hope for the best
- \xdef\sphinx@tempb{\the\dimexpr(\ifx\TY@final\@undefined\linewidth\else
- \sphinx@TY@tablewidth\fi-\arrayrulewidth)/\sphinx@tempa
- -\tw@\tabcolsep-\arrayrulewidth\relax}%
- \fi
- \noindent\kern\sphinx@tempb\relax
- \xdef\sphinx@multiwidth
- {\the\dimexpr\sphinx@multiwidth+\sphinx@tempb+\tw@\tabcolsep+\arrayrulewidth}%
- % hack the \vline and the colortbl macros
- \sphinx@hack@vline\sphinx@hack@CT&\relax
- % repeat
- \expandafter\sphinx@multispan\expandafter{\the\numexpr#1-\@ne}%
-}%
-% packages like colortbl add group levels, we need to "climb back up" to be
-% able to hack the \vline and also the colortbl inserted tokens. This creates
-% empty space whether or not the columns were | separated:
-\def\sphinx@hack@vline{\ifnum\currentgrouptype=6\relax
- \kern\arrayrulewidth\arrayrulewidth\z@\else\aftergroup\sphinx@hack@vline\fi}%
-\def\sphinx@hack@CT{\ifnum\currentgrouptype=6\relax
- \let\CT@setup\sphinx@CT@setup\else\aftergroup\sphinx@hack@CT\fi}%
-% It turns out \CT@row@color is not expanded contrarily to \CT@column@color
-% during LaTeX+colortbl preamble preparation, hence it would be possible for
-% \sphinx@CT@setup to discard only the column color and choose to obey or not
-% row color and cell color. It would even be possible to propagate cell color
-% to row color for the duration of the Sphinx multicolumn... the (provisional?)
-% choice has been made to cancel the colortbl colours for the multicolumn
-% duration.
-\def\sphinx@CT@setup #1\endgroup{\endgroup}% hack to remove colour commands
-\def\sphinx@multispan@end#1{%
- % first, trace back our steps horizontally
- \noindent\kern-\dimexpr\sphinx@multiwidth\relax
- % and now we set the final computed width for the varwidth environment
- \ifdim\baselineskip>\z@
- \xdef\sphinx@multiwidth{\the\dimexpr\sphinx@multiwidth+\linewidth}%
- \else
- \xdef\sphinx@multiwidth{\the\dimexpr\sphinx@multiwidth+
- (\ifx\TY@final\@undefined\linewidth\else
- \sphinx@TY@tablewidth\fi-\arrayrulewidth)/\sphinx@tempa
- -\tw@\tabcolsep-\arrayrulewidth\relax}%
- \fi
- % we need to remove colour set-up also for last cell of the multi-column
- \aftergroup\sphinx@hack@CT
-}%
-\newcommand*\sphinxcolwidth[2]{%
- % this dimension will always be used for varwidth, and serves as maximum
- % width when cells are merged either via multirow or multicolumn or both,
- % as always their contents is wrapped in varwidth environment.
- \ifnum#1>\@ne % multi-column (and possibly also multi-row)
- % we wrote our own multicolumn code especially to handle that (and allow
- % verbatim contents)
- \ifx\equation$%$
- \tymax % first pass of tabulary (cf MEMO above regarding nesting)
- \else % the \@gobble thing is for compatibility with standard \multicolumn
- \sphinx@multiwidth\@gobble{#1/#2}%
- \fi
- \else % single column multirow
- \ifx\TY@final\@undefined % not a tabulary.
- \ifdim\baselineskip>\z@
- % in a p{..} type column, \linewidth is the target box width
- \linewidth
- \else
- % l, c, r columns. Do our best.
- \dimexpr(\linewidth-\arrayrulewidth)/#2-
- \tw@\tabcolsep-\arrayrulewidth\relax
- \fi
- \else % in tabulary
- \ifx\equation$%$% first pass
- \tymax % it is set to a big value so that paragraphs can express themselves
- \else
- % second pass.
- \ifdim\baselineskip>\z@
- \linewidth % in a L, R, C, J column or a p, \X, \Y ...
- \else
- % we have hacked \TY@final to put in \sphinx@TY@tablewidth the table width
- \dimexpr(\sphinx@TY@tablewidth-\arrayrulewidth)/#2-
- \tw@\tabcolsep-\arrayrulewidth\relax
- \fi
- \fi
- \fi
- \fi
-}%
-% fallback default in case user has set latex_use_latex_multicolumn to True:
-% \sphinxcolwidth will use this only inside LaTeX's standard \multicolumn
-\def\sphinx@multiwidth #1#2{\dimexpr % #1 to gobble the \@gobble (!)
- (\ifx\TY@final\@undefined\linewidth\else\sphinx@TY@tablewidth\fi
- -\arrayrulewidth)*#2-\tw@\tabcolsep-\arrayrulewidth\relax}%
-%
-% --- MULTIROW ---
-% standard \multirow
-% 1. does not allow verbatim contents,
-% 2. does not allow blank lines in its argument,
-% 3. its * specifier means to typeset "horizontally" which is very
-% bad for paragraph content. 2016 version has = specifier but it
-% must be used with p type columns only, else results are bad,
-% 4. it requires manual intervention if the contents is too long to fit
-% in the asked-for number of rows.
-% 5. colour panels (either from \rowcolor or \columncolor) will hide
-% the bottom part of multirow text, hence manual tuning is needed
-% to put the multirow insertion at the _bottom_.
-%
-% The Sphinx solution consists in always having contents wrapped
-% in a varwidth environment so that it makes sense to estimate how many
-% lines it will occupy, and then ensure by insertion of suitable struts
-% that the table rows have the needed height. The needed mark-up is done
-% by LaTeX writer, which has its own id for the merged cells.
-%
-% The colour issue is solved by clearing colour panels in all cells,
-% whether or not the multirow is single-column or multi-column.
-%
-% In passing we obtain baseline alignements across rows (only if
-% \arraylinestretch is 1, as LaTeX's does not obey \arraylinestretch in "p"
-% multi-line contents, only first and last line...)
-%
-% TODO: examine the situation with \arraylinestretch > 1. The \extrarowheight
-% is hopeless for multirow anyhow, it makes baseline alignment strictly
-% impossible.
-\newcommand\sphinxmultirow[2]{\begingroup
- % #1 = nb of spanned rows, #2 = Sphinx id of "cell", #3 = contents
- % but let's fetch #3 in a way allowing verbatim contents !
- \def\sphinx@nbofrows{#1}\def\sphinx@cellid{#2}%
- \afterassignment\sphinx@multirow\let\next=
-}%
-\def\sphinx@multirow {%
- \setbox\z@\hbox\bgroup\aftergroup\sphinx@@multirow\strut
-}%
-\def\sphinx@@multirow {%
- % The contents, which is a varwidth environment, has been captured in
- % \box0 (a \hbox).
- % We have with \sphinx@cellid an assigned unique id. The goal is to give
- % about the same height to all the involved rows.
- % For this Sphinx will insert a \sphinxtablestrut{cell_id} mark-up
- % in LaTeX file and the expansion of the latter will do the suitable thing.
- \dimen@\dp\z@
- \dimen\tw@\ht\@arstrutbox
- \advance\dimen@\dimen\tw@
- \advance\dimen\tw@\dp\@arstrutbox
- \count@=\dimen@ % type conversion dim -> int
- \count\tw@=\dimen\tw@
- \divide\count@\count\tw@ % TeX division truncates
- \advance\dimen@-\count@\dimen\tw@
- % 1300sp is about 0.02pt. For comparison a rule default width is 0.4pt.
- % (note that if \count@ holds 0, surely \dimen@>1300sp)
- \ifdim\dimen@>1300sp \advance\count@\@ne \fi
- % now \count@ holds the count L of needed "lines"
- % and \sphinx@nbofrows holds the number N of rows
- % we have L >= 1 and N >= 1
- % if L is a multiple of N, ... clear what to do !
- % else write L = qN + r, 1 <= r < N and we will
- % arrange for each row to have enough space for:
- % q+1 "lines" in each of the first r rows
- % q "lines" in each of the (N-r) bottom rows
- % for a total of (q+1) * r + q * (N-r) = q * N + r = L
- % It is possible that q == 0.
- \count\tw@\count@
- % the TeX division truncates
- \divide\count\tw@\sphinx@nbofrows\relax
- \count4\count\tw@ % q
- \multiply\count\tw@\sphinx@nbofrows\relax
- \advance\count@-\count\tw@ % r
- \expandafter\xdef\csname sphinx@tablestrut_\sphinx@cellid\endcsname
- {\noexpand\sphinx@tablestrut{\the\count4}{\the\count@}{\sphinx@cellid}}%
- \dp\z@\z@
- % this will use the real height if it is >\ht\@arstrutbox
- \sphinxtablestrut{\sphinx@cellid}\box\z@
- \endgroup % group was opened in \sphinxmultirow
-}%
-\newcommand*\sphinxtablestrut[1]{%
- % #1 is a "cell_id", i.e. the id of a merged group of table cells
- \csname sphinx@tablestrut_#1\endcsname
-}%
-% LaTeX typesets the table row by row, hence each execution can do
-% an update for the next row.
-\newcommand*\sphinx@tablestrut[3]{\begingroup
- % #1 = q, #2 = (initially) r, #3 = cell_id, q+1 lines in first r rows
- % if #2 = 0, create space for max(q,1) table lines
- % if #2 > 0, create space for q+1 lines and decrement #2
- \leavevmode
- \count@#1\relax
- \ifnum#2=\z@
- \ifnum\count@=\z@\count@\@ne\fi
- \else
- % next row will be with a #2 decremented by one
- \expandafter\xdef\csname sphinx@tablestrut_#3\endcsname
- {\noexpand\sphinx@tablestrut{#1}{\the\numexpr#2-\@ne}{#3}}%
- \advance\count@\@ne
- \fi
- \vrule\@height\ht\@arstrutbox
- \@depth\dimexpr\count@\ht\@arstrutbox+\count@\dp\@arstrutbox-\ht\@arstrutbox\relax
- \@width\z@
- \endgroup
- % we need this to avoid colour panels hiding bottom parts of multirow text
- \sphinx@hack@CT
-}%
-\endinput
-%%
-%% End of file `sphinxmulticell.sty'.
diff --git a/documentation/Sphinx/source/.idea/workspace.xml b/documentation/Sphinx/source/.idea/workspace.xml
deleted file mode 100644
index b332ce309defc5e9df7fde3f6f362f746d58ca08..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/.idea/workspace.xml
+++ /dev/null
@@ -1,215 +0,0 @@
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+++ /dev/null
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-Downloads
-=========
-
-Describe download options of flex_extract ....
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- downloads/tar_balls
- downloads/git_repo
- downloads/history_changes
-
\ No newline at end of file
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-Git Repository
-==============
-
- UNDER CONSTRUCTION
\ No newline at end of file
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-History of Changes
-==================
-
- UNDER CONSTRUCTION
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-Download tar-balls
-==================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/index.rst b/documentation/Sphinx/source/index.rst
deleted file mode 100644
index 2d9417fe276087c78da12959e568908e02269e86..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/index.rst
+++ /dev/null
@@ -1,120 +0,0 @@
-.. flex_extract documentation master file, created by
- sphinx-quickstart on Wed Oct 17 18:39:05 2018.
- You can adapt this file completely to your liking, but it should at least
- contain the root `toctree` directive.
-
-Welcome to flex_extract's user documentation!
-=============================================
-
-flex_extract is a software to retrieve meteorological fields from the European Centre for Medium-Range Weather Forecasts (ECMWF) Mars archive to server as input files for the FLEXTRA/FLEXPART Atmospheric Transport Modelling system.
-
-
-.. The scripts can be 1) executed locally using the ECMWF WebMARS interface, or 2) on the ECMWF member
-.. state gateway server or HPC facility using the ecaccess software package. As another option the scripts can 3)
-.. also be triggered using ecflow scheduling software used by ECMWF for data dissemination.
-
-All third-party software and libraries required by flex_extract are open source and free of charge.
-
-.. raw:: html
-
- <table style="width:100%;">
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/download_icon.png">
- </div>
- <h2>Downloads</h2>
- <ul>
- <li><a href="">Download Tar-ball</a></li>
- <li><a href="">Git repository</a></li>
- <li><a href="">History of Changes</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:125px;vertical-align: bottom;" src="_static/prog_icon.png">
- </div>
- <h2>Program Structure</h2>
- <ul>
- <li><a href="">Overview</a></li>
- <li><a href="">Program components</a></li>
- <li><a href="">Program flow</a></li>
- </ul>
- </td>
- </tr>
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/install_icon.png">
- </div>
- <h2>Installation</h2>
- <ul>
- <li><a href="requirements.html">Requirements</a></li>
- <li><a href="">Different operation modes</a></li>
- <li><a href="">Test the installation</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/guide_icon.png">
- </div>
- <h2>User Guide</h2>
- <ul>
- <li><a href="">How to use</a></li>
- <li><a href="">Control templates</a></li>
- </ul>
- </td>
- </tr>
- <tr>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:125px;vertical-align: bottom;" src="_static/api_icon.png">
- </div>
- <h2>API Index</h2>
- <ul>
- <li><a href="">Construction</a></li>
- </ul>
- </td>
- <td style="width:200px;height:150px;">
- <div style="width:200px;height:100px;">
- <img style="width:100px;vertical-align: bottom;" src="_static/help_icon.png">
- </div>
- <h2>Support</h2>
- <ul>
- <li><a href="">Ticket system</a></li>
- <li><a href="">Mailing list</a></li>
- <li><a href="">Known bugs or issues</a></li>
- <li><a href="">FAQ</a></li>
- </ul>
- </td>
- </tr>
- </table>
- <p></p>
-
-.. note::
-
- ![][/documentation/Sphinx/source/_static/cc-by-40.png]
- This work is licensed under the Creative Commons Attribution 4.0
- International License. To view a copy of this license, visit
- http://creativecommons.org/licenses/by/4.0/ or send a letter to
- Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-
-.. toctree::
- :maxdepth: 3
- :caption: Table of Contents:
-
- downloads
- installation
- program_structure
- user_guide
- api
- support
-
-
-Indices and tables
-==================
-
-* :ref:`genindex`
-* :ref:`modindex`
-* :ref:`search`
-
diff --git a/documentation/Sphinx/source/installation.rst b/documentation/Sphinx/source/installation.rst
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-Installation
-============
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- installation/requirements
- installation/oper_modes
- installation/test_install
-
-
-
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-Operating modes
-===============
-
-
- UNDER CONSTRUCTION
-
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deleted file mode 100644
index c1bae21176f9c5855a165a08b99cfe1f1cb01fe2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/installation/requirements.rst
+++ /dev/null
@@ -1,6 +0,0 @@
-Requirements
-============
-
-
- UNDER CONSTRUCTION
-
diff --git a/documentation/Sphinx/source/installation/test_install.rst b/documentation/Sphinx/source/installation/test_install.rst
deleted file mode 100644
index 25430881a2b41b06f46aad93f1fa4d2157f7315d..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/installation/test_install.rst
+++ /dev/null
@@ -1,5 +0,0 @@
-Installation test
-=================
-
- UNDER CONSTRUCTION
-
\ No newline at end of file
diff --git a/documentation/Sphinx/source/program_structure.rst b/documentation/Sphinx/source/program_structure.rst
deleted file mode 100644
index 991b373c30c6cb629680d3eb2337566a68d92746..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/program_structure.rst
+++ /dev/null
@@ -1,14 +0,0 @@
-Program Structure
-=================
-
-Describe structure of flex_extract ....
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- program_structure/prog_overview
- program_structure/prog_components
- program_structure/prog_flow
diff --git a/documentation/Sphinx/source/program_structure/prog_components.rst b/documentation/Sphinx/source/program_structure/prog_components.rst
deleted file mode 100644
index 0c7d560623a755cc2f92eaba094ae5a1d1094f77..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/program_structure/prog_components.rst
+++ /dev/null
@@ -1,5 +0,0 @@
-Program Components
-==================
-
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/program_structure/prog_overview.rst b/documentation/Sphinx/source/program_structure/prog_overview.rst
deleted file mode 100644
index 15cb629d2847122e0021ca03767d8940f52a07ca..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/program_structure/prog_overview.rst
+++ /dev/null
@@ -1,5 +0,0 @@
-Program Overview
-================
-
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/support.rst b/documentation/Sphinx/source/support.rst
deleted file mode 100644
index bccf1bf4a00443f53bbeb9067a04d656a6498bde..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/support.rst
+++ /dev/null
@@ -1,16 +0,0 @@
-Support
-=======
-
-
- UNDER CONSTRUCTION
-
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- support/ticket_system
- support/mailing_list
- support/known_bugs_issues
- support/faq
-
\ No newline at end of file
diff --git a/documentation/Sphinx/source/support/faq.rst b/documentation/Sphinx/source/support/faq.rst
deleted file mode 100644
index ccfe36a63439c496b8e05036df36d02d6e2588b7..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/support/faq.rst
+++ /dev/null
@@ -1,4 +0,0 @@
-FAQ - Frequently asked questions
-================================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/support/mailing_list.rst b/documentation/Sphinx/source/support/mailing_list.rst
deleted file mode 100644
index e0f50126f9bc64b38a174a1adc31200faee7d1e8..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/support/mailing_list.rst
+++ /dev/null
@@ -1,4 +0,0 @@
-Mailing Lists
-=============
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/support/ticket_system.rst b/documentation/Sphinx/source/support/ticket_system.rst
deleted file mode 100644
index 58b73a6ced4ae84106553d0a72e15dc9749e4ea7..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/support/ticket_system.rst
+++ /dev/null
@@ -1,4 +0,0 @@
-Ticket System
-=============
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/user_guide.rst b/documentation/Sphinx/source/user_guide.rst
deleted file mode 100644
index 4fe6dc0befd49df56a1969e7cc713ebcce95cdf2..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/user_guide.rst
+++ /dev/null
@@ -1,12 +0,0 @@
-User Guide
-==========
-
- UNDER CONSTRUCTION
-
-.. toctree::
- :hidden:
- :maxdepth: 2
-
- user_guide/how_to
- user_guide/control_templates
-
\ No newline at end of file
diff --git a/documentation/Sphinx/source/user_guide/control_templates.rst b/documentation/Sphinx/source/user_guide/control_templates.rst
deleted file mode 100644
index ccd58c5244ef8d41ffca4b974fcd9657f0d4ecfc..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/user_guide/control_templates.rst
+++ /dev/null
@@ -1,4 +0,0 @@
-CONTROL-file templates
-======================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/source/user_guide/how_to.rst b/documentation/Sphinx/source/user_guide/how_to.rst
deleted file mode 100644
index 7e041b4e1071ef3d540c222051a773069a02af94..0000000000000000000000000000000000000000
--- a/documentation/Sphinx/source/user_guide/how_to.rst
+++ /dev/null
@@ -1,4 +0,0 @@
-How to use flex_extract
-=======================
-
- UNDER CONSTRUCTION
\ No newline at end of file
diff --git a/documentation/Sphinx/Makefile b/for_developers/Sphinx/Makefile
similarity index 93%
rename from documentation/Sphinx/Makefile
rename to for_developers/Sphinx/Makefile
index 4a2ad15e260a0017ae2e66e767670399ebcd2312..9bade62a9c10d2cfc5f2734ea9071632c024118e 100644
--- a/documentation/Sphinx/Makefile
+++ b/for_developers/Sphinx/Makefile
@@ -6,7 +6,7 @@ SPHINXOPTS =
SPHINXBUILD = sphinx-build
SPHINXPROJ = flex_extract
SOURCEDIR = source
-BUILDDIR = build
+BUILDDIR = ../../documentation
# Put it first so that "make" without argument is like "make help".
help:
@@ -17,4 +17,4 @@ help:
# Catch-all target: route all unknown targets to Sphinx using the new
# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS).
