diff --git a/.docker/dist.tar.gz b/.docker/dist.tar.gz
deleted file mode 100644
index 1cfc5411b1b8082ebb9fa45c9f8af3bc1504671d..0000000000000000000000000000000000000000
Binary files a/.docker/dist.tar.gz and /dev/null differ
diff --git a/.docker/docker-compose.yml b/.docker/docker-compose.yml
index 8c01cf618d18d247c66875257579e9088413ac16..c0c8cf091311910c28fba797fefa4ba31b83d52d 100644
--- a/.docker/docker-compose.yml
+++ b/.docker/docker-compose.yml
@@ -309,6 +309,8 @@ services:
condition: service_healthy
dbrepo-broker-service:
condition: service_healthy
+ dbrepo-dashboard-service:
+ condition: service_healthy
dbrepo-metadata-service:
condition: service_healthy
dbrepo-search-db:
@@ -363,7 +365,7 @@ services:
container_name: dbrepo-storage-service
hostname: storage-service
image: docker.io/chrislusf/seaweedfs:3.59
- command: [ "server", "-dir=/data", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9091" ]
+ command: [ "server", "-dir=/data", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9090" ]
volumes:
- ./config/s3_config.json:/app/s3_config.json
- storage-service-data:/data
@@ -377,6 +379,49 @@ services:
logging:
driver: json-file
+ dbrepo-metric-db:
+ restart: "no"
+ container_name: dbrepo-metric-db
+ hostname: metric-db
+ image: bitnami/prometheus:2.54.1-debian-12-r4
+ volumes:
+ - ./config/prometheus.yml:/etc/prometheus/prometheus.yml
+ healthcheck:
+ test: promtool check healthy
+ interval: 10s
+ timeout: 5s
+ retries: 12
+ logging:
+ driver: json-file
+
+ dbrepo-dashboard-service:
+ restart: "no"
+ container_name: dbrepo-dashboard-service
+ hostname: dashboard-service
+ image: docker.io/bitnami/grafana:11.2.0-debian-12-r4
+ volumes:
+ - ./config/dashboards:/app/dashboards
+ - ./config/provisioning:/etc/grafana/provisioning
+ - ./config/grafana.ini:/etc/grafana/grafana.ini
+ - ./config/ldap.toml:/etc/grafana/ldap.toml
+ environment:
+ GF_SERVER_DOMAIN: "dashboard-service"
+ GF_SERVER_ROOT_URL: "${BASE_URL:-http://localhost}/dashboard/"
+ GF_SECURITY_DISABLE_INITIAL_ADMIN_CREATION: "true"
+ LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
+ LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
+ LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
+ healthcheck:
+ test: test -f /opt/bitnami/grafana/tmp/grafana.pid
+ interval: 10s
+ timeout: 5s
+ retries: 12
+ depends_on:
+ dbrepo-metric-db:
+ condition: service_started
+ logging:
+ driver: json-file
+
dbrepo-storage-service-init:
restart: "no"
container_name: dbrepo-storage-service-init
diff --git a/.docs/api/dashboard-service.md b/.docs/api/dashboard-service.md
new file mode 100644
index 0000000000000000000000000000000000000000..2f4529e2adfbd2185c271ccacda7f6fa20887e6e
--- /dev/null
+++ b/.docs/api/dashboard-service.md
@@ -0,0 +1,45 @@
+---
+author: Martin Weise
+---
+
+## tl;dr
+
+!!! debug "Debug Information"
+
+ Image: [`docker.io/bitnami/grafana:11.2.0-debian-12-r4`](https://hub.docker.com/r/bitnami/grafana)
+
+ * Ports: `http://<hostname>/dashboard`
+ * Prometheus: `http://<hostname>/dashboard/prometheus`
+
+## Overview
+
+The Dashboard Service is visualizing the status of DBRepo with charts. The default dashboard provisioner located in
+`/etc/grafana/provisioning/dashboards/provider.yaml` checks for new `JSON` dashboard files in `/app/dashboards` every 10
+seconds and makes the available in the Dashboard Service.
+
+<figure markdown>
+
+<figcaption>Figure 1: DBRepo Dashboard</figcaption>
+</figure>
+
+<figure markdown>
+
+<figcaption>Figure 2: Database Dashboard</figcaption>
+</figure>
+
+<figure markdown>
+
+<figcaption>Figure 3: Broker Service Dashboard</figcaption>
+</figure>
+
+## Limitations
+
+!!! question "Do you miss functionality? Do these limitations affect you?"
+
+ We strongly encourage you to help us implement it as we are welcoming contributors to open-source software and get
+ in [contact](../../contact) with us, we happily answer requests for collaboration with attached CV and your programming
+ experience!
+
+## Security
+
+(none)
diff --git a/.docs/api/metric-db.md b/.docs/api/metric-db.md
new file mode 100644
index 0000000000000000000000000000000000000000..1601e89397fd1ede29026dc88ec670f0b9efee09
--- /dev/null
+++ b/.docs/api/metric-db.md
@@ -0,0 +1,25 @@
+---
+author: Martin Weise
+---
+
+## tl;dr
+
+!!! debug "Debug Information"
+
+ Image: [`bitnami/prometheus:2.54.1-debian-12-r4`](https://hub.docker.com/r/bitnami/prometheus)
+
+## Overview
+
+The Metric Database is responsible for saving time-series data for the [Dashboard Service](../../api/dashboard-service)
+
+## Limitations
+
+!!! question "Do you miss functionality? Do these limitations affect you?"
+
+ We strongly encourage you to help us implement it as we are welcoming contributors to open-source software and get
+ in [contact](../../contact) with us, we happily answer requests for collaboration with attached CV and your programming
+ experience!
+
+## Security
+
+(none)
diff --git a/.docs/concepts/databases.md b/.docs/concepts/database.md
similarity index 100%
rename from .docs/concepts/databases.md
rename to .docs/concepts/database.md
diff --git a/.docs/concepts/monitoring.md b/.docs/concepts/monitoring.md
index 10a1b331eb895d73368c17bd87e6d96340bcf011..a00c99179b3cb702f66df729eabf49880c805184 100644
--- a/.docs/concepts/monitoring.md
+++ b/.docs/concepts/monitoring.md
@@ -63,65 +63,70 @@ The [Data Database Sidecar](#) metrics are:
## Metadata Service
-| **Metric** | **Description** |
-|------------------------------------|-----------------------------------|
-| `dbrepo_user_refresh_token` | Refresh user token |
-| `dbrepo_identifier_save` | Save identifier |
-| `dbrepo_oai_record_get` | Get the record |
-| `dbrepo_access_give` | Give access to some database |
-| `dbrepo_ontologies_find` | Find one ontology |
-| `dbrepo_database_findall` | List databases |
-| `dbrepo_tables_refresh` | Refresh database tables metadata |
-| `dbrepo_license_findall` | Get all licenses |
-| `dbrepo_user_modify` | Modify user information |
-| `dbrepo_container_findall` | Find all containers |
-| `dbrepo_maintenance_delete` | Delete maintenance message |
-| `dbrepo_maintenance_update` | Update maintenance message |
-| `dbrepo_ontologies_create` | Register a new ontology |
-| `dbrepo_identifier_delete` | Delete some identifier |
-| `dbrepo_oai_identify` | Identify the repository |
-| `dbrepo_database_create` | Create database |
-| `dbrepo_oai_metadataformats_list` | List the metadata formats |
-| `dbrepo_user_password_modify` | Modify user password |
-| `dbrepo_semantic_concepts_findall` | List semantic concepts |
-| `dbrepo_identifier_retrieve` | Retrieve metadata from identifier |
-| `dbrepo_identifier_list` | Find all identifiers |
-| `dbrepo_views_findall` | Find all views |
-| `dbrepo_identifier_create` | Draft identifier |
-| `dbrepo_oai_identifiers_list` | List the identifiers |
-| `dbrepo_image_findall` | Find all images |
-| `dbrepo_database_visibility` | Update database visibility |
-| `dbrepo_container_create` | Create container |
-| `dbrepo_views_refresh` | Refresh database views metadata |
-| `dbrepo_database_find` | Find some database |
-| `dbrepo_access_get` | Check access to some database |
-| `dbrepo_identifier_find` | Find some identifier |
-| `dbrepo_maintenance_create` | Create maintenance message |
-| `dbrepo_container_delete` | Delete some container |
-| `dbrepo_ontologies_delete` | Delete an ontology |
-| `dbrepo_ontologies_findall` | List all ontologies |
-| `dbrepo_user_token` | Obtain user token |
-| `dbrepo_view_find` | Find one view |
-| `dbrepo_user_create` | Create user |
-| `dbrepo_ontologies_update` | Update an ontology |
-| `dbrepo_maintenance_findall` | Find maintenance messages |
-| `dbrepo_users_list` | Find all users |
-| `dbrepo_image_find` | Find some image |
-| `dbrepo_user_find` | Get a user info |
-| `dbrepo_image_delete` | Delete some image |
-| `dbrepo_identifier_publish` | Publish identifier |
-| `dbrepo_image_update` | Update some image |
-| `dbrepo_view_create` | Create a view |
-| `dbrepo_semantic_units_findall` | List semantic units |
-| `dbrepo_image_create` | Create image |
-| `dbrepo_database_image` | Update database image |
-| `dbrepo_view_delete` | Delete one view |
-| `dbrepo_database_transfer` | Update database owner |
-| `dbrepo_maintenance_find` | Find one maintenance message |
-| `dbrepo_access_modify` | Modify access to some database |
-| `dbrepo_ontologies_entities_find` | Find entities |
-| `dbrepo_access_delete` | Revoke access to some database |
-| `dbrepo_container_find` | Find some container |
+| **Metric** | **Description** |
+|------------------------------------|---------------------------------------------------|
+| `dbrepo_database_count` | The total number of managed research databases |
+| `dbrepo_view_count` | The total number of available view data sources |
+| `dbrepo_subset_count` | The total number of available subset data sources |
+| `dbrepo_table_count` | The total number of available table data sources |
+| `dbrepo_volume_sum` | The total volume of available research data |
+| `dbrepo_user_refresh_token` | Refresh user token |
+| `dbrepo_identifier_save` | Save identifier |
+| `dbrepo_oai_record_get` | Get the record |
+| `dbrepo_access_give` | Give access to some database |
+| `dbrepo_ontologies_find` | Find one ontology |
+| `dbrepo_database_findall` | List databases |
+| `dbrepo_tables_refresh` | Refresh database tables metadata |
+| `dbrepo_license_findall` | Get all licenses |
+| `dbrepo_user_modify` | Modify user information |
+| `dbrepo_container_findall` | Find all containers |
+| `dbrepo_maintenance_delete` | Delete maintenance message |
+| `dbrepo_maintenance_update` | Update maintenance message |
+| `dbrepo_ontologies_create` | Register a new ontology |
+| `dbrepo_identifier_delete` | Delete some identifier |
+| `dbrepo_oai_identify` | Identify the repository |
+| `dbrepo_database_create` | Create database |
+| `dbrepo_oai_metadataformats_list` | List the metadata formats |
+| `dbrepo_user_password_modify` | Modify user password |
+| `dbrepo_semantic_concepts_findall` | List semantic concepts |
+| `dbrepo_identifier_retrieve` | Retrieve metadata from identifier |
+| `dbrepo_identifier_list` | Find all identifiers |
+| `dbrepo_views_findall` | Find all views |
+| `dbrepo_identifier_create` | Draft identifier |
+| `dbrepo_oai_identifiers_list` | List the identifiers |
+| `dbrepo_image_findall` | Find all images |
+| `dbrepo_database_visibility` | Update database visibility |
+| `dbrepo_container_create` | Create container |
+| `dbrepo_views_refresh` | Refresh database views metadata |
+| `dbrepo_database_find` | Find some database |
+| `dbrepo_access_get` | Check access to some database |
+| `dbrepo_identifier_find` | Find some identifier |
+| `dbrepo_maintenance_create` | Create maintenance message |
+| `dbrepo_container_delete` | Delete some container |
+| `dbrepo_ontologies_delete` | Delete an ontology |
+| `dbrepo_ontologies_findall` | List all ontologies |
+| `dbrepo_user_token` | Obtain user token |
+| `dbrepo_view_find` | Find one view |
+| `dbrepo_user_create` | Create user |
+| `dbrepo_ontologies_update` | Update an ontology |
+| `dbrepo_maintenance_findall` | Find maintenance messages |
+| `dbrepo_users_list` | Find all users |
+| `dbrepo_image_find` | Find some image |
+| `dbrepo_user_find` | Get a user info |
+| `dbrepo_image_delete` | Delete some image |
+| `dbrepo_identifier_publish` | Publish identifier |
+| `dbrepo_image_update` | Update some image |
+| `dbrepo_view_create` | Create a view |
+| `dbrepo_semantic_units_findall` | List semantic units |
+| `dbrepo_image_create` | Create image |
+| `dbrepo_database_image` | Update database image |
+| `dbrepo_view_delete` | Delete one view |
+| `dbrepo_database_transfer` | Update database owner |
+| `dbrepo_maintenance_find` | Find one maintenance message |
+| `dbrepo_access_modify` | Modify access to some database |
+| `dbrepo_ontologies_entities_find` | Find entities |
+| `dbrepo_access_delete` | Revoke access to some database |
+| `dbrepo_container_find` | Find some container |
## Search Service
diff --git a/.docs/images/screenshots/grafana3.png b/.docs/images/screenshots/grafana3.png
new file mode 100644
index 0000000000000000000000000000000000000000..f56be5d816a9c9a52046350f16a616adcf491596
Binary files /dev/null and b/.docs/images/screenshots/grafana3.png differ
diff --git a/.docs/images/screenshots/grafana4.png b/.docs/images/screenshots/grafana4.png
new file mode 100644
index 0000000000000000000000000000000000000000..94cdf5f9ed79356cade533add69aafa426df3e45
Binary files /dev/null and b/.docs/images/screenshots/grafana4.png differ
diff --git a/.docs/images/screenshots/grafana5.png b/.docs/images/screenshots/grafana5.png
new file mode 100644
index 0000000000000000000000000000000000000000..36aae6b4ffc09808773d3705afd36815623d0161
Binary files /dev/null and b/.docs/images/screenshots/grafana5.png differ
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 5d4d611ea76255f0cc7613dcdb0174c81b534ede..4fe2c739a640b791a8d11019144a6db9df598048 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -156,6 +156,39 @@ build-helm:
- apk add sed helm curl
- helm package ./helm/dbrepo --destination ./build
+lint-docker-compose:
+ image: docker.io/alpine:3.18
+ stage: lint
+ variables:
+ VERSION: 3.3.0
+ BINARY: yq_linux_amd64
+ before_script:
+ - 'apk --no-cache add bash wget'
+ - 'wget https://github.com/mikefarah/yq/releases/download/${VERSION}/${BINARY} -O /usr/bin/yq && chmod +x /usr/bin/yq'
+ - 'ls -la .scripts'
+ script:
+ - "yq compare -P docker-compose.yml .docker/docker-compose.yml 'volumes.*'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-analyse-service'"
+ - "bash .scripts/check-service.sh 'dbrepo-auth-db'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-auth-service'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-broker-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-dashboard-service'"
+ - "bash .scripts/check-service.sh 'dbrepo-data-db'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-data-db-sidecar'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-data-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-gateway-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-identity-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-metadata-db'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-metadata-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-metric-db'"
+ - "IGNORE_IMAGE=1 bash .scripts/check-service.sh 'dbrepo-search-db'"
+ - "IGNORE_IMAGE=1 IGNORE_PORTS=1 bash .scripts/check-service.sh 'dbrepo-search-service'"
+ - "IGNORE_IMAGE=1 bash .scripts/check-service.sh 'dbrepo-search-service-init'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-storage-service'"
+ - "IGNORE_VOLUMES=1 bash .scripts/check-service.sh 'dbrepo-storage-service-init'"
+ - "IGNORE_IMAGE=1 bash .scripts/check-service.sh 'dbrepo-ui'"
+ - "bash .scripts/check-service.sh 'dbrepo-upload-service'"
+
verify-install-script:
image: docker.io/docker:24-dind
stage: verify
@@ -401,12 +434,13 @@ release-docs:
- "pip install -r ./requirements.txt"
- "mkdir -p ./final/${APP_VERSION}/rest"
script:
- - "make gen-lib-doc gen-docs-doc"
+ - "make gen-lib-doc gen-docs-doc package-config"
- "cp -r ./lib/python/docs/build/html ./final/${APP_VERSION}/python" # sphinx
- "cp .docs/.swagger/api.yaml ./final/${APP_VERSION}/rest/api.yaml" # swagger
- "cp .docs/.swagger/swagger-ui.html ./final/${APP_VERSION}/rest/index.html" # swagger
- "cp .docs/.swagger/custom.css ./final/${APP_VERSION}/rest/custom.css" # swagger
- "cp -r ./site/* ./final/${APP_VERSION}" # mkdocs
+ - "cp .docker/dist.tar.gz ./final/${APP_VERSION}/dist.tar.gz" # dist
- eval $(ssh-agent -s)
- "mkdir -p /root/.ssh"
- echo "$CI_KEY_PRIVATE" > /root/.ssh/id_rsa && chmod 0600 /root/.ssh/id_rsa
diff --git a/.scripts/check-service.sh b/.scripts/check-service.sh
new file mode 100755
index 0000000000000000000000000000000000000000..decc22312b8a44049d4675cc36a5be3e6aafe072
--- /dev/null
+++ b/.scripts/check-service.sh
@@ -0,0 +1,16 @@
+#!/bin/bash
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.restart"
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.container_name"
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.hostname"
+if [ -z "$IGNORE_IMAGE" ]; then
+ yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.image"
+fi
+if [ -z "$IGNORE_VOLUMES" ]; then
+ yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.volumes"
+fi
+if [ -z "$IGNORE_PORTS" ]; then
+ yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.ports"
+fi
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.environment"
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.healthcheck"
+yq compare -P docker-compose.yml .docker/docker-compose.yml "services.$1.logging"
\ No newline at end of file
diff --git a/Makefile b/Makefile
index 027fac1b00fb33b0d94f4e3b3b90f241d792dba9..8c85acc01e6ab33dcd88b13e9229ae85e9b48b75 100644
--- a/Makefile
+++ b/Makefile
@@ -16,7 +16,6 @@ version: ## Get current version.
