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FAIR Data Austria DB Repository
DBRepo
Commits
eae7c6db
Verified
Commit
eae7c6db
authored
4 months ago
by
Martin Weise
Browse files
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Updated the data script
Signed-off-by:
Martin Weise
<
martin.weise@tuwien.ac.at
>
parent
61382bb6
No related branches found
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Changes
1
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1 changed file
dbrepo-metadata-db/migration/16/data.py
+40
-40
40 additions, 40 deletions
dbrepo-metadata-db/migration/16/data.py
with
40 additions
and
40 deletions
dbrepo-metadata-db/migration/16/data.py
+
40
−
40
View file @
eae7c6db
...
...
@@ -18,8 +18,8 @@ def update_concepts() -> None:
for
concept
in
client
.
get_concepts
():
old_id
:
int
=
concept
.
id
new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_columns_concepts SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_concepts SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_concepts SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_concepts SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
...
...
@@ -36,8 +36,8 @@ def update_units() -> None:
for
unit
in
client
.
get_units
():
old_id
:
int
=
unit
.
id
new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_columns_units SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_units SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_units SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_units SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
...
...
@@ -47,10 +47,10 @@ def update_images() -> None:
for
image
in
client
.
get_images
():
old_id
:
int
=
image
.
id
new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_images SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_image_operators SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_image_types SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_containers SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_images SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_image_operators SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_image_types SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_containers SET id = UUID(), image_id =
'
{
new_id
}
'
WHERE image_id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
...
...
@@ -60,8 +60,8 @@ def update_containers() -> None:
for
containers
in
client
.
get_containers
():
old_id
:
int
=
containers
.
id
new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_containers SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_databases SET cid =
'
{
new_id
}
'
WHERE cid =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_containers SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_databases SET cid =
'
{
new_id
}
'
WHERE cid =
'
{
old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
...
...
@@ -72,30 +72,30 @@ def update_databases() -> None:
database
=
client
.
get_database
(
database_id
=
_database
.
id
)
old_id
:
int
=
database
.
id
new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_tables SET tDBID =
'
{
new_id
}
'
WHERE tDBID =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_have_access SET database_id =
'
{
new_id
}
'
WHERE database_id =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_view SET vdbid =
'
{
new_id
}
'
WHERE vdbid =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifiers SET dbid =
'
{
new_id
}
'
WHERE dbid =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_access SET aDBID =
'
{
new_id
}
'
WHERE aDBID =
{
old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_tables SET tDBID =
'
{
new_id
}
'
WHERE tDBID =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_have_access SET database_id =
'
{
new_id
}
'
WHERE database_id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_view SET vdbid =
'
{
new_id
}
'
WHERE vdbid =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifiers SET dbid =
'
{
new_id
}
'
WHERE dbid =
'
{
old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_access SET aDBID =
'
{
new_id
}
'
WHERE aDBID =
'
{
old_id
}
'
;
"
)
for
view
in
database
.
views
:
v_old_id
:
int
=
view
.
id
v_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_identifiers SET vid =
'
{
v_new_id
}
'
WHERE vid =
{
v_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_view_columns SET id = UUID(), view_id =
'
{
v_new_id
}
'
WHERE id =
{
v_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifiers SET vid =
'
{
v_new_id
}
'
WHERE vid =
'
{
v_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_view_columns SET id = UUID(), view_id =
'
{
v_new_id
}
'
WHERE id =
'
{
v_old_id
}
'
;
"
)
for
table
in
database
.
tables
:
tbl_old_id
:
int
=
table
.
id
tbl_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_identifiers SET tid =
'
{
tbl_new_id
}
'
WHERE tid =
{
tbl_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifiers SET tid =
'
{
tbl_new_id
}
'
WHERE tid =
'
{
tbl_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_checks SET id = UUID(), tid =
'
{
tbl_new_id
}
'
WHERE tid =
{
tbl_old_id
}
;
"
)
f
"
UPDATE mdb_constraints_checks SET id = UUID(), tid =
'
{
tbl_new_id
}
'
WHERE tid =
'
{
tbl_old_id
}
'
;
"
)
for
fk
in
table
.
constraints
.
foreign_keys
:
fk_old_id
:
int
=
fk
.
id
fk_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_constraints_foreign_key SET id =
'
{
fk_new_id
}
'
, tid =
'
{
tbl_new_id
}
'
WHERE id =
{
fk_old_id
}
;
"
)
f
"
UPDATE mdb_constraints_foreign_key SET id =
'
{
fk_new_id
}
'
, tid =
'
{
tbl_new_id
}
'
WHERE id =
'
{
fk_old_id
}
'
;
"
)
for
fkref
in
fk
.
references
:
plan
.
append
(
f
"
UPDATE mdb_constraints_foreign_key_reference SET id = UUID(), fkid =
'
{
fk_new_id
}
'
WHERE fkid =
{
fkref
}
;
"
)
f
"
UPDATE mdb_constraints_foreign_key_reference SET id = UUID(), fkid =
'
{
fk_new_id
}
'
WHERE fkid =
'
{
fkref
}
'
;
"
)
for
pk
in
table
.
constraints
.
primary_key
:
pk_old_id
:
int
=
pk
.
id
plan
.
append
(
...
