diff --git a/.docker/.env b/.docker/.env
deleted file mode 100644
index e50d4f6b5b1c15372029abec7a4fb924a70781ad..0000000000000000000000000000000000000000
--- a/.docker/.env
+++ /dev/null
@@ -1,9 +0,0 @@
-MARIADB_VERSION=11.3.2
-POSTGRES_VERSION=17.0.0
-KEYCLOAK_VERSION=26.0.4
-RABBITMQ_VERSION=3.13.7
-OPENSEARCH_VERSION=2.10.0
-NGINX_VERSION=1.27.3-alpine3.20-slim
-OPENLDAP_VERSION=2.6.8
-SEAWEEDFS_VERSION=3.71.0
-PROMETHEUS_VERSION=2.54.1
\ No newline at end of file
diff --git a/.docker/docker-compose.yml b/.docker/docker-compose.yml
deleted file mode 100644
index 49c5261b6c32b4590f7e3bb130ebbbc67c7ac350..0000000000000000000000000000000000000000
--- a/.docker/docker-compose.yml
+++ /dev/null
@@ -1,663 +0,0 @@
-x-resources-nano: &resources-nano
- resources:
- reservations:
- cpus: '0.1'
- memory: 128M
- limits:
- cpus: '0.15'
- memory: 192M
-
-x-resources-micro: &resources-micro
- resources:
- reservations:
- cpus: '0.25'
- memory: 256M
- limits:
- cpus: '0.375'
- memory: 384M
-
-x-resources-nano-hm: &resources-micro-hm
- resources:
- reservations:
- cpus: '0.25'
- memory: 256M
- limits:
- cpus: '0.375'
- memory: 4096M
-
-x-resources-small: &resources-small
- resources:
- reservations:
- cpus: '0.5'
- memory: 512M
- limits:
- cpus: '0.75'
- memory: 768M
-
-x-resources-medium: &resources-medium
- resources:
- reservations:
- cpus: '0.5'
- memory: 1024M
- limits:
- cpus: '0.75'
- memory: 1536M
-
-x-resources-large: &resources-large
- resources:
- reservations:
- cpus: '1'
- memory: 2048M
- limits:
- cpus: '1.5'
- memory: 3072M
-
-x-healthcheck-params: &healthcheck-params
- interval: 30s
- timeout: 10s
- retries: 15
-
-volumes:
- metadata-db-data:
- data-db-data:
- auth-db-data:
- broker-service-data:
- search-db-data:
- identity-service-data:
- metric-db-data:
- dashboard-ui-data:
-
-services:
- dbrepo-metadata-db:
- restart: "no"
- container_name: dbrepo-metadata-db
- hostname: metadata-db
- image: docker.io/bitnami/mariadb:${MARIADB_VERSION}
- volumes:
- - metadata-db-data:/var/lib/mysql
- - ./config/1_setup-schema.sql:/docker-entrypoint-initdb.d/1_setup-schema.sql
- - ./config/2_setup-data.sql:/docker-entrypoint-initdb.d/2_setup-data.sql
- ports:
- - "3306:3306"
- environment:
- MARIADB_DATABASE: "${METADATA_DB:-dbrepo}"
- MARIADB_EXTRA_FLAGS: "${METADATA_DB_EXTRA_FLAGS:---max_connections=155 --max-statement-time=60}"
- MARIADB_ROOT_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
- healthcheck:
- test: /opt/bitnami/scripts/mariadb/healthcheck.sh --connect --innodb_initialized
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro-hm
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-data-db:
- restart: "no"
- container_name: dbrepo-data-db
- hostname: data-db
- image: docker.io/bitnami/mariadb:${MARIADB_VERSION}
- volumes:
- - data-db-data:/var/lib/mysql
- - ./config/1_grant-user.sql:/docker-entrypoint-initdb.d/1_grant-user.sql
- ports:
- - "3307:3306"
- environment:
- MARIADB_EXTRA_FLAGS: "${DATA_DB_EXTRA_FLAGS:---max_connections=155 --max-statement-time=60}"
- MARIADB_PASSWORD: "${READONLY_PASSWORD:-readonly}"
- MARIADB_ROOT_PASSWORD: "${DATA_DB_PASSWORD:-dbrepo}"
- MARIADB_USER: "${READONLY_USERNAME:-readonly}"
- healthcheck:
- test: /opt/bitnami/scripts/mariadb/healthcheck.sh --connect --innodb_initialized
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro-hm
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-auth-db:
- restart: "no"
- container_name: dbrepo-auth-db
- hostname: auth-db
- image: docker.io/bitnami/postgresql:${POSTGRES_VERSION}
- volumes:
- - auth-db-data:/bitnami/postgresql