@echo $(APP_VERSION)
include make/build.mk
-include make/dep.mk
include make/dev.mk
include make/gen.mk
include make/rel.mk
diff --git a/dbrepo-auth-service/docker-entrypoint.sh b/dbrepo-auth-service/docker-entrypoint.sh
index b7eb09b2829423e01d3d61f7310fc98f31b28d01..9ebd2bd240c1f44303f06d7cb00dfbdf7c2a1540 100644
--- a/dbrepo-auth-service/docker-entrypoint.sh
+++ b/dbrepo-auth-service/docker-entrypoint.sh
@@ -1,3 +1,3 @@
#!/bin/bash
bash /app/disable-tls.sh &
-/opt/keycloak/bin/kc.sh start-dev --import-realm
+/opt/keycloak/bin/kc.sh start-dev --import-realm --metrics-enabled=true
diff --git a/dbrepo-dashboard-service/Dockerfile b/dbrepo-dashboard-service/Dockerfile
new file mode 100644
index 0000000000000000000000000000000000000000..374e72e41d31f17e6df2ace7dd57eed925fd14ab
--- /dev/null
+++ b/dbrepo-dashboard-service/Dockerfile
@@ -0,0 +1,9 @@
+FROM docker.io/bitnami/grafana:11.2.0-debian-12-r4 AS runtime
+LABEL org.opencontainers.image.authors="martin.weise@tuwien.ac.at"
+
+WORKDIR /app
+
+COPY ./grafana.ini /etc/grafana/grafana.ini
+COPY ldap.toml /etc/grafana/ldap.toml
+COPY provisioning/datasources/prometheus.yaml /etc/grafana/provisioning/datasources/datasource.yaml
+#COPY --chown=999:999 ./system.yaml /var/lib/grafana/dashboards/system.yaml
diff --git a/dbrepo-dashboard-service/dashboards/rabbitmq.json b/dbrepo-dashboard-service/dashboards/rabbitmq.json
new file mode 100644
index 0000000000000000000000000000000000000000..a8db65695f2dfef0484ebd91fcb7401f31f9f70d
--- /dev/null
+++ b/dbrepo-dashboard-service/dashboards/rabbitmq.json
@@ -0,0 +1,8165 @@
+{
+ "annotations": {
+ "list": [
+ {
+ "builtIn": 1,
+ "datasource": "-- Grafana --",
+ "enable": true,
+ "hide": true,
+ "iconColor": "rgba(0, 211, 255, 1)",
+ "name": "Annotations & Alerts",
+ "target": {
+ "limit": 100,
+ "matchAny": false,
+ "tags": [],
+ "type": "dashboard"
+ },
+ "type": "dashboard"
+ }
+ ]
+ },
+ "description": "A new RabbitMQ Management Overview",
+ "editable": true,
+ "fiscalYearStartMonth": 0,
+ "graphTooltip": 1,
+ "id": null,
+ "iteration": 1659711638455,
+ "links": [
+ {
+ "icon": "doc",
+ "tags": [],
+ "targetBlank": true,
+ "title": "Monitoring with Prometheus & Grafana",
+ "tooltip": "",
+ "type": "link",
+ "url": "https://www.rabbitmq.com/prometheus.html"
+ }
+ ],
+ "liveNow": false,
+ "panels": [
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "description": "",
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "thresholds"
+ },
+ "mappings": [
+ {
+ "options": {
+ "match": "null",
+ "result": {
+ "text": "N/A"
+ }
+ },
+ "type": "special"
+ }
+ ],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "#37872D",
+ "value": null
+ },
+ {
+ "color": "#1F60C4",
+ "value": 10000
+ },
+ {
+ "color": "#C4162A",
+ "value": 100000
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": []
+ },
+ "id": 64,
+ "links": [],
+ "maxDataPoints": 100,
+ "options": {
+ "colorMode": "background",
+ "graphMode": "area",
+ "justifyMode": "auto",
+ "orientation": "horizontal",
+ "reduceOptions": {
+ "calcs": [
+ "lastNotNull"
+ ],
+ "fields": "",
+ "values": false
+ },
+ "textMode": "auto"
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
+ {
+ "expr": "sum(rabbitmq_queue_messages_ready * on(instance, job) group_left(rabbitmq_cluster) rabbitmq_identity_info{rabbitmq_cluster=\"$rabbitmq_cluster\", namespace=\"$namespace\"})",
+ "format": "time_series",
+ "hide": false,
+ "instant": false,
+ "interval": "",
+ "intervalFactor": 1,
+ "legendFormat": "",
+ "refId": "A"
+ }
+ ],
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+ "legendFormat": "{{rabbitmq_node}}",
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+ "max",
+ "min"
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+ "displayMode": "hidden",
+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
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+ "format": "time_series",
+ "instant": false,
+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Messages pending consumer acknowledgement",
+ "type": "timeseries"
+ },
+ {
+ "collapsed": false,
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "gridPos": {
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+ "w": 24,
+ "x": 0,
+ "y": 25
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+ "id": 11,
+ "panels": [],
+ "title": "INCOMING MESSAGES",
+ "type": "row"
+ },
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The incoming message rate before any routing rules are applied.\n\nIf this value is lower than the number of messages published to queues, it may indicate that some messages are delivered to more than one queue.\n\nIf this value is higher than the number of messages published to queues, messages cannot be routed and will either be dropped or returned to publishers.\n\n* [Publishers](https://www.rabbitmq.com/publishers.html)",
+ "fieldConfig": {
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+ "stacking": {
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+ "thresholdsStyle": {
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+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
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+ "instant": false,
+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Messages published / s",
+ "type": "timeseries"
+ },
+ {
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+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The rate of messages confirmed by the broker to publishers. Publishers must opt-in to receive message confirmations.\n\nIf this metric is consistently at zero it may suggest that publisher confirms are not used by clients. The safety of published messages is likely to be at risk.\n\n* [Publisher Confirms](https://www.rabbitmq.com/confirms.html#publisher-confirms)\n* [Publisher Confirms and Data Safety](https://www.rabbitmq.com/publishers.html#data-safety)\n* [When Will Published Messages Be Confirmed by the Broker?](https://www.rabbitmq.com/confirms.html#when-publishes-are-confirmed)",
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+ "name": "namespace",
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+ "type": "query",
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+ "datasource": {
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+ "uid": "${DS_PROMETHEUS}"
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+ "hide": 0,
+ "includeAll": false,
+ "label": "RabbitMQ Cluster",
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+ "name": "rabbitmq_cluster",
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+ "refId": "Prometheus-rabbitmq_cluster-Variable-Query"
+ },
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+ "regex": "",
+ "skipUrlSync": false,
+ "sort": 1,
+ "tagValuesQuery": "",
+ "tagsQuery": "",
+ "type": "query",
+ "useTags": false
+ }
+ ]
+ },
+ "time": {
+ "from": "now-15m",
+ "to": "now"
+ },
+ "timepicker": {
+ "refresh_intervals": [
+ "15s",
+ "30s",
+ "1m",
+ "5m",
+ "10m"
+ ],
+ "time_options": [
+ "5m",
+ "15m",
+ "1h",
+ "6h",
+ "12h",
+ "24h",
+ "2d",
+ "7d",
+ "30d"
+ ]
+ },
+ "timezone": "",
+ "title": "RabbitMQ - Overview",
+ "uid": "Kn5xm-gZk",
+ "version": 20220805,
+ "weekStart": "",
+ "gnetId": 10991
+}
\ No newline at end of file
diff --git a/dbrepo-dashboard-service/dashboards/system.json b/dbrepo-dashboard-service/dashboards/system.json
new file mode 100644
index 0000000000000000000000000000000000000000..75287d5a0353df5aa77f82ee361888fe00274ef8
--- /dev/null
+++ b/dbrepo-dashboard-service/dashboards/system.json
@@ -0,0 +1,1215 @@
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+ "expr": "dbrepo_database_count",
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+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "semi-dark-purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "ui:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "super-light-purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 9
+ },
+ "id": 1,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "up",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
+ ],
+ "title": "Service Instances Running",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 25,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "smooth",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "auto",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 80
+ }
+ ]
+ }
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "data-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 15
+ },
+ "id": 6,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "multi",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "process_cpu_usage",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "Java",
+ "useBackend": false
+ }
+ ],
+ "title": "CPU Usage",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "description": "Heap and non-heap memory summed",
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 25,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "linear",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "auto",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ }
+ ]
+ },
+ "unit": "decbytes"
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "data-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 21
+ },
+ "id": 7,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "sum by(instance) (jvm_memory_used_bytes)",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": false,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
+ ],
+ "title": "JVM Memory Usage",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 10,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "smooth",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "never",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "none"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "links": [],
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 80
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "400"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "orange",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "500"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#BF1B00",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "-1"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "200"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "green",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "302"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "light-yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "304"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "super-light-yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "401"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "light-orange",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "499"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "red",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 27
+ },
+ "id": 13,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "8.1.0-pre",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "editorMode": "code",
+ "expr": "sum by (status_code) (irate(grafana_http_request_duration_seconds_count[5m]))",
+ "format": "time_series",
+ "intervalFactor": 3,
+ "legendFormat": "{{status_code}}",
+ "range": true,
+ "refId": "B",
+ "step": 15,
+ "target": "dev.grafana.cb-office.alerting.active_alerts"
+ }
+ ],
+ "title": "Dashboard Service HTTP Status Codes",
+ "type": "timeseries"
+ }
+ ],
+ "refresh": "10s",
+ "schemaVersion": 39,
+ "tags": ["provisioned", "dbrepo"],
+ "templating": {
+ "list": []
+ },
+ "time": {
+ "from": "now-15m",
+ "to": "now"
+ },
+ "timepicker": {},
+ "timezone": "browser",
+ "title": "DBRepo - Overview",
+ "uid": "bdz20owu8zn5se",
+ "version": 1,
+ "weekStart": ""
+}
\ No newline at end of file
diff --git a/dbrepo-dashboard-service/grafana.ini b/dbrepo-dashboard-service/grafana.ini
new file mode 100644
index 0000000000000000000000000000000000000000..cc2f5d41a63f1106d0e6b59bba175c4becb16a73
--- /dev/null
+++ b/dbrepo-dashboard-service/grafana.ini
@@ -0,0 +1,21 @@
+[server]
+http_port = 3000
+
+[security]
+disable_initial_admin_creation = true
+
+[auth.ldap]
+enabled = true
+config_file = /etc/grafana/ldap.toml
+
+[auth.anonymous]
+enabled = true
+org_role = Viewer
+hide_version = true
+
+[dashboards]
+enabled = true
+path = /app/dashboards
+
+#[log]
+#filters = ldap:trace
\ No newline at end of file
diff --git a/dbrepo-dashboard-service/ldap.toml b/dbrepo-dashboard-service/ldap.toml
new file mode 100644
index 0000000000000000000000000000000000000000..452353136104eae051526c536631a10a11352216
--- /dev/null
+++ b/dbrepo-dashboard-service/ldap.toml
@@ -0,0 +1,38 @@
+[[servers]]
+host = "identity-service"
+port = 1389
+use_ssl = false
+
+# Search user bind dn
+bind_dn = "cn=${LDAP_ADMIN_USERNAME},${LDAP_ROOT}"
+bind_password = "${LDAP_ADMIN_PASSWORD}"
+
+# Timeout in seconds. Applies to each host specified in the 'host' entry (space separated).
+timeout = 10
+
+# User search filter, for example "(cn=%s)" or "(sAMAccountName=%s)" or "(uid=%s)"
+# Allow login from email or username, example "(|(sAMAccountName=%s)(userPrincipalName=%s))"
+search_filter = "(cn=%s)"
+
+# An array of base dns to search through
+search_base_dns = ["${LDAP_ROOT}"]
+
+group_search_base_dns = ["ou=users,${LDAP_ROOT}"]
+group_search_filter = "(&(objectClass=groupOfNames)(member=cn=%s,ou=users,${LDAP_ROOT}))"
+group_search_filter_user_attribute = "uid"
+
+[servers.attributes]
+name = "givenName"
+surname = "sn"
+username = "cn"
+member_of = "member"
+email = "email"
+
+[[servers.group_mappings]]
+group_dn = "cn=${LDAP_ADMIN_USERNAME},ou=users,${LDAP_ROOT}"
+org_role = "Admin"
+grafana_admin = true
+
+[[servers.group_mappings]]
+group_dn = "*"
+org_role = "Viewer"
diff --git a/dbrepo-dashboard-service/provisioning/dashboards/provider.yaml b/dbrepo-dashboard-service/provisioning/dashboards/provider.yaml
new file mode 100644
index 0000000000000000000000000000000000000000..f54289797de349a240ede871f4d4402fa89214b3
--- /dev/null
+++ b/dbrepo-dashboard-service/provisioning/dashboards/provider.yaml
@@ -0,0 +1,24 @@
+apiVersion: 1
+
+providers:
+ # <string> an unique provider name. Required
+ - name: 'dbrepo'
+ # <int> Org id. Default to 1
+ orgId: 1
+ # <string> name of the dashboard folder.
+ folder: '/app/dashboards'
+ # <string> folder UID. will be automatically generated if not specified
+ folderUid: ''
+ # <string> provider type. Default to 'file'
+ type: file
+ # <bool> disable dashboard deletion
+ disableDeletion: false
+ # <int> how often Grafana will scan for changed dashboards
+ updateIntervalSeconds: 10
+ # <bool> allow updating provisioned dashboards from the UI
+ allowUiUpdates: false
+ options:
+ # <string, required> path to dashboard files on disk. Required when using the 'file' type
+ path: /app/dashboards
+ # <bool> use folder names from filesystem to create folders in Grafana
+ foldersFromFilesStructure: true
\ No newline at end of file
diff --git a/dbrepo-dashboard-service/provisioning/datasources/prometheus.yaml b/dbrepo-dashboard-service/provisioning/datasources/prometheus.yaml
new file mode 100644
index 0000000000000000000000000000000000000000..a46c561957abfd2093e275f213f29f0db7d3fe5c
--- /dev/null
+++ b/dbrepo-dashboard-service/provisioning/datasources/prometheus.yaml
@@ -0,0 +1,7 @@
+apiVersion: 1
+
+datasources:
+ - name: dbrepo-metric-db
+ type: prometheus
+ uid: P18F45E9DC7E75912
+ url: http://metric-db:9090
diff --git a/dbrepo-data-db/sidecar/Dockerfile b/dbrepo-data-db/sidecar/Dockerfile
index 2dfd2a781a746afdbeadc042b548d0719e4acc07..3f849019a413d0add6166dd70a125a9e37be8730 100644
--- a/dbrepo-data-db/sidecar/Dockerfile
+++ b/dbrepo-data-db/sidecar/Dockerfile
@@ -1,4 +1,5 @@
FROM python:3.11-alpine
+LABEL org.opencontainers.image.authors="martin.weise@tuwien.ac.at"
RUN apk add bash curl jq mariadb-client
diff --git a/dbrepo-data-service/pom.xml b/dbrepo-data-service/pom.xml
index 4495ec2f073ef2a92c014604d3bfee90de6707fb..9aefac5d757bd6e71c164b3f3fdcb8780ba56708 100644
--- a/dbrepo-data-service/pom.xml
+++ b/dbrepo-data-service/pom.xml
@@ -53,6 +53,7 @@
<c3p0-hibernate.version>6.2.2.Final</c3p0-hibernate.version>
<aws-s3.version>2.25.23</aws-s3.version>
<minio.version>8.5.7</minio.version>
+ <guava.version>33.3.0-jre</guava.version>
</properties>
<dependencies>
@@ -86,6 +87,11 @@
<groupId>org.springframework.boot</groupId>
<artifactId>spring-boot-starter-actuator</artifactId>
</dependency>
+ <dependency>
+ <groupId>com.google.guava</groupId>
+ <artifactId>guava</artifactId>
+ <version>${guava.version}</version>
+ </dependency>
<!-- Open API -->
<dependency>
<groupId>org.springdoc</groupId>
diff --git a/dbrepo-data-service/rest-service/src/main/java/at/tuwien/endpoints/SubsetEndpoint.java b/dbrepo-data-service/rest-service/src/main/java/at/tuwien/endpoints/SubsetEndpoint.java
index 507d9f33bd4ad66dba9094b2f6bf4311a761f0b0..87471c74c2e21d45dc86a28e76409e3cb9564906 100644
--- a/dbrepo-data-service/rest-service/src/main/java/at/tuwien/endpoints/SubsetEndpoint.java
+++ b/dbrepo-data-service/rest-service/src/main/java/at/tuwien/endpoints/SubsetEndpoint.java
@@ -146,8 +146,7 @@ public class SubsetEndpoint {
@RequestParam(required = false) Instant timestamp)
throws DatabaseUnavailableException, DatabaseNotFoundException, RemoteUnavailableException,
QueryNotFoundException, FormatNotAvailableException, StorageUnavailableException, QueryMalformedException,
- SidecarExportException, StorageNotFoundException, NotAllowedException, UserNotFoundException,
- MetadataServiceException {
+ SidecarExportException, StorageNotFoundException, UserNotFoundException, MetadataServiceException {
String accept = httpServletRequest.getHeader("Accept");
log.debug("endpoint find subset in database, databaseId={}, subsetId={}, accept={}, timestamp={}", databaseId,
subsetId, accept, timestamp);
diff --git a/dbrepo-data-service/rest-service/src/test/java/at/tuwien/endpoint/SubsetEndpointUnitTest.java b/dbrepo-data-service/rest-service/src/test/java/at/tuwien/endpoint/SubsetEndpointUnitTest.java
index 1c54280a222f294be84bdf5c24b5b8ee4e0e6caf..358a04008f9faeca8daf5b898df238fa5142a14f 100644
--- a/dbrepo-data-service/rest-service/src/test/java/at/tuwien/endpoint/SubsetEndpointUnitTest.java
+++ b/dbrepo-data-service/rest-service/src/test/java/at/tuwien/endpoint/SubsetEndpointUnitTest.java
@@ -88,8 +88,8 @@ public class SubsetEndpointUnitTest extends AbstractUnitTest {
@Test
@WithAnonymousUser
- public void list_unavailable_fails() throws NotAllowedException, SQLException, QueryNotFoundException,
- DatabaseNotFoundException, RemoteUnavailableException, MetadataServiceException {
+ public void list_unavailable_fails() throws SQLException, QueryNotFoundException, DatabaseNotFoundException,
+ RemoteUnavailableException, MetadataServiceException {
/* mock */
when(metadataServiceGateway.getDatabaseById(DATABASE_3_ID))
diff --git a/dbrepo-data-service/services/src/main/java/at/tuwien/mapper/DataMapper.java b/dbrepo-data-service/services/src/main/java/at/tuwien/mapper/DataMapper.java
index b34053ec88a47a1f02ab99048fffc7e7f0cf35dd..b69d06b0aabd9bd76b686e9526a3cad52298c752 100644
--- a/dbrepo-data-service/services/src/main/java/at/tuwien/mapper/DataMapper.java
+++ b/dbrepo-data-service/services/src/main/java/at/tuwien/mapper/DataMapper.java
@@ -26,7 +26,6 @@ import at.tuwien.config.QueryConfig;
import at.tuwien.exception.QueryNotFoundException;
import at.tuwien.exception.TableNotFoundException;
import com.github.dockerjava.zerodep.shaded.org.apache.commons.codec.binary.Hex;
-import com.google.common.hash.Hashing;
import net.sf.jsqlparser.JSQLParserException;
import net.sf.jsqlparser.parser.CCJSqlParserManager;
import net.sf.jsqlparser.schema.Column;
@@ -36,6 +35,7 @@ import org.jetbrains.annotations.NotNull;
import org.mapstruct.Mapper;
import org.mapstruct.Mapping;
import org.mapstruct.Mappings;
+import org.testcontainers.shaded.com.google.common.hash.Hashing;
import org.testcontainers.shaded.org.apache.commons.io.FileUtils;
import java.io.File;
diff --git a/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/SubsetServiceMariaDbImpl.java b/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/SubsetServiceMariaDbImpl.java
index 7ebd403b6903737c07f2197593ab6229851c32e3..e839800fe577f951bf868b44c5d595d96258f7b0 100644
--- a/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/SubsetServiceMariaDbImpl.java
+++ b/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/SubsetServiceMariaDbImpl.java
@@ -19,13 +19,13 @@ import at.tuwien.mapper.MariaDbMapper;
import at.tuwien.mapper.MetadataMapper;
import at.tuwien.service.SubsetService;
import at.tuwien.service.StorageService;
-import com.google.common.hash.Hashing;
import com.mchange.v2.c3p0.ComboPooledDataSource;
import lombok.extern.log4j.Log4j2;
import net.sf.jsqlparser.JSQLParserException;
import org.apache.commons.lang3.RandomUtils;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.stereotype.Service;
+import org.testcontainers.shaded.com.google.common.hash.Hashing;
import java.nio.charset.Charset;
import java.sql.*;
diff --git a/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/TableServiceMariaDbImpl.java b/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/TableServiceMariaDbImpl.java
index 92e35125331236a8fdfb29cf79783b776f3c63bb..15ed27f4414a02680511f914453b8bda9ce98da3 100644
--- a/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/TableServiceMariaDbImpl.java
+++ b/dbrepo-data-service/services/src/main/java/at/tuwien/service/impl/TableServiceMariaDbImpl.java
@@ -30,8 +30,6 @@ import java.sql.*;
import java.time.Instant;
import java.util.*;
-import static org.apache.jena.sparql.util.QueryExecUtils.executeQuery;
-
@Log4j2
@Service
public class TableServiceMariaDbImpl extends HibernateConnector implements TableService {
diff --git a/dbrepo-gateway-service/dbrepo.conf b/dbrepo-gateway-service/dbrepo.conf
index 8ac239d464398ec381b98d71c91192ea6ba061ab..49e5ce649631baf8ffb1945f3cbc1037de099d28 100644
--- a/dbrepo-gateway-service/dbrepo.conf
+++ b/dbrepo-gateway-service/dbrepo.conf
@@ -1,3 +1,9 @@
+# This is required to proxy Grafana Live WebSocket connections.
