Merge branch '404-integrate-the-helm-chart-into-this-repository' into 'dev'

Resolve "Integrate the Helm chart into this repository"

See merge request !230

helm-charts/dbrepo/templates/storage-service/job.yaml

+apiVersion: batch/v1
+kind: Job
+metadata:
+  name: storage-service-create-buckets-job
+  namespace: {{ .Values.namespace }}
+spec:
+  template:
+    metadata:
+      name: storage-service-create-buckets-job
+    spec:
+      restartPolicy: OnFailure
+      containers:
+        - name: init
+          image: s210.dl.hpc.tuwien.ac.at/dbrepo/storage-service-init:latest
+          env:
+            - name: WEED_CLUSTER_DEFAULT
+              value: "sw"
+            - name: WEED_CLUSTER_SW_MASTER
+              value: "storage-service-master.{{ .Release.Name }}:9333"
+            - name: SEAWEEDFS_ENDPOINT
+              value: "storage-service-master.{{ .Release.Name }}:9333"
+            - name: WEED_CLUSTER_SW_FILER
+              value: "storage-service-filer-client.{{ .Release.Name }}:8888"
+            - name: POD_IP
+              valueFrom:
+                fieldRef:
+                  fieldPath: status.podIP
+            - name: POD_NAME
+              valueFrom:
+                fieldRef:
+                  fieldPath: metadata.name
+            - name: NAMESPACE
+              valueFrom:
+                fieldRef:
+                  fieldPath: metadata.namespace
+            - name: SEAWEEDFS_FULLNAME
+              value: "storage-service"
+          volumeMounts:
+            - name: config-users
+              mountPath: /etc/sw
+              readOnly: true
+          ports:
+            - containerPort: 9333
+              name: swfs-master
+            - containerPort: 19333
+              #name: swfs-master-grpc
+      volumes:
+        - name: config-users
+          secret:
+            defaultMode: 420
+            secretName: seaweedfs-s3-secret

helm-charts/dbrepo/templates/storage-service/secret.yaml

+apiVersion: v1
+kind: Secret
+metadata:
+  name: seaweedfs-s3-secret
+  namespace: {{ .Values.namespace }}
+  labels:
+    app.kubernetes.io/name: seaweedfs
+    app.kubernetes.io/component: s3
+stringData:
+  seaweedfs_s3_config: |
+    {
+      "identities": [
+        {
+          "name": "admin",
+          "credentials": [
+            {
+              "accessKey": "{{ index .Values "storage-service" "s3" "auth" "username" }}",
+              "secretKey": "{{ index .Values "storage-service" "s3" "auth" "password" }}"
+            }
+          ],
+          "actions": [
+            "Read",
+            "Write",
+            "List",
+            "Tagging",
+            "Admin"
+          ]
+        }
+      ]
+    }
+