- environment:
- POSTGRESQL_DATABASE: "${AUTH_DB_NAME:-keycloak}"
- POSTGRESQL_USERNAME: "${AUTH_DB_USERNAME:-keycloak}"
- POSTGRESQL_PASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
- PGPASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
- healthcheck:
- test: "psql -U ${AUTH_DB_USERNAME:-keycloak} -h 127.0.0.1 -p 5432 -d ${AUTH_DB_NAME:-keycloak} -c 'select version();'"
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-auth-service:
- restart: "no"
- container_name: dbrepo-auth-service
- hostname: auth-service
- image: docker.io/bitnami/keycloak:${KEYCLOAK_VERSION}
- volumes:
- - ./config/import-realms.sh:/docker-entrypoint-initdb.d/import-realms.sh
- - ./config/master-realm.json:/opt/keycloak/data/import/master-realm.json
- - ./config/dbrepo-realm.json:/opt/keycloak/data/import/dbrepo-realm.json
- - ./config/create-event-listener.jar:/opt/bitnami/keycloak/providers/create-event-listener.jar
- ports:
- - "8080:8080"
- environment:
- LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
- LDAP_ADMIN_DN: "${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at}"
- LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
- KEYCLOAK_ENABLE_HEALTH_ENDPOINTS: "true"
- KEYCLOAK_ENABLE_HTTPS: "false"
- KEYCLOAK_ENABLE_STATISTICS: "true"
- KEYCLOAK_DATABASE_HOST: "auth-db"
- KEYCLOAK_DATABASE_NAME: "${AUTH_DB_NAME:-keycloak}"
- KEYCLOAK_DATABASE_USER: "${AUTH_DB_USERNAME:-keycloak}"
- KEYCLOAK_DATABASE_PASSWORD: "${AUTH_DB_PASSWORD:-dbrepo}"
- KEYCLOAK_HOSTNAME: "${BASE_URL:-http://localhost}"
- KEYCLOAK_HOSTNAME_ADMIN: "http://localhost:8080"
- METADATA_SERVICE_ENDPOINT: "${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}"
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -fsS localhost:8080/realms/master
- <<: *healthcheck-params
- deploy:
- <<: *resources-medium
- platform: linux/amd64
- depends_on:
- dbrepo-identity-service:
- condition: service_healthy
- dbrepo-auth-db:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-auth-service-init:
- init: true
- restart: "no"
- container_name: dbrepo-auth-service-init
- image: registry.datalab.tuwien.ac.at/dbrepo/auth-service-init:1.8.1
- environment:
- AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
- METADATA_DB: "${METADATA_DB:-dbrepo}"
- METADATA_DB_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
- METADATA_USERNAME: "root"
- READONLY_USERNAME: "${READONLY_USERNAME:-readonly}"
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: ${SYSTEM_PASSWORD:-admin}
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- depends_on:
- dbrepo-auth-service:
- condition: service_healthy
- dbrepo-gateway-service:
- condition: service_healthy
- dbrepo-metadata-db:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-metadata-service:
- restart: "no"
- container_name: dbrepo-metadata-service
- hostname: metadata-service
- image: registry.datalab.tuwien.ac.at/dbrepo/metadata-service:1.8.1
- environment:
- ADMIN_EMAIL: "${ADMIN_EMAIL:-noreply@localhost}"
- ANALYSE_SERVICE_ENDPOINT: "${ANALYSE_SERVICE_ENDPOINT:-http://analyse-service:8080}"
- AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
- AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT_SECRET:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
- AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
- BASE_URL: "${BASE_URL:-http://localhost}"
- BROKER_EXCHANGE_NAME: ${BROKER_EXCHANGE_NAME:-dbrepo}
- BROKER_QUEUE_NAME: ${BROKER_QUEUE_NAME:-dbrepo}
- BROKER_HOST: "${BROKER_ENDPOINT:-broker-service}"
- BROKER_PASSWORD: ${SYSTEM_PASSWORD:-admin}