+map $http_upgrade $connection_upgrade {
+ default upgrade;
+ '' close;
+}
+
client_max_body_size 20G;
resolver 127.0.0.11 valid=30s; # docker dns
@@ -34,6 +40,10 @@ upstream upload {
server upload-service:8080;
}
+upstream dashboard-service {
+ server dashboard-service:3000;
+}
+
server {
listen 80 default_server;
server_name _;
@@ -47,6 +57,26 @@ server {
proxy_read_timeout 90;
}
+ location /dashboard {
+ rewrite ^/dashboard/(.*) /$1 break;
+ proxy_set_header Host $host;
+ proxy_set_header X-Real-IP $remote_addr;
+ proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
+ proxy_set_header X-Forwarded-Proto $scheme;
+ proxy_pass http://dashboard-service;
+ proxy_read_timeout 90;
+ }
+
+ # Proxy Grafana Live WebSocket connections.
+ location /dashboard/api/live {
+ rewrite ^/dashboard/(.*) /$1 break;
+ proxy_http_version 1.1;
+ proxy_set_header Upgrade $http_upgrade;
+ proxy_set_header Connection $connection_upgrade;
+ proxy_set_header Host $host;
+ proxy_pass http://dashboard-service;
+ }
+
location /api/search {
proxy_set_header Host $host;
proxy_set_header X-Real-IP $remote_addr;
diff --git a/dbrepo-metadata-db/1_setup-schema.sql b/dbrepo-metadata-db/1_setup-schema.sql
index 47ee3a95e2b88a62d4a2405f9c0f4d088167d748..272836d4c279f5b5f3bfecec3b8188a8266c5237 100644
--- a/dbrepo-metadata-db/1_setup-schema.sql
+++ b/dbrepo-metadata-db/1_setup-schema.sql
@@ -1,564 +1,564 @@
-BEGIN;
-
-CREATE TABLE IF NOT EXISTS `mdb_users`
-(
- id character varying(36) NOT NULL,
- username character varying(255) NOT NULL,
- firstname character varying(255),
- lastname character varying(255),
- email character varying(255) NOT NULL,
- orcid character varying(255),
- affiliation character varying(255),
- mariadb_password character varying(255) NOT NULL,
- theme character varying(255) NOT NULL default ('light'),
- language character varying(3) NOT NULL default ('en'),
- PRIMARY KEY (id),
- UNIQUE (username),
- UNIQUE (email)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_images`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- registry character varying(255) NOT NULL DEFAULT 'docker.io',
- name character varying(255) NOT NULL,
- version character varying(255) NOT NULL,
- default_port integer NOT NULL,
- dialect character varying(255) NOT NULL,
- driver_class character varying(255) NOT NULL,
- jdbc_method character varying(255) NOT NULL,
- is_default BOOLEAN NOT NULL DEFAULT FALSE,
- created timestamp NOT NULL DEFAULT NOW(),
- last_modified timestamp,
- PRIMARY KEY (id),
- UNIQUE (name, version),
- UNIQUE (is_default)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_images_date`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- iid bigint NOT NULL,
- database_format character varying(255) NOT NULL,
- unix_format character varying(255) NOT NULL,
- example character varying(255) NOT NULL,
- has_time boolean NOT NULL,
- created_at timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (id),
- FOREIGN KEY (iid) REFERENCES mdb_images (id),
- UNIQUE (database_format, unix_format, example)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_containers`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- internal_name character varying(255) NOT NULL,
- name character varying(255) NOT NULL,
- host character varying(255) NOT NULL,
- port integer NOT NULL default 3306,
- ui_host character varying(255) NOT NULL default host,
- ui_port integer NOT NULL default port,
- ui_additional_flags text,
- sidecar_host character varying(255),
- sidecar_port integer,
- image_id bigint NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- last_modified timestamp,
- privileged_username character varying(255) NOT NULL,
- privileged_password character varying(255) NOT NULL,
- quota integer NOT NULL DEFAULT 50,
- PRIMARY KEY (id),
- FOREIGN KEY (image_id) REFERENCES mdb_images (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_data`
-(
- ID bigint NOT NULL AUTO_INCREMENT,
- PROVENANCE text,
- FileEncoding text,
- FileType character varying(100),
- Version text,
- Seperator text,
- PRIMARY KEY (ID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_licenses`
-(
- identifier character varying(255) NOT NULL,
- uri text NOT NULL,
- description text NOT NULL,
- PRIMARY KEY (identifier),
- UNIQUE (uri(200))
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_databases`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- cid bigint NOT NULL,
- name character varying(255) NOT NULL,
- internal_name character varying(255) NOT NULL,
- exchange_name character varying(255) NOT NULL,
- description text,
- engine character varying(20),
- is_public boolean NOT NULL DEFAULT TRUE,
- image longblob,
- created_by character varying(36),
- owned_by character varying(36),
- contact_person character varying(36),
- created timestamp NOT NULL DEFAULT NOW(),
- last_modified timestamp,
- PRIMARY KEY (id),
- FOREIGN KEY (cid) REFERENCES mdb_containers (id) /* currently we only support one-to-one */,
- FOREIGN KEY (created_by) REFERENCES mdb_users (id),
- FOREIGN KEY (owned_by) REFERENCES mdb_users (id),
- FOREIGN KEY (contact_person) REFERENCES mdb_users (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_databases_subjects`
-(
- dbid BIGINT NOT NULL,
- subjects character varying(255) NOT NULL,
- PRIMARY KEY (dbid, subjects)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_tables`
-(
- ID bigint NOT NULL AUTO_INCREMENT,
- tDBID bigint NOT NULL,
- tName VARCHAR(64) NOT NULL,
- internal_name VARCHAR(64) NOT NULL,
- queue_name VARCHAR(255) NOT NULL,
- routing_key VARCHAR(255),
- tDescription VARCHAR(2048),
- num_rows BIGINT,
- data_length BIGINT,
- max_data_length BIGINT,
- avg_row_length BIGINT,
- `separator` CHAR(1),
- quote CHAR(1),
- element_null VARCHAR(50),
- skip_lines BIGINT,
- element_true VARCHAR(50),
- element_false VARCHAR(50),
- Version TEXT,
- created timestamp NOT NULL DEFAULT NOW(),
- versioned boolean not null default true,
- created_by character varying(36) NOT NULL,
- owned_by character varying(36) NOT NULL,
- last_modified timestamp,
- PRIMARY KEY (ID),
- UNIQUE (tDBID, internal_name),
- FOREIGN KEY (tDBID) REFERENCES mdb_databases (id),
- FOREIGN KEY (created_by) REFERENCES mdb_users (id),
- FOREIGN KEY (owned_by) REFERENCES mdb_users (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns`
-(
- ID BIGINT NOT NULL AUTO_INCREMENT,
- tID BIGINT NOT NULL,
- dfID BIGINT,
- cName VARCHAR(64),
- internal_name VARCHAR(64) NOT NULL,
- Datatype ENUM ('CHAR','VARCHAR','BINARY','VARBINARY','TINYBLOB','TINYTEXT','TEXT','BLOB','MEDIUMTEXT','MEDIUMBLOB','LONGTEXT','LONGBLOB','ENUM','SET','BIT','TINYINT','BOOL','SMALLINT','MEDIUMINT','INT','BIGINT','FLOAT','DOUBLE','DECIMAL','DATE','DATETIME','TIMESTAMP','TIME','YEAR'),
- length BIGINT NULL,
- ordinal_position INTEGER NOT NULL,
- index_length BIGINT NULL,
- description VARCHAR(2048),
- size BIGINT,
- d BIGINT,
- auto_generated BOOLEAN DEFAULT false,
- is_null_allowed BOOLEAN NOT NULL DEFAULT true,
- val_min NUMERIC NULL,
- val_max NUMERIC NULL,
- mean NUMERIC NULL,
- median NUMERIC NULL,
- std_dev Numeric NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- last_modified timestamp,
- FOREIGN KEY (tID) REFERENCES mdb_tables (ID) ON DELETE CASCADE,
- PRIMARY KEY (ID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_enums`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- column_id bigint NOT NULL,
- value CHARACTER VARYING(255) NOT NULL,
- FOREIGN KEY (column_id) REFERENCES mdb_columns (ID) ON DELETE CASCADE,
- PRIMARY KEY (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_sets`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- column_id bigint NOT NULL,
- value CHARACTER VARYING(255) NOT NULL,
- FOREIGN KEY (column_id) REFERENCES mdb_columns (ID) ON DELETE CASCADE,
- PRIMARY KEY (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_nom`
-(
- tID bigint,
- cID bigint,
- maxlength INTEGER,
- last_modified timestamp,
- created timestamp NOT NULL DEFAULT NOW(),
- FOREIGN KEY (tID, cID) REFERENCES mdb_columns (tID, ID),
- PRIMARY KEY (tID, cID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_cat`
-(
- tID bigint,
- cID bigint,
- num_cat INTEGER,
- -- cat_array TEXT[],
- last_modified timestamp,
- created timestamp NOT NULL DEFAULT NOW(),
- FOREIGN KEY (tID, cID) REFERENCES mdb_columns (tID, ID),
- PRIMARY KEY (tID, cID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_foreign_key`
-(
- fkid BIGINT NOT NULL AUTO_INCREMENT,
- tid BIGINT NOT NULL,
- rtid BIGINT NOT NULL,
- name VARCHAR(255) NOT NULL,
- on_update VARCHAR(50) NULL,
- on_delete VARCHAR(50) NULL,
- position INT NULL,
- PRIMARY KEY (fkid),
- FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE,
- FOREIGN KEY (rtid) REFERENCES mdb_tables (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_primary_key`
-(
- pkid BIGINT NOT NULL AUTO_INCREMENT,
- tID BIGINT NOT NULL,
- cid BIGINT NOT NULL,
- PRIMARY KEY (pkid),
- FOREIGN KEY (tID) REFERENCES mdb_tables (id) ON DELETE CASCADE,
- FOREIGN KEY (cid) REFERENCES mdb_columns (id) ON DELETE CASCADE
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_foreign_key_reference`
-(
- id BIGINT NOT NULL AUTO_INCREMENT,
- fkid BIGINT NOT NULL,
- cid BIGINT NOT NULL,
- rcid BIGINT NOT NULL,
- PRIMARY KEY (id),
- UNIQUE (fkid, cid, rcid),
- FOREIGN KEY (fkid) REFERENCES mdb_constraints_foreign_key (fkid) ON UPDATE CASCADE,
- FOREIGN KEY (cid) REFERENCES mdb_columns (id),
- FOREIGN KEY (rcid) REFERENCES mdb_columns (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_unique`
-(
- uid BIGINT NOT NULL AUTO_INCREMENT,
- name VARCHAR(255) NOT NULL,
- tid BIGINT NOT NULL,
- position INT NULL,
- PRIMARY KEY (uid),
- FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE
-);
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_unique_columns`
-(
- id BIGINT NOT NULL AUTO_INCREMENT,
- uid BIGINT NOT NULL,
- cid BIGINT NOT NULL,
- PRIMARY KEY (id),
- FOREIGN KEY (uid) REFERENCES mdb_constraints_unique (uid),
- FOREIGN KEY (cid) REFERENCES mdb_columns (id) ON DELETE CASCADE
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_constraints_checks`
-(
- id BIGINT NOT NULL AUTO_INCREMENT,
- tid BIGINT NOT NULL,
- checks VARCHAR(255) NOT NULL,
- PRIMARY KEY (id),
- FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE
-) WITH SYSTEM VERSIONING;
-
-
-CREATE TABLE IF NOT EXISTS `mdb_concepts`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- uri text not null,
- name VARCHAR(255) null,
- description TEXT null,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (id),
- UNIQUE (uri(200))
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_units`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- uri text not null,
- name VARCHAR(255) null,
- description TEXT null,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (id),
- UNIQUE (uri(200))
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_concepts`
-(
- id bigint NOT NULL,
- cID bigint NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (id, cid),
- FOREIGN KEY (cID) REFERENCES mdb_columns (ID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_columns_units`
-(
- id bigint NOT NULL,
- cID bigint NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (id, cID),
- FOREIGN KEY (cID) REFERENCES mdb_columns (ID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_view`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- vdbid bigint NOT NULL,
- vName VARCHAR(64) NOT NULL,
- internal_name VARCHAR(64) NOT NULL,
- Query TEXT NOT NULL,
- query_hash VARCHAR(255) NOT NULL,
- Public BOOLEAN NOT NULL,
- InitialView BOOLEAN NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- last_modified timestamp,
- created_by character varying(36) NOT NULL,
- PRIMARY KEY (id),
- FOREIGN KEY (vdbid) REFERENCES mdb_databases (id),
- FOREIGN KEY (created_by) REFERENCES mdb_users (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_banner_messages`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- type ENUM ('ERROR', 'WARNING', 'INFO') NOT NULL default 'INFO',
- message TEXT NOT NULL,
- link TEXT NULL,
- link_text VARCHAR(255) NULL,
- display_start timestamp NULL,
- display_end timestamp NULL,
- PRIMARY KEY (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_ontologies`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- prefix VARCHAR(8) NOT NULL,
- uri TEXT NOT NULL,
- uri_pattern TEXT,
- sparql_endpoint TEXT NULL,
- rdf_path TEXT NULL,
- last_modified timestamp,
- created timestamp NOT NULL DEFAULT NOW(),
- UNIQUE (prefix),
- UNIQUE (uri(200)),
- PRIMARY KEY (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_view_columns`
-(
- id BIGINT NOT NULL AUTO_INCREMENT,
- view_id BIGINT NOT NULL,
- dfID BIGINT,
- name VARCHAR(64),
- internal_name VARCHAR(64) NOT NULL,
- column_type ENUM ('CHAR','VARCHAR','BINARY','VARBINARY','TINYBLOB','TINYTEXT','TEXT','BLOB','MEDIUMTEXT','MEDIUMBLOB','LONGTEXT','LONGBLOB','ENUM','SET','BIT','TINYINT','BOOL','SMALLINT','MEDIUMINT','INT','BIGINT','FLOAT','DOUBLE','DECIMAL','DATE','DATETIME','TIMESTAMP','TIME','YEAR'),
- ordinal_position INTEGER NOT NULL,
- size BIGINT,
- d BIGINT,
- auto_generated BOOLEAN DEFAULT false,
- is_null_allowed BOOLEAN NOT NULL DEFAULT true,
- PRIMARY KEY (id),
- FOREIGN KEY (view_id) REFERENCES mdb_view (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifiers`
-(
- id BIGINT NOT NULL AUTO_INCREMENT,
- dbid BIGINT NOT NULL,
- qid BIGINT,
- vid BIGINT,
- tid BIGINT,
- publisher VARCHAR(255) NOT NULL,
- language VARCHAR(2),
- publication_year INTEGER NOT NULL,
- publication_month INTEGER,
- publication_day INTEGER,
- identifier_type ENUM ('DATABASE', 'SUBSET', 'VIEW', 'TABLE') NOT NULL,
- status ENUM ('DRAFT', 'PUBLISHED') NOT NULL DEFAULT ('PUBLISHED'),
- query TEXT,
- query_normalized TEXT,
- query_hash VARCHAR(255),
- execution TIMESTAMP,
- result_hash VARCHAR(255),
- result_number BIGINT,
- doi VARCHAR(255),
- created TIMESTAMP NOT NULL DEFAULT NOW(),
- created_by VARCHAR(36) NOT NULL,
- last_modified TIMESTAMP,
- PRIMARY KEY (id), /* must be a single id from persistent identifier concept */
- FOREIGN KEY (dbid) REFERENCES mdb_databases (id),
- FOREIGN KEY (created_by) REFERENCES mdb_users (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifier_licenses`
-(
- pid bigint NOT NULL,
- license_id VARCHAR(255) NOT NULL,
- PRIMARY KEY (pid, license_id),
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id),
- FOREIGN KEY (license_id) REFERENCES mdb_licenses (identifier)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifier_titles`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- pid bigint NOT NULL,
- title text NOT NULL,
- title_type ENUM ('ALTERNATIVE_TITLE', 'SUBTITLE', 'TRANSLATED_TITLE', 'OTHER'),
- language VARCHAR(2),
- PRIMARY KEY (id),
