minor things

dartwrf/assim_synth_obs.py

@@ -229,13 +229,13 @@ def archive_filteroutput(time):
 def get_parametrized_error(obscfg, osf_prior):
     """Calculate the parametrized error for an ObsConfig (one obs type)
 
-    Args
-        obscfg (object):                configuration of observations
-        osf_prior (obsseq.ObsRecord):   contains truth and prior values from obs_seq.final
+    Args:
+        obscfg (object): Configuration of observations
+        osf_prior (obsseq.ObsRecord): Contains truth and prior values from obs_seq.final
                                         (output of ./final in evaluate-mode (no posterior))
 
-    Returns
-        np.array            observation error std-dev for assimilation
+    Returns:
+        np.array: observation error std-dev for assimilation
     """
     Hx_prior = osf_prior.get_prior_Hx().T
     Hx_truth = osf_prior.get_truth_Hx()
@@ -256,8 +256,7 @@ def set_obserr_assimilate_in_obsseqout(oso, osf_prior, outfile="./obs_seq.out"):
     """"Overwrite existing variance values in obs_seq.out files
     
     Args:
-        oso (ObsSeq) :  python representation of obs_seq.out file, 
-                        will be modified and written to file
+        oso (ObsSeq): python representation of obs_seq.out file, will be modified and written to file
         osf_prior (ObsSeq): python representation of obs_seq.final (output of filter in evaluate-mode without posterior)
                             contains prior values; used for parameterized errors
 

dartwrf/config

-../config/
\ No newline at end of file

dartwrf/obsseq_to_netcdf.py

@@ -2,7 +2,7 @@ import os, sys, glob, warnings
 
 from config.cfg import exp
 from config.cluster import cluster
-import run_obs_diag as rod
+import dartwrf.run_obs_diag as rod
 
 def listdir_dirs(path):
     return [a for a in os.listdir(path) if os.path.isdir(os.path.join(path, a))]

dartwrf/prepare_wrfrundir.py

@@ -4,7 +4,7 @@ import datetime as dt
 from config.cfg import exp
 from config.cluster import cluster
 from dartwrf.utils import symlink, copy, link_contents
-import prepare_namelist
+from dartrwrf import prepare_namelist
 
 if __name__ == '__main__':
 

docs/source/dartwrf.rst

@@ -7,7 +7,6 @@ Subpackages
 .. toctree::
    :maxdepth: 4
 
-   dartwrf.config
    dartwrf.obs
 
 Submodules

docs/source/index.rst

@@ -18,7 +18,7 @@ DART-WRF is available at `github.com/lkugler/DART-WRF <https://github.com/lkugle
 Other helpful resources
 -----------------------
 
-**DART documentation** `[here] <https://docs.dart.ucar.edu/en/latest/README.html>`_
+**DART documentation** `[docs.ucar.edu] <https://docs.dart.ucar.edu/en/latest/README.html>`_
 **WRF user guide** `[here] <http://www2.mmm.ucar.edu/wrf/users/docs/user_guide_v4/v4.2/WRFUsersGuide_v42.pdf>`_