%: Makefile
- @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
\ No newline at end of file
+ @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O)
diff --git a/documentation/Sphinx/source/.idea/encodings.xml b/for_developers/Sphinx/source/.idea/encodings.xml
similarity index 100%
rename from documentation/Sphinx/source/.idea/encodings.xml
rename to for_developers/Sphinx/source/.idea/encodings.xml
diff --git a/documentation/Sphinx/source/.idea/libraries/R_User_Library.xml b/for_developers/Sphinx/source/.idea/libraries/R_User_Library.xml
similarity index 100%
rename from documentation/Sphinx/source/.idea/libraries/R_User_Library.xml
rename to for_developers/Sphinx/source/.idea/libraries/R_User_Library.xml
diff --git a/documentation/Sphinx/source/.idea/misc.xml b/for_developers/Sphinx/source/.idea/misc.xml
similarity index 100%
rename from documentation/Sphinx/source/.idea/misc.xml
rename to for_developers/Sphinx/source/.idea/misc.xml
diff --git a/documentation/Sphinx/source/.idea/modules.xml b/for_developers/Sphinx/source/.idea/modules.xml
similarity index 100%
rename from documentation/Sphinx/source/.idea/modules.xml
rename to for_developers/Sphinx/source/.idea/modules.xml
diff --git a/documentation/Sphinx/source/.idea/source.iml b/for_developers/Sphinx/source/.idea/source.iml
similarity index 100%
rename from documentation/Sphinx/source/.idea/source.iml
rename to for_developers/Sphinx/source/.idea/source.iml
diff --git a/documentation/Sphinx/source/.idea/vcs.xml b/for_developers/Sphinx/source/.idea/vcs.xml
similarity index 100%
rename from documentation/Sphinx/source/.idea/vcs.xml
rename to for_developers/Sphinx/source/.idea/vcs.xml
diff --git a/for_developers/Sphinx/source/.idea/workspace.xml b/for_developers/Sphinx/source/.idea/workspace.xml
new file mode 100644
index 0000000000000000000000000000000000000000..8357804bea5dfefcaaef067d3d42aee604790467
--- /dev/null
+++ b/for_developers/Sphinx/source/.idea/workspace.xml
@@ -0,0 +1,177 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project version="4">
+ <component name="ChangeListManager">
+ <list default="true" id="2a15728f-bfbe-476a-b119-bc85c479ce08" name="Default Changelist" comment="">
+ <change beforePath="$PROJECT_DIR$/../../../README.md" beforeDir="false" afterPath="$PROJECT_DIR$/../../../README.md" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/.idea/workspace.xml" beforeDir="false" afterPath="$PROJECT_DIR$/.idea/workspace.xml" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/conf.py" beforeDir="false" afterPath="$PROJECT_DIR$/conf.py" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/index.rst" beforeDir="false" afterPath="$PROJECT_DIR$/index.rst" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/program_structure/prog_overview.rst" beforeDir="false" afterPath="$PROJECT_DIR$/program_structure/prog_overview.rst" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../for_developers/CONTROLparameter.xlsx" beforeDir="false" afterPath="$PROJECT_DIR$/../../../for_developers/CONTROLparameter.xlsx" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/control/CONTROL_CERA.testgrid" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/control/CONTROL_CERA.testgrid" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/control/CONTROL_EA5.newgrid" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/control/CONTROL_EA5.newgrid" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/control/CONTROL_EA5.testgrid" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/control/CONTROL_EA5.testgrid" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/control/CONTROL_FC.pure.36hours.testgrid" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/control/CONTROL_FC.pure.36hours.testgrid" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/run.sh" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/run.sh" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../run/run_local.sh" beforeDir="false" afterPath="$PROJECT_DIR$/../../../run/run_local.sh" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../source/fortran/Makefile.gfortran" beforeDir="false" afterPath="$PROJECT_DIR$/../../../source/fortran/Makefile.gfortran" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../source/fortran/Makefile.local.gfortran" beforeDir="false" afterPath="$PROJECT_DIR$/../../../source/fortran/Makefile.local.gfortran" afterDir="false" />
+ <change beforePath="$PROJECT_DIR$/../../../source/fortran/Makefile.local.ifort" beforeDir="false" afterPath="$PROJECT_DIR$/../../../source/fortran/Makefile.local.ifort" afterDir="false" />
+ </list>
+ <option name="EXCLUDED_CONVERTED_TO_IGNORED" value="true" />
+ <option name="SHOW_DIALOG" value="false" />
+ <option name="HIGHLIGHT_CONFLICTS" value="true" />
+ <option name="HIGHLIGHT_NON_ACTIVE_CHANGELIST" value="false" />
+ <option name="LAST_RESOLUTION" value="IGNORE" />
+ </component>
+ <component name="FileEditorManager">
+ <leaf SIDE_TABS_SIZE_LIMIT_KEY="300">
+ <file pinned="false" current-in-tab="false">
+ <entry file="file://$PROJECT_DIR$/index.rst">
+ <provider selected="true" editor-type-id="restructured-text-editor" />
+ </entry>
+ </file>
+ <file pinned="false" current-in-tab="true">
+ <entry file="file://$PROJECT_DIR$/../../../README.md">
+ <provider selected="true" editor-type-id="split-provider[text-editor;markdown-preview-editor]">
+ <state split_layout="SPLIT">
+ <first_editor relative-caret-position="631">
+ <caret line="492" column="177" selection-start-line="492" selection-start-column="132" selection-end-line="492" selection-end-column="181" />
+ <folding>
+ <element signature="e#11390#11416#0" />
+ <element signature="e#18917#18937#0" />
+ <element signature="e#19186#19204#0" />
+ </folding>
+ </first_editor>
+ <second_editor />
+ </state>
+ </provider>
+ </entry>
+ </file>
+ </leaf>
+ </component>
+ <component name="Git.Settings">
+ <option name="RECENT_GIT_ROOT_PATH" value="$PROJECT_DIR$/../../.." />
+ </component>
+ <component name="IdeDocumentHistory">
+ <option name="CHANGED_PATHS">
+ <list>
+ <option value="$PROJECT_DIR$/../../../README.md" />
+ </list>
+ </option>
+ </component>
+ <component name="ProjectFrameBounds" extendedState="1">
+ <option name="x" value="1680" />
+ <option name="y" value="60" />
+ <option name="width" value="1920" />
+ <option name="height" value="1113" />
+ </component>
+ <component name="ProjectLevelVcsManager" settingsEditedManually="true" />
+ <component name="ProjectView">
+ <navigator proportions="" version="1">
+ <foldersAlwaysOnTop value="true" />
+ </navigator>
+ <panes>
+ <pane id="ProjectPane">
+ <subPane>
+ <expand>
+ <path>
+ <item name="source" type="b2602c69:ProjectViewProjectNode" />
+ <item name="source" type="462c0819:PsiDirectoryNode" />
+ </path>
+ <path>
+ <item name="source" type="b2602c69:ProjectViewProjectNode" />
+ <item name="source" type="462c0819:PsiDirectoryNode" />
+ <item name="_static" type="462c0819:PsiDirectoryNode" />
+ </path>
+ </expand>
+ <select />
+ </subPane>
+ </pane>
+ <pane id="Scope" />
+ </panes>
+ </component>
+ <component name="PropertiesComponent">
+ <property name="last_opened_file_path" value="$PROJECT_DIR$" />
+ <property name="settings.editor.selected.configurable" value="File.Encoding" />
+ </component>
+ <component name="RunDashboard">
+ <option name="ruleStates">
+ <list>
+ <RuleState>
+ <option name="name" value="ConfigurationTypeDashboardGroupingRule" />
+ </RuleState>
+ <RuleState>
+ <option name="name" value="StatusDashboardGroupingRule" />
+ </RuleState>
+ </list>
+ </option>
+ </component>
+ <component name="SvnConfiguration">
+ <configuration />
+ </component>
+ <component name="TaskManager">
+ <task active="true" id="Default" summary="Default task">
+ <changelist id="2a15728f-bfbe-476a-b119-bc85c479ce08" name="Default Changelist" comment="" />
+ <created>1551958821849</created>
+ <option name="number" value="Default" />
+ <option name="presentableId" value="Default" />
+ <updated>1551958821849</updated>
+ </task>
+ <servers />
+ </component>
+ <component name="TodoView">
+ <todo-panel id="selected-file">
+ <is-autoscroll-to-source value="true" />
+ </todo-panel>
+ <todo-panel id="all">
+ <are-packages-shown value="true" />
+ <is-autoscroll-to-source value="true" />
+ </todo-panel>
+ </component>
+ <component name="ToolWindowManager">
+ <frame x="1680" y="60" width="1920" height="1113" extended-state="0" />
+ <editor active="true" />
+ <layout>
+ <window_info content_ui="combo" id="Project" order="0" visible="true" weight="0.046375267" />
+ <window_info id="Structure" order="1" side_tool="true" weight="0.25" />
+ <window_info id="Favorites" order="2" side_tool="true" />
+ <window_info anchor="bottom" id="Message" order="0" />
+ <window_info anchor="bottom" id="Find" order="1" />
+ <window_info anchor="bottom" id="Run" order="2" />
+ <window_info anchor="bottom" id="Debug" order="3" weight="0.4" />
+ <window_info anchor="bottom" id="Cvs" order="4" weight="0.25" />
+ <window_info anchor="bottom" id="Inspection" order="5" weight="0.4" />
+ <window_info anchor="bottom" id="TODO" order="6" weight="0.32936078" />
+ <window_info anchor="bottom" id="Version Control" order="7" weight="0.32936078" />
+ <window_info anchor="bottom" id="Terminal" order="8" />
+ <window_info anchor="bottom" id="Event Log" order="9" side_tool="true" weight="0.030120483" />
+ <window_info anchor="bottom" id="Python Console" order="10" />
+ <window_info anchor="right" id="Commander" internal_type="SLIDING" order="0" type="SLIDING" weight="0.4" />
+ <window_info anchor="right" id="Ant Build" order="1" weight="0.25" />
+ <window_info anchor="right" content_ui="combo" id="Hierarchy" order="2" weight="0.25" />
+ <window_info anchor="right" id="R Graphics" order="3" />
+ <window_info anchor="right" id="R Packages" order="4" />
+ </layout>
+ </component>
+ <component name="editorHistoryManager">
+ <entry file="file://$PROJECT_DIR$/index.rst">
+ <provider selected="true" editor-type-id="restructured-text-editor" />
+ </entry>
+ <entry file="file://$PROJECT_DIR$/../../../README.md">
+ <provider selected="true" editor-type-id="split-provider[text-editor;markdown-preview-editor]">
+ <state split_layout="SPLIT">
+ <first_editor relative-caret-position="631">
+ <caret line="492" column="177" selection-start-line="492" selection-start-column="132" selection-end-line="492" selection-end-column="181" />
+ <folding>
+ <element signature="e#11390#11416#0" />
+ <element signature="e#18917#18937#0" />
+ <element signature="e#19186#19204#0" />
+ </folding>
+ </first_editor>
+ <second_editor />
+ </state>
+ </provider>
+ </entry>
+ </component>
+</project>
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Developers/gen_docu.rst b/for_developers/Sphinx/source/Developers/gen_docu.rst
new file mode 100644
index 0000000000000000000000000000000000000000..c9a2a8137f08c8be4289d9870df2198d5d3dcf10
--- /dev/null
+++ b/for_developers/Sphinx/source/Developers/gen_docu.rst
@@ -0,0 +1,34 @@
+********************
+Update Documentation
+********************
+
+UNDER CONSTRUCTION
+
+Additional Software
+===================
+
+Developers working on ``flex_extract`` should make extensive use of the prepared test cases, unit tests and update the documentation. For this, some additional software is necessary:
+
+- pylint
+- pytest
+- mock
+- graphviz
+- sphinx
+
+
+
+Online-documentation with Sphinx
+================================
+
+Use the scriot ``gen_docu.sh`` to generate an update of the online documentation of the python component.
+
+It uses ``pyreverse`` to generate a class and a package diagram with graphviz and overwrites the old files in the developers directory.
+``pyreverse`` creates ``dot`` files and with the ``dot`` program of the ``graphviz`` software the ``png`` files are created. Everything happens in the Python source directory before moving them finally to the ``for_developers`` directory. The Sphinx source code has a ``_files`` directory which contains links to these ``png`` files and therefore they should not be renamed.
+
+
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Documentation/Input/control.rst b/for_developers/Sphinx/source/Documentation/Input/control.rst
new file mode 100644
index 0000000000000000000000000000000000000000..0ac59397dfc6a92153ef3b026f3af6170657c39e
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/Input/control.rst
@@ -0,0 +1,63 @@
+================
+The CONTROL file
+================
+
+
+
+.. MARS user documentation https://confluence.ecmwf.int/display/UDOC/MARS+user+documentation
+.. MARS keywords and explanation https://confluence.ecmwf.int/display/UDOC/MARS+keywords
+
+
+This file is an input file for :literal:`flex_extract's` main script :literal:`submit.py`.
+It contains the controlling parameters :literal:`flex_extract` needs to decide on dataset specifications,
+handling of the retrieved data and general bahaviour. The naming convention is usually (but not necessary):
+
+ :literal:`CONTROL_<Dataset>[.optionalIndications]`
+
+The tested datasets are the operational dataset and the re-analysis datasets CERA-20C, ERA5 and ERA-Interim.
+The optional extra indications for the re-analysis datasets mark the files for *public users*
+and *global* domain. For the operational datasets (*OD*) the file names contain also information of
+the stream, the field type for forecasts, the method for extracting the vertical coordinate and other
+things like time or horizontal resolution.
+
+
+Format of CONTROL files
+----------------------------------
+
+The parameters can be sorted in any order with one parameter per line.
+Comments are started with a '#' - sign. Some of these parameters can be overruled by the command line
+parameters given to the :literal:`submit.py` script.
+All parameters have default values. Only those parameters which have to be changed
+must be listed in the :literal:`CONTROL` files.
+
+Example CONTROL files
+--------------------------------
+
+A number of example files can be found in the directory :literal:`flex_extract_vX.X/run/control/`.
+They can be used as a template for adaptations and understand what's possible to
+retrieve from ECMWF's archive.
+For each main dataset there is an example and additionally some variances in resolution, type of field
+or type of retrieving the vertical coordinate.
+
+
+
+
+CONTROL file
+------------
+The file :literal:`CONTROL.documentation` documents the available parameters
+in grouped sections with their default values. In :doc:`control_params` you can find a more
+detailed description with additional hints, possible values and some useful information about
+the setting of these parameters.
+
+.. literalinclude:: ../../../../../run/control/CONTROL.documentation
+ :language: bash
+ :caption: CONTROL.documentation
+
+
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
diff --git a/for_developers/Sphinx/source/Documentation/Input/control_params.rst b/for_developers/Sphinx/source/Documentation/Input/control_params.rst
new file mode 100644
index 0000000000000000000000000000000000000000..125f7af0c176f9d0a610a981db856882002801f5
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/Input/control_params.rst
@@ -0,0 +1,122 @@
+======================
+The CONTROL parameters
+======================
+
+
+.. _ref-control-user:
+
+User Section
+************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-user.csv
+ :header-rows: 1
+ :widths: auto
+
+.. _ref-control-general:
+
+General Section
+***************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-general.csv
+ :header-rows: 1
+ :widths: auto
+
+.. _ref-control-time:
+
+Time Section
+************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-time.csv
+ :header-rows: 1
+ :widths: auto
+
+
+.. _ref-control-data:
+
+Data Section
+************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-data.csv
+ :header-rows: 1
+ :widths: auto
+
+
+.. _ref-control-datafield:
+
+Data field Section
+******************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-datafields.csv
+ :header-rows: 1
+ :widths: auto
+
+
+.. _ref-control-fluxdata:
+
+Flux data Section
+*****************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-fluxdata.csv
+ :header-rows: 1
+ :widths: auto
+
+
+ .. _ref-control-domain:
+
+Domain Section
+**************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-domain.csv
+ :header-rows: 1
+ :widths: auto
+
+
+
+ .. _ref-control-verticalwind:
+
+Vertical wind Section
+*********************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-verticalwind.csv
+ :header-rows: 1
+ :widths: auto
+
+
+.. _ref-control-adddata:
+
+Additional data Section
+***********************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-adddata.csv
+ :header-rows: 1
+ :widths: auto
+
+
+.. _ref-control-flexpart:
+
+Flexpart Section
+****************
+
+.. csv-table::
+ :file: ../../_files/CONTROLparameter-flexpart.csv
+ :header-rows: 1
+ :widths: auto
+
+
+
+
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Documentation/Input/fortran_makefile.rst b/for_developers/Sphinx/source/Documentation/Input/fortran_makefile.rst
new file mode 100644
index 0000000000000000000000000000000000000000..f9b20cb397f813ddd040ffb2a0690eea1df1ca7a
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/Input/fortran_makefile.rst
@@ -0,0 +1,71 @@
+**********************************
+The Fortran Program - ``CONVERT2``
+**********************************
+
+.. _ref-convert:
+
+One of ``flex_extract``'s components is a Fortran program called ``CONVERT2``.
+This will be compiled during the installation process to get an executable. ``flex_extract``
+has a couple of makefiles prepared which are listed in the following.
+
+
+| **Remote/Gateway mode**:
+| Files to be used as they are!
+
+ | **Makefile.gfortran**
+ | For the use on ECMWF's server **ecgate**.
+
+ | **Makefile.CRAY**
+ | For the use on ECMWF's server **cca/ccb**.
+
+| **Local mode**
+| It is necessary to adapt **ECCODES_INCLUDE_DIR** and **ECCODES_LIB**
+
+ | **Makefile.local.gfortran**
+ | For the use with gfortran compiler.
+
+ | **Makefile.local.ifort**
+ | For the use with ifort compiler.
+
+They can be found in the path ``flex_extract_vX.X/source/fortran``, where
+``vX.X`` should be substituted with the current version number.
+
+So starting from the root directory of ``flex_extract``,
+go to the ``Fortran`` source directory and open the ``Makefile`` of your
+choice to modify with an editor of your choice. We use the ``nedit`` in this case.
+So far, we tested ``flex_extract`` with a ``gfortran`` and an ``ifort`` compiler.
+
+.. code-block:: bash
+
+ $ cd flex_extract_vX.X/source/fortran
+ $ nedit Makefile.local.gfortran
+
+
+Edit the pathes to the ``eccodes`` library on your local machine.
+
+.. caution::
+ This can vary from system to system.