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifier_funders`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- pid bigint NOT NULL,
- funder_name VARCHAR(255) NOT NULL,
- funder_identifier TEXT,
- funder_identifier_type ENUM ('CROSSREF_FUNDER_ID', 'GRID', 'ISNI', 'ROR', 'OTHER'),
- scheme_uri text,
- award_number VARCHAR(255),
- award_title text,
- language VARCHAR(255),
- PRIMARY KEY (id),
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifier_descriptions`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- pid bigint NOT NULL,
- description text NOT NULL,
- description_type ENUM ('ABSTRACT', 'METHODS', 'SERIES_INFORMATION', 'TABLE_OF_CONTENTS', 'TECHNICAL_INFO', 'OTHER'),
- language VARCHAR(2),
- PRIMARY KEY (id),
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_related_identifiers`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- pid bigint NOT NULL,
- value varchar(255) NOT NULL,
- type varchar(255) NOT NULL,
- relation varchar(255) NOT NULL,
- PRIMARY KEY (id), /* must be a single id from persistent identifier concept */
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id),
- UNIQUE (pid, value)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_identifier_creators`
-(
- id bigint NOT NULL AUTO_INCREMENT,
- pid bigint NOT NULL,
- given_names text,
- family_name text,
- creator_name VARCHAR(255) NOT NULL,
- name_type ENUM ('PERSONAL', 'ORGANIZATIONAL') default 'PERSONAL',
- name_identifier text,
- name_identifier_scheme ENUM ('ROR', 'GRID', 'ISNI', 'ORCID'),
- name_identifier_scheme_uri text,
- affiliation VARCHAR(255),
- affiliation_identifier text,
- affiliation_identifier_scheme ENUM ('ROR', 'GRID', 'ISNI'),
- affiliation_identifier_scheme_uri text,
- PRIMARY KEY (id),
- FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_update`
-(
- uUserID character varying(255) NOT NULL,
- uDBID bigint NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (uUserID, uDBID),
- FOREIGN KEY (uDBID) REFERENCES mdb_databases (id)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_access`
-(
- aUserID character varying(255) NOT NULL,
- aDBID bigint REFERENCES mdb_databases (id),
- attime TIMESTAMP,
- download BOOLEAN,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (aUserID, aDBID)
-) WITH SYSTEM VERSIONING;
-
-CREATE TABLE IF NOT EXISTS `mdb_have_access`
-(
- user_id character varying(36) NOT NULL,
- database_id bigint REFERENCES mdb_databases (id),
- access_type ENUM ('READ', 'WRITE_OWN', 'WRITE_ALL') NOT NULL,
- created timestamp NOT NULL DEFAULT NOW(),
- PRIMARY KEY (user_id, database_id),
- FOREIGN KEY (user_id) REFERENCES mdb_users (id)
-) WITH SYSTEM VERSIONING;
-
-COMMIT;
-BEGIN;
-
-INSERT INTO `mdb_licenses` (identifier, uri, description)
-VALUES ('CC0-1.0', 'https://creativecommons.org/publicdomain/zero/1.0/legalcode',
- 'CC0 waives copyright interest in a work you''ve created and dedicates it to the world-wide public domain. Use CC0 to opt out of copyright entirely and ensure your work has the widest reach.'),
- ('CC-BY-4.0', 'https://creativecommons.org/licenses/by/4.0/legalcode',
- 'The Creative Commons Attribution license allows re-distribution and re-use of a licensed work on the condition that the creator is appropriately credited.');
-
-INSERT INTO `mdb_images` (name, registry, version, default_port, dialect, driver_class, jdbc_method)
-VALUES ('mariadb', 'docker.io', '11.1.3', 3306, 'org.hibernate.dialect.MariaDBDialect', 'org.mariadb.jdbc.Driver',
- 'mariadb');
-
-INSERT INTO `mdb_images_date` (iid, database_format, unix_format, example, has_time)
-VALUES (1, '%Y-%c-%d %H:%i:%S.%f', 'yyyy-MM-dd HH:mm:ss.SSSSSS', '2022-01-30 13:44:25.499', true),
- (1, '%Y-%c-%d %H:%i:%S', 'yyyy-MM-dd HH:mm:ss', '2022-01-30 13:44:25', true),
- (1, '%Y-%c-%d', 'yyyy-MM-dd', '2022-01-30', false),
- (1, '%H:%i:%S', 'HH:mm:ss', '13:44:25', true),
- (1, '%d.%c.%Y', 'dd.MM.yyyy', '30.01.2022', false);
-
-INSERT INTO `mdb_ontologies` (prefix, uri, uri_pattern, sparql_endpoint, rdf_path)
-VALUES ('om', 'http://www.ontology-of-units-of-measure.org/resource/om-2/',
- 'http://www.ontology-of-units-of-measure.org/resource/om-2/.*', null, 'rdf/om-2.0.rdf'),
- ('wd', 'http://www.wikidata.org/', 'http://www.wikidata.org/entity/.*', 'https://query.wikidata.org/sparql',
- null),
- ('mo', 'http://purl.org/ontology/mo/', 'http://purl.org/ontology/mo/.*', null, null),
- ('dc', 'http://purl.org/dc/elements/1.1/', null, null, null),
- ('xsd', 'http://www.w3.org/2001/XMLSchema#', null, null, null),
- ('tl', 'http://purl.org/NET/c4dm/timeline.owl#', null, null, null),
- ('foaf', 'http://xmlns.com/foaf/0.1/', null, null, null),
- ('schema', 'http://schema.org/', null, null, null),
- ('rdf', 'http://www.w3.org/1999/02/22-rdf-syntax-ns#', null, null, null),
- ('rdfs', 'http://www.w3.org/2000/01/rdf-schema#', null, null, null),
- ('owl', 'http://www.w3.org/2002/07/owl#', null, null, null),
- ('prov', 'http://www.w3.org/ns/prov#', null, null, null),
- ('db', 'http://dbpedia.org', 'http://dbpedia.org/ontology/.*', 'http://dbpedia.org/sparql', null);
-COMMIT;
+ BEGIN;
+
+ CREATE TABLE IF NOT EXISTS `mdb_users`
+ (
+ id character varying(36) NOT NULL,
+ username character varying(255) NOT NULL,
+ firstname character varying(255),
+ lastname character varying(255),
+ email character varying(255) NOT NULL,
+ orcid character varying(255),
+ affiliation character varying(255),
+ mariadb_password character varying(255) NOT NULL,
+ theme character varying(255) NOT NULL default ('light'),
+ language character varying(3) NOT NULL default ('en'),
+ PRIMARY KEY (id),
+ UNIQUE (username),
+ UNIQUE (email)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_images`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ registry character varying(255) NOT NULL DEFAULT 'docker.io',
+ name character varying(255) NOT NULL,
+ version character varying(255) NOT NULL,
+ default_port integer NOT NULL,
+ dialect character varying(255) NOT NULL,
+ driver_class character varying(255) NOT NULL,
+ jdbc_method character varying(255) NOT NULL,
+ is_default BOOLEAN NOT NULL DEFAULT FALSE,
+ created timestamp NOT NULL DEFAULT NOW(),
+ last_modified timestamp,
+ PRIMARY KEY (id),
+ UNIQUE (name, version),
+ UNIQUE (is_default)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_images_date`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ iid bigint NOT NULL,
+ database_format character varying(255) NOT NULL,
+ unix_format character varying(255) NOT NULL,
+ example character varying(255) NOT NULL,
+ has_time boolean NOT NULL,
+ created_at timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (id),
+ FOREIGN KEY (iid) REFERENCES mdb_images (id),
+ UNIQUE (database_format, unix_format, example)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_containers`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ internal_name character varying(255) NOT NULL,
+ name character varying(255) NOT NULL,
+ host character varying(255) NOT NULL,
+ port integer NOT NULL default 3306,
+ ui_host character varying(255) NOT NULL default host,
+ ui_port integer NOT NULL default port,
+ ui_additional_flags text,
+ sidecar_host character varying(255),
+ sidecar_port integer,
+ image_id bigint NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ last_modified timestamp,
+ privileged_username character varying(255) NOT NULL,
+ privileged_password character varying(255) NOT NULL,
+ quota integer NOT NULL DEFAULT 50,
+ PRIMARY KEY (id),
+ FOREIGN KEY (image_id) REFERENCES mdb_images (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_data`
+ (
+ ID bigint NOT NULL AUTO_INCREMENT,
+ PROVENANCE text,
+ FileEncoding text,
+ FileType character varying(100),
+ Version text,
+ Seperator text,
+ PRIMARY KEY (ID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_licenses`
+ (
+ identifier character varying(255) NOT NULL,
+ uri text NOT NULL,
+ description text NOT NULL,
+ PRIMARY KEY (identifier),
+ UNIQUE (uri(200))
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_databases`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ cid bigint NOT NULL,
+ name character varying(255) NOT NULL,
+ internal_name character varying(255) NOT NULL,
+ exchange_name character varying(255) NOT NULL,
+ description text,
+ engine character varying(20),
+ is_public boolean NOT NULL DEFAULT TRUE,
+ image longblob,
+ created_by character varying(36),
+ owned_by character varying(36),
+ contact_person character varying(36),
+ created timestamp NOT NULL DEFAULT NOW(),
+ last_modified timestamp,
+ PRIMARY KEY (id),
+ FOREIGN KEY (cid) REFERENCES mdb_containers (id) /* currently we only support one-to-one */,
+ FOREIGN KEY (created_by) REFERENCES mdb_users (id),
+ FOREIGN KEY (owned_by) REFERENCES mdb_users (id),
+ FOREIGN KEY (contact_person) REFERENCES mdb_users (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_databases_subjects`
+ (
+ dbid BIGINT NOT NULL,
+ subjects character varying(255) NOT NULL,
+ PRIMARY KEY (dbid, subjects)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_tables`
+ (
+ ID bigint NOT NULL AUTO_INCREMENT,
+ tDBID bigint NOT NULL,
+ tName VARCHAR(64) NOT NULL,
+ internal_name VARCHAR(64) NOT NULL,
+ queue_name VARCHAR(255) NOT NULL,
+ routing_key VARCHAR(255),
+ tDescription VARCHAR(2048),
+ num_rows BIGINT,
+ data_length BIGINT,
+ max_data_length BIGINT,
+ avg_row_length BIGINT,
+ `separator` CHAR(1),
+ quote CHAR(1),
+ element_null VARCHAR(50),
+ skip_lines BIGINT,
+ element_true VARCHAR(50),
+ element_false VARCHAR(50),
+ Version TEXT,
+ created timestamp NOT NULL DEFAULT NOW(),
+ versioned boolean not null default true,
+ created_by character varying(36) NOT NULL,
+ owned_by character varying(36) NOT NULL,
+ last_modified timestamp,
+ PRIMARY KEY (ID),
+ UNIQUE (tDBID, internal_name),
+ FOREIGN KEY (tDBID) REFERENCES mdb_databases (id),
+ FOREIGN KEY (created_by) REFERENCES mdb_users (id),
+ FOREIGN KEY (owned_by) REFERENCES mdb_users (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns`
+ (
+ ID BIGINT NOT NULL AUTO_INCREMENT,
+ tID BIGINT NOT NULL,
+ dfID BIGINT,
+ cName VARCHAR(64),
+ internal_name VARCHAR(64) NOT NULL,
+ Datatype ENUM ('CHAR','VARCHAR','BINARY','VARBINARY','TINYBLOB','TINYTEXT','TEXT','BLOB','MEDIUMTEXT','MEDIUMBLOB','LONGTEXT','LONGBLOB','ENUM','SET','BIT','TINYINT','BOOL','SMALLINT','MEDIUMINT','INT','BIGINT','FLOAT','DOUBLE','DECIMAL','DATE','DATETIME','TIMESTAMP','TIME','YEAR'),
+ length BIGINT NULL,
+ ordinal_position INTEGER NOT NULL,
+ index_length BIGINT NULL,
+ description VARCHAR(2048),
+ size BIGINT,
+ d BIGINT,
+ auto_generated BOOLEAN DEFAULT false,
+ is_null_allowed BOOLEAN NOT NULL DEFAULT true,
+ val_min NUMERIC NULL,
+ val_max NUMERIC NULL,
+ mean NUMERIC NULL,
+ median NUMERIC NULL,
+ std_dev Numeric NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ last_modified timestamp,
+ FOREIGN KEY (tID) REFERENCES mdb_tables (ID) ON DELETE CASCADE,
+ PRIMARY KEY (ID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_enums`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ column_id bigint NOT NULL,
+ value CHARACTER VARYING(255) NOT NULL,
+ FOREIGN KEY (column_id) REFERENCES mdb_columns (ID) ON DELETE CASCADE,
+ PRIMARY KEY (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_sets`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ column_id bigint NOT NULL,
+ value CHARACTER VARYING(255) NOT NULL,
+ FOREIGN KEY (column_id) REFERENCES mdb_columns (ID) ON DELETE CASCADE,
+ PRIMARY KEY (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_nom`
+ (
+ tID bigint,
+ cID bigint,
+ maxlength INTEGER,
+ last_modified timestamp,
+ created timestamp NOT NULL DEFAULT NOW(),
+ FOREIGN KEY (tID, cID) REFERENCES mdb_columns (tID, ID),
+ PRIMARY KEY (tID, cID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_cat`
+ (
+ tID bigint,
+ cID bigint,
+ num_cat INTEGER,
+ -- cat_array TEXT[],
+ last_modified timestamp,
+ created timestamp NOT NULL DEFAULT NOW(),
+ FOREIGN KEY (tID, cID) REFERENCES mdb_columns (tID, ID),
+ PRIMARY KEY (tID, cID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_foreign_key`
+ (
+ fkid BIGINT NOT NULL AUTO_INCREMENT,
+ tid BIGINT NOT NULL,
+ rtid BIGINT NOT NULL,
+ name VARCHAR(255) NOT NULL,
+ on_update VARCHAR(50) NULL,
+ on_delete VARCHAR(50) NULL,
+ position INT NULL,
+ PRIMARY KEY (fkid),
+ FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE,
+ FOREIGN KEY (rtid) REFERENCES mdb_tables (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_primary_key`
+ (
+ pkid BIGINT NOT NULL AUTO_INCREMENT,
+ tID BIGINT NOT NULL,
+ cid BIGINT NOT NULL,
+ PRIMARY KEY (pkid),
+ FOREIGN KEY (tID) REFERENCES mdb_tables (id) ON DELETE CASCADE,
+ FOREIGN KEY (cid) REFERENCES mdb_columns (id) ON DELETE CASCADE
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_foreign_key_reference`
+ (
+ id BIGINT NOT NULL AUTO_INCREMENT,
+ fkid BIGINT NOT NULL,
+ cid BIGINT NOT NULL,
+ rcid BIGINT NOT NULL,
+ PRIMARY KEY (id),
+ UNIQUE (fkid, cid, rcid),
+ FOREIGN KEY (fkid) REFERENCES mdb_constraints_foreign_key (fkid) ON UPDATE CASCADE,
+ FOREIGN KEY (cid) REFERENCES mdb_columns (id),
+ FOREIGN KEY (rcid) REFERENCES mdb_columns (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_unique`
+ (
+ uid BIGINT NOT NULL AUTO_INCREMENT,
+ name VARCHAR(255) NOT NULL,
+ tid BIGINT NOT NULL,
+ position INT NULL,
+ PRIMARY KEY (uid),
+ FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE
+ );
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_unique_columns`
+ (
+ id BIGINT NOT NULL AUTO_INCREMENT,
+ uid BIGINT NOT NULL,
+ cid BIGINT NOT NULL,
+ PRIMARY KEY (id),
+ FOREIGN KEY (uid) REFERENCES mdb_constraints_unique (uid),
+ FOREIGN KEY (cid) REFERENCES mdb_columns (id) ON DELETE CASCADE
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_constraints_checks`
+ (
+ id BIGINT NOT NULL AUTO_INCREMENT,
+ tid BIGINT NOT NULL,
+ checks VARCHAR(255) NOT NULL,
+ PRIMARY KEY (id),
+ FOREIGN KEY (tid) REFERENCES mdb_tables (id) ON DELETE CASCADE
+ ) WITH SYSTEM VERSIONING;
+
+
+ CREATE TABLE IF NOT EXISTS `mdb_concepts`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ uri text not null,
+ name VARCHAR(255) null,
+ description TEXT null,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (id),
+ UNIQUE (uri(200))
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_units`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ uri text not null,
+ name VARCHAR(255) null,
+ description TEXT null,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (id),
+ UNIQUE (uri(200))
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_concepts`
+ (
+ id bigint NOT NULL,
+ cID bigint NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (id, cid),
+ FOREIGN KEY (cID) REFERENCES mdb_columns (ID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_columns_units`
+ (
+ id bigint NOT NULL,
+ cID bigint NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (id, cID),
