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IMGW
Singularity
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6a0d392e
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6a0d392e
authored
4 years ago
by
Marty Kandes
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README
naked-singularity
DESCRIPTION
A repository of definition for building Singularity* containers
around the software applications, frameworks, and libraries you need
to run on high-performance computing systems.
* https://sylabs.io/guides/latest/user-guide
USAGE
1. Install Singularity on your Linux desktop, laptop, or virtual
machine.
./naked-singularity.sh install
2. Build a simple base Ubuntu Singularity container.
sudo singularity build ubuntu.sif definition-files/ubuntu/Singularity.ubuntu-18.04
A number of pre-built containers from this repository are also
now hosted at both Singularity Hub
singularity pull shub://mkandes/naked-singularity:ubuntu-18.04
and Sylabs' Container Library
singularity pull library://mkandes/naked-singularity:ubuntu-18.04
3. Uninstall Singularity from your Linux desktop, laptop, or
virtual machine.
./naked-singularity.sh uninstall
STATUS
This repository is currently undergoing a major restructuring.
Significant changes over the next few weeks should be expected.
CONTRIBUTE
If you would like to contribute one of your own Singularity
container definition files for a specific application OR request
a modification to an existing container definition, then please
submit a pull request.
AUTHOR
Marty Kandes, Ph.D.
Computational & Data Science Research Specialist
High-Performance Computing User Services Group
San Diego Supercomputer Center
University of California, San Diego
VERSION
1.0.1
LAST UPDATED
Saturday, December 26th, 2020
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# naked-singularity
A repository of definition for building
[
Singularity
](
https://sylabs.io/guides/latest/user-guide
)
containers
around the software applications, frameworks, and libraries you need to
run on high-performance computing systems.
## Install Singularity
Install Singularity on your Linux desktop, laptop, or virtual machine.
```
bash
./naked-singularity.sh
install
```
## Build a Singularity container from a definition file
Build an Ubuntu Singularity container from one of the definition files
available in this repository.
```
bash
sudo
singularity build ubuntu.sif definition-files/ubuntu/Singularity.ubuntu-18.04
```
## Download an existing Singularity container
A number of pre-built containers from this repository are also now
hosted at Singularity Hub.
```
bash
singularity pull shub://mkandes/naked-singularity:ubuntu-18.04
```
## Status
The naked-singularity project is currently undergoing a major
restructuring of the repository. Significant changes over the next few
weeks should be expected.
## Contribute
If you would like to contribute one of your own Singularity container
definition files for a specific application OR request a modification to
an existing container definition, then please submit a pull request.
## Author
Marty Kandes, Ph.D.
Computational & Data Science Research Specialist
High-Performance Computing User Services Group
San Diego Supercomputer Center
University of California, San Diego
## Version
1.
1.0
## Last Updated
Sunday, December 27th, 2020
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