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Commit feed4e7b authored by Aiko Voigt's avatar Aiko Voigt
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Adds python kernel for srvx1 and first era5 download script

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*/.ipynb_checkpoints/
# call with:
# /srvfs/home/avoigt/micromamba/envs/intro-comp-meteo-ex-w2024/bin/python3.10 era5-download.py
import xarray as xr
import cdsapi
import cdsapi
dataset = "reanalysis-era5-single-levels"
request = {
"product_type": ["reanalysis"],
"variable": [
"10m_u_component_of_wind",
"10m_v_component_of_wind",
"2m_temperature",
"surface_solar_radiation_downward_clear_sky",
"surface_solar_radiation_downwards"
],
"year": ["1950"],
"month": ["01"],
"day": [
"01", "02", "03",
"04", "05", "06",
"07", "08", "09",
"10", "11", "12",
"13", "14", "15",
"16", "17", "18",
"19", "20", "21",
"22", "23", "24",
"25", "26", "27",
"28", "29", "30",
"31"
],
"time": [
"00:00", "01:00", "02:00",
"03:00", "04:00", "05:00",
"06:00", "07:00", "08:00",
"09:00", "10:00", "11:00",
"12:00", "13:00", "14:00",
"15:00", "16:00", "17:00",
"18:00", "19:00", "20:00",
"21:00", "22:00", "23:00"
],
"data_format": "netcdf",
"download_format": "unarchived"
}
client = cdsapi.Client()
client.retrieve(dataset, request).download("/srvfs/scratch/avoigt/msc-intro-computational-meteorology-exercises-w2024/era5-1950-01.nc")
\ No newline at end of file
# note:
# 1. cdsapi requires cgi, which was removed from python in python3.11; I am therefore specifying a lower python version
# 2. I also found that I need to use numpy1 and not the new numpy2, which came out in summer 2024
# move to SRV home directory
cd /srvfs/home/avoigt
KNAME="intro-comp-meteo-ex-w2024" # name of pyhton kernel
KNAME="intro-comp-meteo-ex-w2024" # name of python kernel
ROOTPREFIX="/srvfs/home/avoigt/micromamba"
module load micromamba
micromamba create -n $KNAME -r $ROOTPREFIX
micromamba install -c conda-forge -n $KNAME -r $ROOTPREFIX xarray \ pandas \ numpy \ matplotlib \ cartopy \ netcdf4
micromamba install -c conda-forge -n $KNAME -r $ROOTPREFIX dask \ zarr
micromamba install -c conda-forge -n $KNAME -r $ROOTPREFIX cdsapi
micromamba install -c conda-forge -n $KNAME -r $ROOTPREFIX python=3.10 \ pandas \ numpy=1.26.4 \ matplotlib \ cartopy \ netcdf4 \ xarray \ dask \ zarr \ cdsapi \ ipykernel
# create Jupyter kernel and make available
micromamba install -c conda-forge -n $KNAME -r $ROOTPREFIX ipykernel
${ROOTPREFIX}/envs/${KNAME}/bin/python3 -m ipykernel install --user --name=$KNAME
# export evironment setup to env.txt
# export environment setup to env.txt
micromamba env export -p ${ROOTPREFIX}/envs/${KNAME}/ > env.txt
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