diff --git a/README.md b/README.md index 8fdb2f5c3746cbec24d497995dd0101e475eac41..a6aaea2f181a0f8caa54fc428349108736e5b5b6 100644 --- a/README.md +++ b/README.md @@ -60,8 +60,8 @@ University of California, San Diego ## Version -1.9.1 +1.9.3 ## Last Updated -Friday, September 3rd, 2021 +Saturday, September 4th, 2021 diff --git a/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 b/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 new file mode 100644 index 0000000000000000000000000000000000000000..9e22008190504adc3746043daa5b4ec9eb5159a1 --- /dev/null +++ b/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 @@ -0,0 +1,117 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 + +%labels + + APPLICATION_NAME OSU Micro-Benchmarks + APPLICATION_VERSION 5.8 + APPLICATION_URL http://mvapich.cse.ohio-state.edu/benchmarks + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210909 + +%setup + +%environment + + # Set OMB major and minor version numbers, root and + # installation directories + export OMB_MAJOR='5' + export OMB_MINOR='8' + export OMB_VERSION="${OMB_MAJOR}.${OMB_MINOR}" + export OMB_ROOT_DIR='/opt/omb' + export OMB_INSTALL_DIR="${OMB_ROOT_DIR}/${OMB_VERSION}" + + # Set paths to OSU Microbenchmarks binaries + export PATH="${OMB_INSTALL_DIR}/collective:${PATH}" + export PATH="${OMB_INSTALL_DIR}/one-sided:${PATH}" + export PATH="${OMB_INSTALL_DIR}/pt2pt:${PATH}" + export PATH="${OMB_INSTALL_DIR}/startup:${PATH}" + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Set NVIDIA CUDA version + export CUDA_MAJOR='10' + export CUDA_MINOR='2' + export CUDA_VERSION="${CUDA_MAJOR}.${CUDA_MINOR}" + + # Set paths to CUDA binaries and libraries + export CUDA_HOME="/usr/local/cuda-${CUDA_VERSION}" + export PATH="${CUDA_HOME}/bin${PATH:+:${PATH}}" + export LD_LIBRARY_PATH="${CUDA_HOME}/lib64${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}}" + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + # Set paths to OpenMPI binaries and libraries + export PATH="${OMPI_INSTALL_DIR}/bin:${PATH}" + export LD_LIBRARY_PATH="${OMPI_INSTALL_DIR}/lib:${LD_LIBRARY_PATH}" + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + cd /tmp + + # Set OMB major and minor version numbers, root and + # installation directories + export OMB_ROOT_URL='http://mvapich.cse.ohio-state.edu/download/mvapich' + export OMB_MAJOR='5' + export OMB_MINOR='8' + export OMB_VERSION="${OMB_MAJOR}.${OMB_MINOR}" + export OMB_ROOT_DIR='/opt/omb' + export OMB_INSTALL_DIR="${OMB_ROOT_DIR}/${OMB_VERSION}" + + # Download, build, and install OSU Microbenchmarks + wget "${OMB_ROOT_URL}/osu-micro-benchmarks-${OMB_VERSION}.tgz" + tar -xf "osu-micro-benchmarks-${OMB_VERSION}.tgz" + cd "osu-micro-benchmarks-${OMB_VERSION}" + ./configure --prefix="${OMB_INSTALL_DIR}" CC='mpicc' CXX='mpicxx' --enable-cuda --with-cuda-include="${CUDA_HOME}/include" --with-cuda-libpath="${CUDA_HOME}/lib64" + make + make install + + # Reorganize OSU Microbenchmarks directory structure + cd "${OMB_INSTALL_DIR}" + mv libexec/osu-micro-benchmarks/mpi/collective ./ + mv libexec/osu-micro-benchmarks/mpi/one-sided ./ + mv libexec/osu-micro-benchmarks/mpi/pt2pt ./ + mv libexec/osu-micro-benchmarks/mpi/startup ./ + rm -rf libexec + + cd /tmp + + # Remove OMB build directory and source tarball + rm -rf "osu-micro-benchmarks-${OMB_VERSION}" + rm "osu-micro-benchmarks-${OMB_VERSION}.tgz" + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test diff --git a/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 b/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 new file mode 100644 index 0000000000000000000000000000000000000000..c94e326263924f7e422080a1f61ea60e6543b91b --- /dev/null +++ b/definition-files/omb/Singularity.omb-5.8-ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 @@ -0,0 +1,107 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 + +%labels + + APPLICATION_NAME OSU Micro-Benchmarks + APPLICATION_VERSION 5.8 + APPLICATION_URL http://mvapich.cse.ohio-state.edu/benchmarks + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210908 + +%setup + +%environment + + # Set OMB major and minor version numbers, root and + # installation directories + export OMB_MAJOR='5' + export OMB_MINOR='8' + export OMB_VERSION="${OMB_MAJOR}.