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Verified Commit 91b5dce7 authored by Martin Weise's avatar Martin Weise
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Updated the EOL 


Signed-off-by: Martin Weise's avatarMartin Weise <martin.weise@tuwien.ac.at>
parent d23c2866
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.docker/.env deleted 100644 → 0
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MARIADB_VERSION=11.3.2
POSTGRES_VERSION=17.0.0
KEYCLOAK_VERSION=26.0.4
RABBITMQ_VERSION=3.13.7
OPENSEARCH_VERSION=2.10.0
NGINX_VERSION=1.27.3-alpine3.20-slim
OPENLDAP_VERSION=2.6.8
SEAWEEDFS_VERSION=3.71.0
PROMETHEUS_VERSION=2.54.1
\ No newline at end of file
.docker/docker-compose.yml deleted 100644 → 0
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x-resources-nano: &resources-nano
resources:
reservations:
cpus: '0.1'
memory: 128M
limits:
cpus: '0.15'
memory: 192M
x-resources-micro: &resources-micro
resources:
reservations:
cpus: '0.25'
memory: 256M
limits:
cpus: '0.375'
memory: 384M
x-resources-nano-hm: &resources-micro-hm
resources:
reservations:
cpus: '0.25'
memory: 256M
limits:
cpus: '0.375'
memory: 4096M
x-resources-small: &resources-small
resources:
reservations:
cpus: '0.5'
memory: 512M
limits:
cpus: '0.75'
memory: 768M
x-resources-medium: &resources-medium
resources:
reservations:
cpus: '0.5'
memory: 1024M
limits:
cpus: '0.75'
memory: 1536M
x-resources-large: &resources-large
resources:
reservations:
cpus: '1'
memory: 2048M
limits:
cpus: '1.5'
memory: 3072M
x-healthcheck-params: &healthcheck-params
interval: 30s
timeout: 10s
retries: 15
volumes:
metadata-db-data:
data-db-data:
auth-db-data:
broker-service-data:
search-db-data:
identity-service-data:
metric-db-data:
dashboard-ui-data:
services:
dbrepo-metadata-db:
restart: "no"
container_name: dbrepo-metadata-db
hostname: metadata-db
image: docker.io/bitnami/mariadb:${MARIADB_VERSION}
volumes:
- metadata-db-data:/var/lib/mysql
- ./config/1_setup-schema.sql:/docker-entrypoint-initdb.d/1_setup-schema.sql
- ./config/2_setup-data.sql:/docker-entrypoint-initdb.d/2_setup-data.sql
ports:
- "3306:3306"
environment:
MARIADB_DATABASE: "${METADATA_DB:-dbrepo}"
MARIADB_EXTRA_FLAGS: "${METADATA_DB_EXTRA_FLAGS:---max_connections=155 --max-statement-time=60}"
MARIADB_ROOT_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
healthcheck:
test: /opt/bitnami/scripts/mariadb/healthcheck.sh --connect --innodb_initialized
<<: *healthcheck-params
deploy:
<<: *resources-micro-hm
platform: linux/amd64
logging:
driver: json-file
dbrepo-data-db:
restart: "no"
container_name: dbrepo-data-db
hostname: data-db
image: docker.io/bitnami/mariadb:${MARIADB_VERSION}
volumes:
- data-db-data:/var/lib/mysql
- ./config/1_grant-user.sql:/docker-entrypoint-initdb.d/1_grant-user.sql
ports:
- "3307:3306"
environment:
MARIADB_EXTRA_FLAGS: "${DATA_DB_EXTRA_FLAGS:---max_connections=155 --max-statement-time=60}"
MARIADB_PASSWORD: "${READONLY_PASSWORD:-readonly}"
MARIADB_ROOT_PASSWORD: "${DATA_DB_PASSWORD:-dbrepo}"
MARIADB_USER: "${READONLY_USERNAME:-readonly}"
healthcheck:
test: /opt/bitnami/scripts/mariadb/healthcheck.sh --connect --innodb_initialized
<<: *healthcheck-params
deploy:
<<: *resources-micro-hm
platform: linux/amd64
logging:
driver: json-file
dbrepo-auth-db:
restart: "no"