+ FOREIGN KEY (cID) REFERENCES mdb_columns (ID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_view`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ vdbid bigint NOT NULL,
+ vName VARCHAR(64) NOT NULL,
+ internal_name VARCHAR(64) NOT NULL,
+ Query TEXT NOT NULL,
+ query_hash VARCHAR(255) NOT NULL,
+ Public BOOLEAN NOT NULL,
+ InitialView BOOLEAN NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ last_modified timestamp,
+ created_by character varying(36) NOT NULL,
+ PRIMARY KEY (id),
+ FOREIGN KEY (vdbid) REFERENCES mdb_databases (id),
+ FOREIGN KEY (created_by) REFERENCES mdb_users (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_banner_messages`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ type ENUM ('ERROR', 'WARNING', 'INFO') NOT NULL default 'INFO',
+ message TEXT NOT NULL,
+ link TEXT NULL,
+ link_text VARCHAR(255) NULL,
+ display_start timestamp NULL,
+ display_end timestamp NULL,
+ PRIMARY KEY (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_ontologies`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ prefix VARCHAR(8) NOT NULL,
+ uri TEXT NOT NULL,
+ uri_pattern TEXT,
+ sparql_endpoint TEXT NULL,
+ rdf_path TEXT NULL,
+ last_modified timestamp,
+ created timestamp NOT NULL DEFAULT NOW(),
+ UNIQUE (prefix),
+ UNIQUE (uri(200)),
+ PRIMARY KEY (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_view_columns`
+ (
+ id BIGINT NOT NULL AUTO_INCREMENT,
+ view_id BIGINT NOT NULL,
+ dfID BIGINT,
+ name VARCHAR(64),
+ internal_name VARCHAR(64) NOT NULL,
+ column_type ENUM ('CHAR','VARCHAR','BINARY','VARBINARY','TINYBLOB','TINYTEXT','TEXT','BLOB','MEDIUMTEXT','MEDIUMBLOB','LONGTEXT','LONGBLOB','ENUM','SET','BIT','TINYINT','BOOL','SMALLINT','MEDIUMINT','INT','BIGINT','FLOAT','DOUBLE','DECIMAL','DATE','DATETIME','TIMESTAMP','TIME','YEAR'),
+ ordinal_position INTEGER NOT NULL,
+ size BIGINT,
+ d BIGINT,
+ auto_generated BOOLEAN DEFAULT false,
+ is_null_allowed BOOLEAN NOT NULL DEFAULT true,
+ PRIMARY KEY (id),
+ FOREIGN KEY (view_id) REFERENCES mdb_view (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifiers`
+ (
+ id BIGINT NOT NULL AUTO_INCREMENT,
+ dbid BIGINT NOT NULL,
+ qid BIGINT,
+ vid BIGINT,
+ tid BIGINT,
+ publisher VARCHAR(255) NOT NULL,
+ language VARCHAR(2),
+ publication_year INTEGER NOT NULL,
+ publication_month INTEGER,
+ publication_day INTEGER,
+ identifier_type ENUM ('DATABASE', 'SUBSET', 'VIEW', 'TABLE') NOT NULL,
+ status ENUM ('DRAFT', 'PUBLISHED') NOT NULL DEFAULT ('PUBLISHED'),
+ query TEXT,
+ query_normalized TEXT,
+ query_hash VARCHAR(255),
+ execution TIMESTAMP,
+ result_hash VARCHAR(255),
+ result_number BIGINT,
+ doi VARCHAR(255),
+ created TIMESTAMP NOT NULL DEFAULT NOW(),
+ created_by VARCHAR(36) NOT NULL,
+ last_modified TIMESTAMP,
+ PRIMARY KEY (id), /* must be a single id from persistent identifier concept */
+ FOREIGN KEY (dbid) REFERENCES mdb_databases (id),
+ FOREIGN KEY (created_by) REFERENCES mdb_users (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifier_licenses`
+ (
+ pid bigint NOT NULL,
+ license_id VARCHAR(255) NOT NULL,
+ PRIMARY KEY (pid, license_id),
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id),
+ FOREIGN KEY (license_id) REFERENCES mdb_licenses (identifier)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifier_titles`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ pid bigint NOT NULL,
+ title text NOT NULL,
+ title_type ENUM ('ALTERNATIVE_TITLE', 'SUBTITLE', 'TRANSLATED_TITLE', 'OTHER'),
+ language VARCHAR(2),
+ PRIMARY KEY (id),
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifier_funders`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ pid bigint NOT NULL,
+ funder_name VARCHAR(255) NOT NULL,
+ funder_identifier TEXT,
+ funder_identifier_type ENUM ('CROSSREF_FUNDER_ID', 'GRID', 'ISNI', 'ROR', 'OTHER'),
+ scheme_uri text,
+ award_number VARCHAR(255),
+ award_title text,
+ language VARCHAR(255),
+ PRIMARY KEY (id),
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifier_descriptions`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ pid bigint NOT NULL,
+ description text NOT NULL,
+ description_type ENUM ('ABSTRACT', 'METHODS', 'SERIES_INFORMATION', 'TABLE_OF_CONTENTS', 'TECHNICAL_INFO', 'OTHER'),
+ language VARCHAR(2),
+ PRIMARY KEY (id),
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_related_identifiers`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ pid bigint NOT NULL,
+ value varchar(255) NOT NULL,
+ type varchar(255) NOT NULL,
+ relation varchar(255) NOT NULL,
+ PRIMARY KEY (id), /* must be a single id from persistent identifier concept */
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id),
+ UNIQUE (pid, value)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_identifier_creators`
+ (
+ id bigint NOT NULL AUTO_INCREMENT,
+ pid bigint NOT NULL,
+ given_names text,
+ family_name text,
+ creator_name VARCHAR(255) NOT NULL,
+ name_type ENUM ('PERSONAL', 'ORGANIZATIONAL') default 'PERSONAL',
+ name_identifier text,
+ name_identifier_scheme ENUM ('ROR', 'GRID', 'ISNI', 'ORCID'),
+ name_identifier_scheme_uri text,
+ affiliation VARCHAR(255),
+ affiliation_identifier text,
+ affiliation_identifier_scheme ENUM ('ROR', 'GRID', 'ISNI'),
+ affiliation_identifier_scheme_uri text,
+ PRIMARY KEY (id),
+ FOREIGN KEY (pid) REFERENCES mdb_identifiers (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_update`
+ (
+ uUserID character varying(255) NOT NULL,
+ uDBID bigint NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (uUserID, uDBID),
+ FOREIGN KEY (uDBID) REFERENCES mdb_databases (id)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_access`
+ (
+ aUserID character varying(255) NOT NULL,
+ aDBID bigint REFERENCES mdb_databases (id),
+ attime TIMESTAMP,
+ download BOOLEAN,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (aUserID, aDBID)
+ ) WITH SYSTEM VERSIONING;
+
+ CREATE TABLE IF NOT EXISTS `mdb_have_access`
+ (
+ user_id character varying(36) NOT NULL,
+ database_id bigint REFERENCES mdb_databases (id),
+ access_type ENUM ('READ', 'WRITE_OWN', 'WRITE_ALL') NOT NULL,
+ created timestamp NOT NULL DEFAULT NOW(),
+ PRIMARY KEY (user_id, database_id),
+ FOREIGN KEY (user_id) REFERENCES mdb_users (id)
+ ) WITH SYSTEM VERSIONING;
+
+ COMMIT;
+ BEGIN;
+
+ INSERT INTO `mdb_licenses` (identifier, uri, description)
+ VALUES ('CC0-1.0', 'https://creativecommons.org/publicdomain/zero/1.0/legalcode',
+ 'CC0 waives copyright interest in a work you''ve created and dedicates it to the world-wide public domain. Use CC0 to opt out of copyright entirely and ensure your work has the widest reach.'),
+ ('CC-BY-4.0', 'https://creativecommons.org/licenses/by/4.0/legalcode',
+ 'The Creative Commons Attribution license allows re-distribution and re-use of a licensed work on the condition that the creator is appropriately credited.');
+
+ INSERT INTO `mdb_images` (name, registry, version, default_port, dialect, driver_class, jdbc_method)
+ VALUES ('mariadb', 'docker.io', '11.1.3', 3306, 'org.hibernate.dialect.MariaDBDialect', 'org.mariadb.jdbc.Driver',
+ 'mariadb');
+
+ INSERT INTO `mdb_images_date` (iid, database_format, unix_format, example, has_time)
+ VALUES (1, '%Y-%c-%d %H:%i:%S.%f', 'yyyy-MM-dd HH:mm:ss.SSSSSS', '2022-01-30 13:44:25.499', true),
+ (1, '%Y-%c-%d %H:%i:%S', 'yyyy-MM-dd HH:mm:ss', '2022-01-30 13:44:25', true),
+ (1, '%Y-%c-%d', 'yyyy-MM-dd', '2022-01-30', false),
+ (1, '%H:%i:%S', 'HH:mm:ss', '13:44:25', true),
+ (1, '%d.%c.%Y', 'dd.MM.yyyy', '30.01.2022', false);
+
+ INSERT INTO `mdb_ontologies` (prefix, uri, uri_pattern, sparql_endpoint, rdf_path)
+ VALUES ('om', 'http://www.ontology-of-units-of-measure.org/resource/om-2/',
+ 'http://www.ontology-of-units-of-measure.org/resource/om-2/.*', null, 'rdf/om-2.0.rdf'),
+ ('wd', 'http://www.wikidata.org/', 'http://www.wikidata.org/entity/.*', 'https://query.wikidata.org/sparql',
+ null),
+ ('mo', 'http://purl.org/ontology/mo/', 'http://purl.org/ontology/mo/.*', null, null),
+ ('dc', 'http://purl.org/dc/elements/1.1/', null, null, null),
+ ('xsd', 'http://www.w3.org/2001/XMLSchema#', null, null, null),
+ ('tl', 'http://purl.org/NET/c4dm/timeline.owl#', null, null, null),
+ ('foaf', 'http://xmlns.com/foaf/0.1/', null, null, null),
+ ('schema', 'http://schema.org/', null, null, null),
+ ('rdf', 'http://www.w3.org/1999/02/22-rdf-syntax-ns#', null, null, null),
+ ('rdfs', 'http://www.w3.org/2000/01/rdf-schema#', null, null, null),
+ ('owl', 'http://www.w3.org/2002/07/owl#', null, null, null),
+ ('prov', 'http://www.w3.org/ns/prov#', null, null, null),
+ ('db', 'http://dbpedia.org', 'http://dbpedia.org/ontology/.*', 'http://dbpedia.org/sparql', null);
+ COMMIT;
diff --git a/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/TableRepository.java b/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/TableRepository.java
new file mode 100644
index 0000000000000000000000000000000000000000..fda9e78ce537b20201ecf88487171a9bb956ea16
--- /dev/null
+++ b/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/TableRepository.java
@@ -0,0 +1,13 @@
+package at.tuwien.repository;
+
+import at.tuwien.entities.database.table.Table;
+import org.springframework.data.jpa.repository.JpaRepository;
+import org.springframework.stereotype.Repository;
+
+/**
+ * TO BE USED READONLY
+ */
+@Repository
+public interface TableRepository extends JpaRepository<Table, Long> {
+
+}
diff --git a/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/ViewRepository.java b/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/ViewRepository.java
new file mode 100644
index 0000000000000000000000000000000000000000..de678d90ae99d41a76987be29b1a001929222ceb
--- /dev/null
+++ b/dbrepo-metadata-service/repositories/src/main/java/at/tuwien/repository/ViewRepository.java
@@ -0,0 +1,13 @@
+package at.tuwien.repository;
+
+import at.tuwien.entities.database.View;
+import org.springframework.data.jpa.repository.JpaRepository;
+import org.springframework.stereotype.Repository;
+
+/**
+ * TO BE USED READONLY
+ */
+@Repository
+public interface ViewRepository extends JpaRepository<View, Long> {
+
+}
diff --git a/dbrepo-metadata-service/services/src/main/java/at/tuwien/config/MetricsConfig.java b/dbrepo-metadata-service/services/src/main/java/at/tuwien/config/MetricsConfig.java
index 450be2f7df8b52fe493dd498dc0422350bb3ff39..e366666244515dca7965663ef5ce5016a734dd4a 100644
--- a/dbrepo-metadata-service/services/src/main/java/at/tuwien/config/MetricsConfig.java
+++ b/dbrepo-metadata-service/services/src/main/java/at/tuwien/config/MetricsConfig.java
@@ -1,13 +1,81 @@
package at.tuwien.config;
+import at.tuwien.entities.database.Database;
+import at.tuwien.entities.database.table.Table;
+import at.tuwien.repository.DatabaseRepository;
+import at.tuwien.repository.IdentifierRepository;
+import at.tuwien.repository.TableRepository;
+import at.tuwien.repository.ViewRepository;
+import at.tuwien.service.DatabaseService;
+import io.micrometer.core.instrument.Gauge;
+import io.micrometer.core.instrument.Metrics;
import io.micrometer.observation.ObservationRegistry;
import io.micrometer.observation.aop.ObservedAspect;
+import lombok.extern.log4j.Log4j2;
+import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.context.annotation.Bean;
import org.springframework.context.annotation.Configuration;
+import java.util.List;
+
+@Log4j2
@Configuration
public class MetricsConfig {
+ private final ViewRepository viewRepository;
+ private final TableRepository tableRepository;
+ private final DatabaseRepository databaseRepository;
+ private final IdentifierRepository identifierRepository;
+
+ @Autowired
+ public MetricsConfig(ViewRepository viewRepository, TableRepository tableRepository,
+ DatabaseRepository databaseRepository, IdentifierRepository identifierRepository) {
+ this.viewRepository = viewRepository;
+ this.tableRepository = tableRepository;
+ this.databaseRepository = databaseRepository;
+ this.identifierRepository = identifierRepository;
+ }
+
+ @Bean
+ public Gauge databaseCountGauge() {
+ return Gauge.builder("dbrepo.database.count", () -> databaseRepository.findAll().size())
+ .description("The total number of managed research databases")
+ .strongReference(true)
+ .register(Metrics.globalRegistry);
+ }
+
+ @Bean
+ public Gauge viewCountGauge() {
+ return Gauge.builder("dbrepo.view.count", () -> viewRepository.findAll().size())
+ .description("The total number of available view data sources")
+ .strongReference(true)
+ .register(Metrics.globalRegistry);
+ }
+
+ @Bean
+ public Gauge subsetCountGauge() {
+ return Gauge.builder("dbrepo.subset.count", () -> identifierRepository.findAllSubsetIdentifiers().size())
+ .description("The total number of available subset data sources")
+ .strongReference(true)
+ .register(Metrics.globalRegistry);
+ }
+
+ @Bean
+ public Gauge tableCountGauge() {
+ return Gauge.builder("dbrepo.table.count", () -> tableRepository.findAll().size())
+ .description("The total number of available table data sources")
+ .strongReference(true)
+ .register(Metrics.globalRegistry);
+ }
+
+ @Bean
+ public Gauge volumeSumGauge() {
+ return Gauge.builder("dbrepo.volume.sum", () -> tableRepository.findAll().stream().map(Table::getDataLength).mapToLong(d -> d).sum())
+ .description("The total volume of available research data")
+ .strongReference(true)
+ .register(Metrics.globalRegistry);
+ }
+
@Bean
public ObservedAspect observedAspect(ObservationRegistry observationRegistry) {
return new ObservedAspect(observationRegistry);
diff --git a/dbrepo-metric-db/prometheus.yml b/dbrepo-metric-db/prometheus.yml
new file mode 100644
index 0000000000000000000000000000000000000000..447396d167785e7973855314431230fb1193bd0d
--- /dev/null
+++ b/dbrepo-metric-db/prometheus.yml
@@ -0,0 +1,19 @@
+global:
+ scrape_interval: 1m
+
+rule_files: []
+
+alerting:
+ alertmanagers:
+ - static_configs:
+ - targets: []
+
+scrape_configs:
+ - job_name: 'spring boot scrape'
+ metrics_path: '/actuator/prometheus'
+ static_configs:
+ - targets: ['data-service:8080', 'metadata-service:8080']
+ - job_name: 'metrics scrape'
+ metrics_path: '/metrics'
+ static_configs:
+ - targets: ['auth-service:8080', 'analyse-service:8080', 'search-service:8080', 'data-db-sidecar:8080', 'broker-service:15692', 'ui:3000', 'dashboard-service:3000', 'storage-service:9090', 'upload-service:8080']
diff --git a/dbrepo-storage-service/README.md b/dbrepo-storage-service/README.md
new file mode 100644
index 0000000000000000000000000000000000000000..b38fa4ac60840143df2aed35c592d8cec0329b33
--- /dev/null
+++ b/dbrepo-storage-service/README.md
@@ -0,0 +1,11 @@
+# Storage Service
+
+Based on [SeaweedFS](https://github.com/seaweedfs/seaweedfs).
+
+### Endpoints
+
+#### Filer
+
+Upload files and inspect the S3-buckets.