- BROKER_PORT: ${BROKER_PORT:-5672}
- BROKER_SERVICE_ENDPOINT: ${BROKER_SERVICE_ENDPOINT:-http://broker-service:15672}
- BROKER_USERNAME: ${SYSTEM_USERNAME:-admin}
- BROKER_VIRTUALHOST: "${BROKER_VIRTUALHOST:-dbrepo}"
- CROSSREF_ENDPOINT: "${CROSSREF_ENDPOINT:-http://data.crossref.org}"
- DASHBOARD_SERVICE_ENDPOINT: "${DASHBOARD_SERVICE_ENDPOINT:-http://dashboard-service:8080}"
- DATA_SERVICE_ENDPOINT: ${DATA_SERVICE_ENDPOINT:-http://data-service:8080}
- DELETED_RECORD: "${DELETED_RECORD:-persistent}"
- GRANULARITY: "${GRANULARITY:-YYYY-MM-DDThh:mm:ssZ}"
- JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
- LOG_LEVEL: ${LOG_LEVEL:-info}
- METADATA_DB: "${METADATA_DB:-dbrepo}"
- METADATA_DB_PASSWORD: "${METADATA_DB_PASSWORD:-dbrepo}"
- METADATA_HOST: "${METADATA_HOST:-metadata-db}"
- METADATA_JDBC_EXTRA_ARGS: "${METADATA_JDBC_EXTRA_ARGS:-}"
- METADATA_PORT: "${METADATA_PORT:-3306}"
- METADATA_USERNAME: root
- REPOSITORY_NAME: "${REPOSITORY_NAME:-Database Repository}"
- ROR_ENDPOINT: "${ROR_ENDPOINT:-https://api.ror.org}"
- SEARCH_SERVICE_ENDPOINT: "${SEARCH_SERVICE_ENDPOINT:-http://search-service:8080}"
- S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
- S3_BUCKET: "${S3_BUCKET:-dbrepo}"
- S3_ENDPOINT: "${S3_ENDPOINT:-http://storage-service:9000}"
- S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
- SPARQL_CONNECTION_TIMEOUT: "${SPARQL_CONNECTION_TIMEOUT:-10000}"
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-small
- platform: linux/amd64
- depends_on:
- dbrepo-auth-service:
- condition: service_healthy
- dbrepo-broker-service:
- condition: service_healthy
- dbrepo-data-service:
- condition: service_healthy
- dbrepo-dashboard-service:
- condition: service_healthy
- dbrepo-search-service:
- condition: service_healthy
- dbrepo-metadata-db:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-analyse-service:
- restart: "no"
- container_name: dbrepo-analyse-service
- hostname: analyse-service
- image: registry.datalab.tuwien.ac.at/dbrepo/analyse-service:1.8.1
- environment:
- AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
- AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
- AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
- JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
- S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
- S3_BUCKET: "${S3_BUCKET:-dbrepo}"
- S3_ENDPOINT: "${S3_ENDPOINT:-storage-service:9000}"
- S3_PROTO: "${S3_PROTO:-http}"
- S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
- METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -sSL localhost:8080/health | grep 'UP' || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-broker-service:
- restart: "no"
- container_name: dbrepo-broker-service
- hostname: broker-service
- image: docker.io/bitnami/rabbitmq:${RABBITMQ_VERSION}
- ports:
- - 5672:5672
- - 1883:1883
- volumes:
- - ./config/rabbitmq.conf:/etc/rabbitmq/rabbitmq.conf
- - ./config/advanced.config:/etc/rabbitmq/advanced.config
- - ./config/enabled_plugins:/etc/rabbitmq/enabled_plugins
- - ./config/definitions.json:/app/definitions.json
- - broker-service-data:/bitnami/rabbitmq/mnesia
- environment:
- RABBITMQ_FEATURE_FLAGS: mqtt_v5
- depends_on:
- dbrepo-identity-service:
- condition: service_healthy
- healthcheck:
- test: rabbitmq-diagnostics -q is_running | grep 'is fully booted and running'
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-search-db:
- restart: "no"
- container_name: dbrepo-search-db
- hostname: search-db
- image: docker.io/bitnami/opensearch:${OPENSEARCH_VERSION}
- volumes:
- - search-db-data:/bitnami/opensearch/data