container_name: dbrepo-auth-db
hostname: auth-db
image: docker.io/bitnami/postgresql:${POSTGRES_VERSION}
volumes:
- auth-db-data:/bitnami/postgresql
environment:
POSTGRESQL_DATABASE: "${AUTH_DB_NAME:-keycloak}"
POSTGRESQL_USERNAME: "${AUTH_DB_USERNAME:-keycloak}"
POSTGRESQL_PASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
PGPASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
healthcheck:
test: "psql -U ${AUTH_DB_USERNAME:-keycloak} -h 127.0.0.1 -p 5432 -d ${AUTH_DB_NAME:-keycloak} -c 'select version();'"
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
logging:
driver: json-file
dbrepo-auth-service:
restart: "no"
container_name: dbrepo-auth-service
hostname: auth-service
image: docker.io/bitnami/keycloak:${KEYCLOAK_VERSION}
volumes:
- ./config/import-realms.sh:/docker-entrypoint-initdb.d/import-realms.sh
- ./config/master-realm.json:/opt/keycloak/data/import/master-realm.json
- ./config/dbrepo-realm.json:/opt/keycloak/data/import/dbrepo-realm.json
- ./config/create-event-listener.jar:/opt/bitnami/keycloak/providers/create-event-listener.jar
ports:
- "8080:8080"
environment:
LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
LDAP_ADMIN_DN: "${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at}"
LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
KEYCLOAK_ENABLE_HEALTH_ENDPOINTS: "true"
KEYCLOAK_ENABLE_HTTPS: "false"
KEYCLOAK_ENABLE_STATISTICS: "true"
KEYCLOAK_DATABASE_HOST: "auth-db"
KEYCLOAK_DATABASE_NAME: "${AUTH_DB_NAME:-keycloak}"
KEYCLOAK_DATABASE_USER: "${AUTH_DB_USERNAME:-keycloak}"
KEYCLOAK_DATABASE_PASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
KEYCLOAK_HOSTNAME: "${BASE_URL:-http://localhost}"
KEYCLOAK_HOSTNAME_ADMIN: "http://localhost:8080"
METADATA_SERVICE_ENDPOINT: "${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}"
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -fsS localhost:8080/realms/master
<<: *healthcheck-params
deploy:
<<: *resources-medium
platform: linux/amd64
depends_on:
dbrepo-identity-service:
condition: service_healthy
dbrepo-auth-db:
condition: service_healthy
logging:
driver: json-file
dbrepo-auth-service-init:
init: true
restart: "no"
container_name: dbrepo-auth-service-init
image: registry.datalab.tuwien.ac.at/dbrepo/auth-service-init:1.8.1
environment:
AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
METADATA_DB: "${METADATA_DB:-dbrepo}"
METADATA_DB_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
METADATA_USERNAME: "root"
READONLY_USERNAME: "${READONLY_USERNAME:-readonly}"
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: ${SYSTEM_PASSWORD:-admin}
deploy:
<<: *resources-nano
platform: linux/amd64
depends_on:
dbrepo-auth-service:
condition: service_healthy
dbrepo-gateway-service:
condition: service_healthy
dbrepo-metadata-db:
condition: service_healthy
logging:
driver: json-file
dbrepo-metadata-service:
restart: "no"
container_name: dbrepo-metadata-service
hostname: metadata-service
image: registry.datalab.tuwien.ac.at/dbrepo/metadata-service:1.8.1
environment:
ADMIN_EMAIL: "${ADMIN_EMAIL:-noreply@localhost}"
ANALYSE_SERVICE_ENDPOINT: "${ANALYSE_SERVICE_ENDPOINT:-http://analyse-service:8080}"
AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT_SECRET:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
