From 235ba32b9bcc8e660afb36ccfe6353f93f277d97 Mon Sep 17 00:00:00 2001
From: Michael Blaschek <michael.blaschek@univie.ac.at>
Date: Wed, 6 Sep 2023 15:15:21 +0000
Subject: [PATCH] Update .gitlab-ci.yml file
---
.gitlab-ci.yml | 36 +++++++++---------------------------
1 file changed, 9 insertions(+), 27 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index d7bfb4f..8f8f9b8 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1,36 +1,18 @@
image:
- name: quay.io/singularity/singularity:v3.7.3
+ name: quay.io/singularity/singularity:v3.11.4-slim
entrypoint: ["/bin/sh", "-c"]
+variables:
+ sfile: definition-files/almalinux/Singularity.base
+ libarypath: almalinux:8-base
+
build:
when: manual
script:
- - /bin/bash .gitlabci/build.sh definition-files/almalinux/Singularity.base
# step 1. build the container!
- # You can add any other sregistry push commands here, and specify a client
- # (and make sure your define the encrypted environment credentials in gitlab
- # to push to your storage locations of choice
-
- - mkdir -p build && cp *.sif build
- #- mkdir -p build && cp Singularity* build
-
- # Step 2. Take a look at "artifacts" below and add the paths you want added
- # You can also add the entire build folder. You can also upload to storage
- # clients defined by sregistry, here are some examples
- # https://singularityhub.github.io/sregistry-cli/clients
- # Environment variables must be defined in CI encrypted secrets/settings
- # https://code.stanford.edu/help/ci/variables/README#variables).
- #- /bin/bash build.sh --uri collection/container --cli google-storage Singularity
- #- /bin/bash build.sh --uri collection/container --cli google-drive Singularity
- #- /bin/bash build.sh --uri collection/container --cli globus Singularity
- #- /bin/bash build.sh --uri collection/container --cli registry Singularity
-
- # This is where you can save job artifacts
- # https://docs.gitlab.com/ee/user/project/pipelines/job_artifacts.html
- # You can specify the path to containers or the build folder to save.
- # Don't forget to save your recipes too!
+ - /bin/bash .gitlabci/build.sh $sfile
+ # step 2. push to harbor
+ - singularity push ${sfile}.sif oras://harbor.wolke.img.univie.ac.at/apptainer/${librarypath}
artifacts:
paths:
- - build/Singularity.sif
- - build/Singularity
-
+ - ${sfile}.sif
--
GitLab