+
+- Filer: http://localhost:8888
diff --git a/dbrepo-ui/Dockerfile b/dbrepo-ui/Dockerfile
index 33f62cce86a6c5f794db08c0555a8b2ffeb4a935..130ce0082d3a5a2c68300a6ce0ece873d81e162c 100644
--- a/dbrepo-ui/Dockerfile
+++ b/dbrepo-ui/Dockerfile
@@ -1,10 +1,10 @@
-FROM oven/bun:1.0.26-alpine AS build
+FROM node:18.20.4-alpine3.20 AS build
WORKDIR /app
COPY ./package.json ./package.json
-RUN bun install
+RUN npm install
ENV NODE_ENV="production"
@@ -22,9 +22,9 @@ COPY ./stores ./stores
COPY ./utils ./utils
COPY ./nuxt.config.ts ./nuxt.config.ts
-RUN bun run build
+RUN npm run build
-FROM oven/bun:1.0.26-alpine AS runtime
+FROM node:18.20.4-alpine3.20 AS runtime
ARG APP_VERSION="latest"
ARG COMMIT=""
@@ -42,4 +42,4 @@ ENV NUXT_PUBLIC_COMMIT="${COMMIT:-}"
EXPOSE 3000
-ENTRYPOINT [ "bun", "run", ".output/server/index.mjs" ]
+ENTRYPOINT [ "node", ".output/server/index.mjs" ]
diff --git a/dbrepo-ui/bun.lockb b/dbrepo-ui/bun.lockb
index 34e1f3dd06864bd64d099c2212a7b45cb5140d8f..08343a9606e23719aa606a7bb102499777d9e001 100755
Binary files a/dbrepo-ui/bun.lockb and b/dbrepo-ui/bun.lockb differ
diff --git a/dbrepo-ui/composables/axios-instance.ts b/dbrepo-ui/composables/axios-instance.ts
index d4f274b717e938c3305bc20463c93d9e9474e079..95edea3c28d5c12f1f2422ccf8b457e409c5b459 100644
--- a/dbrepo-ui/composables/axios-instance.ts
+++ b/dbrepo-ui/composables/axios-instance.ts
@@ -4,7 +4,7 @@ import {useUserStore} from '@/stores/user'
let instance: AxiosInstance | null = null;
export const useAxiosInstance = () => {
- const config = useRuntimeConfig();
+ const config = useRuntimeConfig()
const userStore = useUserStore()
if (!instance) {
instance = axios.create({
diff --git a/dbrepo-ui/composables/user-service.ts b/dbrepo-ui/composables/user-service.ts
index 4bfedfd9ebdd5216eeb98751b823955828d1cb17..e68b914e0e5bd5cfc410b82213e18f3eb0fa32ab 100644
--- a/dbrepo-ui/composables/user-service.ts
+++ b/dbrepo-ui/composables/user-service.ts
@@ -83,8 +83,14 @@ export const useUserService = (): any => {
async function obtainToken(username: string, password: string): Promise<KeycloakOpenIdTokenDto> {
console.debug('obtain user token for user with username', username)
return new Promise<KeycloakOpenIdTokenDto>((resolve, reject) => {
+ const config = useRuntimeConfig()
const userStore = useUserStore()
- axios.post<KeycloakOpenIdTokenDto>('/api/user/token', {username, password})
+ const instance = axios.create({
+ timeout: 90_000,
+ params: {},
+ baseURL: config.public.api.client
+ })
+ instance.post<KeycloakOpenIdTokenDto>('/api/user/token', {username, password})
.then((response) => {
console.info('Obtained user token')
// eslint-disable-next-line camelcase
@@ -103,7 +109,13 @@ export const useUserService = (): any => {
async function refreshToken(refreshToken: string): Promise<KeycloakOpenIdTokenDto> {
console.debug('refresh user token')
return new Promise<KeycloakOpenIdTokenDto>((resolve, reject) => {
- axios.put<KeycloakOpenIdTokenDto>('/api/user/token', {refresh_token: refreshToken})
+ const config = useRuntimeConfig()
+ const instance = axios.create({
+ timeout: 90_000,
+ params: {},
+ baseURL: config.public.api.client
+ })
+ instance.put<KeycloakOpenIdTokenDto>('/api/user/token', {refresh_token: refreshToken})
.then((response) => {
console.info('Refreshed user token')
const userStore = useUserStore()
diff --git a/dbrepo-ui/nuxt.config.ts b/dbrepo-ui/nuxt.config.ts
index dc65c7ac3aca83cc1493bf69d20447273219c677..f33c990a71ca2ca1b4e594a6b219b8ac5cbcb748 100644
--- a/dbrepo-ui/nuxt.config.ts
+++ b/dbrepo-ui/nuxt.config.ts
@@ -81,7 +81,8 @@ export default defineNuxtConfig({
server: 'http://gateway-service',
},
upload: {
- client: 'http://localhost/api/upload/files'
+ client: 'http://localhost/api/upload/files',
+ prefix: '/'
},
database: {
unsupported: '*,AVG,BIT_AND,BIT_OR,BIT_XOR,COUNT,COUNTDISTINCT,GROUP_CONCAT,JSON_ARRAYAGG,JSON_OBJECTAGG,MAX,MIN,STD,STDDEV,STDDEV_POP,STDDEV_SAMP,SUM,VARIANCE,VAR_POP,VAR_SAMP,--',
@@ -122,7 +123,8 @@ export default defineNuxtConfig({
modules: [
'@pinia/nuxt',
'@pinia-plugin-persistedstate/nuxt',
- '@nuxtjs/i18n'
+ '@nuxtjs/i18n',
+ '@artmizu/nuxt-prometheus'
],
pinia: {
diff --git a/dbrepo-ui/package.json b/dbrepo-ui/package.json
index 2bbe6696bc2e59845e4d1d30194a860923f2760d..a1ed44b93a9887fbe98bfd878ea5dd9aaf628262 100644
--- a/dbrepo-ui/package.json
+++ b/dbrepo-ui/package.json
@@ -11,6 +11,7 @@
"prod": "bun run .output/server/index.mjs"
},
"dependencies": {
+ "@artmizu/nuxt-prometheus": "^2.4.0",
"@fontsource/open-sans": "^5.0.24",
"@mdi/font": "^7.4.47",
"@nuxtjs/robots": "^3.0.0",
diff --git a/docker-compose.yml b/docker-compose.yml
index 3fc6b972b1a8c556cf3ec79922b5a6595e0a99d9..6b412ac7d8153c3c75b166177252dc88e336f656 100644
--- a/docker-compose.yml
+++ b/docker-compose.yml
@@ -344,6 +344,8 @@ services:
condition: service_healthy
dbrepo-broker-service:
condition: service_healthy
+ dbrepo-dashboard-service:
+ condition: service_healthy
dbrepo-metadata-service:
condition: service_healthy
dbrepo-search-db:
@@ -353,22 +355,6 @@ services:
logging:
driver: json-file
- # service not part of dbrepo system (but for developing)
- dbrepo-search-db-dashboard:
- restart: "no"
- container_name: dbrepo-search-db-dashboard
- hostname: search-db-dashboard
- image: docker.io/opensearchproject/opensearch-dashboards:2.10.0
- ports:
- - "5601:5601"
- volumes:
- - ./dbrepo-search-db/opensearch_dashboards.yml:/usr/share/opensearch-dashboards/config/opensearch_dashboards.yml
- depends_on:
- dbrepo-search-db:
- condition: service_healthy
- logging:
- driver: json-file
-
dbrepo-identity-service:
restart: "no"
container_name: dbrepo-identity-service
@@ -420,12 +406,13 @@ services:
container_name: dbrepo-storage-service
hostname: storage-service
image: docker.io/chrislusf/seaweedfs:3.59
- command: [ "server", "-dir=/data", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9091" ]
+ command: [ "server", "-dir=/data", "-s3", "-s3.port=9000", "-s3.config=/app/s3_config.json", "-metricsPort=9090" ]
volumes:
- ./dbrepo-storage-service/s3_config.json:/app/s3_config.json
- storage-service-data:/data
ports:
- "9000:9000"
+ - "8888:8888"
healthcheck:
test: echo "cluster.check" | weed shell | grep "checking master.*ok" || exit 1
interval: 10s
@@ -434,6 +421,49 @@ services:
logging:
driver: json-file
+ dbrepo-metric-db:
+ restart: "no"
+ container_name: dbrepo-metric-db
+ hostname: metric-db
+ image: bitnami/prometheus:2.54.1-debian-12-r4
+ volumes:
+ - ./dbrepo-metric-db/prometheus.yml:/etc/prometheus/prometheus.yml
+ healthcheck:
+ test: promtool check healthy
+ interval: 10s
+ timeout: 5s
+ retries: 12
+ logging:
+ driver: json-file
+
+ dbrepo-dashboard-service:
+ restart: "no"
+ container_name: dbrepo-dashboard-service
+ hostname: dashboard-service
+ image: docker.io/bitnami/grafana:11.2.0-debian-12-r4
+ volumes:
+ - ./dbrepo-dashboard-service/dashboards:/app/dashboards
+ - ./dbrepo-dashboard-service/provisioning:/etc/grafana/provisioning
+ - ./dbrepo-dashboard-service/grafana.ini:/etc/grafana/grafana.ini
+ - ./dbrepo-dashboard-service/ldap.toml:/etc/grafana/ldap.toml
+ environment:
+ GF_SERVER_DOMAIN: "dashboard-service"
+ GF_SERVER_ROOT_URL: "${BASE_URL:-http://localhost}/dashboard/"
+ GF_SECURITY_DISABLE_INITIAL_ADMIN_CREATION: "true"
+ LDAP_ADMIN_USERNAME: "${IDENTITY_SERVICE_ADMIN_USERNAME:-admin}"
+ LDAP_ADMIN_PASSWORD: "${IDENTITY_SERVICE_ADMIN_PASSWORD:-admin}"
+ LDAP_ROOT: "${IDENTITY_SERVICE_ROOT:-dc=dbrepo,dc=at}"
+ healthcheck:
+ test: test -f /opt/bitnami/grafana/tmp/grafana.pid
+ interval: 10s
+ timeout: 5s
+ retries: 12
+ depends_on:
+ dbrepo-metric-db:
+ condition: service_started
+ logging:
+ driver: json-file
+
dbrepo-storage-service-init:
restart: "no"
container_name: dbrepo-storage-service-init
diff --git a/helm/dbrepo-mariadb-galera/templates/_names.tpl b/helm/dbrepo-mariadb-galera/templates/_names.tpl
new file mode 100644
index 0000000000000000000000000000000000000000..cea9dae390ea083c43da813edeefa5441c007f0e
--- /dev/null
+++ b/helm/dbrepo-mariadb-galera/templates/_names.tpl
@@ -0,0 +1,6 @@
+{{/*
+Allow the release namespace to be overridden for multi-namespace deployments in combined charts.
+*/}}
+{{- define "common.names.namespace" -}}
+{{- default .Release.Namespace .Values.namespaceOverride | trunc 63 | trimSuffix "-" -}}
+{{- end -}}
\ No newline at end of file
diff --git a/helm/dbrepo-mariadb-galera/values.schema.json b/helm/dbrepo-mariadb-galera/values.schema.json
index 9dbb1f01336e3ee40f404473191855d06a992c48..336e7dc1e5fb1f7455ebb7cea7593df6cd016a90 100644
--- a/helm/dbrepo-mariadb-galera/values.schema.json
+++ b/helm/dbrepo-mariadb-galera/values.schema.json
@@ -277,9 +277,6 @@
},
"type": "object"
},
- "namespace": {
- "type": "string"
- },
"s3": {
"properties": {
"auth": {
diff --git a/helm/dbrepo-mariadb-galera/values.yaml b/helm/dbrepo-mariadb-galera/values.yaml
index 2e8e94c72e593c0d2da52cf0fd35d3cb4277a703..f5026a3b5bdeb9f1ce83e1b4b79cb5e87bef6122 100644
--- a/helm/dbrepo-mariadb-galera/values.yaml
+++ b/helm/dbrepo-mariadb-galera/values.yaml
@@ -1,8 +1,7 @@
# Copyright the DBRepo developers
# SPDX-License-Identifier: APACHE-2.0
-## @param namespace The namespace to install the chart
-namespace: dbrepo
+## @param namespaceOverride The namespace to install the chart
s3:
endpoint: http://storage-service-s3:8333
diff --git a/helm/dbrepo/Chart.lock b/helm/dbrepo/Chart.lock
index 21f0b9d1972b91ad04e2ce681c8f97ca0ec18476..842d2c5ef663269a4574172661aba8d98d1b55f8 100644
--- a/helm/dbrepo/Chart.lock
+++ b/helm/dbrepo/Chart.lock
@@ -23,5 +23,11 @@ dependencies:
- name: openldap-stack-ha
repository: https://jp-gouin.github.io/helm-openldap/
version: 4.2.5
-digest: sha256:b25413b979bd026412ed188968db993c958bc71175b379315d5e24d373f8065f
-generated: "2024-09-14T01:52:39.203839653+04:00"
+- name: grafana
+ repository: https://charts.bitnami.com/bitnami
+ version: 11.3.20
+- name: prometheus
+ repository: https://charts.bitnami.com/bitnami
+ version: 1.3.22
+digest: sha256:8f67589f08da255fba018e5a8eec1c0ae736a5ee775d958eee9b45a5bda57f0a
+generated: "2024-09-27T09:21:08.969905261+02:00"
diff --git a/helm/dbrepo/Chart.yaml b/helm/dbrepo/Chart.yaml
index 517d649b8a023c2a232ca15e0d4cabdbf0ed3347..bf69c2237fbb3101631b80244a769a5031507e79 100644
--- a/helm/dbrepo/Chart.yaml
+++ b/helm/dbrepo/Chart.yaml
@@ -55,4 +55,14 @@ dependencies:
alias: identityservice
version: 4.2.5
repository: https://jp-gouin.github.io/helm-openldap/
- condition: identityservice.enabled
\ No newline at end of file
+ condition: identityservice.enabled
+ - name: grafana
+ alias: dashboardservice
+ version: 11.3.20
+ repository: https://charts.bitnami.com/bitnami
+ condition: dashboardservice.enabled
+ - name: prometheus
+ alias: metricdb
+ version: 1.3.22
+ repository: https://charts.bitnami.com/bitnami
+ condition: metricdb.enabled
\ No newline at end of file
diff --git a/helm/dbrepo/charts/dbrepo-mariadb-galera-1.4.6.tgz b/helm/dbrepo/charts/dbrepo-mariadb-galera-1.4.6.tgz
index 6729ba0a6c32d47f6710c8e81915c8726f4c3bde..986e13f7c5261495cfd9ea53ace6e263b0e3c2fa 100644
Binary files a/helm/dbrepo/charts/dbrepo-mariadb-galera-1.4.6.tgz and b/helm/dbrepo/charts/dbrepo-mariadb-galera-1.4.6.tgz differ
diff --git a/helm/dbrepo/charts/grafana-11.3.20.tgz b/helm/dbrepo/charts/grafana-11.3.20.tgz
new file mode 100644
index 0000000000000000000000000000000000000000..489481f1027c446bff9a60a9411eeda957d789ee
Binary files /dev/null and b/helm/dbrepo/charts/grafana-11.3.20.tgz differ
diff --git a/helm/dbrepo/charts/prometheus-1.3.22.tgz b/helm/dbrepo/charts/prometheus-1.3.22.tgz
new file mode 100644
index 0000000000000000000000000000000000000000..3d81a5e625af76257c1a7bc032e889005bc66607
Binary files /dev/null and b/helm/dbrepo/charts/prometheus-1.3.22.tgz differ
diff --git a/helm/dbrepo/files/mariadb.json b/helm/dbrepo/files/mariadb.json
new file mode 100644
index 0000000000000000000000000000000000000000..f53fe024185f6627f4b7fc592cca8135a9e03cd5
--- /dev/null
+++ b/helm/dbrepo/files/mariadb.json
@@ -0,0 +1,1377 @@
+{
+ "annotations": {
+ "list": [
+ {
+ "builtIn": 1,
+ "datasource": "-- Grafana --",
+ "enable": true,
+ "hide": true,
+ "iconColor": "rgba(0, 211, 255, 1)",
+ "name": "Annotations & Alerts",
+ "type": "dashboard"
+ }
+ ]
+ },
+ "description": "mariadb galera cluster overview. metrics from mysqld exporter.",
+ "editable": true,
+ "gnetId": 13106,
+ "graphTooltip": 0,
+ "id": null,
+ "iteration": 1601970485064,
+ "links": [],
+ "panels": [
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "custom": {
+ "align": null,
+ "filterable": false
+ },
+ "mappings": [
+ {
+ "from": "",
+ "id": 0,
+ "text": "UP",
+ "to": "",
+ "type": 1,
+ "value": "1"
+ },
+ {
+ "from": "",
+ "id": 1,
+ "text": "DOWN",
+ "to": "",
+ "type": 1,
+ "value": "0"
+ }
+ ],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 0
+ }
+ ]
+ }
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byType",
+ "options": "number"
+ },
+ "properties": [
+ {
+ "id": "custom.displayMode",
+ "value": "color-background"
+ },
+ {
+ "id": "thresholds",
+ "value": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "red",
+ "value": null
+ },
+ {
+ "color": "green",
+ "value": 1
+ }
+ ]
+ }
+ },
+ {
+ "id": "custom.width",
+ "value": 200
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 5,
+ "w": 12,
+ "x": 0,
+ "y": 0
+ },
+ "id": 2,
+ "options": {
+ "showHeader": true,
+ "sortBy": []
+ },
+ "pluginVersion": "7.2.0",
+ "targets": [
+ {
+ "expr": "mysql_up",
+ "format": "table",
+ "instant": true,
+ "interval": "",
+ "intervalFactor": 1,
+ "legendFormat": "",
+ "refId": "A"
+ }
+ ],
+ "timeFrom": null,
+ "timeShift": null,
+ "title": "Service Status",
+ "transformations": [
+ {
+ "id": "filterFieldsByName",
+ "options": {
+ "include": {
+ "names": [
+ "instance",
+ "Value"
+ ]
+ }
+ }
+ }
+ ],
+ "type": "table"
+ },
+ {
+ "datasource": "P18F45E9DC7E75912",
+ "fieldConfig": {
+ "defaults": {
+ "custom": {
+ "align": null,
+ "filterable": false
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+ "points": false,
+ "renderer": "flot",
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+ "steppedLine": false,
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+ "templating": {
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+ "hide": 0,
+ "label": "",
+ "name": "Filters",
+ "skipUrlSync": false,
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+ "time": {
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+ "to": "now"
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+ "timepicker": {},
+ "timezone": "",
+ "title": "Galera/MariaDB - Overview",
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+}
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diff --git a/helm/dbrepo/files/rabbitmq.json b/helm/dbrepo/files/rabbitmq.json
new file mode 100644
index 0000000000000000000000000000000000000000..a8db65695f2dfef0484ebd91fcb7401f31f9f70d
--- /dev/null
+++ b/helm/dbrepo/files/rabbitmq.json
@@ -0,0 +1,8165 @@
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+ "iconColor": "rgba(0, 211, 255, 1)",
+ "name": "Annotations & Alerts",
+ "target": {
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+ "matchAny": false,
+ "tags": [],
+ "type": "dashboard"
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+ "type": "dashboard"
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+ "properties": [
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+ "mode": "fixed"
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+ "min"
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+ "displayMode": "hidden",
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+ "tooltip": {
+ "mode": "multi"
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+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Messages published / s",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
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+ "custom": {
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+ "thresholds": {
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+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
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+ "pluginVersion": "8.3.4",
+ "targets": [
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+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Messages confirmed to publishers / s",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
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+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The rate of messages received from publishers and successfully routed to the master queue replicas.\n\n* [Queues](https://www.rabbitmq.com/queues.html)\n* [Publishers](https://www.rabbitmq.com/publishers.html)",
+ "fieldConfig": {
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+ "custom": {
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+ "axisPlacement": "auto",
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+ "gradientMode": "none",
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+ "viz": false
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+ "showPoints": "never",
+ "spanNulls": false,
+ "stacking": {
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+ "thresholdsStyle": {
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+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
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+ "pluginVersion": "8.3.4",
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+ "legendFormat": "{{rabbitmq_node}}",
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+ }
+ ],
+ "title": "Messages routed to queues / s",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The rate of messages received from publishers that have publisher confirms enabled and the broker has not confirmed yet.\n\n* [Publishers](https://www.rabbitmq.com/publishers.html)\n* [Confirms and Acknowledgements](https://www.rabbitmq.com/confirms.html)\n* [When Will Published Messages Be Confirmed by the Broker?](https://www.rabbitmq.com/confirms.html#when-publishes-are-confirmed)",
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+ "lineWidth": 1,
+ "pointSize": 5,
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?5(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#96D98D",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?6(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#FFEE52",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?7(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#8AB8FF",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?8(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#CA95E5",
+ "mode": "fixed"
+ }
+ }
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+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?9(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#FFB357",
+ "mode": "fixed"
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+ "w": 12,
+ "x": 0,
+ "y": 75
+ },
+ "id": 47,
+ "links": [],
+ "options": {
+ "legend": {
+ "calcs": [
+ "lastNotNull",
+ "max",
+ "min"
+ ],
+ "displayMode": "hidden",
+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
+ {
+ "expr": "rabbitmq_connections * on(instance, job) group_left(rabbitmq_cluster, rabbitmq_node) rabbitmq_identity_info{rabbitmq_cluster=\"$rabbitmq_cluster\", namespace=\"$namespace\"}",
+ "format": "time_series",
+ "instant": false,
+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Total connections",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The rate of new connections opened by clients. Connections are expected to be long-lived.\n\nLow sustained values above zero are to be expected. High rates may be indicative of connection churn or mass connection recovery.\n\n* [Connection Leak](https://www.rabbitmq.com/connections.html#monitoring)\n* [Connections](https://www.rabbitmq.com/connections.html)",
+ "fieldConfig": {
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+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "drawStyle": "line",
+ "fillOpacity": 100,
+ "gradientMode": "none",
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+ "tooltip": false,
+ "viz": false
+ },
+ "lineInterpolation": "linear",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "never",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "line+area"
+ }
+ },
+ "links": [],
+ "mappings": [],
+ "min": 0,
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "transparent",
+ "value": null
+ },
+ {
+ "color": "orange",
+ "value": 2
+ },
+ {
+ "color": "red",
+ "value": 10
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": [
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+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?0(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#56A64B",
+ "mode": "fixed"
+ }
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+ "matcher": {
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?1(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#F2CC0C",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
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+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?2(\\b|\\.)/"
+ },
+ "properties": [
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+ "id": "color",
+ "value": {
+ "fixedColor": "#3274D9",