BASE_URL: "${BASE_URL:-http://localhost}"
BROKER_EXCHANGE_NAME: ${BROKER_EXCHANGE_NAME:-dbrepo}
BROKER_QUEUE_NAME: ${BROKER_QUEUE_NAME:-dbrepo}
BROKER_HOST: "${BROKER_ENDPOINT:-broker-service}"
BROKER_PASSWORD: ${SYSTEM_PASSWORD:-admin}
BROKER_PORT: ${BROKER_PORT:-5672}
BROKER_SERVICE_ENDPOINT: ${BROKER_SERVICE_ENDPOINT:-http://broker-service:15672}
BROKER_USERNAME: ${SYSTEM_USERNAME:-admin}
BROKER_VIRTUALHOST: "${BROKER_VIRTUALHOST:-dbrepo}"
CROSSREF_ENDPOINT: "${CROSSREF_ENDPOINT:-http://data.crossref.org}"
DASHBOARD_SERVICE_ENDPOINT: "${DASHBOARD_SERVICE_ENDPOINT:-http://dashboard-service:8080}"
DATA_SERVICE_ENDPOINT: ${DATA_SERVICE_ENDPOINT:-http://data-service:8080}
DELETED_RECORD: "${DELETED_RECORD:-persistent}"
GRANULARITY: "${GRANULARITY:-YYYY-MM-DDThh:mm:ssZ}"
JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
LOG_LEVEL: ${LOG_LEVEL:-info}
METADATA_DB: "${METADATA_DB:-dbrepo}"
METADATA_DB_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
METADATA_HOST: "${METADATA_HOST:-metadata-db}"
METADATA_JDBC_EXTRA_ARGS: "${METADATA_JDBC_EXTRA_ARGS:-}"
METADATA_PORT: "${METADATA_PORT:-3306}"
METADATA_USERNAME: root
REPOSITORY_NAME: "${REPOSITORY_NAME:-Database Repository}"
ROR_ENDPOINT: "${ROR_ENDPOINT:-https://api.ror.org}"
SEARCH_SERVICE_ENDPOINT: "${SEARCH_SERVICE_ENDPOINT:-http://search-service:8080}"
S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
S3_BUCKET: "${S3_BUCKET:-dbrepo}"
S3_ENDPOINT: "${S3_ENDPOINT:-http://storage-service:9000}"
S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
SPARQL_CONNECTION_TIMEOUT: "${SPARQL_CONNECTION_TIMEOUT:-10000}"
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-small
platform: linux/amd64
depends_on:
dbrepo-auth-service:
condition: service_healthy
dbrepo-broker-service:
condition: service_healthy
dbrepo-data-service:
condition: service_healthy
dbrepo-dashboard-service:
condition: service_healthy
dbrepo-search-service:
condition: service_healthy
dbrepo-metadata-db:
condition: service_healthy
logging:
driver: json-file
dbrepo-analyse-service:
restart: "no"
container_name: dbrepo-analyse-service
hostname: analyse-service
image: registry.datalab.tuwien.ac.at/dbrepo/analyse-service:1.8.1
environment:
AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
S3_BUCKET: "${S3_BUCKET:-dbrepo}"
S3_ENDPOINT: "${S3_ENDPOINT:-storage-service:9000}"
S3_PROTO: "${S3_PROTO:-http}"
S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -sSL localhost:8080/health | grep 'UP' || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
logging:
driver: json-file
dbrepo-broker-service:
restart: "no"
container_name: dbrepo-broker-service
hostname: broker-service
image: docker.io/bitnami/rabbitmq:${RABBITMQ_VERSION}
ports:
- 5672:5672
- 1883:1883
volumes:
- ./config/rabbitmq.conf:/etc/rabbitmq/rabbitmq.conf
- ./config/advanced.config:/etc/rabbitmq/advanced.config
- ./config/enabled_plugins:/etc/rabbitmq/enabled_plugins
- ./config/definitions.json:/app/definitions.json
- broker-service-data:/bitnami/rabbitmq/mnesia
environment:
RABBITMQ_FEATURE_FLAGS: mqtt_v5
depends_on:
dbrepo-identity-service:
condition: service_healthy
healthcheck:
test: rabbitmq-diagnostics -q is_running | grep 'is fully booted and running'
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
logging:
driver: json-file
dbrepo-search-db:
restart: "no"
container_name: dbrepo-search-db
hostname: search-db
image: docker.io/bitnami/opensearch:${OPENSEARCH_VERSION}
volumes:
- search-db-data:/bitnami/opensearch/data
ports:
- "9200:9200"
healthcheck:
test: curl -sSL 127.0.0.1:9200
<<: *healthcheck-params
deploy:
<<: *resources-medium
platform: linux/amd64
logging:
driver: json-file
dbrepo-search-service:
restart: "no"
container_name: dbrepo-search-service
hostname: search-service
image: registry.datalab.tuwien.ac.at/dbrepo/search-service:1.8.1
environment:
AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT_SECRET:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
COLLECTION: ${COLLECTION:-['database','table','column','identifier','unit','concept','user','view']}
LOG_LEVEL: ${LOG_LEVEL:-info}
METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
OPENSEARCH_HOST: ${OPENSEARCH_HOST:-search-db}
OPENSEARCH_PORT: ${OPENSEARCH_PORT:-9200}
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -sSL localhost:8080/health | grep 'UP' || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
logging:
driver: json-file
dbrepo-ui:
restart: "no"
container_name: dbrepo-ui
hostname: ui
image: registry.datalab.tuwien.ac.at/dbrepo/ui:1.8.1
environment:
NUXT_PUBLIC_API_CLIENT: "${BASE_URL:-http://localhost}"
NUXT_PUBLIC_API_SERVER: "${BASE_URL:-http://gateway-service}"
NUXT_PUBLIC_DASHBOARD_URL: "${BASE_URL:-http://localhost}/dashboard"
NUXT_OIDC_PROVIDERS_KEYCLOAK_BASE_URL: "${BASE_URL:-http://localhost}/realms/dbrepo"
NUXT_OIDC_PROVIDERS_KEYCLOAK_AUTHORIZATION_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/auth"
NUXT_OIDC_PROVIDERS_KEYCLOAK_CLIENT_ID: "${AUTH_SERVICE_CLIENT:-dbrepo-client}"
NUXT_OIDC_PROVIDERS_KEYCLOAK_CLIENT_SECRET: "${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}"
NUXT_OIDC_PROVIDERS_KEYCLOAK_LOGOUT_REDIRECT_URI: "${BASE_URL:-http://localhost}"
NUXT_OIDC_PROVIDERS_KEYCLOAK_LOGOUT_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/logout"
NUXT_OIDC_PROVIDERS_KEYCLOAK_REDIRECT_URI: "${BASE_URL:-http://localhost}/auth/keycloak/callback"
NUXT_OIDC_PROVIDERS_KEYCLOAK_TOKEN_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/token"
NUXT_OIDC_PROVIDERS_KEYCLOAK_USER_INFO_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/userinfo"
healthcheck:
test: curl -fsSL 127.0.0.1:3000 && curl -fsSL 127.0.0.1:3000/health
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
depends_on:
dbrepo-search-service:
condition: service_healthy
extra_hosts:
- "localhost:host-gateway"
logging:
driver: json-file
dbrepo-gateway-service:
restart: "no"
container_name: dbrepo-gateway-service
hostname: gateway-service
image: docker.io/nginx:${NGINX_VERSION}
ports:
- "80:8080"
volumes:
- ./config/dbrepo.conf:/etc/nginx/conf.d/default.conf
healthcheck:
test: lsof -i TCP:80 || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-nano
platform: linux/amd64
depends_on:
dbrepo-analyse-service:
condition: service_healthy
dbrepo-broker-service:
condition: service_healthy
dbrepo-metadata-service:
condition: service_healthy
dbrepo-search-db:
condition: service_healthy
dbrepo-dashboard-service:
condition: service_healthy
dbrepo-dashboard-ui:
condition: service_healthy
dbrepo-ui:
condition: service_healthy
logging:
driver: json-file
dbrepo-identity-service:
restart: "no"