+ It is suggested to use a command like
+
+ .. code-block:: bash
+
+ # for the ECCODES_INCLUDE_DIR path do:
+ $ dpkg -L libeccodes-dev | grep eccodes.mod
+ # for the ECCODES_LIB path do:
+ $ dpkg -L libeccodes-dev | grep libeccodes.so
+
+ to find out the path to the ``eccodes`` library.
+
+Substitute these paths in the ``Makefile`` for parameters **ECCODES_INCLUDE_DIR**
+and **ECCODES_LIB** and save it.
+
+.. code-block:: bash
+
+ # these are the paths on a current Debian Testing system (May 2019)
+ ECCODES_INCLUDE_DIR=/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/
+ ECCODES_LIB= -L/usr/lib -leccodes_f90 -leccodes -lm
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Documentation/Input/setup.rst b/for_developers/Sphinx/source/Documentation/Input/setup.rst
new file mode 100644
index 0000000000000000000000000000000000000000..f0b686c985258dd1b9b0ae9dd1531e4718bfaf0b
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/Input/setup.rst
@@ -0,0 +1,27 @@
+**************************************
+The Installation Script - ``setup.sh``
+**************************************
+
+.. _ref-setup:
+
+
+The installation script ``setup.sh`` prepares the call of the Python
+installation script (``install.py``) with its necessary command line arguments.
+The ``setup.sh`` script is located in the root directory of ``flex_extract`` and has a
+section labelled with "AVAILABLE COMMANDLINE ARGUMENTS TO SET" which
+contains the available command line parameters for ``install.py``. The user has to adapt these
+parameters for his personal use. The parameters are listed and described in the following table.
+The script also does some checks to guarantee necessary parameters were set.
+
+.. csv-table::
+ :file: ../../_files/InstallationParameters.csv
+ :header-rows: 1
+ :widths: auto
+
+After the installation some tests can be conducted.
+They are described in section :ref:`ref-testinstallfe`.
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Documentation/Overview/app_modes.rst b/for_developers/Sphinx/source/Documentation/Overview/app_modes.rst
new file mode 100644
index 0000000000000000000000000000000000000000..a1281d97c798b94a0a05c6e570817bb99e6393b4
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/Overview/app_modes.rst
@@ -0,0 +1,47 @@
+*****************
+Application Modes
+*****************
+
+.. role:: underline
+ :class: underline
+
+.. _member state: https://www.ecmwf.int/en/about/who-we-are/member-states
+.. _instructions: https://apps.ecmwf.int/registration/
+
+
+.. _ref-app-modes:
+
+Arising from the two user groups described in :doc:`../../Ecmwf/access`, ``flex_extract`` has 4 different :underline:`user application modes`:
+
+.. _ref-remote-des:
+
+ 1. Remote (member)
+ In the **Remote mode** the user works directly on ECMWF Linux member state server, such as ``ecgate`` or ``cca``. The software will be installed in the ``$HOME`` directory. The user does not need to install any of the additional third-party libraries mentioned in :ref:`ref-requirements` as ECMWF provides everything with environment modules. The module selection will be done automatically in ``flex_extract``.
+
+.. _gateway:
+
+ 2. Gateway (member)
+ The **Gateway mode** can be used if a local member state gateway server is in place. Then the job scripts can be submitted to the ECMWF Linux member state server via the ECMWF web access tool ``ecaccess``. The installation script of ``flex_extract`` must be executed at the local gateway server such that the software will be installed in the ``$HOME`` directory at the ECMWF server and some extra setup is done in the local ``flex_extract`` directory at the local gateway server. For more information about establishing a gateway server please see section ???. For the **Gateway mode** the necessary environment has to be established which is described in :ref:`ref-local-prep`.
+
+.. _local:
+
+ 3. Local member
+ Scripts are installed and executed on a local machine, either in the current ``flex_extract`` directory or in a path given to the installation script. Under this scenario a software environment similar to that at ECMWF is required. Additionally, Web API's have to be installed to access ECMWF server. The complete installation process is described in :ref:`ref-local-prep`.
+
+ 4. Local public
+ Scripts are installed and executed on a local machine, either in the current ``flex_extract`` directory or in a path given to the installation script. Under this scenario a software environment similar to that at ECMWF is required. Additionally, Web API's have to be installed to access ECMWF server. The complete installation process is described in :ref:`ref-local-prep`. In this case a direct registration at ECMWF is necessary and the user has to accept a specific license agreement for each dataset he/she intends to retrieve.
+
+
+An overview is sketched in figure :ref:`ref-fig-marsaccess`.
+
+.. _ref-fig-marsaccess:
+
+.. figure:: ../../_static/Diagramm_MarsAccess2.png
+
+ Application modes
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/documentation/Sphinx/build/html/_sources/requirements.rst.txt b/for_developers/Sphinx/source/Documentation/Overview/convert.rst
similarity index 54%
rename from documentation/Sphinx/build/html/_sources/requirements.rst.txt
rename to for_developers/Sphinx/source/Documentation/Overview/convert.rst
index c1bae21176f9c5855a165a08b99cfe1f1cb01fe2..c983af538a7b70b2e925c04f5212a0dad239d663 100644
--- a/documentation/Sphinx/build/html/_sources/requirements.rst.txt
+++ b/for_developers/Sphinx/source/Documentation/Overview/convert.rst
@@ -1,5 +1,6 @@
-Requirements
-============
+=======
+CONVERT
+=======
UNDER CONSTRUCTION
diff --git a/documentation/Sphinx/source/program_structure/prog_flow.rst b/for_developers/Sphinx/source/Documentation/Overview/prog_flow.rst
similarity index 100%
rename from documentation/Sphinx/source/program_structure/prog_flow.rst
rename to for_developers/Sphinx/source/Documentation/Overview/prog_flow.rst
diff --git a/documentation/Sphinx/source/api.rst b/for_developers/Sphinx/source/Documentation/api.rst
similarity index 100%
rename from documentation/Sphinx/source/api.rst
rename to for_developers/Sphinx/source/Documentation/api.rst
diff --git a/for_developers/Sphinx/source/Documentation/disagg.rst b/for_developers/Sphinx/source/Documentation/disagg.rst
new file mode 100644
index 0000000000000000000000000000000000000000..d6460abd1ab00a8e41c75859d8e780004d9ba1d2
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/disagg.rst
@@ -0,0 +1,11 @@
+===========================
+Disaggregation of Flux Data
+===========================
+
+ UNDER CONSTRUCTION
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Documentation/input.rst b/for_developers/Sphinx/source/Documentation/input.rst
new file mode 100644
index 0000000000000000000000000000000000000000..9922d7633cebf3faf007c9a5f942ceb62657f7a2
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/input.rst
@@ -0,0 +1,12 @@
+====================
+Control & Input Data
+====================
+
+ UNDER CONSTRUCTION
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+ Input/control
+ Input/control_params
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Documentation/output.rst b/for_developers/Sphinx/source/Documentation/output.rst
new file mode 100644
index 0000000000000000000000000000000000000000..ea82e324b49f3ce91a01806ddb2efa4bb9a105cd
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/output.rst
@@ -0,0 +1,10 @@
+===========
+Output Data
+===========
+
+ UNDER CONSTRUCTION
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Documentation/overview.rst b/for_developers/Sphinx/source/Documentation/overview.rst
new file mode 100644
index 0000000000000000000000000000000000000000..9a1dc68390763b7a66d8697f45c6e8bcbb967d1a
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/overview.rst
@@ -0,0 +1,19 @@
+========
+Overview
+========
+
+ UNDER CONSTRUCTION
+
+
+
+The system retrieves the data from the European Centre for
+Medium-Range Weather Forecasts (ECMWF) situated in Reading, United Kingdom.
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+ Overview/app_modes
+ Overview/prog_flow
+ Overview/convert
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Documentation/vertco.rst b/for_developers/Sphinx/source/Documentation/vertco.rst
new file mode 100644
index 0000000000000000000000000000000000000000..f05bed03a4a69d5a48c1573bfbd39518df8d733e
--- /dev/null
+++ b/for_developers/Sphinx/source/Documentation/vertco.rst
@@ -0,0 +1,10 @@
+===================
+Vertical Coordinate
+===================
+
+ UNDER CONSTRUCTION
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
diff --git a/for_developers/Sphinx/source/Ecmwf/access.rst b/for_developers/Sphinx/source/Ecmwf/access.rst
new file mode 100644
index 0000000000000000000000000000000000000000..c21fb3b7772d830a08b706d9fee04b217e21c2d1
--- /dev/null
+++ b/for_developers/Sphinx/source/Ecmwf/access.rst
@@ -0,0 +1,21 @@
+************
+Access Modes
+************
+
+.. _public datasets: https://confluence.ecmwf.int/display/WEBAPI/Available+ECMWF+Public+Datasets
+.. _Computing Representative: https://www.ecmwf.int/en/about/contact-us/computing-representatives
+
+Access to the ECMWF Mars archive is divided into two groups: **member state** users and **public** users.
+
+**Member state user**:
+ This access mode allows the user to work directly on the ECMWF Linux Member State Servers or via a Web Access Toolkit ``ecaccess`` through a local Member State Gateway Server. This enables the user to have direct and full access to the Mars archive. There might be some limitations in user rights such as the declined access to the latest forecasts. This has to be discussed with the `Computing Representative`_. This user group is also able to work from their local facilities without a gateway server in the same way a **public** user would. The only difference is the method of Web API which is automatically selected by ``flex_extract``.
+
+
+**Public user**:
+ This access mode allows every user to access the ECMWF `public datasets`_ from their local facilities. ``Flex_extract`` is able (tested for the use with ``FLEXPART``) to extract the re-analysis datasets such as ERA5, ERA-Interim and CERA-20C. The main difference to the **member state user** is the method of access with the Web API and the availability of data. For example, in ERA-Interim there is only a 6-hourly temporal resolution instead of 3 hours. The access method is selected by providing the command line argument "public=1" and providing the Mars keyword "dataset" in the ``CONTROL`` file. Also, the user has to explicitly accept the license of the dataset to be retrieved. This can be done as described in the installation process at section :ref:`ref-licence`.
+
+For information on how to register see :ref:`ref-registration`.
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/Ecmwf/ec-links.rst b/for_developers/Sphinx/source/Ecmwf/ec-links.rst
new file mode 100644
index 0000000000000000000000000000000000000000..d0a9fdfde2c6c22e2d2ed04ac19a2feff988adb8
--- /dev/null
+++ b/for_developers/Sphinx/source/Ecmwf/ec-links.rst
@@ -0,0 +1,106 @@
+################################
+Link Collection for Quick finder
+################################
+
+
+ECMWF - General Overview
+ `ECMWF Home <https://www.ecmwf.int/>`_
+
+ `ECMWF Training <https://www.ecmwf.int/en/learning>`_
+
+ `General User Documentation <https://software.ecmwf.int/wiki/display/UDOC/User+Documentation>`_
+
+ `Software Support <https://confluence.ecmwf.int/display/SUP>`_
+
+MARS
+ `MARS user documentation <https://confluence.ecmwf.int//display/UDOC/MARS+user+documentation>`_
+
+ `MARS Keywords <https://software.ecmwf.int/wiki/display/UDOC/MARS+keywords>`_
+
+ `MARS Content <https://confluence.ecmwf.int/display/UDOC/MARS+content>`_
+
+ `MARS Actions <https://confluence.ecmwf.int/display/UDOC/MARS+actions>`_
+
+Registration
+ `Contact of Computing Representative's <https://www.ecmwf.int/en/about/contact-us/computing-representatives>`_
+
+ `Public registration for ECMWF Web API <https://software.ecmwf.int/wiki/display/WEBAPI/Access+MARS>`_
+
+ `CDS Registration <https://cds.climate.copernicus.eu/user/register>`_
+
+Available Member State Datasets
+ `Web Interface for accessing member state datasets <http://apps.ecmwf.int/archive-catalogue/>`_
+
+ `Available datasets for member state users <https://www.ecmwf.int/en/forecasts/datasets>`_
+
+Available Public Datasets
+ `Web Interface for accessing public datasets <http://apps.ecmwf.int/datasets/>`_
+
+ `ECMWF's public datasets <https://confluence.ecmwf.int/display/WEBAPI/Available+ECMWF+Public+Datasets>`_
+
+ `Public dataset Licences <https://software.ecmwf.int/wiki/display/WEBAPI/Available+ECMWF+Public+Datasets>`_
+
+ `ERA5 public dataset Licence <https://cds.climate.copernicus.eu/cdsapp#!/search?type=dataset>`_
+
+
+Datasets
+ Overview
+ `What is climate reanalysis <https://www.ecmwf.int/en/research/climate-reanalysis>`_
+
+ ERA-Interim
+ `What is ERA-Interim <https://confluence.ecmwf.int/display/CKB/What+is+ERA-Interim>`_
+
+ `ERA-Interim documentation <https://www.ecmwf.int/en/elibrary/8174-era-interim-archive-version-20>`_
+
+ `ERA-Interim dataset <https://www.ecmwf.int/en/forecasts/datasets/archive-datasets/reanalysis-datasets/era-interim>`_
+
+ CERA-20C
+ `What is CERA-20C <https://software.ecmwf.int/wiki/display/CKB/What+is+CERA-20C>`_
+
+ `CERA-20C documentation <https://www.ecmwf.int/en/forecasts/datasets/archive-datasets/reanalysis-datasets/cera-20c>`_
+
+ ERA5
+ `What is ERA5 <https://software.ecmwf.int/wiki/display/CKB/What+is+ERA5>`_
+
+ `What are the changes from ERA-Interim to ERA5 <https://confluence.ecmwf.int/pages/viewpage.action?pageId=74764925>`_
+
+ `How to download ERA5 via Climate Data Store <https://confluence.ecmwf.int/display/CKB/How+to+download+ERA5>`_
+
+ `How to migrate from ECMWF Web API to CDS API <https://confluence.ecmwf.int/display/CKB/How+to+migrate+from+ECMWF+Web+API+to+CDS+API>`_
+
+ `ERA5 Documentation <https://software.ecmwf.int/wiki/display/CKB/ERA5+data+documentation>`_
+
+
+Third Party Libraries
+ `ECMWF Web API Home <https://software.ecmwf.int/wiki/display/WEBAPI/ECMWF+Web+API+Home>`_
+
+ `Building ECMWF software with gfortran <https://software.ecmwf.int/wiki/display/SUP/2015/05/11/Building+ECMWF+software+with+gfortran>`_
+
+ `FFTW <http://www.fftw.org>`_
+
+ `EMOSLIB <https://software.ecmwf.int/wiki/display/EMOS/Emoslib>`_
+
+ `ECcodes <https://software.ecmwf.int/wiki/display/ECC>`_
+
+ `C3S ERA5: Web API to CDS API <https://confluence.ecmwf.int/display/CKB/C3S+ERA5%3A+Web+API+to+CDS+API>`_
+
+ `ECaccess Documentation <https://confluence.ecmwf.int/display/ECAC/ECaccess+Home>`_
+
+Plotting GRIB fields:
+ `Example Python script to plot GRIB files <https://software.ecmwf.int/wiki/display/CKB/How+to+plot+GRIB+files+with+Python+and+matplotlib>`_
+
+
+Scientific Information
+ `Octahedral reduced Gaussian Grid <https://confluence.ecmwf.int/display/FCST/Introducing+the+octahedral+reduced+Gaussian+grid>`_
+
+ `Precipitation <https://www.ecmwf.int/en/newsletter/147/meteorology/use-high-density-observations-precipitation-verification>`_
+
+
+Troubleshooting
+ `ECMWF Web API Troubleshooting <https://confluence.ecmwf.int/display/WEBAPI/Web-API+Troubleshooting>`_
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Ecmwf/hintsecmwf.rst b/for_developers/Sphinx/source/Ecmwf/hintsecmwf.rst
new file mode 100644
index 0000000000000000000000000000000000000000..e601cffa1e17f1976883f8baa2d1969ad3e579cf
--- /dev/null
+++ b/for_developers/Sphinx/source/Ecmwf/hintsecmwf.rst
@@ -0,0 +1,25 @@
+##################################
+Hints to specify dataset retrieval
+##################################
+
+.. contents::
+ :local:
+
+
+
+How can I find out what data is available?
+==========================================
+
+Go to the `Web Interface for accessing member state datasets <http://apps.ecmwf.int/archive-catalogue/>`_
+and click yourself through the steps to define your set of data and see what is available to you.
+
+For public users there is the `Web Interface for accessing public datasets <http://apps.ecmwf.int/datasets/>`_.
+
+
+
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Ecmwf/msdata.rst b/for_developers/Sphinx/source/Ecmwf/msdata.rst
new file mode 100644
index 0000000000000000000000000000000000000000..da321a9807365d90f16d463601f1381c390718da
--- /dev/null
+++ b/for_developers/Sphinx/source/Ecmwf/msdata.rst
@@ -0,0 +1,22 @@
+#########################################
+Available Datasets for Member State users
+#########################################
+
+
+
+Model level data
+================
+
+.. figure:: ../_files/ECMWF_FPparameter_ml.png
+
+
+Surface level data
+==================
+
+.. figure:: ../_files/ECMWF_FPparameter_sfc-0.png
+.. figure:: ../_files/ECMWF_FPparameter_sfc-1.png
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Ecmwf/pubdata.rst b/for_developers/Sphinx/source/Ecmwf/pubdata.rst
new file mode 100644
index 0000000000000000000000000000000000000000..277b09106f662789f45d2d578b1d25390175b0d5
--- /dev/null
+++ b/for_developers/Sphinx/source/Ecmwf/pubdata.rst
@@ -0,0 +1,9 @@
+Available Datasets for Public users
+***********************************
+
+ IN PREPARATION
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/for_developers/Sphinx/source/Evaluation/metrics.rst b/for_developers/Sphinx/source/Evaluation/metrics.rst
new file mode 100644
index 0000000000000000000000000000000000000000..01fb4bbc858c8fe5c2552391d9df8bf5a358f4b0
--- /dev/null
+++ b/for_developers/Sphinx/source/Evaluation/metrics.rst
@@ -0,0 +1,8 @@
+Metrics
+=======
+
+.. csv-table: TTEST
+.. :file: metrics_7.1.csv
+.. :widths: 1,1,1,1,1,1
+.. :header-rows: 1
+
diff --git a/for_developers/Sphinx/source/Support/faq.rst b/for_developers/Sphinx/source/Support/faq.rst
new file mode 100644
index 0000000000000000000000000000000000000000..616850d36a761c822195752b7686d7665de6fc7a
--- /dev/null
+++ b/for_developers/Sphinx/source/Support/faq.rst
@@ -0,0 +1,38 @@
+################################
+FAQ - Frequently asked questions
+################################
+
+.. contents::
+ :local:
+
+
+
+What can I do if I can't install the third party libraries from distribution packages?
+======================================================================================
+
+This can be the case if the user does not have admin rights.
+It is possible to install the necessary libraries locally from source.
