@@ -73,7 +73,7 @@ When creating configurations, catsr currently only supports the hybrid parametri
...
@@ -73,7 +73,7 @@ When creating configurations, catsr currently only supports the hybrid parametri
This limitation does not apply when external CATS configuration files are used to run CATS in catsr.
This limitation does not apply when external CATS configuration files are used to run CATS in catsr.
## Configuration parameter naming scheme
## Configuration parameter naming scheme
CATS configuration files are (INI files)[https://en.wikipedia.org/wiki/INI_file]. INI files are human readable text files, structured into sections, which contain key-value pairs. They can be e.g. read and modified with the [ini package](https://cran.r-project.org/package=ini).
CATS configuration files are [INI files](https://en.wikipedia.org/wiki/INI_file). INI files are human readable text files, structured into sections, which contain key-value pairs. They can be e.g. read and modified with the [ini package](https://cran.r-project.org/package=ini). For a specification of the CATS configuration file format and a full list of available configuration parameters see the [CATS manual, sections Configuration files and Configuration parameters](https://cats.univie.ac.at/docs/cats-manual.pdf).
The name of a configuration parameter in catsr is in the form of ```section.key_name```, which would correspond
The name of a configuration parameter in catsr is in the form of ```section.key_name```, which would correspond
to this entry in a configuration file
to this entry in a configuration file
...
@@ -90,7 +90,7 @@ type = suitability
...
@@ -90,7 +90,7 @@ type = suitability
interpolation interval = 10
interpolation interval = 10
```
```
For a full list of available configuration parameters see the [CATS manual, sections Configuration files and Configuration parameters](https://cats.univie.ac.at/docs/cats-manual.pdf).
## Running a CATS simulation
## Running a CATS simulation
Before you can run CATS, it needs to be installed first.
Before you can run CATS, it needs to be installed first.