container_name: dbrepo-identity-service
hostname: identity-service
image: bitnami/openldap:2.6.8-debian-12-r1
environment:
LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
LDAP_USERS: "${SYSTEM_USERNAME:-admin},${READONLY_USERNAME:-readonly}"
LDAP_PASSWORDS: "${SYSTEM_PASSWORD:-admin},${READONLY_PASSWORD:-readonly}"
LDAP_GROUP: "${ADMIN_GROUP:-system}"
LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
LDAP_ADMIN_DN: "${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at}"
volumes:
- identity-service-data:/bitnami/openldap
healthcheck:
test: "ldapwhoami -H ldap://localhost:1389 -D ${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at} -w ${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin} || exit 1"
<<: *healthcheck-params
deploy:
<<: *resources-nano
platform: linux/amd64
logging:
driver: json-file
dbrepo-search-service-init:
restart: "no"
init: true
container_name: dbrepo-search-service-init
hostname: search-service-init
image: registry.datalab.tuwien.ac.at/dbrepo/search-service-init:1.8.1
environment:
LOG_LEVEL: ${LOG_LEVEL:-info}
METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
OPENSEARCH_HOST: ${OPENSEARCH_HOST:-search-db}
OPENSEARCH_PORT: ${OPENSEARCH_PORT:-9200}
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
deploy:
<<: *resources-nano
platform: linux/amd64
depends_on:
dbrepo-search-db:
condition: service_healthy
dbrepo-metadata-service:
condition: service_healthy
logging:
driver: json-file
dbrepo-dashboard-service-init:
restart: "no"
init: true
container_name: dbrepo-dashboard-service-init
hostname: search-dashboard-init
image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-service-init:1.8.1
environment:
LOG_LEVEL: ${LOG_LEVEL:-info}
DASHBOARD_UI_ENDPOINT: "${DASHBOARD_UI_ENDPOINT:-http://dashboard-ui:3000}"
METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
deploy:
<<: *resources-nano
platform: linux/amd64
depends_on:
dbrepo-dashboard-ui:
condition: service_healthy
dbrepo-metadata-service:
condition: service_healthy
logging:
driver: json-file
dbrepo-storage-service:
restart: "no"
container_name: dbrepo-storage-service
hostname: storage-service
image: docker.io/bitnami/seaweedfs:${SEAWEEDFS_VERSION}
command: [ "server", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9090" ]
volumes:
- ./config/s3_config.json:/app/s3_config.json
ports:
- "9000:9000"
- "8888:8888"
healthcheck:
test: echo "cluster.check" | weed shell | grep "checking master.*ok" || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-nano
platform: linux/amd64
logging:
driver: json-file
dbrepo-metric-db:
restart: "no"
container_name: dbrepo-metric-db
hostname: metric-db
image: docker.io/bitnami/prometheus:${PROMETHEUS_VERSION}
volumes:
- ./config/prometheus.yml:/etc/prometheus/prometheus.yml
- metric-db-data:/opt/bitnami/prometheus/data
healthcheck:
test: promtool check healthy
<<: *healthcheck-params
deploy:
<<: *resources-nano
platform: linux/amd64
logging:
driver: json-file
dbrepo-storage-service-init:
restart: "no"
init: true
container_name: dbrepo-storage-service-init
hostname: storage-service-init
image: registry.datalab.tuwien.ac.at/dbrepo/storage-service-init:1.8.1
environment:
S3_ACCESS_KEY_ID: ${S3_ACCESS_KEY_ID:-seaweedfsadmin}
S3_BUCKET: "${S3_BUCKET:-dbrepo}"