+For this case you should follow the following steps:
+
+Installation hints:
+ 1. `Read Emoslib installation instructions <https://software.ecmwf.int/wiki/display/EMOS/Emoslib>`_
+ 2. `Read ECMWF blog about gfortran <https://software.ecmwf.int/wiki/display/SUP/2015/05/11/Building+ECMWF+software+with+gfortran>`_
+ 3. `Install FFTW <http://www.fftw.org>`_
+ 4. `Install EMOSLIB <https://software.ecmwf.int/wiki/display/EMOS/Emoslib>`_ (2 times make! one without any options and one with single precision option)
+ 5. `Install ECCODES <https://software.ecmwf.int/wiki/display/ECC>`_
+ 6. Register at Mars (:ref:`ref-registration`)
+ 7. Install Web API's `CDS API <https://cds.climate.copernicus.eu/api-how-to>`_ and `ECMWF Web API <https://confluence.ecmwf.int/display/WEBAPI/ECMWF+Web+API+Home>`_
+ 8. Check LD_LIBRARY_PATH environment variable if it contains all paths to the libs
+ 9. Check available python packages (e.g. import eccodes / import grib_api / import ecmwfapi)
+ 10. Start test retrieval (:ref:`ref-test-local`)
+ 11. Install ``flex_extract`` (:doc:`../installation`)
+
+.. caution::
+ - use the same compiler and compiler version all the time
+ - don't forget to set all Library paths in the LD_LIBRARY_PATH environment variable
+ - adapt the ``flex_extract`` makefile
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
diff --git a/documentation/Sphinx/source/support/known_bugs_issues.rst b/for_developers/Sphinx/source/Support/known_bugs_issues.rst
similarity index 69%
rename from documentation/Sphinx/source/support/known_bugs_issues.rst
rename to for_developers/Sphinx/source/Support/known_bugs_issues.rst
index 8748ad8172249cba3055858194d6aea4497237e2..9ca018cf8f1ab82c790a237d0f58616e8fd34437 100644
--- a/documentation/Sphinx/source/support/known_bugs_issues.rst
+++ b/for_developers/Sphinx/source/Support/known_bugs_issues.rst
@@ -1,4 +1,4 @@
Known Bugs and Issues
=====================
- UNDER CONSTRUCTION
\ No newline at end of file
+
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-adddata.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-adddata.csv
new file mode 120000
index 0000000000000000000000000000000000000000..cc0baae9f60a952fbb9efede906ca4118ee848ba
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-adddata.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-adddata.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-data.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-data.csv
new file mode 120000
index 0000000000000000000000000000000000000000..d543055de2154963c5a8e10f10faf86625373ed2
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-data.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-data.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-datafields.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-datafields.csv
new file mode 120000
index 0000000000000000000000000000000000000000..fba4d2e1bd0ab4a9429e735cd750ea8c2ee9bc22
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-datafields.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-datafields.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-domain.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-domain.csv
new file mode 120000
index 0000000000000000000000000000000000000000..84d16e66c624d1866a2bf6fcda7157bad47c9889
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-domain.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-domain.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-flexpart.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-flexpart.csv
new file mode 120000
index 0000000000000000000000000000000000000000..c4f362b9637482bc44deda9a593605ab4c81c665
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-flexpart.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-flexpart.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-fluxdata.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-fluxdata.csv
new file mode 120000
index 0000000000000000000000000000000000000000..985583ef886547209bb780d2c752d0ec2d5d8f0e
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-fluxdata.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-fluxdata.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-general.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-general.csv
new file mode 120000
index 0000000000000000000000000000000000000000..c285e1c22bcd6a4b65f726730e591539774bfc02
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-general.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-general.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-time.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-time.csv
new file mode 120000
index 0000000000000000000000000000000000000000..d96f0fdde6a32b68d5ca5c9a851274e3fdf8cf93
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-time.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-time.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-user.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-user.csv
new file mode 120000
index 0000000000000000000000000000000000000000..3163de83fed8206cb3f7aa7bdd957cbca51367ec
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-user.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-user.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/CONTROLparameter-verticalwind.csv b/for_developers/Sphinx/source/_files/CONTROLparameter-verticalwind.csv
new file mode 120000
index 0000000000000000000000000000000000000000..9aae3d85955d5569ebf1e8f7bbd0737338d3d641
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/CONTROLparameter-verticalwind.csv
@@ -0,0 +1 @@
+../../../../for_developers/CONTROLparameter-verticalwind.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/ECMWF_FPparameter-sfc.csv b/for_developers/Sphinx/source/_files/ECMWF_FPparameter-sfc.csv
new file mode 120000
index 0000000000000000000000000000000000000000..12a889ac012222e2e8d53a4ce0e8ba3cdb9e7672
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/ECMWF_FPparameter-sfc.csv
@@ -0,0 +1 @@
+../../../../for_developers/ECMWF_FPparameter-sfc.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/ECMWF_FPparameter_ml.pdf b/for_developers/Sphinx/source/_files/ECMWF_FPparameter_ml.pdf
new file mode 100644
index 0000000000000000000000000000000000000000..1080dfbe5d9f2eba723b34612caacae1f06fe910
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diff --git a/for_developers/Sphinx/source/_files/ECMWF_FPparameter_sfc-1.png b/for_developers/Sphinx/source/_files/ECMWF_FPparameter_sfc-1.png
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new file mode 100644
index 0000000000000000000000000000000000000000..ec2aadcf6077de46781a1bc7f9cc4051af8b7d60
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diff --git a/for_developers/Sphinx/source/_files/InstallationParameters.csv b/for_developers/Sphinx/source/_files/InstallationParameters.csv
new file mode 120000
index 0000000000000000000000000000000000000000..bded352120370e46bd88f72d7e867b1f28a28566
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/InstallationParameters.csv
@@ -0,0 +1 @@
+../../../../for_developers/InstallationParameter-csv.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/SubmitParameters.csv b/for_developers/Sphinx/source/_files/SubmitParameters.csv
new file mode 120000
index 0000000000000000000000000000000000000000..08352706d3425993ced417dc998cdd7e6adc1484
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/SubmitParameters.csv
@@ -0,0 +1 @@
+../../../../for_developers/SubmitParameters.csv
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_files/packages.png b/for_developers/Sphinx/source/_files/packages.png
new file mode 120000
index 0000000000000000000000000000000000000000..f1108c3eeed7bacb42581b3a1106bd4c1d182169
--- /dev/null
+++ b/for_developers/Sphinx/source/_files/packages.png
@@ -0,0 +1 @@
+../../../../for_developers/packages.png
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/_static/Diagramm_MarsAccess2.png b/for_developers/Sphinx/source/_static/Diagramm_MarsAccess2.png
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index 0000000000000000000000000000000000000000..2bc1a47cdba063d3dcf7ff0fedc85339f7df3172
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diff --git a/documentation/Sphinx/build/html/_static/api_icon.png b/for_developers/Sphinx/source/_static/api_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/api_icon.png
rename to for_developers/Sphinx/source/_static/api_icon.png
diff --git a/documentation/Sphinx/build/html/_static/cc-by-40.png b/for_developers/Sphinx/source/_static/cc-by-40.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/cc-by-40.png
rename to for_developers/Sphinx/source/_static/cc-by-40.png
diff --git a/for_developers/Sphinx/source/_static/change_icon.png b/for_developers/Sphinx/source/_static/change_icon.png
new file mode 100644
index 0000000000000000000000000000000000000000..03324970ad78e6ffd9abe35d2d003167a1a869af
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diff --git a/for_developers/Sphinx/source/_static/check_icon.png b/for_developers/Sphinx/source/_static/check_icon.png
new file mode 100644
index 0000000000000000000000000000000000000000..1b7a4109f8806dae1aa25644694cb4c697bed070
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diff --git a/for_developers/Sphinx/source/_static/css/custom.css b/for_developers/Sphinx/source/_static/css/custom.css
new file mode 100644
index 0000000000000000000000000000000000000000..54870c379e4ef8652dd3cd7f3522d75a242ce0e9
--- /dev/null
+++ b/for_developers/Sphinx/source/_static/css/custom.css
@@ -0,0 +1,7 @@
+.underline {
+ text-decoration: underline;
+}
+
+.wy-nav-content {
+ max-width: 1000px !important;
+}
diff --git a/for_developers/Sphinx/source/_static/css/theme_overrides.css b/for_developers/Sphinx/source/_static/css/theme_overrides.css
new file mode 100644
index 0000000000000000000000000000000000000000..b13709631b14fd1341056106535df4b9bb13eb54
--- /dev/null
+++ b/for_developers/Sphinx/source/_static/css/theme_overrides.css
@@ -0,0 +1,11 @@
+/* override table width restrictions */
+@media screen and (min-width: 767px) {
+
+ .wy-table-responsive table td {
+ /* !important prevents the common CSS stylesheets from overriding
+ this as on RTD they are loaded after this stylesheet */
+ white-space: normal !important;
+ }
+
+
+}
diff --git a/documentation/Sphinx/build/html/_images/download_icon.png b/for_developers/Sphinx/source/_static/download_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_images/download_icon.png
rename to for_developers/Sphinx/source/_static/download_icon.png
diff --git a/for_developers/Sphinx/source/_static/fe7.0.4_radon_cc_12-03-2019.png b/for_developers/Sphinx/source/_static/fe7.0.4_radon_cc_12-03-2019.png
new file mode 100644
index 0000000000000000000000000000000000000000..80be06f2b8bd542196eeae4ea89990b103428f52
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diff --git a/documentation/Sphinx/build/html/_static/guide_icon.png b/for_developers/Sphinx/source/_static/guide_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/guide_icon.png
rename to for_developers/Sphinx/source/_static/guide_icon.png
diff --git a/documentation/Sphinx/build/html/_static/help_icon.png b/for_developers/Sphinx/source/_static/help_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/help_icon.png
rename to for_developers/Sphinx/source/_static/help_icon.png
diff --git a/documentation/Sphinx/build/html/_static/install_icon.png b/for_developers/Sphinx/source/_static/install_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/install_icon.png
rename to for_developers/Sphinx/source/_static/install_icon.png
diff --git a/documentation/Sphinx/build/html/_images/prog_icon.png b/for_developers/Sphinx/source/_static/prog_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_images/prog_icon.png
rename to for_developers/Sphinx/source/_static/prog_icon.png
diff --git a/documentation/Sphinx/build/html/_static/source_icon.png b/for_developers/Sphinx/source/_static/source_icon.png
similarity index 100%
rename from documentation/Sphinx/build/html/_static/source_icon.png
rename to for_developers/Sphinx/source/_static/source_icon.png
diff --git a/for_developers/Sphinx/source/authors.rst b/for_developers/Sphinx/source/authors.rst
new file mode 100644
index 0000000000000000000000000000000000000000..e365e94587c442d1e549289074f98f27edec0c2f
--- /dev/null
+++ b/for_developers/Sphinx/source/authors.rst
@@ -0,0 +1,24 @@
+**************
+Developer Team
+**************
+
+| MSc. Anne Philipp
+| Department of Meteorology and Geophysics /
+| Aerosol Physics and Environmental physics
+| University of Vienna
+| Althanstraße 14 / UZA II
+| 1090 Vienna, Austria
+| mail: anne.philipp [at] univie.ac.at
+
+
+
+| Leopold Haimberger
+| University of Vienna
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+
+
diff --git a/for_developers/Sphinx/source/changelog.rst b/for_developers/Sphinx/source/changelog.rst
new file mode 100644
index 0000000000000000000000000000000000000000..31c200e2a57361b2ff74f19767322c0e4bb8d8c0
--- /dev/null
+++ b/for_developers/Sphinx/source/changelog.rst
@@ -0,0 +1,87 @@
+Changelog
+=========
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+.. _CDS API: https://cds.climate.copernicus.eu/api-how-to
+.. _ECMWF Web API: https://confluence.ecmwf.int/display/WEBAPI/ECMWF+Web+API+Home
+.. _new algorithm: https://www.geosci-model-dev.net/11/2503/2018/
+
+.. _ref-v71:
+
+Release v7.1
+------------
+New Features
+############
+
+ * first set of UNIT tests
+ * first set of regression tests
+ * structured documentation with Sphinx
+ * local retrieval via `CDS API`_ for ERA 5 data
+ * simplified installation process
+ * disaggregation of precipitation with a `new algorithm`_
+
+Changes
+#######
+ * upgraded to Python3
+ * applied PEP8 style guide
+ * use of genshi templates
+ * modularization of python source code
+ * upgrade from grib_api to ecCodes
+ * completely revised/refactored python section
+ * restructured program directories
+
+.. _ref-v704:
+
+Release v7.0.4
+--------------
+New Features
+############
+
+ * Ensemble retrieval for ENFO and ELDA stream (ZAMG specific with extra synthesized ensembles for ELDA stream)
+
+Bug fixes
+#########
+
+ * diverse problems with ERA 5 retrieval
+ * diverse problems with CERA-20C retrieval
+ * BASETIME retrieval option
+ * `CONVERT2` FORTRAN program: initialise fields to 0.
+ (introduced initialization of :literal:`field` variable in the Fortran program
+ with :literal:`field=0.` in file :literal:`rwGRIB2.f90` to avoid getting unreasonable large numbers.)
+
+.. _ref-v703:
+
+Release v7.0.3
+--------------
+New Features
+############
+
+ * output of mars requests to an extra file (debugging and documentation)
+ * CERA-20C download
+ * ERA 5 download
+ * public user interface with `ECMWF Web API`_
+ * use of `ECMWF Web API`_ for local retrieval version
+
+.. _ref-v702:
+
+Release v7.0.2
+--------------
+New Features
+############
+
+ * Python based version
+
+Changes
+#######
+
+ * korn shell scripts were substituted by python scripts
+
+.. _ref-v60:
+
+Release v0.1 - v6.0
+-------------------
+
+ * old version which should no longer be used anymore
diff --git a/documentation/Sphinx/source/conf.py b/for_developers/Sphinx/source/conf.py
similarity index 90%
rename from documentation/Sphinx/source/conf.py
rename to for_developers/Sphinx/source/conf.py
index 3b173b720bcc1e2bc2503ea57559d4ca006290ae..88d94e21dde6cae8aa3539a03d52af85611f385e 100644
--- a/documentation/Sphinx/source/conf.py
+++ b/for_developers/Sphinx/source/conf.py
@@ -23,7 +23,7 @@ sys.path.insert(0, os.path.abspath('../../../source/python/classes'))
# -- Project information -----------------------------------------------------
project = u'flex_extract'
-copyright = u'2018, Anne Philipp and Leopold Haimberger'
+copyright = u'2019, Anne Philipp and Leopold Haimberger'
author = u'Anne Philipp and Leopold Haimberger'
# The short X.Y version
@@ -51,6 +51,9 @@ extensions = [
'sphinx.ext.ifconfig',
'sphinx.ext.viewcode',
'sphinx.ext.githubpages',
+# 'sphinx_pyreverse',
+ 'sphinx-jsonschema',
+ 'sphinx.ext.intersphinx'
]
# Add any paths that contain templates here, relative to this directory.
@@ -92,7 +95,10 @@ html_theme = 'sphinx_rtd_theme'
# further. For a list of options available for each theme, see the
# documentation.
#
-# html_theme_options = {}
+html_theme_options = {
+ 'display_version': True,
+ 'titles_only': False,
+}
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
@@ -121,11 +127,11 @@ htmlhelp_basename = 'flex_extractdoc'
latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#
- # 'papersize': 'letterpaper',
+ 'papersize': 'a4paper',
# The font size ('10pt', '11pt' or '12pt').
#
- # 'pointsize': '10pt',
+ 'pointsize': '12pt',
# Additional stuff for the LaTeX preamble.
#
@@ -133,7 +139,7 @@ latex_elements = {
# Latex figure (float) alignment
#
- # 'figure_align': 'htbp',
+ 'figure_align': 'htbp',
}
# Grouping the document tree into LaTeX files. List of tuples
@@ -169,7 +175,22 @@ texinfo_documents = [
# -- Extension configuration -------------------------------------------------
+html_context = {
+ 'css_files': ['_static/css/custom.css',
+ '_static/css/theme_overrides.css'
+ ],
+}
+
# -- Options for todo extension ----------------------------------------------
# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True
+
+
+# -- Add extra css -----------------------------------------------------------
+def setup(app):
+ app.add_stylesheet('css/custom.css')
+
+
+
+
diff --git a/for_developers/Sphinx/source/dev_guide.rst b/for_developers/Sphinx/source/dev_guide.rst
new file mode 100644
index 0000000000000000000000000000000000000000..40dd2aebf4c3ccb836df066d95c380e9f86bee93
--- /dev/null
+++ b/for_developers/Sphinx/source/dev_guide.rst
@@ -0,0 +1,14 @@
+Developer Guide
+===============
+
+ UNDER CONSTRUCTION
+
+
+.. repository (how /who manages the code, where to get)
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+ Developers/gen_docu
\ No newline at end of file
diff --git a/for_developers/Sphinx/source/documentation.rst b/for_developers/Sphinx/source/documentation.rst
new file mode 100644
index 0000000000000000000000000000000000000000..c2be284be4de7d6ccbc9fd91483312aa223475fb
--- /dev/null
+++ b/for_developers/Sphinx/source/documentation.rst
@@ -0,0 +1,99 @@
+=============
+Documentation
+=============
+
+ Overview
+ - What is ``flex_extract``?
+
+ - general overview
+ - motivation, aim
+ - directory structure
+
+ - Software components
+ complete component structure (table or diagram)
+
+ - Python package
+
+ - Package diagram
+ - Files and modules as table with information about unit tests
+ - Api
+
+ - Fortran program - CONVERT2
+
+ - Package diagram
+ - Api
+
+ - Wrapping shell-scripts
+
+ - Dependencies
+ - General context (for who?, Usecases, work tree)
+ - Access to ECMWF
+ - Application modes
+ - Call tree
+ - Sequence diagram
+
+ Control & Input Data
+ - Controlling files
+
+ - setup.sh (explain input parameters)
+ - job scripts
+ - compile job
+ - run[_local].sh
+
+ - Input Data
+
+ - CONTROL files
+
+ - The CONTROL file
+ - CONTROL parameters
+ - Examples
+ - Changes and its downward compatibilities (eg M _ /grid)
+
+ - ECMWF_ENV file
+ - Templates
+
+ Output Data
+ - mars request file
+ - Mars grib files
+ - flux files
+ - index.idx
+ - CONTROL (neu)
+ - fort files
+ - EN* files
+
+ - Usual output
+ - Output for pure forecast
+ - Output for ensemble members
+ - Output for new precipitation disaggregation
+
+ Disaggregation
+ - What is disaggregation?
+ - Why do we need it/ which fields?
+ - Method for precipitation
+
+ - Old method
+ - New method
+ - Differences in resulting Gribfiles
+
+ - Method for rest fields
+
+ Vertical Coordinate
+ - Methods (GAUSS, ETA, OMEGA)
+ - CONVERT (Petra)
+
+ Auto Generated Documentation
+ - Python
+ - Fortran
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+ Documentation/overview
+ Documentation/input
+ Documentation/output
+ Documentation/disagg
+ Documentation/vertco
+ Documentation/api
+
diff --git a/for_developers/Sphinx/source/ecmwf_data.rst b/for_developers/Sphinx/source/ecmwf_data.rst
new file mode 100644
index 0000000000000000000000000000000000000000..35ddb57bb0566255586d1cd9088d6d48b215dd71
--- /dev/null
+++ b/for_developers/Sphinx/source/ecmwf_data.rst
@@ -0,0 +1,43 @@
+**********
+ECMWF Data
+**********
+
+.. _ECMWF: http://www.ecmwf.int
+.. _Member States: https://www.ecmwf.int/en/about/who-we-are/member-states
+
+
+The European Centre for Medium-Range Weather Forecasts (`ECMWF`_), based in Reading, UK, is an independent intergovernmental organisation supported by 34 states. It is both a research institute and a full time operational service. It produces global numerical weather predictions and some other data which is fully available to the national meteorological services in the `Member States`_, Co-operating States and the broader community. Especially, the published re-analysis datasets are made available to the public with some limits in specific datasets.