- ports:
- - "9200:9200"
- healthcheck:
- test: curl -sSL 127.0.0.1:9200
- <<: *healthcheck-params
- deploy:
- <<: *resources-medium
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-search-service:
- restart: "no"
- container_name: dbrepo-search-service
- hostname: search-service
- image: registry.datalab.tuwien.ac.at/dbrepo/search-service:1.8.1
- environment:
- AUTH_SERVICE_CLIENT: ${AUTH_SERVICE_CLIENT:-dbrepo-client}
- AUTH_SERVICE_CLIENT_SECRET: ${AUTH_SERVICE_CLIENT_SECRET:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}
- AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
- COLLECTION: ${COLLECTION:-['database','table','column','identifier','unit','concept','user','view']}
- LOG_LEVEL: ${LOG_LEVEL:-info}
- METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
- OPENSEARCH_HOST: ${OPENSEARCH_HOST:-search-db}
- OPENSEARCH_PORT: ${OPENSEARCH_PORT:-9200}
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -sSL localhost:8080/health | grep 'UP' || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-ui:
- restart: "no"
- container_name: dbrepo-ui
- hostname: ui
- image: registry.datalab.tuwien.ac.at/dbrepo/ui:1.8.1
- environment:
- NUXT_PUBLIC_API_CLIENT: "${BASE_URL:-http://localhost}"
- NUXT_PUBLIC_API_SERVER: "${BASE_URL:-http://gateway-service}"
- NUXT_PUBLIC_DASHBOARD_URL: "${BASE_URL:-http://localhost}/dashboard"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_BASE_URL: "${BASE_URL:-http://localhost}/realms/dbrepo"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_AUTHORIZATION_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/auth"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_CLIENT_ID: "${AUTH_SERVICE_CLIENT:-dbrepo-client}"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_CLIENT_SECRET: "${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_LOGOUT_REDIRECT_URI: "${BASE_URL:-http://localhost}"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_LOGOUT_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/logout"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_REDIRECT_URI: "${BASE_URL:-http://localhost}/auth/keycloak/callback"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_TOKEN_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/token"
- NUXT_OIDC_PROVIDERS_KEYCLOAK_USER_INFO_URL: "${BASE_URL:-http://localhost}/realms/dbrepo/protocol/openid-connect/userinfo"
- healthcheck:
- test: curl -fsSL 127.0.0.1:3000 && curl -fsSL 127.0.0.1:3000/health
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- depends_on:
- dbrepo-search-service:
- condition: service_healthy
- extra_hosts:
- - "localhost:host-gateway"
- logging:
- driver: json-file
-
- dbrepo-gateway-service:
- restart: "no"
- container_name: dbrepo-gateway-service
- hostname: gateway-service
- image: docker.io/nginx:${NGINX_VERSION}
- ports:
- - "80:8080"
- volumes:
- - ./config/dbrepo.conf:/etc/nginx/conf.d/default.conf
- healthcheck:
- test: lsof -i TCP:80 || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- depends_on:
- dbrepo-analyse-service:
- condition: service_healthy
- dbrepo-broker-service:
- condition: service_healthy
- dbrepo-metadata-service:
- condition: service_healthy
- dbrepo-search-db:
- condition: service_healthy
- dbrepo-dashboard-service:
- condition: service_healthy
- dbrepo-dashboard-ui:
- condition: service_healthy
- dbrepo-ui:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-identity-service:
- restart: "no"
- container_name: dbrepo-identity-service
- hostname: identity-service
- image: bitnami/openldap:2.6.8-debian-12-r1
- environment:
- LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
- LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
- LDAP_USERS: "${SYSTEM_USERNAME:-admin},${READONLY_USERNAME:-readonly}"
- LDAP_PASSWORDS: "${SYSTEM_PASSWORD:-admin},${READONLY_PASSWORD:-readonly}"
- LDAP_GROUP: "${ADMIN_GROUP:-system}"
- LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
- LDAP_ADMIN_DN: "${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at}"
- volumes:
- - identity-service-data:/bitnami/openldap
- healthcheck:
- test: "ldapwhoami -H ldap://localhost:1389 -D ${IDENTITY_SERVICE_ADMIN_DN:-cn=admin,dc=dbrepo,dc=at} -w ${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin} || exit 1"
- <<: *healthcheck-params
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-search-service-init:
- restart: "no"
- init: true
- container_name: dbrepo-search-service-init
- hostname: search-service-init
- image: registry.datalab.tuwien.ac.at/dbrepo/search-service-init:1.8.1
- environment:
- LOG_LEVEL: ${LOG_LEVEL:-info}
- METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
- OPENSEARCH_HOST: ${OPENSEARCH_HOST:-search-db}
- OPENSEARCH_PORT: ${OPENSEARCH_PORT:-9200}
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- depends_on:
- dbrepo-search-db:
- condition: service_healthy
- dbrepo-metadata-service:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-dashboard-service-init:
- restart: "no"
- init: true
- container_name: dbrepo-dashboard-service-init
- hostname: search-dashboard-init
- image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-service-init:1.8.1
- environment:
- LOG_LEVEL: ${LOG_LEVEL:-info}
- DASHBOARD_UI_ENDPOINT: "${DASHBOARD_UI_ENDPOINT:-http://dashboard-ui:3000}"
- METADATA_SERVICE_ENDPOINT: ${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- depends_on:
- dbrepo-dashboard-ui:
- condition: service_healthy
- dbrepo-metadata-service:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-storage-service:
- restart: "no"
- container_name: dbrepo-storage-service
- hostname: storage-service
- image: docker.io/bitnami/seaweedfs:${SEAWEEDFS_VERSION}
- command: [ "server", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9090" ]
- volumes:
- - ./config/s3_config.json:/app/s3_config.json
- ports:
- - "9000:9000"
- - "8888:8888"
- healthcheck:
- test: echo "cluster.check" | weed shell | grep "checking master.*ok" || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-metric-db:
- restart: "no"
- container_name: dbrepo-metric-db
- hostname: metric-db
- image: docker.io/bitnami/prometheus:${PROMETHEUS_VERSION}
- volumes:
- - ./config/prometheus.yml:/etc/prometheus/prometheus.yml
- - metric-db-data:/opt/bitnami/prometheus/data
- healthcheck:
- test: promtool check healthy
- <<: *healthcheck-params
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- logging:
- driver: json-file
-
- dbrepo-storage-service-init:
- restart: "no"
- init: true
- container_name: dbrepo-storage-service-init
- hostname: storage-service-init
- image: registry.datalab.tuwien.ac.at/dbrepo/storage-service-init:1.8.1
- environment:
- S3_ACCESS_KEY_ID: ${S3_ACCESS_KEY_ID:-seaweedfsadmin}
- S3_BUCKET: "${S3_BUCKET:-dbrepo}"
- S3_SECRET_ACCESS_KEY: ${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}
- STORAGE_ENDPOINT: ${STORAGE_ENDPOINT:-http://storage-service:9000}
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- depends_on:
- dbrepo-storage-service:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-data-service:
- restart: "no"
- container_name: dbrepo-data-service
- hostname: data-service