S3_SECRET_ACCESS_KEY: ${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}
STORAGE_ENDPOINT: ${STORAGE_ENDPOINT:-http://storage-service:9000}
deploy:
<<: *resources-nano
platform: linux/amd64
depends_on:
dbrepo-storage-service:
condition: service_healthy
logging:
driver: json-file
dbrepo-data-service:
restart: "no"
container_name: dbrepo-data-service
hostname: data-service
image: registry.datalab.tuwien.ac.at/dbrepo/data-service:1.8.1
environment:
AUTH_SERVICE_CLIENT: "${AUTH_SERVICE_CLIENT:-dbrepo-client}"
AUTH_SERVICE_CLIENT_SECRET: "${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}"
AUTH_SERVICE_ENDPOINT: "${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}"
BASE_URL: "${BASE_URL:-http://localhost}"
BROKER_EXCHANGE_NAME: "${BROKER_EXCHANGE_NAME:-dbrepo}"
BROKER_QUEUE_NAME: "${BROKER_QUEUE_NAME:-dbrepo}"
BROKER_HOST: "${BROKER_ENDPOINT:-broker-service}"
BROKER_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
BROKER_PORT: ${BROKER_PORT:-5672}
BROKER_SERVICE_ENDPOINT: "${BROKER_SERVICE_ENDPOINT:-http://broker-service:15672}"
BROKER_USERNAME: "${SYSTEM_USERNAME:-admin}"
BROKER_VIRTUALHOST: "${BROKER_VIRTUALHOST:-dbrepo}"
CONNECTION_TIMEOUT: ${CONNECTION_TIMEOUT:-60000}
COMPUTE_SERVICE_ENDPOINT: "${COMPUTE_SERVICE_ENDPOINT:-local[2]}"
EXCHANGE_NAME: "${EXCHANGE_NAME:-dbrepo}"
METADATA_SERVICE_ENDPOINT: "${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}"
GRANT_DEFAULT_READ: "${GRANT_DEFAULT_READ:-SELECT}"
GRANT_DEFAULT_WRITE: "${GRANT_DEFAULT_WRITE:-SELECT, CREATE, CREATE VIEW, CREATE ROUTINE, CREATE TEMPORARY TABLES, LOCK TABLES, INDEX, TRIGGER, INSERT, UPDATE, DELETE}"
JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
LOG_LEVEL: ${LOG_LEVEL:-info}
QUEUE_NAME: ${QUEUE_NAME:-dbrepo}
REQUEUE_REJECTED: ${REQUEUE_REJECTED:-false}
ROUTING_KEY: "${ROUTING_KEY:-dbrepo.#}"
S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
S3_BUCKET: "${S3_BUCKET:-dbrepo}"
S3_ENDPOINT: "${S3_ENDPOINT:-http://storage-service:9000}"
S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
SPARK_USER: "${COMPUTE_SERVICE_USERNAME:-spark}"
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1
<<: *healthcheck-params
deploy:
<<: *resources-large
platform: linux/amd64
depends_on:
dbrepo-data-db:
condition: service_healthy
logging:
driver: json-file
dbrepo-dashboard-ui:
restart: "no"
container_name: dbrepo-dashboard-ui
hostname: dashboard-ui
image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-ui:1.8.1
ports:
- "3000:3000"
volumes:
- dashboard-ui-data:/opt/bitnami/grafana/data
environment:
BASE_URL: "${BASE_URL:-http://localhost}"
GF_SERVER_ROOT_URL: http://dashboard-ui:3000/dashboard/
GF_INSTALL_PLUGINS: "yesoreyeram-infinity-datasource"
GF_SECURITY_DISABLE_INITIAL_ADMIN_CREATION: "true"
LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
healthcheck:
test: curl -fsSL --head 127.0.0.1:3000
<<: *healthcheck-params
deploy:
<<: *resources-nano
platform: linux/amd64
extra_hosts:
- "localhost:host-gateway"
logging:
driver: json-file
dbrepo-dashboard-service:
restart: "no"
container_name: dbrepo-dashboard-service
hostname: dashboard-service
image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-service:1.8.1
ports:
- "4070:8080"
environment:
AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
BASE_URL: "${BASE_URL:-http://localhost}"