+ "mode": "fixed"
+ }
+ }
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+ },
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+ "id": "byRegexp",
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+ },
+ "properties": [
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+ "id": "color",
+ "value": {
+ "fixedColor": "#A352CC",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?4(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#FF780A",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?5(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#96D98D",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?6(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#FFEE52",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?7(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#8AB8FF",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?8(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#CA95E5",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?9(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#FFB357",
+ "mode": "fixed"
+ }
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+ "w": 6,
+ "x": 12,
+ "y": 75
+ },
+ "id": 48,
+ "links": [],
+ "options": {
+ "legend": {
+ "calcs": [
+ "lastNotNull",
+ "max",
+ "min"
+ ],
+ "displayMode": "hidden",
+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
+ {
+ "expr": "sum(rate(rabbitmq_connections_opened_total[60s]) * on(instance, job) group_left(rabbitmq_cluster, rabbitmq_node) rabbitmq_identity_info{rabbitmq_cluster=\"$rabbitmq_cluster\", namespace=\"$namespace\"}) by(rabbitmq_node)",
+ "format": "time_series",
+ "instant": false,
+ "interval": "",
+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Connections opened / s",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "description": "The rate of connections closed. Connections are expected to be long-lived.\n\nLow sustained values above zero are to be expected. High rates may be indicative of connection churn or mass connection recovery.\n\n* [Connections](https://www.rabbitmq.com/connections.html)",
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "drawStyle": "line",
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+ "gradientMode": "none",
+ "hideFrom": {
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+ "tooltip": false,
+ "viz": false
+ },
+ "lineInterpolation": "linear",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "never",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "line+area"
+ }
+ },
+ "links": [],
+ "mappings": [],
+ "min": 0,
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "transparent",
+ "value": null
+ },
+ {
+ "color": "orange",
+ "value": 2
+ },
+ {
+ "color": "red",
+ "value": 10
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?0(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#56A64B",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
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+ "matcher": {
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?1(\\b|\\.)/"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#F2CC0C",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byRegexp",
+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?2(\\b|\\.)/"
+ },
+ "properties": [
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+ "value": {
+ "fixedColor": "#3274D9",
+ "mode": "fixed"
+ }
+ }
+ ]
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?3(\\b|\\.)/"
+ },
+ "properties": [
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+ "value": {
+ "fixedColor": "#A352CC",
+ "mode": "fixed"
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?4(\\b|\\.)/"
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+ "mode": "fixed"
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+ "mode": "fixed"
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+ "mode": "fixed"
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?8(\\b|\\.)/"
+ },
+ "properties": [
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+ "id": "color",
+ "value": {
+ "fixedColor": "#CA95E5",
+ "mode": "fixed"
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+ "options": "/^rabbit@[a-zA-Z\\.\\-]*?9(\\b|\\.)/"
+ },
+ "properties": [
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+ "id": "color",
+ "value": {
+ "fixedColor": "#FFB357",
+ "mode": "fixed"
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+ "w": 6,
+ "x": 18,
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+ "id": 49,
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+ "options": {
+ "legend": {
+ "calcs": [
+ "lastNotNull",
+ "max",
+ "min"
+ ],
+ "displayMode": "hidden",
+ "placement": "bottom"
+ },
+ "tooltip": {
+ "mode": "multi"
+ }
+ },
+ "pluginVersion": "8.3.4",
+ "targets": [
+ {
+ "expr": "sum(rate(rabbitmq_connections_closed_total[60s]) * on(instance, job) group_left(rabbitmq_cluster, rabbitmq_node) rabbitmq_identity_info{rabbitmq_cluster=\"$rabbitmq_cluster\", namespace=\"$namespace\"}) by(rabbitmq_node)",
+ "format": "time_series",
+ "instant": false,
+ "intervalFactor": 1,
+ "legendFormat": "{{rabbitmq_node}}",
+ "refId": "A"
+ }
+ ],
+ "title": "Connections closed / s",
+ "type": "timeseries"
+ }
+ ],
+ "refresh": "15s",
+ "schemaVersion": 34,
+ "style": "dark",
+ "tags": ["provisioned", "rabbitmq"],
+ "templating": {
+ "list": [
+ {
+ "current": {
+ "selected": false,
+ "text": "default",
+ "value": "default"
+ },
+ "datasource": "PBFA97CFB590B2093",
+ "hide": 2,
+ "includeAll": false,
+ "label": "datasource",
+ "multi": false,
+ "name": "DS_PROMETHEUS",
+ "options": [],
+ "query": "prometheus",
+ "refresh": 1,
+ "regex": "",
+ "skipUrlSync": false,
+ "type": "datasource"
+ },
+ {
+ "current": {},
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "definition": "label_values(rabbitmq_identity_info, namespace)",
+ "hide": 0,
+ "includeAll": false,
+ "label": "Namespace",
+ "multi": false,
+ "name": "namespace",
+ "options": [],
+ "query": {
+ "query": "label_values(rabbitmq_identity_info, namespace)",
+ "refId": "Prometheus-namespace-Variable-Query"
+ },
+ "refresh": 2,
+ "regex": "",
+ "skipUrlSync": false,
+ "sort": 1,
+ "tagValuesQuery": "",
+ "tagsQuery": "",
+ "type": "query",
+ "useTags": false
+ },
+ {
+ "current": {},
+ "datasource": {
+ "type": "prometheus",
+ "uid": "${DS_PROMETHEUS}"
+ },
+ "definition": "label_values(rabbitmq_identity_info{namespace=\"$namespace\"}, rabbitmq_cluster)",
+ "hide": 0,
+ "includeAll": false,
+ "label": "RabbitMQ Cluster",
+ "multi": false,
+ "name": "rabbitmq_cluster",
+ "options": [],
+ "query": {
+ "query": "label_values(rabbitmq_identity_info{namespace=\"$namespace\"}, rabbitmq_cluster)",
+ "refId": "Prometheus-rabbitmq_cluster-Variable-Query"
+ },
+ "refresh": 2,
+ "regex": "",
+ "skipUrlSync": false,
+ "sort": 1,
+ "tagValuesQuery": "",
+ "tagsQuery": "",
+ "type": "query",
+ "useTags": false
+ }
+ ]
+ },
+ "time": {
+ "from": "now-15m",
+ "to": "now"
+ },
+ "timepicker": {
+ "refresh_intervals": [
+ "15s",
+ "30s",
+ "1m",
+ "5m",
+ "10m"
+ ],
+ "time_options": [
+ "5m",
+ "15m",
+ "1h",
+ "6h",
+ "12h",
+ "24h",
+ "2d",
+ "7d",
+ "30d"
+ ]
+ },
+ "timezone": "",
+ "title": "RabbitMQ - Overview",
+ "uid": "Kn5xm-gZk",
+ "version": 20220805,
+ "weekStart": "",
+ "gnetId": 10991
+}
\ No newline at end of file
diff --git a/helm/dbrepo/files/system.json b/helm/dbrepo/files/system.json
new file mode 100644
index 0000000000000000000000000000000000000000..75287d5a0353df5aa77f82ee361888fe00274ef8
--- /dev/null
+++ b/helm/dbrepo/files/system.json
@@ -0,0 +1,1215 @@
+{
+ "annotations": {
+ "list": [
+ {
+ "builtIn": 1,
+ "datasource": {
+ "type": "grafana",
+ "uid": "-- Grafana --"
+ },
+ "enable": true,
+ "hide": true,
+ "iconColor": "rgba(0, 211, 255, 1)",
+ "name": "Annotations & Alerts",
+ "type": "dashboard"
+ }
+ ]
+ },
+ "editable": true,
+ "fiscalYearStartMonth": 0,
+ "graphTooltip": 1,
+ "links": [
+ {
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+ "icon": "external link",
+ "includeVars": false,
+ "keepTime": false,
+ "tags": [],
+ "targetBlank": false,
+ "title": "Docs",
+ "tooltip": "",
+ "type": "link",
+ "url": "https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/"
+ }
+ ],
+ "panels": [
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+ "gridPos": {
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+ "w": 24,
+ "x": 0,
+ "y": 0
+ },
+ "id": 3,
+ "panels": [],
+ "title": "Overview",
+ "type": "row"
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+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
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+ "fieldConfig": {
+ "defaults": {
+ "mappings": [],
+ "thresholds": {
+ "mode": "percentage",
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+ "value": null
+ },
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+ },
+ {
+ "color": "orange",
+ "value": 60
+ },
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+ "value": 80
+ },
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+ "color": "green",
+ "value": 100
+ }
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+ "unit": "percentunit"
+ },
+ "overrides": []
+ },
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+ "w": 3,
+ "x": 0,
+ "y": 1
+ },
+ "id": 9,
+ "options": {
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+ "graphMode": "none",
+ "justifyMode": "auto",
+ "orientation": "auto",
+ "percentChangeColorMode": "standard",
+ "reduceOptions": {
+ "calcs": [
+ "lastNotNull"
+ ],
+ "fields": "",
+ "values": false
+ },
+ "showPercentChange": false,
+ "textMode": "auto",
+ "wideLayout": true
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
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+ "editorMode": "code",
+ "expr": "sum(up)/count(up)",
+ "fullMetaSearch": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "Services Running",
+ "range": true,
+ "refId": "A",
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+ }
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+ },
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+ "w": 24,
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+ "y": 4
+ },
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+ "panels": [],
+ "title": "Data",
+ "type": "row"
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+ {
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+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "displayName": "Databases",
+ "mappings": [],
+ "thresholds": {
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+ "overrides": []
+ },
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+ "w": 5,
+ "x": 0,
+ "y": 5
+ },
+ "id": 4,
+ "options": {
+ "colorMode": "background",
+ "graphMode": "none",
+ "justifyMode": "auto",
+ "orientation": "auto",
+ "percentChangeColorMode": "standard",
+ "reduceOptions": {
+ "calcs": [
+ "lastNotNull"
+ ],
+ "fields": "",
+ "values": false
+ },
+ "showPercentChange": false,
+ "textMode": "auto",
+ "wideLayout": true
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "dbrepo_database_count",
+ "fullMetaSearch": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "__auto",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
+ ],
+ "type": "stat"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "displayName": "Datasources",
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "blue",
+ "value": null
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": []
+ },
+ "gridPos": {
+ "h": 3,
+ "w": 5,
+ "x": 5,
+ "y": 5
+ },
+ "id": 5,
+ "options": {
+ "colorMode": "background",
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+ "calcs": [
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+ "fields": "",
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+ "showPercentChange": false,
+ "textMode": "auto",
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+ "pluginVersion": "11.2.0",
+ "targets": [
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+ "editorMode": "builder",
+ "expr": "dbrepo_view_count",
+ "fullMetaSearch": false,
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+ "instant": false,
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+ "range": true,
+ "refId": "Views",
+ "useBackend": false
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+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
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+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "dbrepo_subset_count",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "__auto",
+ "range": true,
+ "refId": "Subsets",
+ "useBackend": false
+ },
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+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "dbrepo_table_count",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "__auto",
+ "range": true,
+ "refId": "Tables",
+ "useBackend": false
+ }
+ ],
+ "transformations": [
+ {
+ "id": "calculateField",
+ "options": {
+ "alias": "",
+ "mode": "reduceRow",
+ "reduce": {
+ "reducer": "sum"
+ },
+ "replaceFields": true
+ }
+ }
+ ],
+ "type": "stat"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "displayName": "Volume",
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
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+ "color": "blue",
+ "value": null
+ }
+ ]
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+ "unit": "decbytes"
+ },
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+ "w": 5,
+ "x": 10,
+ "y": 5
+ },
+ "id": 8,
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+ "graphMode": "none",
+ "justifyMode": "auto",
+ "orientation": "auto",
+ "percentChangeColorMode": "standard",
+ "reduceOptions": {
+ "calcs": [
+ "lastNotNull"
+ ],
+ "fields": "",
+ "values": false
+ },
+ "showPercentChange": false,
+ "textMode": "auto",
+ "wideLayout": true
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
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+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
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+ "editorMode": "builder",
+ "expr": "dbrepo_volume_sum",
+ "fullMetaSearch": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "__auto",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
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+ "type": "stat"
+ },
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+ "gridPos": {
+ "h": 1,
+ "w": 24,
+ "x": 0,
+ "y": 8
+ },
+ "id": 2,
+ "panels": [],
+ "title": "Services",
+ "type": "row"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
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+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 25,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "linear",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "auto",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 80
+ }
+ ]
+ }
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "broker-service:15692"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "light-blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "analyse-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "super-light-red",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service-metrics:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "green",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "data-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "search-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "semi-dark-purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "ui:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "super-light-purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 9
+ },
+ "id": 1,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "up",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
+ ],
+ "title": "Service Instances Running",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 25,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "smooth",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "auto",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 80
+ }
+ ]
+ }
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "data-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 15
+ },
+ "id": 6,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "multi",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "process_cpu_usage",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": true,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "Java",
+ "useBackend": false
+ }
+ ],
+ "title": "CPU Usage",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "description": "Heap and non-heap memory summed",
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 25,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "linear",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "auto",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "normal"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ }
+ ]
+ },
+ "unit": "decbytes"
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "auth-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "data-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:8080"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "metadata-service:80"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "blue",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 21
+ },
+ "id": 7,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "11.2.0",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "disableTextWrap": false,
+ "editorMode": "builder",
+ "expr": "sum by(instance) (jvm_memory_used_bytes)",
+ "fullMetaSearch": false,
+ "hide": false,
+ "includeNullMetadata": false,
+ "instant": false,
+ "legendFormat": "{{instance}}",
+ "range": true,
+ "refId": "A",
+ "useBackend": false
+ }
+ ],
+ "title": "JVM Memory Usage",
+ "type": "timeseries"
+ },
+ {
+ "datasource": {
+ "default": true,
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "fieldConfig": {
+ "defaults": {
+ "color": {
+ "mode": "palette-classic"
+ },
+ "custom": {
+ "axisBorderShow": false,
+ "axisCenteredZero": false,
+ "axisColorMode": "text",
+ "axisLabel": "",
+ "axisPlacement": "auto",
+ "barAlignment": 0,
+ "barWidthFactor": 0.6,
+ "drawStyle": "line",
+ "fillOpacity": 10,
+ "gradientMode": "none",
+ "hideFrom": {
+ "legend": false,
+ "tooltip": false,
+ "viz": false
+ },
+ "insertNulls": false,
+ "lineInterpolation": "smooth",
+ "lineWidth": 1,
+ "pointSize": 5,
+ "scaleDistribution": {
+ "type": "linear"
+ },
+ "showPoints": "never",
+ "spanNulls": false,
+ "stacking": {
+ "group": "A",
+ "mode": "none"
+ },
+ "thresholdsStyle": {
+ "mode": "off"
+ }
+ },
+ "links": [],
+ "mappings": [],
+ "thresholds": {
+ "mode": "absolute",
+ "steps": [
+ {
+ "color": "green",
+ "value": null
+ },
+ {
+ "color": "red",
+ "value": 80
+ }
+ ]
+ },
+ "unit": "short"
+ },
+ "overrides": [
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "400"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "orange",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "500"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "#BF1B00",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "-1"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "purple",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "200"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "green",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "302"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "light-yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "304"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "super-light-yellow",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "401"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "light-orange",
+ "mode": "fixed"
+ }
+ }
+ ]
+ },
+ {
+ "matcher": {
+ "id": "byName",
+ "options": "499"
+ },
+ "properties": [
+ {
+ "id": "color",
+ "value": {
+ "fixedColor": "red",
+ "mode": "fixed"
+ }
+ }
+ ]
+ }
+ ]
+ },
+ "gridPos": {
+ "h": 6,
+ "w": 24,
+ "x": 0,
+ "y": 27
+ },
+ "id": 13,
+ "options": {
+ "legend": {
+ "calcs": [],
+ "displayMode": "list",
+ "placement": "bottom",
+ "showLegend": true
+ },
+ "tooltip": {
+ "mode": "single",
+ "sort": "none"
+ }
+ },
+ "pluginVersion": "8.1.0-pre",
+ "targets": [
+ {
+ "datasource": {
+ "type": "prometheus",
+ "uid": "P18F45E9DC7E75912"
+ },
+ "editorMode": "code",
+ "expr": "sum by (status_code) (irate(grafana_http_request_duration_seconds_count[5m]))",
+ "format": "time_series",
+ "intervalFactor": 3,
+ "legendFormat": "{{status_code}}",
+ "range": true,
+ "refId": "B",
+ "step": 15,
+ "target": "dev.grafana.cb-office.alerting.active_alerts"
+ }
+ ],
+ "title": "Dashboard Service HTTP Status Codes",
+ "type": "timeseries"
+ }
+ ],
+ "refresh": "10s",
+ "schemaVersion": 39,
+ "tags": ["provisioned", "dbrepo"],
+ "templating": {
+ "list": []
+ },
+ "time": {
+ "from": "now-15m",
+ "to": "now"
+ },
+ "timepicker": {},
+ "timezone": "browser",
+ "title": "DBRepo - Overview",
+ "uid": "bdz20owu8zn5se",
+ "version": 1,
+ "weekStart": ""
+}
\ No newline at end of file
diff --git a/helm/dbrepo/templates/_names.tpl b/helm/dbrepo/templates/_names.tpl
new file mode 100644
index 0000000000000000000000000000000000000000..cea9dae390ea083c43da813edeefa5441c007f0e
--- /dev/null
+++ b/helm/dbrepo/templates/_names.tpl
@@ -0,0 +1,6 @@
+{{/*
+Allow the release namespace to be overridden for multi-namespace deployments in combined charts.