- image: registry.datalab.tuwien.ac.at/dbrepo/data-service:1.8.1
- environment:
- AUTH_SERVICE_CLIENT: "${AUTH_SERVICE_CLIENT:-dbrepo-client}"
- AUTH_SERVICE_CLIENT_SECRET: "${AUTH_SERVICE_CLIENT:-MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG}"
- AUTH_SERVICE_ENDPOINT: "${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}"
- BASE_URL: "${BASE_URL:-http://localhost}"
- BROKER_EXCHANGE_NAME: "${BROKER_EXCHANGE_NAME:-dbrepo}"
- BROKER_QUEUE_NAME: "${BROKER_QUEUE_NAME:-dbrepo}"
- BROKER_HOST: "${BROKER_ENDPOINT:-broker-service}"
- BROKER_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- BROKER_PORT: ${BROKER_PORT:-5672}
- BROKER_SERVICE_ENDPOINT: "${BROKER_SERVICE_ENDPOINT:-http://broker-service:15672}"
- BROKER_USERNAME: "${SYSTEM_USERNAME:-admin}"
- BROKER_VIRTUALHOST: "${BROKER_VIRTUALHOST:-dbrepo}"
- CONNECTION_TIMEOUT: ${CONNECTION_TIMEOUT:-60000}
- COMPUTE_SERVICE_ENDPOINT: "${COMPUTE_SERVICE_ENDPOINT:-local[2]}"
- EXCHANGE_NAME: "${EXCHANGE_NAME:-dbrepo}"
- METADATA_SERVICE_ENDPOINT: "${METADATA_SERVICE_ENDPOINT:-http://metadata-service:8080}"
- GRANT_DEFAULT_READ: "${GRANT_DEFAULT_READ:-SELECT}"
- GRANT_DEFAULT_WRITE: "${GRANT_DEFAULT_WRITE:-SELECT, CREATE, CREATE VIEW, CREATE ROUTINE, CREATE TEMPORARY TABLES, LOCK TABLES, INDEX, TRIGGER, INSERT, UPDATE, DELETE}"
- JWT_PUBKEY: "${JWT_PUBKEY:-MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAqqnHQ2BWWW9vDNLRCcxD++xZg/16oqMo/c1l+lcFEjjAIJjJp/HqrPYU/U9GvquGE6PbVFtTzW1KcKawOW+FJNOA3CGo8Q1TFEfz43B8rZpKsFbJKvQGVv1Z4HaKPvLUm7iMm8Hv91cLduuoWx6Q3DPe2vg13GKKEZe7UFghF+0T9u8EKzA/XqQ0OiICmsmYPbwvf9N3bCKsB/Y10EYmZRb8IhCoV9mmO5TxgWgiuNeCTtNCv2ePYqL/U0WvyGFW0reasIK8eg3KrAUj8DpyOgPOVBn3lBGf+3KFSYi+0bwZbJZWqbC/Xlk20Go1YfeJPRIt7ImxD27R/lNjgDO/MwIDAQAB}"
- LOG_LEVEL: ${LOG_LEVEL:-info}
- QUEUE_NAME: ${QUEUE_NAME:-dbrepo}
- REQUEUE_REJECTED: ${REQUEUE_REJECTED:-false}
- ROUTING_KEY: "${ROUTING_KEY:-dbrepo.#}"
- S3_ACCESS_KEY_ID: "${S3_ACCESS_KEY_ID:-seaweedfsadmin}"
- S3_BUCKET: "${S3_BUCKET:-dbrepo}"
- S3_ENDPOINT: "${S3_ENDPOINT:-http://storage-service:9000}"
- S3_SECRET_ACCESS_KEY: "${S3_SECRET_ACCESS_KEY:-seaweedfsadmin}"
- SPARK_USER: "${COMPUTE_SERVICE_USERNAME:-spark}"
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1
- <<: *healthcheck-params
- deploy:
- <<: *resources-large
- platform: linux/amd64
- depends_on:
- dbrepo-data-db:
- condition: service_healthy
- logging:
- driver: json-file
-
- dbrepo-dashboard-ui:
- restart: "no"
- container_name: dbrepo-dashboard-ui
- hostname: dashboard-ui
- image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-ui:1.8.1
- ports:
- - "3000:3000"
- volumes:
- - dashboard-ui-data:/opt/bitnami/grafana/data
- environment:
- BASE_URL: "${BASE_URL:-http://localhost}"
- GF_SERVER_ROOT_URL: http://dashboard-ui:3000/dashboard/
- GF_INSTALL_PLUGINS: "yesoreyeram-infinity-datasource"
- GF_SECURITY_DISABLE_INITIAL_ADMIN_CREATION: "true"
- LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
- LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
- LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
- healthcheck:
- test: curl -fsSL --head 127.0.0.1:3000
- <<: *healthcheck-params
- deploy:
- <<: *resources-nano
- platform: linux/amd64
- extra_hosts:
- - "localhost:host-gateway"
- logging:
- driver: json-file
-
- dbrepo-dashboard-service:
- restart: "no"
- container_name: dbrepo-dashboard-service
- hostname: dashboard-service
- image: registry.datalab.tuwien.ac.at/dbrepo/dashboard-service:1.8.1
- ports:
- - "4070:8080"
- environment:
- AUTH_SERVICE_ENDPOINT: ${AUTH_SERVICE_ENDPOINT:-http://auth-service:8080}