DASHBOARD_UI_ENDPOINT: "${DASHBOARD_UI_ENDPOINT:-http://dashboard-ui:3000}"
SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
healthcheck:
test: curl -fsSL --head 127.0.0.1:8080/health
<<: *healthcheck-params
deploy:
<<: *resources-micro
platform: linux/amd64
depends_on:
dbrepo-dashboard-ui:
condition: service_healthy
logging:
driver: json-file
.docs/.gitignore 0 → 100644
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# CSS
stylesheets/.sass-cache/
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{% extends "base.html" %}
{% block outdated %}
<strong>WARNING</strong> You're browsing the documentation for an old version of DBRepo. Consider upgrading your project
to <a href="{{ config.site_url }}">
<strong>the latest version</strong>.
</a>
{% endblock %}
\ No newline at end of file
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...@@ -29,8 +29,3 @@ img.img-border { ...@@ -29,8 +29,3 @@ img.img-border {
.md-main .md-content a:not(.action-button):not([tabindex]):hover { .md-main .md-content a:not(.action-button):not([tabindex]):hover {
color: var(--md-primary-fg-color--dark); color: var(--md-primary-fg-color--dark);
border-bottom: 2px solid var(--md-primary-fg-color--dark); } border-bottom: 2px solid var(--md-primary-fg-color--dark); }
.md-banner {
background-color: var(--md-primary-fg-color--dark); }
/*# sourceMappingURL=extra.css.map */
.docs/stylesheets/extra.scss
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...@@ -39,6 +39,6 @@ img.img-border { ...@@ -39,6 +39,6 @@ img.img-border {
} }
.md-banner { //.md-banner {
background-color: var(--md-primary-fg-color--dark); // background-color: var(--md-primary-fg-color--dark);
} //}
\ No newline at end of file \ No newline at end of file
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<?xml version="1.0" ?>
<coverage version="7.7.1" timestamp="1743366739557" lines-valid="1967" lines-covered="1831" line-rate="0.9309" branches-covered="0" branches-valid="0" branch-rate="0" complexity="0">
<!-- Generated by coverage.py: https://coverage.readthedocs.io/en/7.7.1 -->
<!-- Based on https://raw.githubusercontent.com/cobertura/web/master/htdocs/xml/coverage-04.dtd -->
<sources>
<source>/home/mweise/Projects/fda-services/lib/python</source>
</sources>
<packages>
<package name="dbrepo" line-rate="0.8972" branch-rate="0" complexity="0">
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mkdocs.yml
+ 1
− 1
View file @ 91b5dce7
site_name: Database Repository site_name: Database Repository
site_url: https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/1.8/ site_url: https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/
repo_url: https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services repo_url: https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services
repo_name: fda-services repo_name: fda-services
site_author: Research Unit Data Science, Technische Universit&auml;t Wien site_author: Research Unit Data Science, Technische Universit&auml;t Wien
......
versions.json
+ 1
− 1
View file @ 91b5dce7
...@@ -2,7 +2,7 @@ ...@@ -2,7 +2,7 @@
{ {
"version": "1.8", "version": "1.8",
"title": "1.8", "title": "1.8",
"aliases": [] "aliases": ["latest"]
}, },
{ {
"version": "1.7", "version": "1.7",
......
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