+
+The amount and structure of the available data from ECMWF is very complex. The operational data changes regularly in time and spatial resolution, physics and parameter. This has to be taken into account carefully and each user has to investigate his dataset of interest carefully before selecting and retrieving it with ``flex_extract``.
+The re-analysis datasets are consistent in all the above mentioned topics over their whole period but they have each their own specialities which makes treatment with ``flex_extract`` special in some way. For example, they have different starting times for their forecasts or different parameter availability. They also have differences in time and spatial resolution and most importantly for ``flex_extract`` they are different in the way of providing the vertical coordinate.
+
+There is much to learn from ECMWF and their datasets and data handling and this might be confusing at first. We therefore collected the most important information for ``flex_extract`` users. In the following sections the user can use them to get to know enough to understand how ``flex_extract`` is best used and to select the parameters of the ``CONTROL`` files.
+
+
+:doc:`Ecmwf/access`
+ Description of available access methods to the ECMWF data.
+
+:doc:`Ecmwf/msdata`
+ Information about available data and parameters for member state users which can be retrieved with ``flex_extract``
+
+:doc:`Ecmwf/pubdata`
+ Information about available data and parameters for the public datasets which can be retrieved with ``flex_extract``
+
+:doc:`Ecmwf/hintsecmwf`
+ Collection of hints to best find information to define the dataset for retrievement and
+ to define the ``CONTROL`` files.
+
+:doc:`Ecmwf/ec-links`
+ Link collection for additional and useful information as well as references to specific dataset publications.
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+ Ecmwf/access
+ Ecmwf/msdata
+ Ecmwf/pubdata
+ Ecmwf/hintsecmwf
+ Ecmwf/ec-links
+
diff --git a/for_developers/Sphinx/source/evaluation.rst b/for_developers/Sphinx/source/evaluation.rst
new file mode 100644
index 0000000000000000000000000000000000000000..ca66970956a86a9ceda81a2717e31fb81de31c06
--- /dev/null
+++ b/for_developers/Sphinx/source/evaluation.rst
@@ -0,0 +1,42 @@
+Evaluation
+==========
+
+ UNDER CONSTRUCTION
+
+
+
+Tests
+- unit tests
+ - table with all files and their functions and which already have unit tests
+- regression tests
+- performance
+- test runs with control files
+
+Metriken
+- list all of them
+
+
+Coverage
+- test coverage?!
+- documentation coverage
+
+Static Analysis
+- pylint
+- pyreverse
+- radon
+
+Performance analysis:
+- Whole software
+- Disaggregation
+- Convert2
+- prepare_flexpart
+- Andere komponenten
+
+
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+.. evaluation/code
+
diff --git a/for_developers/Sphinx/source/first_steps.rst b/for_developers/Sphinx/source/first_steps.rst
new file mode 100644
index 0000000000000000000000000000000000000000..91b66be6c5b2cccc49a074eacd9bf2b8308ce386
--- /dev/null
+++ b/for_developers/Sphinx/source/first_steps.rst
@@ -0,0 +1,14 @@
+First Steps
+===========
+
+ UNDER CONSTRUCTION
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+.. user_guide/oper_modes
+.. user_guide/ecmwf
+.. user_guide/how_to
+.. user_guide/control_templates
+
diff --git a/for_developers/Sphinx/source/index.rst b/for_developers/Sphinx/source/index.rst
new file mode 100644
index 0000000000000000000000000000000000000000..9f6482c73b4bdc25e4248f9ef087a9007e56afcb
--- /dev/null
+++ b/for_developers/Sphinx/source/index.rst
@@ -0,0 +1,159 @@
+.. flex_extract documentation master file, created by
+ sphinx-quickstart on Wed Oct 17 18:39:05 2018.
+ You can adapt this file completely to your liking, but it should at least
+ contain the root `toctree` directive.
+
+========================================================
+Welcome to :literal:`flex_extract's` user documentation!
+========================================================
+
+:literal:`flex_extract` is an open-source software to retrieve meteorological fields from the European Centre for Medium-Range Weather Forecasts (ECMWF) Mars archive to serve as input files for the FLEXTRA/FLEXPART Atmospheric Transport Modelling system.
+
+
+.. The scripts can be 1) executed locally using the ECMWF WebMARS interface, or 2) on the ECMWF member
+.. state gateway server or HPC facility using the ecaccess software package. As another option the scripts can 3)
+.. also be triggered using ecflow scheduling software used by ECMWF for data dissemination.
+
+.. All third-party software and libraries required by :literal:`flex_extract` are open source and free of charge.
+
+.. raw:: html
+
+ <table style="width:100%;">
+ <tr>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="_static/install_icon.png">
+ </div>
+ <h2><a href="installation.html">Installation</a></h2>
+ <ul>
+ <li><a href="installation.html#ref-requirements">Environment requirements</a></li>
+ <li><a href="installation.html#ref-download">Download flex_extract</a></li>
+ <li><a href="installation.html#ref-install-fe">Install flex_extract</a></li>
+ </ul>
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="">
+ </div>
+ <h2><a href="ecmwf_data.html">ECMWF data</a></h2>
+ <ul>
+ <li><a href="ecmwf_data.html">Overview</a></li>
+ <li><a href="Ecmwf/access.html">Access Modes</a></li>
+ <li><a href="Ecmwf/ec-links.html">Link Collection</a></li>
+ </ul>
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="_static/prog_icon.png">
+ </div>
+ <h2><a href="documentation.html">Documentation</a></h2>
+ <ul>
+ <li><a href="">Content</a></li>
+ <li><a href="">Configuration</a></li>
+ <li><a href="">Tutorials</a></li>
+ </ul>
+ </td>
+ </tr>
+ <tr>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="_static/guide_icon.png">
+ </div>
+ <h2><a href="first_steps.html">First Steps</a></h2>
+ <ul>
+ <li><a href="">...</a></li>
+ <li><a href="">...</a></li>
+ <li><a href="">...</a></li>
+ </ul>
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="">
+ </div>
+ <h2><a href="evaluation.html">Evaluation</a></h2>
+ <ul>
+ <li><a href="">Code</a></li>
+ <li><a href="">Functionality</a></li>
+ <li><a href="">Regression</a></li>
+ </ul>
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:20%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="_static/guide_icon.png">
+ </div>
+ <h2><a href="dev_guide.html">Developer</a></h2>
+ <ul>
+ <li><a href="">...</a></li>
+ <li><a href="">...</a></li>
+ <li><a href="">...</a></li>
+ </ul>
+ </td>
+ </tr>
+ </table>
+ <table style="width:100%;">
+ <tr>
+ <td style="width:15%">
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:10%;position:relative;">
+ <img style="position:absolute;height:90%;vertical-align:bottom;" src="_static/change_icon.png">
+ </div>
+ <h2><a href="changelog.html">Changelog</a></h2>
+ <ul>
+ <li><a href="changelog.html#ref-v71">v7.1</a></li>
+ <li><a href="changelog.html#ref-v704">v7.0.4</a></li>
+ <li><a href="changelog.html#ref-v703">v7.0.3</a></li>
+ <li><a href="changelog.html#ref-v60">v6</a></li>
+ </ul>
+ </td>
+ <td style="width:30%;height:150px;">
+ <div style="width:100%;height:60px;margin-left:10%;position:relative;">
+ <img style="position:absolute;height:100%;vertical-align:bottom;" src="_static/help_icon.png">
+ </div>
+ <h2><a href="support.html">Support</a></h2>
+ <ul>
+ <li><a href="support.html#ref-ticket-system">Ticket system</a></li>
+ <li><a href="support.html#ref-mailing-list">Mailing list</a></li>
+ <li><a href="Support/known_bugs_issues.html">Known bugs or issues</a></li>
+ <li><a href="Support/faq.html">FAQ</a></li>
+ </ul>
+ </td>
+ <td style="width:10%">
+ </td>
+ </tr>
+ </table>
+ <p></p>
+
+.. note::
+
+ .. figure:: _static/cc-by-40.png
+ :width: 100px
+
+ This work is licensed under the Creative Commons Attribution 4.0
+ International License. To view a copy of this license, visit
+ http://creativecommons.org/licenses/by/4.0/ or send a letter to
+ Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
+
+.. toctree::
+ :maxdepth: 3
+ :caption: Table of Contents:
+
+ installation
+ first_steps
+ ecmwf_data
+ documentation
+ evaluation
+ dev_guide
+ changelog
+ support
+ Support/faq
+ authors
+
+
+.. Indices and tables
+.. ==================
+
+.. * :ref:`genindex`
+.. * :ref:`modindex`
+.. * :ref:`search`
+
diff --git a/for_developers/Sphinx/source/installation.rst b/for_developers/Sphinx/source/installation.rst
new file mode 100644
index 0000000000000000000000000000000000000000..d55515290cb11b6fc079f89ac00b10aef9fe0fb1
--- /dev/null
+++ b/for_developers/Sphinx/source/installation.rst
@@ -0,0 +1,940 @@
+************
+Installation
+************
+
+.. role:: underline
+ :class: underline
+
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+.. _Python 3: https://docs.python.org/3/
+.. _Python3: https://www.python.org/downloads/
+.. _Anaconda Python3: https://www.anaconda.com/distribution/#download-section
+
+.. _numpy: http://www.numpy.org/
+.. _ecmwf-api-client: https://confluence.ecmwf.int/display/WEBAPI/ECMWF+Web+API+Home
+.. _cdsapi: https://cds.climate.copernicus.eu/api-how-to
+.. _genshi: https://genshi.edgewall.org/
+.. _eccodes for python: https://packages.debian.org/sid/python3-eccodes
+.. _eccodes for conda: https://anaconda.org/conda-forge/eccodes
+.. _gfortran: https://gcc.gnu.org/wiki/GFortran
+.. _fftw3: http://www.fftw.org
+.. _eccodes: https://software.ecmwf.int/wiki/display/ECC
+.. _emoslib: https://software.ecmwf.int/wiki/display/EMOS/Emoslib
+.. _member state: https://www.ecmwf.int/en/about/who-we-are/member-states
+.. _registration form: https://apps.ecmwf.int/registration/
+.. _CDS API registration: https://cds.climate.copernicus.eu/user/register
+.. _ECMWF ectrans site: https://confluence.ecmwf.int/display/ECAC/Unattended+file+transfer+-+ectrans
+.. _ECaccess Presentation: https://confluence.ecmwf.int/download/attachments/45759146/ECaccess.pdf
+.. _ECMWF's instructions on gateway server: https://confluence.ecmwf.int/display/ECAC/ECaccess+Home
+.. _Computing Representative: https://www.ecmwf.int/en/about/contact-us/computing-representatives
+.. _MARS access: https://confluence.ecmwf.int//display/WEBAPI/Access+MARS
+
+.. _download section: https://www.flexpart.eu/downloads
+
+
+
+``flex_extract`` is a software package which contains a mix of Python and Shell scripts as well as a Fortran program. These components rely on a couple of third party libraries which need to be prepared first before starting the installation process. For now, the software is only tested for a Linux/Unix environment. Feel free to try it out on other platforms.
+
+Start with the decision of which `user group <Ecmwf/access>`_ you belong to and follow the instructions at :ref:`ref-registration` to get an account at ECMWF. Considering your user group and the method of applying ``flex_extract`` there appear to be 4 application modes:
+
+- Remote (for member state users only) :ref:`[installation]<ref-remote-mode>`
+- Gateway (for member state users only) :ref:`[installation]<ref-gateway-mode>`
+- Local member :ref:`[installation]<ref-local-mode>`
+- Local public :ref:`[installation]<ref-local-mode>`
+
+More information can be found in :doc:`Documentation/Overview/app_modes`.
+
+.. note::
+
+ If you encounter any problems in the installation process, you can ask for :doc:`support`.
+
+
+
+
+
+.. _ref-registration:
+
+Registration at ECMWF
+=====================
+
+Decide which user group you belong to and follow the instructions for registration:
+
+**Member state user**:
+ To get a member-state user account, users have to be a resident of a `member state`_. In that case, you can contact your `Computing Representative`_ for granting access. If you would like to use the local application mode to retrieve **ERA5** data you'd have to register at the `Copernicus Climate Data Store <https://cds.climate.copernicus.eu/user/register>`_ also.
+
+**Public user**:
+ To be able to download all intended public datasets with ``flex_extract`` such as **ERA-Interim**, **CERA-20C** and **ERA5**, the public user has to create 2 accounts.
+ At first, registration at the ECMWF website by filling out this `registration form`_ is needed to be able to retrieve *ERA-Interim* and *CERA-20C* data. For the retrievement of *ERA5* a registration at the `Copernicus Climate Data Store <https://cds.climate.copernicus.eu/user/register>`_ is needed in addition.
+
+
+
+
+
+
+.. _ref-licence:
+
+Agree on Licences for Public Datasets
+=====================================
+
+Each public dataset which is intended to be downloaded by ``flex_extract`` has its own licence which has to be accepted, regardless of the user group.
+
+For the *ERA-Interim* and *CERA-20C* datasets this can be done at the ECMWF website `Available ECMWF Public Datasets <https://confluence.ecmwf.int/display/WEBAPI/Available+ECMWF+Public+Datasets>`_. Log in and follow the licence links on the right side for each dataset and accept it.
+
+For the *ERA5* dataset this has to be done at the `Climate Data Store (CDS) website <https://cds.climate.copernicus.eu/cdsapp#!/search?type=dataset>`_. Log in with your credentials and then select on the left panel the product type "Reanalysis" for finding *ERA5* datasets. Then follow the link of a title with *ERA5* (anyone) to the full dataset record, click on tab "Download data" and scroll down. There is a section "Terms of use" where you have to click the :underline:`Accept terms` button.
+
+
+
+
+
+
+.. _ref-download:
+
+Download ``flex_extract``
+=========================
+
+There are 2 options to download ``flex_extract``:
+
+tar ball
+ You can download the latest prepared release tar ball from the `download section`_
+ of our ``FLEXPART`` community website and then untar the file. Substitute
+ the **<ID>** in the ``wget`` command with the ID-number of the ``flex_extract``
+ release tar ball in the list of downloads at the community website.
+
+
+ .. code-block:: bash
+
+ wget https://www.flexpart.eu/downloads/<ID>
+ tar -xvf <flex_extract_vX.X.tar>
+
+git repo
+ Or you can clone the current release version from our git repository master branch.
+
+ .. code-block:: bash
+
+ $ git clone https://www.flexpart.eu/gitmob/flexpart
+
+
+
+
+
+.. _ref-requirements:
+
+Environment Requirements
+========================
+
+This is a list of the general environment requirements for ``flex_extract``.
+What is required exactly for each application mode will be described in the specifc installation section.
+
+
+To run the python part of ``flex_extract`` a `Python 3`_ environment is needed.
+We tested ``flex_extract`` with a normal Linux Python package distribution and Anaconda Python.
+Except for `Python3`_ all are python packages which can be installed via ``pip``.
+
+* `Python3`_ or `Anaconda Python3`_
+* `numpy`_
+* `ecmwf-api-client`_ (Web Interface to ECMWF servers for datasets except ERA5)
+* `cdsapi`_ (Web Interface to `C3S <https://climate.copernicus.eu/>`_ servers for ERA5)
+* `genshi`_
+* `eccodes for python`_
+
+For the Fortran part of ``flex_extract`` we need the following distribution packages:
+
+* `gfortran`_
+* `fftw3`_
+* `eccodes`_
+* `emoslib`_
+
+
+
+
+
+
+.. _ref-install-fe:
+
+Installation of ``flex_extract``
+================================
+
+The actual installation of ``flex_extract`` will be done by executing a `Shell` script called ``setup.sh``.
+It defines some parameters and calls a Python script by giving the parameters as command line arguments.
+More information on the script and its parameters can be found at :doc:`Documentation/Input/setup`.
+
+For each application mode installation section we describe the requirements for the explicit
+environment and how it is installed, test if it works and how the actual ``flex_extract``
+installation has to be done. At the users local side not all software has to be present for ``flex_extract``.
+
+
+
+
+
+
+.. _ref-remote-mode:
+
+Remote Mode
+-----------
+
+.. _ref-req-remote:
+
+Remote Environment Requirements
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+The environment for ``flex_extract`` on ECMWF servers has to provide these
+software packages and libraries:
+
++---------------------------+-----------------+
+| Python part | Fortran part |
++---------------------------+-----------------+
+| * `Python3`_ | * `gfortran`_ |
+| * `numpy`_ | * `fftw3`_ |
+| * `genshi`_ | * `eccodes`_ |
+| * `eccodes for python`_ | * `emoslib`_ |
++---------------------------+-----------------+
+
+
+.. _ref-prep-remote:
+
+Prepare Remote Environment
+^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+The environment on the ECMWF server (such as *ecgate* or *cca*) is already
+prepared. ECMWF server provide all libraries via a module system which is
+going to be selected by ``flex_extract`` automatically.
+
+
+.. _ref-install-remote:
+
+Remote Installation
+^^^^^^^^^^^^^^^^^^^
+
+First, log in on one of the ECMWF Linux server, such as *ecgate* or *cca/ccb*.
+Substitute *<ecuid>* with your ECMWF user name:
+
+.. code-block:: bash
+
+ ssh -X <ecuid>@ecaccess.ecmwf.int
+
+This will lead to the following output on the command line, asking for your
+password:
+
+.. code-block:: bash
+
+ Authorized access only.
+
+ ***************************************************************
+ For further information, read the ECaccess documentation at:
+
+ https://software.ecmwf.int/wiki/display/ECAC/ECaccess+Home
+
+ You can also use ECaccess to load & download files from your
+ EChome, ECscratch or ECfs directories using the ECaccess FTP
+ server:
+
+ ftp://uid@ecaccess.ecmwf.int/
+
+ Please note you must use your UID and ActivID code to login!
+ ***************************************************************
+
+ <ecuid>@131.130.157.5's password: ***
+ Select hostname (ecgate, cca, ccb) [ecgate]: ecgate
+
+ [<ecuid>@ecgb11 ~]$
+
+
+Then, copy the ``flex_extract`` tar ball (from section :ref:`ref-download`)
+to the ``$HOME`` directory of the ECMWF Linux server via ``scp``.
+Substitute the *<localuser>* and *<server.edu>* placeholders with your credentials.
+Untar the file and change into the ``flex_extract`` root directory.