- BASE_URL: "${BASE_URL:-http://localhost}"
- DASHBOARD_UI_ENDPOINT: "${DASHBOARD_UI_ENDPOINT:-http://dashboard-ui:3000}"
- SYSTEM_USERNAME: "${SYSTEM_USERNAME:-admin}"
- SYSTEM_PASSWORD: "${SYSTEM_PASSWORD:-admin}"
- healthcheck:
- test: curl -fsSL --head 127.0.0.1:8080/health
- <<: *healthcheck-params
- deploy:
- <<: *resources-micro
- platform: linux/amd64
- depends_on:
- dbrepo-dashboard-ui:
- condition: service_healthy
- logging:
- driver: json-file
diff --git a/.docs/.gitignore b/.docs/.gitignore
new file mode 100644
index 0000000000000000000000000000000000000000..7c1e8f2dbd6cd578d9043b4733f599fa5412c65b
--- /dev/null
+++ b/.docs/.gitignore
@@ -0,0 +1,2 @@
+# CSS
+stylesheets/.sass-cache/
\ No newline at end of file
diff --git a/.docs/overrides/main.html b/.docs/overrides/main.html
new file mode 100644
index 0000000000000000000000000000000000000000..82cc4e788c620af27cbc476e78ab7e33f7bfda45
--- /dev/null
+++ b/.docs/overrides/main.html
@@ -0,0 +1,8 @@
+{% extends "base.html" %}
+
+{% block outdated %}
+<strong>WARNING</strong> You're browsing the documentation for an old version of DBRepo. Consider upgrading your project
+to <a href="{{ config.site_url }}">
+ <strong>the latest version</strong>.
+</a>
+{% endblock %}
\ No newline at end of file
diff --git a/.docs/stylesheets/.sass-cache/04e8358553d0156a67b95297c054a24cd7eab863/_colors.scssc b/.docs/stylesheets/.sass-cache/04e8358553d0156a67b95297c054a24cd7eab863/_colors.scssc
deleted file mode 100644
index de13f4de6f248642ae9aa84dbd05890d096fb628..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/04e8358553d0156a67b95297c054a24cd7eab863/_typeset.scssc b/.docs/stylesheets/.sass-cache/04e8358553d0156a67b95297c054a24cd7eab863/_typeset.scssc
deleted file mode 100644
index f6a80da3534c65beab6b28b85ea0a3a10ee15266..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/_config.scssc b/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/_config.scssc
deleted file mode 100644
index 20fac36e42b9c065be8d5e1e50ebd22c4e821fdd..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/custom.scssc b/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/custom.scssc
deleted file mode 100644
index ee214c5de92c28b3cbcb078e4d2aa2d2450a4b32..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/extra.scssc b/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/extra.scssc
deleted file mode 100644
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diff --git a/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/main.scssc b/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/main.scssc
deleted file mode 100644
index ec1210c17ed880a36d713cdf087f2134f3afaee2..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/palette.scssc b/.docs/stylesheets/.sass-cache/10990fa183107f4149f38216a4d00fe324a8131e/palette.scssc
deleted file mode 100644
index 7f71c61f4d4b2e986bb266940ac47ca07d60a0b3..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/2c2cf16e0f132dd6db83c98c5ec5508783194a8a/_hero.scssc b/.docs/stylesheets/.sass-cache/2c2cf16e0f132dd6db83c98c5ec5508783194a8a/_hero.scssc
deleted file mode 100644
index cca5acddb8b8535825e439d898892eadbba973f9..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/bfcb905bbd9d3baa11ae35b689811451966d11bf/_accent.scssc b/.docs/stylesheets/.sass-cache/bfcb905bbd9d3baa11ae35b689811451966d11bf/_accent.scssc
deleted file mode 100644
index 5edd0c57d74b636ef1f7b2f4cea20a558105c465..0000000000000000000000000000000000000000
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diff --git a/.docs/stylesheets/.sass-cache/bfcb905bbd9d3baa11ae35b689811451966d11bf/_scheme.scssc b/.docs/stylesheets/.sass-cache/bfcb905bbd9d3baa11ae35b689811451966d11bf/_scheme.scssc
