From 3e5726b31af9d1b970ec302d55785d1684a95457 Mon Sep 17 00:00:00 2001
From: Michael Blaschek <michael.blaschek@univie.ac.at>
Date: Tue, 24 Nov 2020 16:06:23 +0100
Subject: [PATCH] Upload New File
---
Python/QA-002-Modules-loaded-Kernel.ipynb | 141 ++++++++++++++++++++++
1 file changed, 141 insertions(+)
create mode 100644 Python/QA-002-Modules-loaded-Kernel.ipynb
diff --git a/Python/QA-002-Modules-loaded-Kernel.ipynb b/Python/QA-002-Modules-loaded-Kernel.ipynb
new file mode 100644
index 0000000..f80b8f8
--- /dev/null
+++ b/Python/QA-002-Modules-loaded-Kernel.ipynb
@@ -0,0 +1,141 @@
+{
+ "cells": [
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "# Loading Modules into the Kernel (Notebook) environment"
+ ]
+ },
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "### Check what modules are currently loaded in this Notebook session"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 1,
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "Currently Loaded Modulefiles:\n",
+ " 1) miniconda3/4.8.2-gcc-8.3.1-3m7b6t2 \n"
+ ]
+ }
+ ],
+ "source": [
+ "!module list --no-pager"
+ ]
+ },
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "Put this file `load_modules_into_jupyter.conf` into your Home directory and your Notebook environment will have these modules loaded.\n",
+ "It is not possible to load these modules via magic (python magic ;).\n",
+ "\n",
+ "\n",
+ "**It needs the empty line at the end...**"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 2,
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "Writing /jetfs/home/mblaschek/load_modules_into_jupyter.conf\n"
+ ]
+ }
+ ],
+ "source": [
+ "%%writefile ~/load_modules_into_jupyter.conf\n",
+ "eccodes/2.18.0-gcc-8.3.1-s7clum3\n"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 3,
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "eccodes/2.18.0-gcc-8.3.1-s7clum3\n"
+ ]
+ }
+ ],
+ "source": [
+ "!cat ~/load_modules_into_jupyter.conf"
+ ]
+ },
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "### Restart the kernel and you should see that the module is loaded"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": 1,
+ "metadata": {},
+ "outputs": [
+ {
+ "name": "stdout",
+ "output_type": "stream",
+ "text": [
+ "Currently Loaded Modulefiles:\n",
+ " 1) miniconda3/4.8.2-gcc-8.3.1-3m7b6t2 \n",
+ " 2) zlib/1.2.11-gcc-8.3.1-bbbpnzp \n",
+ " 3) openmpi/4.0.5-gcc-8.3.1-773ztsv \n",
+ " 4) hdf5/1.12.0-gcc-8.3.1-awl4atl \n",
+ " 5) parallel-netcdf/1.12.1-gcc-8.3.1-xxrhtxn \n",
+ " 6) netcdf-c/4.7.4-gcc-8.3.1-fh4nn6k \n",
+ " 7) eccodes/2.18.0-gcc-8.3.1-s7clum3 \n"
+ ]
+ }
+ ],
+ "source": [
+ "!module list --no-pager"
+ ]
+ },
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "### Now all the dependencies are loaded as well"
+ ]
+ }
+ ],
+ "metadata": {
+ "kernelspec": {
+ "display_name": "Miniconda3 (4.8.2)",
+ "language": "python",
+ "name": "python3"
+ },
+ "language_info": {
+ "codemirror_mode": {
+ "name": "ipython",
+ "version": 3
+ },
+ "file_extension": ".py",
+ "mimetype": "text/x-python",
+ "name": "python",
+ "nbconvert_exporter": "python",
+ "pygments_lexer": "ipython3",
+ "version": "3.8.1"
+ }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 4
+}
--
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