+
+.. code-block:: bash
+
+ scp <localuser>@<server.edu>:/path/to/tarfile/flex_extract_vX.X.tar.gz $HOME/
+ cd $HOME
+ tar xvf flex_extract_vX.X.tar.gz
+ cd flex_extract_vX.X
+
+
+On these ECMWF servers, it is not necessary to prepare the environment or the
+``Makefile`` for the Fortran program (``CONVERT2``) as described above.
+All third party libraries are available from a module system. The ``Makefile``
+is optimized for ECMWF servers and the compilation
+script ``compilejob.ksh``, which will be submitted by ``flex_extract`` to the
+batch job queue at ECMWF, does load all relevant modules from the ECMWF's module system.
+
+So there is just the need to execute the ``setup.sh`` script from the
+``flex_extract`` root directory for installation.
+Before executing it, it is necessary to adapt some parameters from ``setup.sh``
+described in :ref:`ref-setup`.
+
+Open ``setup.sh`` with your editor and adapt the values:
+
++----------------------------------------------+----------------------------------------------+
+| Take this for target = **ectrans** | Take this for target = **cca** |
++----------------------------------------------+----------------------------------------------+
+| .. code-block:: bash | .. code-block:: bash |
+| | |
+| ... | ... |
+| # -----------------------------------------| # -----------------------------------------|
+| # AVAILABLE COMMANDLINE ARGUMENTS TO SET | # AVAILABLE COMMANDLINE ARGUMENTS TO SET |
+| # | # |
+| # THE USER HAS TO SPECIFY THESE PARAMETER | # THE USER HAS TO SPECIFY THESE PARAMETER |
+| # | # |
+| TARGET='ecgate' | TARGET='cca' |
+| MAKEFILE='Makefile.gfortran' | MAKEFILE='Makefile.CRAY' |
+| ECUID='uid' | ECUID='uid' |
+| ECGID='gid' | ECGID='gid' |
+| GATEWAY=None | GATEWAY=None |
+| DESTINATION=None | DESTINATION=None |
+| INSTALLDIR=None | INSTALLDIR='' |
+| JOB_TEMPLATE='job.template' | JOB_TEMPLATE='job.template' |
+| CONTROLFILE='CONTROL_EA5' | CONTROLFILE='CONTROL_EA5' |
+| ... | ... |
++----------------------------------------------+----------------------------------------------+
+
+:underline:`Please substitute the values of ECUID and ECGID
+with your own credentials and settings.`
+
+.. note::
+
+ If a local gateway server is available the transfer of files could be done
+ via the ``ECaccess`` commands. Therefore a valid *GATEWAY* and *DESTINATION*
+ have to be present and should be set in the ``setup.sh`` file.
+
+
+Afterwards, type:
+
+.. code-block:: bash
+
+ module load python3
+ ./setup.sh
+
+to start the installation. You should see the following output at the command line.
+
+
+.. code-block:: bash
+
+ # Output of setup.sh
+ Create tarball ...
+ Job compilation script has been submitted to ecgate for installation in ${HOME}/flex_extract_vX.X
+ You should get an email with subject "flexcompile" within the next few minutes!
+
+
+The email content should look like this with a "SUCCESS" statement in the last line:
+
+.. code-block:: bash
+
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp phgrreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp grphreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp ftrafo.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g rwGRIB2.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g posnam.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g preconvert.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -g -O3 -o ./CONVERT2 ftrafo.o phgrreal.o grphreal.o rwGRIB2.o posnam.o preconvert.o -L/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/lib -leccodes_f90 -leccodes -ljasper -lpthread -L/usr/local/apps/jasper/1.900.1/LP64/lib -ljasper -lm -L/usr/local/apps/libemos/000455/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/libemos/000455/GNU/6.3.0/lib -lemos.R64.D64.I32 -L/usr/local/apps/fftw/3.3.4/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/fftw/3.3.4/GNU/6.3.0/lib -lfftw3
+ -rwxr-x---. 1 USER at 353134 May 23 12:27 CONVERT2
+ SUCCESS!
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+.. _ref-gateway-mode:
+
+Gateway Mode
+------------
+
+
+.. _ref-req-gateway:
+
+Gateway Environment Requirements
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+The environment on your local system has to provide these software packages
+and libraries, since ``flex_extract`` does only prepare the job script and send
+it to the ECMWF servers:
+
+* `Python3`_ or `Anaconda Python3`_
+* `numpy`_
+* `genshi`_
+
+
+.. _ref-prep-gateway:
+
+Prepare Gateway Environment
+^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+The easiest way to install all required packages is to use the package management system of your Linux distribution. To do so, it is necessary to use a user with admin rights.
+The installation was tested on a *Debian GNU/Linux buster/sid* and an *Ubuntu 18.04 Bionic Beaver* system.
+
+.. code-block:: sh
+
+ # On a Linux Debian or Ubuntu system do
+ # (if not already available):
+ sudo apt -PV install python3
+ sudo apt -PV install pip
+ pip install genshi
+ pip install numpy
+
+
+.. _ref-test-gateway:
+
+Test Gateway Environment
+^^^^^^^^^^^^^^^^^^^^^^^^
+
+Check the availability of the python packages by typing ``python3`` in
+a terminal window and run the ``import`` commands in the python shell.
+If there are no error messages, you succeeded in setting up the environment.
+
+.. code-block:: python
+
+ # check in python3 console
+ import genshi
+ import numpy
+
+
+
+.. _ref-install-gateway:
+
+Gateway Installation
+^^^^^^^^^^^^^^^^^^^^
+
+In this mode, access to the ECMWF computing and archiving facilities is enabled through an ECaccess gateway server on a local member state server. The ECaccess framework is necessary to interactively submit jobs to the ECMWF batch system and to transfer files between ECMWF and local gateway server.
+
+Please see `ECMWF's instructions on gateway server`_ to establish the gateway server if not already in place.
+Additionally, to be able to use the Ecaccess file transfer service **ectrans** please also create an association.
+The easiest way is to visit the ECaccess Member State Gateway website (e.g. msgatway.ecmwf.int) and follow the instructions in the short `ECaccess Presentation`_ (page 17 ff.). Additional documentation can be found on the `ECMWF ectrans site`_.
+
+After everything is set up you have to create an *ecaccess certificate* to be able to send and receive files from and to the ECMWF server. You can do this by using the ``ecaccess-certificate-create`` command on the gateway server. You will be prompted for your ECMWF member state user name and a password (which will be usually generated by a Token). This certificate has to be re-newed periodically (every 7 days).
+
+.. code-block:: bash
+
+ $ ecaccess-certificate-create
+ Please enter your user-id: example_username
+ Your passcode: ***
+
+``Flex_extract`` will be run on an ECMWF server which makes the setup the same as for the **remote mode**. In the ``setup.sh`` script :ref:`[ref] <ref-setup>`, select the ``Makefile.gfortran`` for the ``CONVERT2`` Fortran program and the ECMWF server (*target*) you would like to use.
+The job script, send to the job queue via the ECaccess software, selects again automatically the correct libraries from the module system. For enableing the file transfer you have to set the *ECUID*, *ECGID*, *GATEWAY* and *DESTINATION* parameter values.
+
+
+.. code-block:: bash
+ :caption: 'Example settings for a gateway installation.'
+ :name: setup.sh
+
+ # -----------------------------------------------------------------
+ # AVAILABLE COMMANDLINE ARGUMENTS TO SET
+ #
+ # THE USER HAS TO SPECIFY THESE PARAMETER
+ #
+ TARGET='ecgate'
+ MAKEFILE='Makefile.gfortran'
+ ECUID='uid'
+ ECGID='gid'
+ GATEWAY='server.example.edu'
+ DESTINATION='example@genericSftp'
+ INSTALLDIR=None
+ JOB_TEMPLATE='job.template'
+ CONTROLFILE='CONTROL_EA5'
+
+
+Afterwards, type:
+
+.. code-block:: bash
+
+ $ ./setup.sh
+
+to start the installation. You should see the following output at the command line.
+
+
+.. code-block:: bash
+
+ # Output of setup.sh
+ Create tarball ...
+ Job compilation script has been submitted to ecgate for installation in ${HOME}/flex_extract_vX.X
+ You should get an email with subject "flexcompile" within the next few minutes!
+
+
+The email content should look like this with a "SUCCESS" statement in the last line:
+
+.. code-block:: bash
+
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp phgrreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp grphreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp ftrafo.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g rwGRIB2.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g posnam.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -I. -I/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/include -g preconvert.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -g -O3 -o ./CONVERT2 ftrafo.o phgrreal.o grphreal.o rwGRIB2.o posnam.o preconvert.o -L/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/eccodes/2.12.0/GNU/6.3.0/lib -leccodes_f90 -leccodes -ljasper -lpthread -L/usr/local/apps/jasper/1.900.1/LP64/lib -ljasper -lm -L/usr/local/apps/libemos/000455/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/libemos/000455/GNU/6.3.0/lib -lemos.R64.D64.I32 -L/usr/local/apps/fftw/3.3.4/GNU/6.3.0/lib -Wl,-rpath,/usr/local/apps/fftw/3.3.4/GNU/6.3.0/lib -lfftw3
+ -rwxr-x---. 1 USER at 353134 May 23 12:27 CONVERT2
+ SUCCESS!
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+.. _ref-local-mode:
+
+Local Mode
+----------
+
+
+
+.. _ref-req-local:
+
+Local Environment Requirements
+^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
+
+For the local access modes **member** and **public** there is no difference in
+the installation process.
+
+The environment on your local system has to provide these software packages
+and libraries, since all extraction and preparation is done at the local system:
+
++------------------------------------------------+-----------------+
+| Python part | Fortran part |
++------------------------------------------------+-----------------+
+| * `Python3`_ | * `gfortran`_ |
+| * `numpy`_ | * `fftw3`_ |
+| * `genshi`_ | * `eccodes`_ |
+| * `eccodes for python`_ | * `emoslib`_ |
+| * `ecmwf-api-client`_ (everything except ERA5) | |
+| * `cdsapi`_ (just for ERA5) | |
++------------------------------------------------+-----------------+
+
+
+.. _ref-prep-local:
+
+Prepare Local Environment
+^^^^^^^^^^^^^^^^^^^^^^^^^
+
+The easiest way to install all required packages is to use the package management system of your Linux distribution. To do so, it is necessary to use a user with admin rights.
+The installation was tested on a *Debian GNU/Linux buster/sid* and an *Ubuntu 18.04 Bionic Beaver* system.
+
+.. code-block:: sh
+
+ # On a Linux Debian or Ubuntu system do
+ # (if not already available):
+ sudo apt -PV install python3
+ sudo apt -PV install pip
+ sudo apt -PV install gfortran
+ sudo apt -PV install fftw3-dev
+ sudo apt -PV install libeccodes-dev
+ sudo apt -PV install libemos-dev
+ sudo apt -PV install python3-eccodes
+ pip install genshi
+ pip install numpy
+ pip install cdsapi
+ pip install ecmwf-api-client
+
+.. note::
+
+ In case you would like to use Anaconda Python we recommend you follow the installation instructions of
+ `Anaconda Python Installation for Linux <https://docs.anaconda.com/anaconda/install/linux/>`_ and then install the
+ ``eccodes`` package from ``conda`` with:
+
+ .. code-block:: bash
+
+ conda install conda-forge::python-eccodes
+
+
+The CDS API (cdsapi) and the ECMWF Web API (ecmwf-api-client) have both to be installed since ERA5 can only be retrieved with the ``CDS API`` and all other datasets with the ``ECMWF Web API``.
+
+Both user groups have to provide key's with their credentials for the Web API's in their home directory. Therefore, follow these instructions:
+
+ECMWF Web API:
+ Go to `MARS access`_ website and log in with your credentials. Afterwards, on this site in section "Install ECMWF KEY" the key for the ECMWF Web API should be listed. Please follow the instructions in this section under point 1 (save the key in a file `.ecmwfapirc` in your home directory).
+
+CDS API:
+ Go to 'CDS API registration'_ and register there too. Log in at the `cdsapi`_ website and follow the instructions at section "Install the CDS API key" to save your credentials in a `.cdsapirc` file.
+
+
+.. _ref-test-local:
+
+Test Local Environment
+^^^^^^^^^^^^^^^^^^^^^^
+
+Check the availability of the system packages with ``dpkg -s <package-name> | grep Status`` or ``rpm -q <package_name>``, depending on your system. For example:
+
+.. code-block:: sh
+
+ $ dpkg -s libeccodes-dev | grep Status
+ # or
+ $ rpm -q libeccodes-dev
+
+Afterwards, check the availability of the python packages by typing ``python3`` in
+a terminal window and run the ``import`` commands in the python shell. If there are no error messages, you succeeded in setting up the environment.
+
+.. code-block:: python
+
+ # check in python3 console
+ import eccodes
+ import genshi
+ import numpy
+ import cdsapi
+ import ecmwfapi
+
+
+
+Test the Web API's
+""""""""""""""""""
+
+You can start very simple test retrievals for both Web API's to be sure that everything works. This is recommended to minimize the range of possible errors using ``flex_extract`` later on.
+
+ECMWF Web API
+"""""""""""""
+
+**Member user**
+ Please use this piece of python code:
+
+ .. code-block:: python
+
+ from ecmwfapi import ECMWFService
+
+ server = ECMWFService('mars')
+
+ server.retrieve({
+ 'stream' : "oper",
+ 'levtype' : "sfc",
+ 'param' : "165.128/166.128/167.128",
+ 'dataset' : "interim",
+ 'step' : "0",
+ 'grid' : "0.75/0.75",
+ 'time' : "00/06/12/18",
+ 'date' : "2014-07-01/to/2014-07-31",
+ 'type' : "an",
+ 'class' : "ei",
+ 'target' : "download_erainterim_ecmwfapi.grib"
+ })
+
+
+**Public user**
+ Please use this piece of python code:
+
+ .. code-block:: python
+
+ from ecmwfapi import ECMWFDataServer
+
+ server = ECMWFDataServer()
+
+ server.retrieve({
+ 'stream' : "enda",
+ 'levtype' : "sfc",
+ 'param' : "165.128/166.128/167.128",
+ 'dataset' : "cera20c",
+ 'step' : "0",
+ 'grid' : "1./1.",
+ 'time' : "00/06/12/18",
+ 'date' : "2000-07-01/to/2000-07-31",
+ 'type' : "an",
+ 'class' : "ep",
+ 'target' : "download_cera20c_ecmwfapi.grib"
+ })
+
+CDS API
+"""""""
+
+Since ERA5 extraction with CDS API might take some time due to the very high number of requests, you can start by retrieving some online stored pressure levels (not from MARS). This is usually much faster and gives a quick result to find out if the web API works:
+
+**All users**
+ Please use this piece of python code:
+
+ .. code-block:: python
+
+ import cdsapi
+
+ c = cdsapi.Client()
+
+ c.retrieve("reanalysis-era5-pressure-levels",
+ {
+ "variable": "temperature",
+ "pressure_level": "1000",
+ "product_type": "reanalysis",
+ "year": "2008",
+ "month": "01",
+ "day": "01",
+ "time": "12:00",
+ "format": "grib"
+ },
+ "download_cdsapi.grib")
+
+
+Afterwards, when you know that the CDS API generally works, you can try to extract some
+data from the MARS archive. From the latest experience this can take a while.
+
+**Member user**
+ Please use this piece of python code:
+
+ .. code-block:: python
+
+ import cdsapi
+
+ c = cdsapi.Client()
+
+ c.retrieve('reanalysis-era5-complete',
+ {
+ 'class' : 'ea',
+ 'expver' : '1',
+ 'stream' : 'oper',
+ 'type' : 'fc',
+ 'step' : '3/to/12/by/3',
+ 'param' : '130.128',
+ 'levtype' : 'ml',
+ 'levelist': '135/to/137',
+ 'date' : '2013-01-01',
+ 'time' : '06/18',
+ 'area' : '50/-5/40/5',
+ 'grid' : '1.0/1.0',
+ 'format' : 'grib',
+ }, 'download_era5_cdsapi.grib')
+
+
+**Public user**
+ Please use this piece of python code:
+
+ .. code-block:: python
+
+ import cdsapi
+
+ c = cdsapi.Client()
+
+ c.retrieve('reanalysis-era5-complete',
+ {
+ 'class' : 'ea',
+ 'dataset' : 'era5',
+ 'expver' : '1',
+ 'stream' : 'oper',
+ 'type' : 'fc',
+ 'step' : '3/to/12/by/3',
+ 'param' : '130.128',
+ 'levtype' : 'ml',
+ 'levelist': '135/to/137',
+ 'date' : '2013-01-01',
+ 'time' : '06/18',
+ 'area' : '50/-5/40/5',
+ 'grid' : '1.0/1.0',
+ 'format' : 'grib',
+ }, 'download_era5_cdsapi.grib')
+
+
+
+
+
+
+.. _ref-install-local:
+
+Local Installation
+^^^^^^^^^^^^^^^^^^
+
+First prepare the Fortran ``Makefile`` for your environment and set it
+in the ``setup.sh`` script. (See section :ref:`ref-convert` for information on
+the Fortran program.)
+``flex_extract`` has already two ``Makefiles`` prepared for te ``gfortran`` and
+the ``ifort`` compiler:
+
+ *Makefile.local.gfortran
+ *Makefile.local.ifort
+
+They can be found in the path ``flex_extract_vX.X/source/fortran``, where
+``vX.X`` should be substituted with the current version number.
+
+.. caution::
+ It is necessary to adapt **ECCODES_INCLUDE_DIR** and **ECCODES_LIB** in these
+ ``Makefiles``.
+
+
+So starting from the root directory of ``flex_extract``,
+go to the ``Fortran`` source directory and open the ``Makefile`` of your
+choice to modify with an editor of your choice. We use the ``nedit`` in this case.
+
+.. code-block:: bash
+
+ cd flex_extract_vX.X/source/fortran
+ nedit Makefile.local.gfortran
+
+Edit the pathes to the ``eccodes`` library on your local machine.
+
+.. caution::
+ This can vary from system to system.
+ It is suggested to use a command like
+
+ .. code-block:: bash
+
+ # for the ECCODES_INCLUDE_DIR path do:
+ $ dpkg -L libeccodes-dev | grep eccodes.mod
+ # for the ECCODES_LIB path do:
+ $ dpkg -L libeccodes-dev | grep libeccodes.so
+
+ to find out the path to the ``eccodes`` library.
+
+Substitute these paths in the ``Makefile`` for parameters **ECCODES_INCLUDE_DIR**
+and **ECCODES_LIB** and save it.
+
+.. code-block:: bash
+
+ # these are the paths on a current Debian 10 Testing system (May 2019)
+ ECCODES_INCLUDE_DIR=/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/
+ ECCODES_LIB= -L/usr/lib -leccodes_f90 -leccodes -lm
+
+
+The Fortran program called ``CONVERT2`` will be compiled during the
+installation process to get an executable. Therefore the ``Makefile``
+has to be set in the ``setup.sh`` script.
+
+In the root directory of ``flex_extract``, open the ``setup.sh`` script
+and adapt the installation parameters in the section labelled with
+"AVAILABLE COMMANDLINE ARGUMENTS TO SET" like shown below.
+
+
+.. code-block:: bash
+ :caption: 'Example settings for a local installation.'
+ :name: setup.sh
+
+ ...