helm-charts/dbrepo/templates/ui/configmap.yaml

+{{- if .Values.ui.enabled }}
+---
+apiVersion: v1
+kind: ConfigMap
+metadata:
+  name: ui-setup
+  namespace: {{ $.Values.namespace }}
+data:
+  dbrepo.config.json: |
+    {
+      "title": "{{ .Values.ui.title }}",
+      "version": "{{ .Values.ui.version }}",
+      "ssl": {
+        "force": "{{ .Values.ui.forceSsl }}"
+      },
+      "logo": {
+        "path": "{{ .Values.ui.logo }}"
+      },
+      "icon": {
+        "path": "{{ .Values.ui.icon }}"
+      },
+      "appleTouchIcon": {
+        "path": "{{ .Values.ui.appleTouchIcon }}"
+      },
+      "api": {
+        "useSsl": "{{ .Values.ui.forceSsl }}"
+      },
+      "broker": {
+        "connection": {
+          "host": "{{ .Values.ui.broker.host }}",
+          "ports": {{ .Values.ui.broker.ports | toJson }},
+          "extraInfo": "{{ .Values.ui.broker.extraInfo}}"
+        }
+      },
+      "storage": {
+        "endpoint": "storage-service",
+        "port": 9000,
+        "useSsl": false,
+        "accessKey": {
+          "id": "seaweedfsadmin",
+          "secret": "seaweedfsadmin"
+        }
+      },
+      "database": {
+        "connection": {
+          "extraInfo": "128.130.0.0/15"
+        }
+      },
+      "keycloak": {
+        "client": {
+          "id": "dbrepo-client",
+          "secret": "MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG"
+        }
+      },
+      "opensearch": {
+        "username": "admin",
+        "password": "admin"
+      },
+      "pid": {
+        "default": {
+          "publisher": "TU Wien"
+        }
+      },
+      "doi": {
+        "url": "{{ .Values.ui.datacite.url }}"
+      },
+      "pages": {
+        "login": {
+          "links": [
+            {
+              "text": "OpenSearch Admin",
+              "blank": true,
+              "href": "{{ printf "https://%s/admin/dashboard" .Values.hostname }}"
+            },
+            {
+              "text": "RabbitMQ Admin",
+              "blank": true,
+              "href": "{{ printf "https://%s/admin/broker/" .Values.hostname }}"
+            },
+            {
+              "text": "Keycloak Admin",
+              "blank": true,
+              "href": "{{ printf "https://%s/api/auth/" .Values.hostname }}"
+            }
+          ]
+        },
+        "information": {
+          "links": [
+            {
+              "text": "Online Documentation",
+              "blank": true,
+              "href": "https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/latest/"
+            },
+            {
+              "text": "Sourcecode Documentation",
+              "blank": true,
+              "href": "https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services"
+            },
+            {
+              "text": "Docker Images",
+              "blank": true,
+              "href": "https://hub.docker.com/u/dbrepo"
+            },
+            {
+              "text": "Demo Instance (Kubernetes)",
+              "blank": true,
+              "href": "https://test.dbrepo.tuwien.ac.at/"
+            },
+            {
+              "text": "Demo Instance (Docker Compose)",
+              "blank": true,
+              "href": "https://dbrepo2.ec.tuwien.ac.at/"
+            },
+            {
+              "text": "Paper",
+              "blank": true,
+              "href": "https://doi.org/10.2218/ijdc.v17i1.825"
+            }
+          ]
+        }
+      }
+    }
+{{- end }}
\ No newline at end of file

helm-charts/dbrepo/templates/ui/deployment.yaml

+{{- if .Values.ui.enabled }}
+---
+apiVersion: apps/v1
+kind: Deployment
+metadata:
+  name: ui
+  namespace: {{ $.Values.namespace }}
+  labels:
+    app: ui
+    service: ui
+spec:
+  replicas: {{ .Values.ui.replicaCount }}
+  strategy:
+    type: {{ $.Values.strategyType }}
+  selector:
+    matchLabels:
+      app: ui
+      service: ui
+  template:
+    metadata:
+      labels:
+        app: ui
+        service: ui
+    spec:
+      securityContext:
+        fsGroup: 1000
+        runAsUser: 1000
+        runAsGroup: 1000
+      containers:
+        - name: ui
+          image: {{ printf "%s/%s:%s" .Values.ui.image.registry .Values.ui.image.repository .Values.ui.image.tag }}
+          imagePullPolicy: {{ .Values.ui.image.pullPolicy | default "IfNotPresent" }}
+          ports:
+            - containerPort: 3000
+              protocol: TCP
+          env:
+            - name: API
+              value: "https://{{ .Values.hostname }}"
+          volumeMounts:
+            - mountPath: /app/dbrepo.config.json
+              subPath: dbrepo.config.json
+              name: config
+            {{- if .Values.ui.extraVolumeMounts }}
+            {{- .Values.ui.extraVolumeMounts | toYaml | nindent 12 }}
+            {{- end }}
+          livenessProbe:
+            httpGet:
+              path: /
+              port: 3000
+            initialDelaySeconds: 120
+            periodSeconds: 30
+          readinessProbe:
+            httpGet:
+              path: /
+              port: 3000
+            initialDelaySeconds: 30
+            periodSeconds: 30
+      volumes:
+        - name: config
+          configMap:
+            name: ui-setup
+        {{- if .Values.ui.extraVolumes }}
+        {{- .Values.ui.extraVolumes | toYaml | nindent 8 }}
+        {{- end }}
+{{- end }}