...
@@ -104,25 +104,25 @@ def update_databases() -> None:
uk_old_id
:
int
=
uk
.
id
uk_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_constraints_unique SET uid =
'
{
uk_new_id
}
'
, tid =
'
{
tbl_new_id
}
'
WHERE uid =
{
uk_old_id
}
;
"
)
f
"
UPDATE mdb_constraints_unique SET uid =
'
{
uk_new_id
}
'
, tid =
'
{
tbl_new_id
}
'
WHERE uid =
'
{
uk_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_unique_columns SET id = UUID(), uid =
'
{
uk_new_id
}
'
WHERE uid =
{
uk_old_id
}
;
"
)
f
"
UPDATE mdb_constraints_unique_columns SET id = UUID(), uid =
'
{
uk_new_id
}
'
WHERE uid =
'
{
uk_old_id
}
'
;
"
)
for
column
in
table
.
columns
:
col_old_id
:
int
=
column
.
id
col_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_columns SET ID =
'
{
col_new_id
}
'
WHERE ID =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_unique_columns SET cid =
'
{
col_new_id
}
'
WHERE cid =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_primary_key SET cid =
'
{
col_new_id
}
'
WHERE cid =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns SET ID =
'
{
col_new_id
}
'
WHERE ID =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_unique_columns SET cid =
'
{
col_new_id
}
'
WHERE cid =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_primary_key SET cid =
'
{
col_new_id
}
'
WHERE cid =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_foreign_key_reference SET cid =
'
{
col_new_id
}
'
WHERE cid =
{
col_old_id
}
;
"
)
f
"
UPDATE mdb_constraints_foreign_key_reference SET cid =
'
{
col_new_id
}
'
WHERE cid =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_constraints_foreign_key_reference SET rcid =
'
{
col_new_id
}
'
WHERE rcid =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_concepts SET cID =
'
{
col_new_id
}
'
WHERE cID =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_units SET cID =
'
{
col_new_id
}
'
WHERE cID =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_sets SET column_id =
'
{
col_new_id
}
'
WHERE column_id =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_enums SET column_id =
'
{
col_new_id
}
'
WHERE column_id =
{
col_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_tables SET ID =
'
{
tbl_new_id
}
'
WHERE ID =
{
tbl_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_databases SET id =
'
{
new_id
}
'
WHERE id =
{
old_id
}
;
"
)
f
"
UPDATE mdb_constraints_foreign_key_reference SET rcid =
'
{
col_new_id
}
'
WHERE rcid =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_concepts SET cID =
'
{
col_new_id
}
'
WHERE cID =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_units SET cID =
'
{
col_new_id
}
'
WHERE cID =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_sets SET column_id =
'
{
col_new_id
}
'
WHERE column_id =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_columns_enums SET column_id =
'
{
col_new_id
}
'
WHERE column_id =
'
{
col_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_tables SET ID =
'
{
tbl_new_id
}
'
WHERE ID =
'
{
tbl_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_databases SET id =
'
{
new_id
}
'
WHERE id =
'
{
old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
...
...
@@ -139,12 +139,12 @@ def update_identifiers() -> None:
for
identified
in
client
.
get_identifiers
():
i_old_id
:
int
=
identified
.
id
i_new_id
:
uuid
=
uuid
.
uuid4
()
plan
.
append
(
f
"
UPDATE mdb_identifiers SET ID =
'
{
i_new_id
}
'
WHERE id =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_creators SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_descriptions SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_titles SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_funders SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_licenses SET pid =
'
{
i_new_id
}
'
WHERE pid =
{
i_old_id
}
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifiers SET ID =
'
{
i_new_id
}
'
WHERE id =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_creators SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_descriptions SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_titles SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_funders SET id = UUID(), pid =
'
{
i_new_id
}
'
WHERE pid =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
f
"
UPDATE mdb_identifier_licenses SET pid =
'
{
i_new_id
}
'
WHERE pid =
'
{
i_old_id
}
'
;
"
)
plan
.
append
(
"
COMMIT;
"
)
def
finish_schema
()
->
None
:
...
...
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Martin Weise <martin.weise@tuwien.ac.at>Martin Weise <martin.weise@tuwien.ac.at>