capitalize all directory names and adapt pathes in files

...tion/html/_sources/Documentation/Input/compilejob.rst.txt

...ntation/html/_sources/Documentation/Input/control.rst.txt

.../html/_sources/Documentation/Input/control_params.rst.txt

...ation/html/_sources/Documentation/Input/ecmwf_env.rst.txt

...tation/html/_sources/Documentation/Input/examples.rst.txt

...tml/_sources/Documentation/Input/fortran_makefile.rst.txt

...ation/html/_sources/Documentation/Input/jobscript.rst.txt

Documentation/html/_sources/Documentation/Input/run.rst.txt

...mentation/html/_sources/Documentation/Input/setup.rst.txt

...ation/html/_sources/Documentation/Input/templates.rst.txt

...on/html/_sources/Documentation/Overview/app_modes.rst.txt

...tion/html/_sources/Documentation/Overview/convert.rst.txt

...on/html/_sources/Documentation/Overview/prog_flow.rst.txt

Documentation/html/_sources/Documentation/api.rst.txt

Documentation/html/_sources/Documentation/disagg.rst.txt

Documentation/html/_sources/Documentation/input.rst.txt

Documentation/html/_sources/Documentation/output.rst.txt

Documentation/html/_sources/Documentation/overview.rst.txt

Documentation/html/_sources/Documentation/vertco.rst.txt

Documentation/html/_sources/Ecmwf/access.rst.txt