${OMB_MINOR}" + export OMB_ROOT_DIR='/opt/omb' + export OMB_INSTALL_DIR="${OMB_ROOT_DIR}/${OMB_VERSION}" + + # Set paths to OSU Microbenchmarks binaries + export PATH="${OMB_INSTALL_DIR}/collective:${PATH}" + export PATH="${OMB_INSTALL_DIR}/one-sided:${PATH}" + export PATH="${OMB_INSTALL_DIR}/pt2pt:${PATH}" + export PATH="${OMB_INSTALL_DIR}/startup:${PATH}" + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + # Set paths to OpenMPI binaries and libraries + export PATH="${OMPI_INSTALL_DIR}/bin:${PATH}" + export LD_LIBRARY_PATH="${OMPI_INSTALL_DIR}/lib:${LD_LIBRARY_PATH}" + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + cd /tmp + + # Set OMB major and minor version numbers, root and + # installation directories + export OMB_ROOT_URL='http://mvapich.cse.ohio-state.edu/download/mvapich' + export OMB_MAJOR='5' + export OMB_MINOR='8' + export OMB_VERSION="${OMB_MAJOR}.${OMB_MINOR}" + export OMB_ROOT_DIR='/opt/omb' + export OMB_INSTALL_DIR="${OMB_ROOT_DIR}/${OMB_VERSION}" + + # Download, build, and install OSU Microbenchmarks + wget "${OMB_ROOT_URL}/osu-micro-benchmarks-${OMB_VERSION}.tgz" + tar -xf "osu-micro-benchmarks-${OMB_VERSION}.tgz" + cd "osu-micro-benchmarks-${OMB_VERSION}" + ./configure --prefix="${OMB_INSTALL_DIR}" CC='mpicc' CXX='mpicxx' + make + make install + + # Reorganize OSU Microbenchmarks directory structure + cd "${OMB_INSTALL_DIR}" + mv libexec/osu-micro-benchmarks/mpi/collective ./ + mv libexec/osu-micro-benchmarks/mpi/one-sided ./ + mv libexec/osu-micro-benchmarks/mpi/pt2pt ./ + mv libexec/osu-micro-benchmarks/mpi/startup ./ + rm -rf libexec + + cd /tmp + + # Remove OMB build directory and source tarball + rm -rf "osu-micro-benchmarks-${OMB_VERSION}" + rm "osu-micro-benchmarks-${OMB_VERSION}.tgz" + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test diff --git a/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1 b/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1 new file mode 100644 index 0000000000000000000000000000000000000000..85a749a3f8c5e3e100b7070991e51992007ead8e --- /dev/null +++ b/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1 @@ -0,0 +1,91 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04-cuda-10.2 + +%labels + + APPLICATION_NAME ubuntu + cuda mlnx-ofed + APPLICATION_VERSION 18.04 + 10.2. + 4.6-1.0.1.1 + APPLICATION_URL https://www.mellanox.com/products/infiniband-drivers/linux/mlnx_ofed + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210908 + +%setup + +%environment + + # Set Mellanox OFED version, operating system, and hardware platform + export MLNX_OFED_VERSION='4.6-1.0.1.1' + export MLNX_OS_VERSION='ubuntu18.04' + export MLNX_PLATFORM='x86_64' + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + # Install all dependencies and/or prerequisites for Mellanox OFED + apt-get -y install bison + apt-get -y install chrpath + apt-get -y install debhelper + apt-get -y install dpatch + apt-get -y install flex + apt-get -y install graphviz + apt-get -y install libnl-3-dev + apt-get -y install libnl-route-3-200 + apt-get -y install tcl-dev + apt-get -y install tk-dev + apt-get -y install swig + + cd /tmp + + # Set Mellanox OFED version, operating system, and hardware platform + export MLNX_ROOT_URL='http://www.mellanox.com/downloads/ofed' + export MLNX_OFED_VERSION='4.6-1.0.1.1' + export MLNX_OS_VERSION='ubuntu18.04' + export MLNX_PLATFORM='x86_64' + + # Download and install Mellanox OFED drivers and supporting + # libraries for user space access to Ethernet, RDMA, and Infiniband. + # https://docs.mellanox.com/pages/releaseview.action?pageId=15049785 + wget "${MLNX_ROOT_URL}/MLNX_OFED-${MLNX_OFED_VERSION}/MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + tar -xf "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + cd "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}" + ./mlnxofedinstall --user-space-only --without-fw-update --force + + cd /tmp + + # Remove Mellanox OFED archive directory and tarball + rm -rf "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}" + rm "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + + # Install additional tools + apt-get -y install numactl + apt-get -y install libnuma-dev + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test diff --git a/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 b/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 new file mode 100644 index 0000000000000000000000000000000000000000..7493e57a749078149da0d7ea56ce7cc1d886242f --- /dev/null +++ b/definition-files/ubuntu/Singularity.ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 @@ -0,0 +1,106 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04-cuda-10.2-mlnx-ofed-4.6-1.0.1.1 + +%labels + + APPLICATION_NAME ubuntu + cuda + mlnx-ofed + openmpi + APPLICATION_VERSION 18.04 + 10.2. + 4.6-1.0.1.1 + 3.1.4 + APPLICATION_URL https://www.open-mpi.org + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210909 + +%setup + +%environment + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + # Set paths to OpenMPI binaries and libraries + export PATH="${OMPI_INSTALL_DIR}/bin:${PATH}" + export LD_LIBRARY_PATH="${OMPI_INSTALL_DIR}/lib:${LD_LIBRARY_PATH}" + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Set NVIDIA CUDA version + export CUDA_MAJOR='10' + export CUDA_MINOR='2' + export CUDA_VERSION="${CUDA_MAJOR}.${CUDA_MINOR}" + + # Set paths to CUDA binaries and libraries + export CUDA_HOME="/usr/local/cuda-${CUDA_VERSION}" + export PATH="${CUDA_HOME}/bin${PATH:+:${PATH}}" + export LD_LIBRARY_PATH="${CUDA_HOME}/lib64${LD_LIBRARY_PATH:+:${LD_LIBRARY_PATH}}" + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + # Install OpenMPI dependencies + apt-get -y install zlib1g-dev + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_ROOT_URL='https://download.open-mpi.org/release/open-mpi' + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + cd /tmp + + # Download, build, and install OpenMPI + wget "${OMPI_ROOT_URL}/v${OMPI_MAJOR}.${OMPI_MINOR}/openmpi-${OMPI_VERSION}.tar.gz" + tar -xf "openmpi-${OMPI_VERSION}.tar.gz" + cd "openmpi-${OMPI_VERSION}" + ./configure --prefix="${OMPI_INSTALL_DIR}" --enable-shared \ + --disable-silent-rules --disable-builtin-atomics --enable-static \ + --without-hcoll --without-psm --without-knem --without-psm2 \ + --with-verbs=/usr --without-ofi --without-mxm --without-fca \ + --without-xpmem --without-ucx --without-cma --without-slurm \ + --without-tm --without-loadleveler --without-alps --without-lsf \ + --without-sge --disable-memchecker --disable-java \ + --disable-mpi-java --with-cuda --enable-mpi-cxx \ + --enable-cxx-exceptions + make all install + + cd /tmp + + # Remove OpenMPI build directory and source tarball + rm -rf "openmpi-${OMPI_VERSION}" + rm "openmpi-${OMPI_VERSION}.tar.gz" + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test diff --git a/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1 b/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1 new file mode 100644 index 0000000000000000000000000000000000000000..69e4e37c88fe53116c1b87203564f0e7647fa33d --- /dev/null +++ b/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1 @@ -0,0 +1,91 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04 + +%labels + + APPLICATION_NAME ubuntu + mlnx-ofed + APPLICATION_VERSION 18.04 + 4.6-1.0.1.1 + APPLICATION_URL https://www.mellanox.com/products/infiniband-drivers/linux/mlnx_ofed + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210908 + +%setup + +%environment + + # Set Mellanox OFED version, operating system, and hardware platform + export MLNX_OFED_VERSION='4.6-1.0.1.1' + export MLNX_OS_VERSION='ubuntu18.04' + export MLNX_PLATFORM='x86_64' + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + # Install all dependencies and/or prerequisites for Mellanox OFED + apt-get -y install bison + apt-get -y install chrpath + apt-get -y install debhelper + apt-get -y install dpatch + apt-get -y install flex + apt-get -y install graphviz + apt-get -y install libnl-3-dev + apt-get -y install libnl-route-3-200 + apt-get -y