+ # -----------------------------------------------------------------
+ # AVAILABLE COMMANDLINE ARGUMENTS TO SET
+ #
+ # THE USER HAS TO SPECIFY THESE PARAMETER
+ #
+ TARGET='local'
+ MAKEFILE='Makefile.local.gfortran'
+ ECUID=None
+ ECGID=None
+ GATEWAY=None
+ DESTINATION=None
+ INSTALLDIR=None
+ JOB_TEMPLATE='job.template'
+ CONTROLFILE='CONTROL_EA5'
+ ...
+
+
+Afterwards, type:
+
+.. code-block:: bash
+
+ $ ./setup.sh
+
+to start the installation. You should see the following output at the command line.
+
+
+.. code-block:: bash
+
+ # Output of setup.sh
+ WARNING: installdir has not been specified
+ flex_extract will be installed in here by compiling the Fortran source in /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1/source/fortran
+ Install flex_extract_v7.1 software at local in directory /raid60/nas/tmc/Anne/Interpolation/flexextract/flex_extract_v7.1
+
+ Using makefile: Makefile.local.gfortran
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp phgrreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp grphreal.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -g -O3 -fopenmp ftrafo.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 rwGRIB2.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 posnam.f
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -c -O3 -fopenmp -I. -I/usr/local/gcc-4.9.3/grib_api-1.14.3/include -O3 preconvert.f90
+ gfortran -m64 -fdefault-real-8 -fcray-pointer -fno-second-underscore -ffixed-line-length-132 -fopenmp -fconvert=big-endian -O3 -O3 -fopenmp -o ./CONVERT2 ftrafo.o phgrreal.o grphreal.o rwGRIB2.o posnam.o preconvert.o -L/usr/local/gcc-4.9.3/grib_api-1.14.3/lib -Bstatic -lgrib_api_f77 -lgrib_api_f90 -lgrib_api -Bdynamic -lm -ljasper -lemosR64
+
+ -rwxrwxr-x. 1 philipa8 tmc 282992 May 23 22:27 ./CONVERT2
+
+
+
+
+
+
+``Flex_extract`` in combination with ``FLEXPART``
+=================================================
+
+Some users might like to incorporate ``flex_extract`` directly into the ``FLEXPART``
+distribution. Then the installation path has to be changed by setting the parameter
+`installdir` in the ``setup.sh`` file to the ``script`` directory in the ``FLEXPART`` root directoy.
+
+
+
+
+
+
+
+
+
+.. _ref-testinstallfe:
+
+Test installation
+=================
+
+Fortran program test
+--------------------
+
+To check if the compilation of the Fortran program ``CONVERT2`` was successful
+a quick program call on a minimal prepared dataset can be done.
+
+For this, go from the ``flex_extract`` root directory to the test
+directory and call the executable of the Fortran program.
+
+.. note::
+ Remember that you might have to log in at the ECMWF server if you used the installation for the **remote** or **gateway** mode. There you find the ``flex_extract`` root directory in your ``$HOME`` directory.
+
+.. code-block:: bash
+
+ cd test/Installation/Convert
+ # call the Fortran progam without arguments
+ ../../../source/fortran/CONVERT2
+
+The installation was successfull if it showed the following output:
+
+.. code-block:: bash
+
+ readspectral: 1 records read
+ readlatlon: 8 records read
+ STATISTICS: 98842.4598 98709.7359 5120.5385
+ readlatlon: 4 records read
+ readlatlon: 4 records read
+ readlatlon: 4 records read
+ SUCCESSFULLY FINISHED CONVERT_PRE: CONGRATULATIONS
+
+Now go back to the root directoy:
+
+.. code-block:: bash
+
+ $ cd ../../../
+
+
+Mars request test
+-----------------
+
+ IN PREPARATION ...
+
+Full test
+---------
+
+ IN PREPARATION ...
+
+
diff --git a/for_developers/Sphinx/source/support.rst b/for_developers/Sphinx/source/support.rst
new file mode 100644
index 0000000000000000000000000000000000000000..1bfcc5e5b6e1482401bcbe267a86a96d54ed74b5
--- /dev/null
+++ b/for_developers/Sphinx/source/support.rst
@@ -0,0 +1,65 @@
+Support
+=======
+.. toctree::
+ :hidden:
+ :maxdepth: 2
+
+
+.. contents::
+ :local:
+ :depth: 2
+
+.. _ref-ticket-system:
+
+Ticket system
+-------------
+.. _ticket system: https://www.flexpart.eu/report/1
+
+The community website http://flexpart.eu contains a
+`ticket system`_ which can be used to report any issue or a proposition for a new feature.
+
+The tickets can be viewed by anyone, to create a ticket a registration is necessary. Since the automatic registration is unavailable, please send an email to the ``flexpart.eu[at]zamg.ac.at`` and you will receive your credentials (with some delay).
+
+
+.. _ref-mailing-list:
+
+Mailing list
+------------
+
+The mailing list is mainly for the ``FLEXPART`` users to ask questions or share experiences regarding the whole ``FLEXPART`` process with the community. This can be a lot faster than asking only the developers for help. Since ``flex_extract`` is a preprocessor to ``FLEXPART`` this is the right place to ask for help.
+
+Additionally, from time to time, there will be announcements for all FLEXPART users, such as new release versions of ``FLEXPART`` or ``flex_extract``.
+
+Just write a mail to: ``flexpart[at]lists.univie.ac.at``
+
+
+.. _ref-reporting:
+
+Reporting an issue
+------------------
+
+To properly report a problem or bug, please provide as much information as possible.
+This includes:
+
+* the flex_extract version
+* a flex_extract log file (output of submit.py script)
+* the CONTROL file
+* the commandline arguments or run(_local).sh settings and
+* a description of the environment you used (Unix/Linux version, library version, application mode, etc.).
+
+
+.. _ref-known-issues:
+
+Known bugs and issues
+---------------------
+A collection of reported and detected bugs and issues with solutions can be found :doc:`here <Support/known_bugs_issues>`.
+
+
+.. _ref-faq:
+
+FAQ
+---
+A list of frequently asked questions and hints for the application of ``flex_extract`` can be found :doc:`here <Support/faq>`.
+
+
+
diff --git a/run/control/CONTROL_CERA b/run/control/CONTROL_CERA
index e69bee09571f3cf603e197522dd76e589f5e9315..1879d61e29e8ad0cccd6b2fdd97eea362b13f54b 100644
--- a/run/control/CONTROL_CERA
+++ b/run/control/CONTROL_CERA
@@ -9,15 +9,14 @@ ACCMAXSTEP 24
CLASS EP
NUMBER 0
STREAM ENDA
-GRID 1000
-LEFT -24000
-LOWER 10000
-UPPER 74000
-RIGHT 60000
+GRID 1.
+LEFT -24.
+LOWER 10.
+UPPER 74.
+RIGHT 60.
LEVELIST 1/to/91
RESOL 159
ETA 1
-ADDPAR 27/28/173/186/187/188/235/139/39
CWC 1
PREFIX CE
ECTRANS 1
diff --git a/run/control/CONTROL_CERA.compare b/run/control/CONTROL_CERA.global
similarity index 62%
rename from run/control/CONTROL_CERA.compare
rename to run/control/CONTROL_CERA.global
index 221a5159392eb5597e30fc5e88a1c77bc78552c5..a4d688d7a930450950ea09b92f110540e8d8fa2a 100644
--- a/run/control/CONTROL_CERA.compare
+++ b/run/control/CONTROL_CERA.global
@@ -1,4 +1,3 @@
-# This is a comment line
START_DATE
DTIME 3
TYPE AN AN AN AN AN AN AN AN
@@ -8,18 +7,16 @@ ACCTYPE FC
ACCTIME 18
ACCMAXSTEP 24
CLASS EP
-STREAM ENDA
NUMBER 0
+STREAM ENDA
GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 85/to/91
+LEFT -179.
+LOWER -90.
+UPPER 90.
+RIGHT 180.
+LEVELIST 1/to/91
RESOL 159
ETA 1
-ADDPAR CVL/CVH/LCC/MCC/HCC/SKT/STL1/SWVL1/SR
CWC 1
PREFIX CE
ECTRANS 1
-RRINT 1
diff --git a/run/control/CONTROL_CERA.public b/run/control/CONTROL_CERA.public
index c9e4c133d52418fc65b2c07d50b8ab03cb6246c2..1dd27dbcba6b69f223259f71d161c34d4ef2b399 100644
--- a/run/control/CONTROL_CERA.public
+++ b/run/control/CONTROL_CERA.public
@@ -10,15 +10,13 @@ CLASS EP
DATASET cera20c
STREAM ENDA
NUMBER 0
-GRID 2000
-LEFT -24000
-LOWER 10000
-UPPER 74000
-RIGHT 60000
+GRID 1.
+LEFT -179.
+LOWER -90.
+UPPER 90.
+RIGHT 180.
LEVELIST 1/to/91
RESOL 106
ETA 1
-ADDPAR 27/28/173/186/187/188/235/139/39
CWC 1
-PREFIX CE
-ECTRANS 1
+PREFIX CEpub
diff --git a/run/control/CONTROL_CERA.testgrid b/run/control/CONTROL_CERA.testgrid
deleted file mode 100644
index 221a5159392eb5597e30fc5e88a1c77bc78552c5..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_CERA.testgrid
+++ /dev/null
@@ -1,25 +0,0 @@
-# This is a comment line
-START_DATE
-DTIME 3
-TYPE AN AN AN AN AN AN AN AN
-TIME 00 03 06 09 12 15 18 21
-STEP 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 18
-ACCMAXSTEP 24
-CLASS EP
-STREAM ENDA
-NUMBER 0
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 85/to/91
-RESOL 159
-ETA 1
-ADDPAR CVL/CVH/LCC/MCC/HCC/SKT/STL1/SWVL1/SR
-CWC 1
-PREFIX CE
-ECTRANS 1
-RRINT 1
diff --git a/run/control/CONTROL_CF.testgrid b/run/control/CONTROL_CF.testgrid
deleted file mode 100644
index 746bb94c274a4a009584ee8c5ba2c7886d76fa77..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_CF.testgrid
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 3
-MAXSTEP 36
-TYPE CF
-TIME 12
-STEP 00
-ACCTYPE CF
-ACCTIME 12
-ACCMAXSTEP 36
-CLASS OD
-STREAM ENFO
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 85/to/91
-RESOL 159
-GAUSS 1
-ADDPAR /LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX CF
-ECTRANS 1
diff --git a/run/control/CONTROL_CV.testgrid b/run/control/CONTROL_CV.testgrid
deleted file mode 100644
index 90240b32f3547551b2cbf6b699c1a43ffac4ea2c..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_CV.testgrid
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 3
-MAXSTEP 36
-TYPE CV
-TIME 12
-STEP 00
-ACCTYPE CV
-ACCTIME 12
-ACCMAXSTEP 36
-CLASS OD
-STREAM ENFO
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 85/to/91
-RESOL 159
-GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX CV
-ECTRANS 1
diff --git a/run/control/CONTROL_E15.testgrid b/run/control/CONTROL_E15.testgrid
deleted file mode 100644
index 95920c5337702c0268b0868985bd0df8c2c75daa..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_E15.testgrid
+++ /dev/null
@@ -1,21 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN FC FC FC AN FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS EI
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 50/to/60
-RESOL 159
-GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EI
-ECTRANS 1
diff --git a/run/control/CONTROL_E40.testgrid b/run/control/CONTROL_E40.testgrid
deleted file mode 100644
index 8996259865fa46aade77a0aca9d17d2d6776180a..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_E40.testgrid
+++ /dev/null
@@ -1,21 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN FC FC FC AN FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS E4
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 50/to/60
-RESOL 159
-GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX E4_
-ECTRANS 1
diff --git a/run/control/CONTROL_EA5 b/run/control/CONTROL_EA5
index 982151f1705b39edd14f387d66a7a3b559aa0c2e..618a61c0a85d32acd5a574fd12d3d0a5295cdbb1 100644
--- a/run/control/CONTROL_EA5
+++ b/run/control/CONTROL_EA5
@@ -8,15 +8,14 @@ ACCTIME 06/18
ACCMAXSTEP 12
CLASS EA
STREAM OPER
-GRID 1000
-LEFT -25000
-LOWER 10000
-UPPER 75000
-RIGHT 60000
-LEVEL 137
+GRID 0.28125
+LEFT -100.
+LOWER 0.
+UPPER 60.
+RIGHT 60.
LEVELIST 1/to/137
-RESOL 159
+RESOL 639
ETA 1
-ADDPAR 186/187/188/235/139/39
+FORMAT GRIB2
PREFIX EA
ECTRANS 1
diff --git a/run/control/CONTROL_EA5.compare b/run/control/CONTROL_EA5.compare
deleted file mode 100644
index 27a505d713a315b30d6adfc69827e4096f54a402..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.compare
+++ /dev/null
@@ -1,23 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
-TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
-STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-CLASS EA
-STREAM OPER
-GRID 1.
-LEFT 0.
-LOWER 0.
-UPPER 5.
-RIGHT 5.
-LEVEL 137
-LEVELIST 130/to/137
-RESOL 159
-ETA 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EA
-ECTRANS 1
-CWC 1
diff --git a/run/control/CONTROL_EA5.atom b/run/control/CONTROL_EA5.global
similarity index 81%
rename from run/control/CONTROL_EA5.atom
rename to run/control/CONTROL_EA5.global
index 42363a2857acdecce0054b73da9c843a43bcc41d..55b909069680fb5f602d14d362ad9ef74ba01cb2 100644
--- a/run/control/CONTROL_EA5.atom
+++ b/run/control/CONTROL_EA5.global
@@ -1,4 +1,5 @@
-DTIME 3
+START_DATE
+DTIME 1
TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
@@ -7,15 +8,13 @@ ACCTIME 06/18
ACCMAXSTEP 12
CLASS EA
STREAM OPER
-GRID 1000
+GRID 1.
LEFT -179.
-LOWER 0.
+LOWER -90.
UPPER 90.
RIGHT 180.
-LEVELIST 60/to/137
+LEVELIST 1/to/137
RESOL 159
ETA 1
-ADDPAR 186/187/188/235/139/39
PREFIX EA
ECTRANS 1
-CWC 1
diff --git a/run/control/CONTROL_EA5.highres b/run/control/CONTROL_EA5.highres
deleted file mode 100644
index 63b307f8d5b99c0e4ac0cae5fe3c9481f85eea94..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.highres
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
-TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
-STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-CLASS EA
-STREAM OPER
-GRID 0.28125
-LEFT -100000
-LOWER 00000
-UPPER 60000
-RIGHT 60000
-LEVELIST 1/to/137
-RESOL 639
-ETA 1
-FORMAT GRIB2
-ADDPAR /186/187/188/235/139/39
-PREFIX EA
-ECTRANS 1
diff --git a/run/control/CONTROL_EA5.newgrid b/run/control/CONTROL_EA5.newgrid
deleted file mode 100644
index 78f9a8c27876b0e5944b8c93c6c8f1a6445446de..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.newgrid
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN AN AN AN AN AN AN AN
-TIME 00 03 06 09 12 15 18 21
-STEP 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-CLASS EA
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 10.
-UPPER 20.
-RIGHT 5.
-LEVEL 137
-LEVELIST 100/to/137
-RESOL 159
-ETA 1
-ADDPAR 186/187/188/235/139/39
-PREFIX EA
-ECTRANS 1
diff --git a/run/control/CONTROL_EA5.public b/run/control/CONTROL_EA5.public
index 08b11e16356c459ec83eabb226c5164b82daed92..2ee653fd775218ccebbd750c702a274b8cb5af76 100644
--- a/run/control/CONTROL_EA5.public
+++ b/run/control/CONTROL_EA5.public
@@ -9,14 +9,12 @@ ACCMAXSTEP 12
CLASS EA
DATASET ERA5
STREAM OPER
-GRID 1000
-LEFT -15000
-LOWER 30000
-UPPER 75000
-RIGHT 45000
+GRID 1.
+LEFT -179.
+LOWER -90.
+UPPER 90.
+RIGHT 180.
LEVELIST 1/to/137
RESOL 213
ETA 1
-ADDPAR 186/187/188/235/139/39
PREFIX EApub
-ECTRANS 1
diff --git a/run/control/CONTROL_EA5.saltrace b/run/control/CONTROL_EA5.saltrace
deleted file mode 100644
index 4ea88fa47c51fe3f3ca9977ba2278610b36ad6df..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.saltrace
+++ /dev/null
@@ -1,37 +0,0 @@
-DAY1
-DAY2
-DTIME 1
-TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
-TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
-STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-M_CLASS EA
-M_STREAM OPER
-M_NUMBER OFF
-M_EXPVER 1
-M_GRID 250
-M_LEFT -100000
-M_LOWER 00000
-M_UPPER 60000
-M_RIGHT 60000
-M_LEVELIST 60/to/137
-M_RESOL 799
-M_GAUSS 0
-M_ACCURACY 24
-M_OMEGA 0
-M_OMEGADIFF 0
-M_ETA 1
-M_ETADIFF 0
-M_DPDETA 1
-M_SMOOTH 0
-M_FORMAT GRIB2
-M_ADDPAR /186/187/188/235/139/39
-PREFIX EA
-ECSTORAGE 0
-ECTRANS 1
-ECFSDIR ectmp:/${USER}/econdemand/
-MAILOPS ${USER}
-MAILFAIL ${USER}
-EOF
diff --git a/run/control/CONTROL_EA5.test227 b/run/control/CONTROL_EA5.test227
deleted file mode 100644
index 71742421f5d56cfd4399ee67f16255f945b045b2..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.test227
+++ /dev/null
@@ -1,20 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
-TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
-STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-CLASS EA
-STREAM OPER
-GRID 0.25
-LEFT -179.75
-LOWER 0.
-UPPER 2.
-RIGHT 180.
-LEVELIST 130/to/137
-RESOL 799
-ETA 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EA
diff --git a/run/control/CONTROL_EA5.testgrid b/run/control/CONTROL_EA5.testgrid
deleted file mode 100644
index 41eb004a8ef77a4736625f9736693202e325a263..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EA5.testgrid
+++ /dev/null
@@ -1,23 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN AN
-TIME 00 01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 17 18 19 20 21 22 23
-STEP 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
-ACCTYPE FC
-ACCTIME 06/18
-ACCMAXSTEP 12
-CLASS EA
-STREAM OPER
-GRID 0.28125
-LEFT 0.
-LOWER 0.
-UPPER 2.25
-RIGHT 2.25
-LEVEL 137
-LEVELIST 130/to/137
-RESOL 799
-ETA 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EA
-ECTRANS 1
-RRINT 1
diff --git a/run/control/CONTROL_EI.chernobyl b/run/control/CONTROL_EI
similarity index 62%
rename from run/control/CONTROL_EI.chernobyl
rename to run/control/CONTROL_EI
index f6398c79e26c82c1107c7bd22c6254e74285e9a4..a5354aa33ec09899bbc220d4478c08cd2fd1125a 100644
--- a/run/control/CONTROL_EI.chernobyl
+++ b/run/control/CONTROL_EI
@@ -8,16 +8,14 @@ ACCTIME 00/12
ACCMAXSTEP 12
CLASS EI
STREAM OPER
-GRID 750
-LEFT -179250
-LOWER 00000
-UPPER 90000
-RIGHT 180000
-LEVELIST 24/to/60
-RESOL 255
+GRID 0.750
+LEFT -24.75
+LOWER 10.5
+UPPER 75.