deleted file mode 100644
index 1ad33e4220951570b80a301e336f7a390c5b7314..0000000000000000000000000000000000000000
Binary files a/.docs/stylesheets/.sass-cache/bfcb905bbd9d3baa11ae35b689811451966d11bf/_scheme.scssc and /dev/null differ
diff --git a/.docs/stylesheets/extra.css b/.docs/stylesheets/extra.css
index 5219d289c4fc675c873aaedc9f40720564986db8..31429800ab9d179411553e3537debc1dc6e1c538 100644
--- a/.docs/stylesheets/extra.css
+++ b/.docs/stylesheets/extra.css
@@ -29,8 +29,3 @@ img.img-border {
.md-main .md-content a:not(.action-button):not([tabindex]):hover {
color: var(--md-primary-fg-color--dark);
border-bottom: 2px solid var(--md-primary-fg-color--dark); }
-
-.md-banner {
- background-color: var(--md-primary-fg-color--dark); }
-
-/*# sourceMappingURL=extra.css.map */
diff --git a/.docs/stylesheets/extra.scss b/.docs/stylesheets/extra.scss
index 5ea1aa41fdd09551b18725c036deee01ab31eea0..13615172ff42a2f6337b2f54548ea183fe769fda 100644
--- a/.docs/stylesheets/extra.scss
+++ b/.docs/stylesheets/extra.scss
@@ -39,6 +39,6 @@ img.img-border {
}
-.md-banner {
- background-color: var(--md-primary-fg-color--dark);
-}
\ No newline at end of file
+//.md-banner {
+// background-color: var(--md-primary-fg-color--dark);
+//}
\ No newline at end of file
diff --git a/dbrepo-auth-service/listeners/target/create-event-listener.jar b/dbrepo-auth-service/listeners/target/create-event-listener.jar
deleted file mode 100644
index f1c8ff378169a787cc021fa5cb2eafc7795170a0..0000000000000000000000000000000000000000
Binary files a/dbrepo-auth-service/listeners/target/create-event-listener.jar and /dev/null differ
diff --git a/lib/python/coverage.xml b/lib/python/coverage.xml
deleted file mode 100644
index ba3da4f2e6334a47f8e1fc55af11e024bbf698fc..0000000000000000000000000000000000000000
--- a/lib/python/coverage.xml
+++ /dev/null
@@ -1,2013 +0,0 @@
-<?xml version="1.0" ?>
-<coverage version="7.7.1" timestamp="1743366739557" lines-valid="1967" lines-covered="1831" line-rate="0.9309" branches-covered="0" branches-valid="0" branch-rate="0" complexity="0">
- <!-- Generated by coverage.py: https://coverage.readthedocs.io/en/7.7.1 -->
- <!-- Based on https://raw.githubusercontent.com/cobertura/web/master/htdocs/xml/coverage-04.dtd -->
- <sources>
- <source>/home/mweise/Projects/fda-services/lib/python</source>
- </sources>
- <packages>
- <package name="dbrepo" line-rate="0.8972" branch-rate="0" complexity="0">
- <classes>
- <class name="RestClient.py" filename="dbrepo/RestClient.py" complexity="0" line-rate="0.8972" branch-rate="0">
- <methods/>
- <lines>
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diff --git a/mkdocs.yml b/mkdocs.yml
index 5971388b112696fa9bb8fec1ce6b8510d081da84..7060289640e3f0034d0e20405526d9b512aa26ed 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -1,5 +1,5 @@
site_name: Database Repository
-site_url: https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/1.8/
+site_url: https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/
repo_url: https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services
repo_name: fda-services
site_author: Research Unit Data Science, Technische Universität Wien
diff --git a/versions.json b/versions.json
index 0fafe8664cc9c3d6369b92b643fb53ae98cb1cbf..f2244538ba971ec76911ffacec64c9bf23e5207b 100644
--- a/versions.json
+++ b/versions.json
@@ -2,7 +2,7 @@
{
"version": "1.8",
"title": "1.8",
- "aliases": []
+ "aliases": ["latest"]
},
{
"version": "1.7",