install tcl-dev + apt-get -y install tk-dev + apt-get -y install swig + + cd /tmp + + # Set Mellanox OFED version, operating system, and hardware platform + export MLNX_ROOT_URL='http://www.mellanox.com/downloads/ofed' + export MLNX_OFED_VERSION='4.6-1.0.1.1' + export MLNX_OS_VERSION='ubuntu18.04' + export MLNX_PLATFORM='x86_64' + + # Download and install Mellanox OFED drivers and supporting + # libraries for user space access to Ethernet, RDMA, and Infiniband. + # https://docs.mellanox.com/pages/releaseview.action?pageId=15049785 + wget "${MLNX_ROOT_URL}/MLNX_OFED-${MLNX_OFED_VERSION}/MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + tar -xf "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + cd "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}" + ./mlnxofedinstall --user-space-only --without-fw-update --force + + cd /tmp + + # Remove Mellanox OFED archive directory and tarball + rm -rf "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}" + rm "MLNX_OFED_LINUX-${MLNX_OFED_VERSION}-${MLNX_OS_VERSION}-${MLNX_PLATFORM}.tgz" + + # Install additional tools + apt-get -y install numactl + apt-get -y install libnuma-dev + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test diff --git a/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 b/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 new file mode 100644 index 0000000000000000000000000000000000000000..0267b9247f880304095510e8c9730c235750fad5 --- /dev/null +++ b/definition-files/ubuntu/Singularity.ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1-openmpi-3.1.4 @@ -0,0 +1,96 @@ +Bootstrap: oras +From: ghcr.io/mkandes/naked-singularity:ubuntu-18.04-mlnx-ofed-4.6-1.0.1.1 + +%labels + + APPLICATION_NAME ubuntu + mlnx-ofed + openmpi + APPLICATION_VERSION 18.04 + 4.6-1.0.1.1 + 3.1.4 + APPLICATION_URL https://www.open-mpi.org + + AUTHOR_NAME Marty Kandes + AUTHOR_EMAIL mkandes@sdsc.edu + + LAST_UPDATED 20210909 + +%setup + +%environment + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + # Set paths to OpenMPI binaries and libraries + export PATH="${OMPI_INSTALL_DIR}/bin:${PATH}" + export LD_LIBRARY_PATH="${OMPI_INSTALL_DIR}/lib:${LD_LIBRARY_PATH}" + +%post -c /bin/bash + + # Set operating system mirror URL + export MIRRORURL='http://us.archive.ubuntu.com/ubuntu' + + # Set operating system version + export OSVERSION='bionic' + + # Set system locale + export LC_ALL='C' + + # Set debian frontend interface + export DEBIAN_FRONTEND='noninteractive' + + # Upgrade all software packages to their latest versions + apt-get -y update && apt-get -y upgrade + + # Install OpenMPI dependencies + apt-get -y install zlib1g-dev + + # Set OpenMPI major, minor, and revision numbers, root and + # installation directories + export OMPI_ROOT_URL='https://download.open-mpi.org/release/open-mpi' + export OMPI_MAJOR='3' + export OMPI_MINOR='1' + export OMPI_REVISION='4' + export OMPI_VERSION="${OMPI_MAJOR}.${OMPI_MINOR}.${OMPI_REVISION}" + export OMPI_ROOT_DIR='/opt/openmpi' + export OMPI_INSTALL_DIR="${OMPI_ROOT_DIR}/${OMPI_VERSION}" + + cd /tmp + + # Download, build, and install OpenMPI + wget "${OMPI_ROOT_URL}/v${OMPI_MAJOR}.${OMPI_MINOR}/openmpi-${OMPI_VERSION}.tar.gz" + tar -xf "openmpi-${OMPI_VERSION}.tar.gz" + cd "openmpi-${OMPI_VERSION}" + ./configure --prefix="${OMPI_INSTALL_DIR}" --enable-shared \ + --disable-silent-rules --disable-builtin-atomics --enable-static \ + --without-hcoll --without-psm --without-knem --without-psm2 \ + --with-verbs=/usr --without-ofi --without-mxm --without-fca \ + --without-xpmem --without-ucx --without-cma --without-slurm \ + --without-tm --without-loadleveler --without-alps --without-lsf \ + --without-sge --disable-memchecker --disable-java \ + --disable-mpi-java --without-cuda --enable-mpi-cxx \ + --enable-cxx-exceptions + make all install + + cd /tmp + + # Remove OpenMPI build directory and source tarball + rm -rf "openmpi-${OMPI_VERSION}" + rm "openmpi-${OMPI_VERSION}.tar.gz" + + # Cleanup + apt-get -y autoremove --purge + apt-get -y clean + + # Update database for mlocate + updatedb + +%files + +%runscript + +%test