+RIGHT 60.
+LEVELIST 1/to/137
+RESOL 213
GAUSS 1
FORMAT GRIB2
-ADDPAR /186/187/188/235/139/39
PREFIX EI
ECTRANS 1
-CWC 1
diff --git a/run/control/CONTROL_EI.compare b/run/control/CONTROL_EI.compare
deleted file mode 100644
index 95920c5337702c0268b0868985bd0df8c2c75daa..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EI.compare
+++ /dev/null
@@ -1,21 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN FC FC FC AN FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS EI
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 50/to/60
-RESOL 159
-GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EI
-ECTRANS 1
diff --git a/run/control/CONTROL_EI.global b/run/control/CONTROL_EI.global
index 80e37caf230aaa61da190928c16ba70cdd1888a1..75f700809215bfebab961e16ae0e2d5d17d84a96 100644
--- a/run/control/CONTROL_EI.global
+++ b/run/control/CONTROL_EI.global
@@ -8,16 +8,14 @@ ACCTIME 00/12
ACCMAXSTEP 12
CLASS EI
STREAM OPER
-GRID 750
-LEFT -179250
-LOWER -90000
-UPPER 90000
-RIGHT 180000
-LEVEL 137
+GRID 0.750
+LEFT -179.25
+LOWER -90.
+UPPER 90.
+RIGHT 180.
LEVELIST 1/to/137
RESOL 213
GAUSS 1
FORMAT GRIB2
-ADDPAR /186/187/188/235/139/39
PREFIX EI
ECTRANS 1
diff --git a/run/control/CONTROL_EI.global.public b/run/control/CONTROL_EI.public
similarity index 58%
rename from run/control/CONTROL_EI.global.public
rename to run/control/CONTROL_EI.public
index 57725ad4af9d2217f124f998fb979b9c3968e786..f89c2a9f6569174eee0dd9c8602367cb4c0ee45d 100644
--- a/run/control/CONTROL_EI.global.public
+++ b/run/control/CONTROL_EI.public
@@ -7,17 +7,14 @@ ACCTYPE FC
ACCTIME 00/12
ACCMAXSTEP 12
CLASS EI
-DATASET interim
+DATASET INTERIM
STREAM OPER
-GRID 750
-LEFT -179250
-LOWER -90000
-UPPER 90000
-RIGHT 180000
+GRID 0.750
+LEFT -179.25
+LOWER -90.
+UPPER 90.
+RIGHT 180.
LEVELIST 1/to/60
RESOL 213
GAUSS 1
-FORMAT GRIB1
-ADDPAR 186/187/188/235/139/39
PREFIX EIpub
-ECTRANS 1
diff --git a/run/control/CONTROL_EI.testgrid b/run/control/CONTROL_EI.testgrid
deleted file mode 100644
index 95920c5337702c0268b0868985bd0df8c2c75daa..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_EI.testgrid
+++ /dev/null
@@ -1,21 +0,0 @@
-START_DATE
-DTIME 3
-TYPE AN FC FC FC AN FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS EI
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 50/to/60
-RESOL 159
-GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX EI
-ECTRANS 1
diff --git a/run/control/CONTROL_F90.OD_GAUSS b/run/control/CONTROL_F90.OD_GAUSS
deleted file mode 100644
index 4bbfedc5f1f210a5115079a1d48696cf4435ed72..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_F90.OD_GAUSS
+++ /dev/null
@@ -1,25 +0,0 @@
-START_DATE 20190105
-END_DATE 20190105
-DTIME 6
-TYPE AN FC AN FC
-TIME 00 00 12 12
-STEP 00 06 00 06
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT 10.
-LOWER 40.
-UPPER 50.
-RIGHT 20.
-LEVELIST 127/to/137
-RESOL 159
-GAUSS 1
-FORMAT GRIB1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX OD_GAUSS_
-ECTRANS 1
-CWC 1
-RRINT 1
diff --git a/run/control/CONTROL_F90.OD_STD b/run/control/CONTROL_F90.OD_STD
deleted file mode 100644
index 87f57048820b222b0ffd9cbb46b248568af44039..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_F90.OD_STD
+++ /dev/null
@@ -1,25 +0,0 @@
-START_DATE 20190105
-END_DATE 20190105
-DTIME 6
-TYPE AN FC AN FC
-TIME 00 00 12 12
-STEP 00 06 00 06
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT 10.
-LOWER 40.
-UPPER 50.
-RIGHT 20.
-LEVELIST 127/to/137
-RESOL 159
-ETA 1
-FORMAT GRIB1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX OD_STD_
-ECTRANS 1
-CWC 1
-RRINT 1
diff --git a/run/control/CONTROL_FC.pure.36hours.testgrid b/run/control/CONTROL_FC.pure.36hours.testgrid
deleted file mode 100644
index 7097298938e700ddbd92a8358ccced75df14de9b..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_FC.pure.36hours.testgrid
+++ /dev/null
@@ -1,24 +0,0 @@
-START_DATE 20090108
-DTIME 3
-TYPE FC
-TIME 00
-STEP 00
-MAXSTEP 36
-ACCTYPE FC
-ACCTIME 00
-ACCMAXSTEP 36
-LEVELIST 85/to/91
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-RESOL 159
-ETA 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-CWC 1
-PREFIX FC
-ECTRANS 1
-RRINT 1
\ No newline at end of file
diff --git a/run/control/CONTROL_FC.twiceaday.3hourly.testgrid b/run/control/CONTROL_FC.twiceaday.3hourly.testgrid
deleted file mode 100644
index 27a9b97bdd28846983341c60a3dc95a64da399a4..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_FC.twiceaday.3hourly.testgrid
+++ /dev/null
@@ -1,23 +0,0 @@
-START_DATE
-DTIME 3
-TYPE FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-MAXSTEP 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 09
-LEVELIST 85/to/91
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 10.
-UPPER 20.
-RIGHT 5.
-RESOL 159
-ETA 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-CWC 1
-PREFIX FChd_
-ECTRANS 1
diff --git a/run/control/CONTROL_ZAMG_SYNTH_ELDA b/run/control/CONTROL_OD.ELDA.FC.eta.ens.double
similarity index 100%
rename from run/control/CONTROL_ZAMG_SYNTH_ELDA
rename to run/control/CONTROL_OD.ELDA.FC.eta.ens.double
diff --git a/run/control/CONTROL_CF b/run/control/CONTROL_OD.ENFO.CF
similarity index 100%
rename from run/control/CONTROL_CF
rename to run/control/CONTROL_OD.ENFO.CF
diff --git a/run/control/CONTROL_CV b/run/control/CONTROL_OD.ENFO.CV
similarity index 100%
rename from run/control/CONTROL_CV
rename to run/control/CONTROL_OD.ENFO.CV
diff --git a/run/control/CONTROL_PF.testgrid b/run/control/CONTROL_OD.ENFO.PF
similarity index 55%
rename from run/control/CONTROL_PF.testgrid
rename to run/control/CONTROL_OD.ENFO.PF
index 73a0fdd59a3654534629e2e87b956981a2edf628..effcc6ad9c46bee4cf43f5cc6a2b7b97824437be 100644
--- a/run/control/CONTROL_PF.testgrid
+++ b/run/control/CONTROL_OD.ENFO.PF
@@ -7,14 +7,13 @@ STEP 00
CLASS OD
STREAM ENFO
NUMBER 0/to/9
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 55/to/62
+GRID 1000
+LEFT -179000
+LOWER -90000
+UPPER 90000
+RIGHT 180000
+LEVELIST 1/to/62
RESOL 159
GAUSS 1
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
PREFIX EE
ECTRANS 1
diff --git a/run/control/CONTROL_PF b/run/control/CONTROL_OD.ENFO.PF.36hours
similarity index 100%
rename from run/control/CONTROL_PF
rename to run/control/CONTROL_OD.ENFO.PF.36hours
diff --git a/run/control/CONTROL_OD.ENFO.PF.ens b/run/control/CONTROL_OD.ENFO.PF.ens
new file mode 100644
index 0000000000000000000000000000000000000000..128bb39f90a05f2f9c1e58985f2e735436fdc4c6
--- /dev/null
+++ b/run/control/CONTROL_OD.ENFO.PF.ens
@@ -0,0 +1,18 @@
+START_DATE
+DTIME 3
+TYPE PF PF PF PF PF PF PF PF
+TIME 00 00 00 00 12 12 12 12
+STEP 00 03 06 09 00 03 06 09
+STREAM ENFO
+PREFIX EN
+UPPER 90000
+LOWER -90000
+LEFT -179000
+RIGHT 180000
+CLASS OD
+NUMBER 1/TO/50/BY/1
+GRID 1000
+RESOL 159
+GAUSS 1
+LEVELIST 1/TO/91
+ECTRANS 1
diff --git a/run/control/CONTROL_OPS.4V b/run/control/CONTROL_OD.OPER.4V.operational
similarity index 100%
rename from run/control/CONTROL_OPS.4V
rename to run/control/CONTROL_OD.OPER.4V.operational
diff --git a/run/control/CONTROL_FC.pure.36hours b/run/control/CONTROL_OD.OPER.FC.36hours
similarity index 100%
rename from run/control/CONTROL_FC.pure.36hours
rename to run/control/CONTROL_OD.OPER.FC.36hours
diff --git a/run/control/CONTROL_OD.global.eta b/run/control/CONTROL_OD.OPER.FC.eta.global
similarity index 100%
rename from run/control/CONTROL_OD.global.eta
rename to run/control/CONTROL_OD.OPER.FC.eta.global
diff --git a/run/control/CONTROL_OD.highres.eta b/run/control/CONTROL_OD.OPER.FC.eta.highres
similarity index 100%
rename from run/control/CONTROL_OD.highres.eta
rename to run/control/CONTROL_OD.OPER.FC.eta.highres
diff --git a/run/control/CONTROL_OD.highres.gauss b/run/control/CONTROL_OD.OPER.FC.gauss.highres
similarity index 100%
rename from run/control/CONTROL_OD.highres.gauss
rename to run/control/CONTROL_OD.OPER.FC.gauss.highres
diff --git a/run/control/CONTROL_OPS b/run/control/CONTROL_OD.OPER.FC.operational
similarity index 100%
rename from run/control/CONTROL_OPS
rename to run/control/CONTROL_OD.OPER.FC.operational
diff --git a/run/control/CONTROL_FC.twiceaday.1hourly b/run/control/CONTROL_OD.OPER.FC.twiceaday.1hourly
similarity index 100%
rename from run/control/CONTROL_FC.twiceaday.1hourly
rename to run/control/CONTROL_OD.OPER.FC.twiceaday.1hourly
diff --git a/run/control/CONTROL_FC.twiceaday.3hourly b/run/control/CONTROL_OD.OPER.FC.twiceaday.3hourly
similarity index 100%
rename from run/control/CONTROL_FC.twiceaday.3hourly
rename to run/control/CONTROL_OD.OPER.FC.twiceaday.3hourly
diff --git a/run/control/CONTROL_OD.eta.compare b/run/control/CONTROL_OD.eta.compare
deleted file mode 100644
index 9b68c1fa7504fcf42014b278939626dd0fe05193..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.eta.compare
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12
-STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 130/to/137
-RESOL 159
-ETA 1
-FORMAT GRIB2
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX ENH
-ECTRANS 1
diff --git a/run/control/CONTROL_OD.eta.testgrid b/run/control/CONTROL_OD.eta.testgrid
deleted file mode 100644
index 9b68c1fa7504fcf42014b278939626dd0fe05193..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.eta.testgrid
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12
-STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-LEVELIST 130/to/137
-RESOL 159
-ETA 1
-FORMAT GRIB2
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX ENH
-ECTRANS 1
diff --git a/run/control/CONTROL_OD.fastnet b/run/control/CONTROL_OD.fastnet
deleted file mode 100644
index 6cb5384c312da29370ef4d0d3e7e601fbe6ba52e..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.fastnet
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12
-STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 0.1
-LEFT -10.0
-LOWER 36.0
-UPPER 61.2
-RIGHT 32.0
-LEVEL 137
-RESOL 1279
-ETA 1
-FORMAT GRIB2
-ADDPAR /186/187/188/235/139/39
-PREFIX EN
-ECTRANS 1
diff --git a/run/control/CONTROL_OD.fastnet~ b/run/control/CONTROL_OD.fastnet~
deleted file mode 100644
index 290f0ba6a78eec8b3d569fff24510f17517d94e6..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.fastnet~
+++ /dev/null
@@ -1,19 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12
-STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11
-CLASS OD
-STREAM OPER
-GRID 0.1
-LEFT -10.0
-LOWER 36.0
-UPPER 61.2
-RIGHT 32.0
-LEVEL 137
-RESOL 1279
-ETA 1
-FORMAT GRIB2
-ADDPAR /186/187/188/235/139/39
-PREFIX EN
-ECTRANS 1
diff --git a/run/control/CONTROL_OD.highres.eta.alife b/run/control/CONTROL_OD.highres.eta.alife
deleted file mode 100644
index 9fd2bd330752bd766c6bea47cea1c84e1b4148ad..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.highres.eta.alife
+++ /dev/null
@@ -1,23 +0,0 @@
-START_DATE 20130315
-END_DATE 20130322
-DTIME 3
-TYPE AN FC FC FC AN FC FC FC
-TIME 00 00 00 00 12 12 12 12
-STEP 00 03 06 09 00 03 06 09
-ACCTYPE FC
-ACCTIME 00/12
-ACCMAXSTEP 09
-CLASS OD
-STREAM OPER
-GRID 200
-LEFT -25000
-LOWER 15000
-UPPER 75000
-RIGHT 65000
-LEVELIST 60/to/137
-RESOL 799
-ETA 1
-FORMAT GRIB1
-ADDPAR /186/187/188/235/139/39
-PREFIX alife_20
-ECTRANS 1
diff --git a/run/control/CONTROL_OD.highres.gauss.testgrid b/run/control/CONTROL_OD.highres.gauss.testgrid
deleted file mode 100644
index 32f728a01d56d0b2fc5ff9ac9573eb3588c75de2..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OD.highres.gauss.testgrid
+++ /dev/null
@@ -1,22 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC FC FC FC FC FC FC AN FC FC FC FC FC FC FC FC FC FC FC
-TIME 00 00 00 00 00 00 00 00 00 00 00 00 12 12 12 12 12 12 12 12 12 12 12 12
-STEP 00 01 02 03 04 05 06 07 08 09 10 11 00 01 02 03 04 05 06 07 08 09 10 11
-ACCTIME 00/12
-ACCTYPE FC
-ACCMAXSTEP 12
-CLASS OD
-STREAM OPER
-GRID 0.2
-LEFT -1.
-LOWER 30.
-UPPER 32.
-RIGHT 1.
-LEVELIST 130/to/137
-RESOL 799
-GAUSS 1
-FORMAT GRIB2
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-PREFIX ENHG
-ECTRANS 1
diff --git a/run/control/CONTROL_OPS.4V.testgrid b/run/control/CONTROL_OPS.4V.testgrid
deleted file mode 100644
index 77545278dbfe86a9c51ab4141491036b5cde4508..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_OPS.4V.testgrid
+++ /dev/null
@@ -1,19 +0,0 @@
-START_DATE
-DTIME 1
-TYPE AN FC FC FC FC FC AN FC FC 4V FC FC 4V FC FC FC FC FC AN FC FC 4V FC FC 4V
-TIME 00 00 00 00 00 00 06 00 00 09 00 00 09 12 12 12 12 12 18 12 12 21 12 12 21
-STEP 00 01 02 03 04 05 00 07 08 00 10 11 03 01 02 03 04 05 00 07 08 00 10 11 03
-PREFIX OP
-GRID 1.
-LEFT -5.
-LOWER 30.
-UPPER 40.
-RIGHT 5.
-CLASS OD
-STREAM OPER
-RESOL 159
-GAUSS 1
-LEVELIST 130/to/137
-ADDPAR LCC/MCC/HCC/SKT/STL1/SWVL1
-ECTRANS 1
-ECFSDIR ectmp:/${USER}/ecops
diff --git a/run/control/CONTROL_ZAMG_SYNTH_ENFO b/run/control/CONTROL_ZAMG_SYNTH_ENFO
deleted file mode 100644
index 0668efefd8d7317c2a1de9558b58579ebbcd8806..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_ZAMG_SYNTH_ENFO
+++ /dev/null
@@ -1,31 +0,0 @@
-DAY1
-DAY2
-DTIME 3
-M_TYPE PF PF PF PF PF PF PF PF
-M_TIME 00 00 00 00 12 12 12 12
-M_STEP 00 03 06 09 00 03 06 09
-M_STREAM ENFO
-PREFIX EN
-M_UPPER 90000
-M_LOWER -90000
-M_LEFT -179000
-M_RIGHT 180000
-M_CLASS OD
-M_NUMBER 1/TO/50/BY/1
-M_GRID 1000
-M_RESOL 159
-M_SMOOTH 0
-M_GAUSS 1
-M_ETA 0
-M_ETAPAR 77
-M_DPDETA 1
-M_LEVEL 91
-M_LEVELIST 85/TO/91
-M_ADDPAR 186/187/188/235/139/39/134
-M_FORMAT GRIB1
-ECSTORAGE 1
-ECTRANS 0
-DEBUG 1
-ECFSDIR ectmp:/${USER}/ecops
-MAILOPS ${USER}
-MAILFAIL ${USER}
diff --git a/run/control/CONTROL_ZAMG_SYNTH_ENFOCF b/run/control/CONTROL_ZAMG_SYNTH_ENFOCF
deleted file mode 100644
index 236cce51c3f22bda12a96c32edf19855e3f7cee2..0000000000000000000000000000000000000000
--- a/run/control/CONTROL_ZAMG_SYNTH_ENFOCF
+++ /dev/null
@@ -1,35 +0,0 @@
-DAY1
-DAY2
-DTIME 3
-M_TYPE CF CF CF CF CF CF CF CF
-M_TIME 00 00 00 00 12 12 12 12
-M_STEP 00 03 06 09 00 03 06 09
-ACCTYPE CF
-ACCTIME 00/12
-ACCMAXSTEP 12
-M_STREAM ENFO
-PREFIX EN
-M_UPPER 90000
-M_LOWER -90000
-M_LEFT -179000
-M_RIGHT 180000
-M_CLASS OD
-M_NUMBER 0
-M_GRID 1000
-M_RESOL 159
-M_SMOOTH 0
-M_GAUSS 1
-M_ETA 0
-M_ETAPAR 77
-M_DPDETA 1
-M_CWC 1
-M_LEVEL 91
-M_LEVELIST 1/TO/91
-M_ADDPAR 186/187/188/235/139/39/134
-M_FORMAT GRIB1
-ECSTORAGE 0
-ECTRANS 1
-DEBUG 1
-ECFSDIR ectmp:/${USER}/ecops
-MAILOPS ${USER}
-MAILFAIL ${USER}