helm-charts/dbrepo/templates/ui/service.yaml

+{{- if .Values.ui.enabled }}
+---
+apiVersion: v1
+kind: Service
+metadata:
+  name: ui
+  namespace: {{ $.Values.namespace }}
+  labels:
+    service: ui
+spec:
+  type: ClusterIP
+  ports:
+    - name: "nuxt"
+      port: 80
+      targetPort: 3000
+      protocol: TCP
+  selector:
+    service: ui
+{{- end }}

helm-charts/dbrepo/templates/upload-service/deployment.yaml

+{{- if .Values.uploadService.enabled }}
+---
+apiVersion: apps/v1
+kind: Deployment
+metadata:
+  name: upload-service
+  namespace: {{ $.Values.namespace }}
+  labels:
+    app: upload-service
+    service: upload-service
+spec:
+  replicas: {{ .Values.uploadService.replicaCount }}
+  strategy:
+    type: {{ $.Values.strategyType }}
+  selector:
+    matchLabels:
+      app: upload-service
+      service: upload-service
+  template:
+    metadata:
+      labels:
+        app: upload-service
+        service: upload-service
+    spec:
+      securityContext:
+        fsGroup: 1000
+        runAsUser: 1000
+        runAsGroup: 1000
+      containers:
+        - name: upload-service
+          image: {{ printf "%s/%s:%s" .Values.uploadService.image.registry .Values.uploadService.image.repository .Values.uploadService.image.tag }}
+          imagePullPolicy: {{ .Values.uploadService.image.pullPolicy | default "IfNotPresent" }}
+          env:
+            - name: AWS_ACCESS_KEY_ID
+              valueFrom:
+                secretKeyRef:
+                  name: upload-service-secret
+                  key: aws-access-key-id
+            - name: AWS_SECRET_ACCESS_KEY
+              valueFrom:
+                secretKeyRef:
+                  name: upload-service-secret
+                  key: aws-secret-access-key
+            - name: AWS_REGION
+              valueFrom:
+                secretKeyRef:
+                  name: upload-service-secret
+                  key: aws-region
+          args:
+            - "--base-path=/api/upload/files/"
+            - "-s3-endpoint=http://storage-service-s3:9000"
+            - "-s3-bucket=dbrepo-upload"
+          ports:
+            - containerPort: 1080
+              protocol: TCP
+          livenessProbe:
+            httpGet:
+              port: 1080
+          readinessProbe:
+            httpGet:
+              port: 1080
+            initialDelaySeconds: 10
+            periodSeconds: 30
+{{- end }}

helm-charts/dbrepo/templates/upload-service/secret.yaml

+{{- if .Values.uploadService.enabled }}
+---
+apiVersion: v1
+kind: Secret
+metadata:
+  name: upload-service-secret
+  namespace: {{ .Values.namespace }}
+stringData:
+  aws-access-key-id: "{{ index .Values "storage-service" "s3" "auth" "username" }}"
+  aws-secret-access-key: "{{ index .Values "storage-service" "s3" "auth" "password" }}"
+  aws-region: "default"
+{{- end }}
\ No newline at end of file

helm-charts/dbrepo/templates/upload-service/service.yaml

+{{- if .Values.uploadService.enabled }}
+---
+apiVersion: v1
+kind: Service
+metadata:
+  name: upload-service
+  namespace: {{ $.Values.namespace }}
+  labels:
+    service: upload-service
+spec:
+  type: ClusterIP
+  ports:
+    - name: "http"
+      port: 80
+      targetPort: 1080
+      protocol: TCP
+  selector:
+    service: upload-service
+{{- end }}