+*/}}
+{{- define "common.names.namespace" -}}
+{{- default .Release.Namespace .Values.namespaceOverride | trunc 63 | trimSuffix "-" -}}
+{{- end -}}
\ No newline at end of file
diff --git a/helm/dbrepo/templates/analyse-deployment.yaml b/helm/dbrepo/templates/analyse-deployment.yaml
index 68d43e9cee8cab5e4f2073c3e23965e87f9197fe..3adf32f77840cfe588d58d8a7202adc4681e6d7d 100644
--- a/helm/dbrepo/templates/analyse-deployment.yaml
+++ b/helm/dbrepo/templates/analyse-deployment.yaml
@@ -4,7 +4,7 @@ apiVersion: apps/v1
kind: Deployment
metadata:
name: analyse-service
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
app: analyse-service
service: analyse-service
@@ -45,15 +45,15 @@ spec:
- -ec
- "curl -sSL localhost:8080/health | grep 'UP' || exit 1"
initialDelaySeconds: 120
- periodSeconds: 30
+ periodSeconds: 10
readinessProbe:
exec:
command:
- /bin/bash
- -ec
- "curl -sSL localhost:8080/health | grep 'UP' || exit 1"
- initialDelaySeconds: 10
- periodSeconds: 30
+ initialDelaySeconds: 30
+ periodSeconds: 10
{{- if .Values.analyseservice.resources }}
resources: {{- toYaml .Values.analyseservice.resources | nindent 12 }}
{{- end }}
diff --git a/helm/dbrepo/templates/analyse-secret.yaml b/helm/dbrepo/templates/analyse-secret.yaml
index 2b8b78dbd5a14ed01f5f21d0e3aabaa25b518c36..49aa8938296b07342350f9749d9b62d078acbdb9 100644
--- a/helm/dbrepo/templates/analyse-secret.yaml
+++ b/helm/dbrepo/templates/analyse-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: analyse-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
ADMIN_USERNAME: "{{ .Values.identityservice.users }}"
ADMIN_PASSWORD: "{{ .Values.identityservice.userPasswords }}"
diff --git a/helm/dbrepo/templates/analyse-service.yaml b/helm/dbrepo/templates/analyse-service.yaml
index 98720e3e4656c8fd80f1fff35b27a02846371cd1..0f9ac322d99310e0766df792f1b28c06f2477c4f 100644
--- a/helm/dbrepo/templates/analyse-service.yaml
+++ b/helm/dbrepo/templates/analyse-service.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Service
metadata:
name: analyse-service
- namespace: {{ $.Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
service: analyse-service
spec:
diff --git a/helm/dbrepo/templates/auth-configmap.yaml b/helm/dbrepo/templates/auth-configmap.yaml
index 948b31e77d83cf289162f3dad5401b374f2e589a..557d99072513ec0330848d467db2501982853c0e 100644
--- a/helm/dbrepo/templates/auth-configmap.yaml
+++ b/helm/dbrepo/templates/auth-configmap.yaml
@@ -3,7 +3,7 @@ apiVersion: v1
kind: ConfigMap
metadata:
name: auth-service-config
- namespace: {{ $.Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
data:
KC_HOSTNAME_PATH: "/api/auth"
KC_HOSTNAME_ADMIN_URL: "{{ .Values.gateway }}/api/auth"
@@ -2287,20 +2287,20 @@ data:
"fullSyncPeriod" : [ "-1" ],
"pagination" : [ "false" ],
"startTls" : [ "false" ],
- "usersDn" : [ "ou=users,dc=dbrepo,dc=at" ],
+ "usersDn" : [ "ou=users,{{ .Values.identityservice.global.ldapDomain }}" ],
"connectionPooling" : [ "true" ],
"cachePolicy" : [ "DEFAULT" ],
"useKerberosForPasswordAuthentication" : [ "false" ],
"importEnabled" : [ "true" ],
"enabled" : [ "true" ],
- "bindDn" : [ "cn=admin,dc=dbrepo,dc=at" ],
- "bindCredential" : [ "admin" ],
+ "bindDn" : [ "cn={{ .Values.identityservice.global.adminUser }},{{ .Values.identityservice.global.ldapDomain }}" ],
+ "bindCredential" : [ "{{ .Values.identityservice.global.adminPassword }}" ],
"usernameLDAPAttribute" : [ "uid" ],
"changedSyncPeriod" : [ "-1" ],
"lastSync" : [ "1719252666" ],
"vendor" : [ "other" ],
"uuidLDAPAttribute" : [ "entryUUID" ],
- "connectionUrl" : [ "ldap://identity-service:1389" ],
+ "connectionUrl" : [ "ldap://identity-service:389" ],
"allowKerberosAuthentication" : [ "false" ],
"syncRegistrations" : [ "true" ],
"authType" : [ "simple" ],
diff --git a/helm/dbrepo/templates/broker-secret.yaml b/helm/dbrepo/templates/broker-secret.yaml
index 4348be52896a8cb09672379ed10cf746803651e8..7a207d4bcd6db8486408361cf816aa169b8357cb 100644
--- a/helm/dbrepo/templates/broker-secret.yaml
+++ b/helm/dbrepo/templates/broker-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: broker-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
advanced.config: |
[
diff --git a/helm/dbrepo/templates/dashboard-configmap.yaml b/helm/dbrepo/templates/dashboard-configmap.yaml
new file mode 100644
index 0000000000000000000000000000000000000000..9643f539d2ae7b4aec491f1ba7b73b9202daa85f
--- /dev/null
+++ b/helm/dbrepo/templates/dashboard-configmap.yaml
@@ -0,0 +1,11 @@
+{{- if .Values.dashboardservice.enabled }}
+apiVersion: v1
+kind: ConfigMap
+metadata:
+ name: dashboard-service-config
+ namespace: {{ include "common.names.namespace" . | quote }}
+data:
+ {{ (.Files.Glob "files/system.json").AsConfig | nindent 2 }}
+ {{ (.Files.Glob "files/rabbitmq.json").AsConfig | nindent 2 }}
+ {{ (.Files.Glob "files/mariadb.json").AsConfig | nindent 2 }}
+{{- end }}
\ No newline at end of file
diff --git a/helm/dbrepo/templates/dashboard-secret.yaml b/helm/dbrepo/templates/dashboard-secret.yaml
new file mode 100644
index 0000000000000000000000000000000000000000..6e5a05e1768a8faffb0841429ddd2ea5dd315bc3
--- /dev/null
+++ b/helm/dbrepo/templates/dashboard-secret.yaml
@@ -0,0 +1,55 @@
+{{- if .Values.dashboardservice.enabled }}
+---
+apiVersion: v1
+kind: Secret
+metadata:
+ name: dashboard-service-secret
+ namespace: {{ include "common.names.namespace" . | quote }}
+stringData:
+ GF_SERVER_DOMAIN: "dashboard-service"
+ GF_SERVER_ROOT_URL: "http://dashboard-service:3000/dashboard/"
+ GF_SERVER_SERVE_FROM_SUB_PATH: "true"
+ GF_SECURITY_DISABLE_INITIAL_ADMIN_CREATION: "true"
+ LDAP_ADMIN_USERNAME: "{{ .Values.identityservice.global.adminUser }}"
+ LDAP_ADMIN_PASSWORD: "{{ .Values.identityservice.global.adminPassword }}"
+ LDAP_ROOT: "{{ .Values.identityservice.global.ldapDomain }}"
+ ldap.toml: |
+ [[servers]]
+ host = "identity-service"
+ port = 389
+ use_ssl = false
+
+ # Search user bind dn
+ bind_dn = "cn=${LDAP_ADMIN_USERNAME},${LDAP_ROOT}"
+ bind_password = "${LDAP_ADMIN_PASSWORD}"
+
+ # Timeout in seconds. Applies to each host specified in the 'host' entry (space separated).
+ timeout = 10
+
+ # User search filter, for example "(cn=%s)" or "(sAMAccountName=%s)" or "(uid=%s)"
+ # Allow login from email or username, example "(|(sAMAccountName=%s)(userPrincipalName=%s))"
+ search_filter = "(cn=%s)"
+
+ # An array of base dns to search through
+ search_base_dns = ["${LDAP_ROOT}"]
+
+ group_search_base_dns = ["ou=users,${LDAP_ROOT}"]
+ group_search_filter = "(&(objectClass=groupOfNames)(member=cn=%s,ou=users,${LDAP_ROOT}))"
+ group_search_filter_user_attribute = "uid"
+
+ [servers.attributes]
+ name = "givenName"
+ surname = "sn"
+ username = "cn"
+ member_of = "member"
+ email = "email"
+
+ [[servers.group_mappings]]
+ group_dn = "cn=${LDAP_ADMIN_USERNAME},ou=users,${LDAP_ROOT}"
+ org_role = "Admin"
+ grafana_admin = true
+
+ [[servers.group_mappings]]
+ group_dn = "*"
+ org_role = "Viewer"
+{{- end }}
diff --git a/helm/dbrepo/templates/data-db-secret.yaml b/helm/dbrepo/templates/data-db-secret.yaml
index 100c1ce82c5ce7aa3da112a83a1af4b8825105ef..e12d638ac98abdba410c4091ece9bc237bd07e92 100644
--- a/helm/dbrepo/templates/data-db-secret.yaml
+++ b/helm/dbrepo/templates/data-db-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: data-db-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
S3_ACCESS_KEY_ID: "{{ .Values.storageservice.s3.auth.adminAccessKeyId }}"
S3_SECRET_ACCESS_KEY: "{{ .Values.storageservice.s3.auth.adminSecretAccessKey }}"
diff --git a/helm/dbrepo/templates/data-deployment.yaml b/helm/dbrepo/templates/data-deployment.yaml
index 1d9e2352bd080702d61f94cf32915cba841293ad..fae3250738ef0952f974a2ec1fa4498c03f9d231 100644
--- a/helm/dbrepo/templates/data-deployment.yaml
+++ b/helm/dbrepo/templates/data-deployment.yaml
@@ -4,7 +4,7 @@ apiVersion: apps/v1
kind: Deployment
metadata:
name: data-service
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
app: data-service
service: data-service
@@ -45,7 +45,7 @@ spec:
- -ec
- "curl -sSL localhost:8080/actuator/health/readiness | grep 'UP' || exit 1"
initialDelaySeconds: 120
- periodSeconds: 30
+ periodSeconds: 10
readinessProbe:
exec:
command:
@@ -53,7 +53,7 @@ spec:
- -ec
- "curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1"
initialDelaySeconds: 30
- periodSeconds: 30
+ periodSeconds: 10
{{- if .Values.dataservice.resources }}
resources: {{- toYaml .Values.dataservice.resources | nindent 12 }}
{{- end }}
diff --git a/helm/dbrepo/templates/data-secret.yaml b/helm/dbrepo/templates/data-secret.yaml
index 52740b930db06675e6069ef400ea1d44a3dbddc1..dd40e3e649ab6b679510871184e4ee7e09d11c31 100644
--- a/helm/dbrepo/templates/data-secret.yaml
+++ b/helm/dbrepo/templates/data-secret.yaml
@@ -3,7 +3,7 @@ apiVersion: v1
kind: Secret
metadata:
name: data-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
ADMIN_EMAIL: "{{ .Values.metadataservice.admin.email }}"
AUTH_SERVICE_ADMIN: "{{ .Values.authservice.auth.adminUser }}"
diff --git a/helm/dbrepo/templates/data-service.yaml b/helm/dbrepo/templates/data-service.yaml
index 279ce21f48fcc6727ac307e0abf6619cdcd9efcb..17fed741d6193f80f930f2118dbb5d59e396278f 100644
--- a/helm/dbrepo/templates/data-service.yaml
+++ b/helm/dbrepo/templates/data-service.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Service
metadata:
name: data-service
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
service: data-service
spec:
diff --git a/helm/dbrepo/templates/ingress.yaml b/helm/dbrepo/templates/ingress.yaml
index b2cc8d0d507094d26a00664b36c0c79684c9e54f..364416c1a43c192d2993e6f17b39ec43cd8d9095 100644
--- a/helm/dbrepo/templates/ingress.yaml
+++ b/helm/dbrepo/templates/ingress.yaml
@@ -4,7 +4,7 @@ kind: Ingress
metadata:
name: dbrepo-ingress-basic
annotations: {{ toYaml .Values.ingress.annotations.basic | nindent 4 }}
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
ingressClassName: {{ .Values.ingress.className }}
{{- if .Values.ingress.tls.enabled }}
@@ -157,6 +157,13 @@ spec:
name: upload-service
port:
number: 80
+ - path: /dashboard
+ pathType: Prefix
+ backend:
+ service:
+ name: dashboard-service
+ port:
+ number: 3000
- path: /
pathType: Prefix
backend:
@@ -170,7 +177,7 @@ kind: Ingress
metadata:
name: dbrepo-ingress-admin
annotations: {{ toYaml .Values.ingress.annotations.rewriteApi | nindent 4 }}
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
ingressClassName: {{ .Values.ingress.className }}
{{- if .Values.ingress.tls.enabled }}
@@ -196,7 +203,7 @@ kind: Ingress
metadata:
name: dbrepo-ingress-rewrite-root
annotations: {{ toYaml .Values.ingress.annotations.rewriteRoot | nindent 4 }}
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
ingressClassName: {{ .Values.ingress.className }}
{{- if .Values.ingress.tls.enabled }}
@@ -222,7 +229,7 @@ kind: Ingress
metadata:
name: dbrepo-ingress-rewrite-root-secure
annotations: {{ toYaml .Values.ingress.annotations.rewriteRootSecure | nindent 4 }}
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
ingressClassName: {{ .Values.ingress.className }}
{{- if .Values.ingress.tls.enabled }}
@@ -248,7 +255,7 @@ kind: Ingress
metadata:
name: dbrepo-ingress-pid
annotations: {{ toYaml .Values.ingress.annotations.rewritePid | nindent 4 }}
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
ingressClassName: {{ .Values.ingress.className }}
{{- if .Values.ingress.tls.enabled }}
diff --git a/helm/dbrepo/templates/metadata-configmap.yaml b/helm/dbrepo/templates/metadata-configmap.yaml
index 9fd137bb39201b6149f5cce21c5c37c0f7ad6b20..93919ed2a11a70442a643f7348bfca22a58f8890 100644
--- a/helm/dbrepo/templates/metadata-configmap.yaml
+++ b/helm/dbrepo/templates/metadata-configmap.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: ConfigMap
metadata:
name: metadata-db-setup
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
data:
{{- with .Values.metadatadb.extraInitDbScripts }}
{{ toYaml . | nindent 2 }}
@@ -44,10 +44,12 @@ data:
dialect character varying(255) NOT NULL,
driver_class character varying(255) NOT NULL,
jdbc_method character varying(255) NOT NULL,
+ is_default BOOLEAN NOT NULL DEFAULT FALSE,
created timestamp NOT NULL DEFAULT NOW(),
last_modified timestamp,
PRIMARY KEY (id),
- UNIQUE (name, version)
+ UNIQUE (name, version),
+ UNIQUE (is_default)
) WITH SYSTEM VERSIONING;
CREATE TABLE IF NOT EXISTS `mdb_images_date`
@@ -81,6 +83,7 @@ data:
last_modified timestamp,
privileged_username character varying(255) NOT NULL,
privileged_password character varying(255) NOT NULL,
+ quota integer NOT NULL DEFAULT 50,
PRIMARY KEY (id),
FOREIGN KEY (image_id) REFERENCES mdb_images (id)
) WITH SYSTEM VERSIONING;
@@ -266,6 +269,7 @@ data:
cid BIGINT NOT NULL,
rcid BIGINT NOT NULL,
PRIMARY KEY (id),
+ UNIQUE (fkid, cid, rcid),
FOREIGN KEY (fkid) REFERENCES mdb_constraints_foreign_key (fkid) ON UPDATE CASCADE,
FOREIGN KEY (cid) REFERENCES mdb_columns (id),
FOREIGN KEY (rcid) REFERENCES mdb_columns (id)
@@ -555,7 +559,8 @@ data:
VALUES (1, '%Y-%c-%d %H:%i:%S.%f', 'yyyy-MM-dd HH:mm:ss.SSSSSS', '2022-01-30 13:44:25.499', true),
(1, '%Y-%c-%d %H:%i:%S', 'yyyy-MM-dd HH:mm:ss', '2022-01-30 13:44:25', true),
(1, '%Y-%c-%d', 'yyyy-MM-dd', '2022-01-30', false),
- (1, '%H:%i:%S', 'HH:mm:ss', '13:44:25', true);
+ (1, '%H:%i:%S', 'HH:mm:ss', '13:44:25', true),
+ (1, '%d.%c.%Y', 'dd.MM.yyyy', '30.01.2022', false);
INSERT INTO `mdb_ontologies` (prefix, uri, uri_pattern, sparql_endpoint, rdf_path)
VALUES ('om', 'http://www.ontology-of-units-of-measure.org/resource/om-2/',
diff --git a/helm/dbrepo/templates/metadata-deployment.yaml b/helm/dbrepo/templates/metadata-deployment.yaml
index 4d16efb68bc6987c71b551311d83a2bffe819be5..46c96a331d55d330054cff0d43b7e956f816762c 100644
--- a/helm/dbrepo/templates/metadata-deployment.yaml
+++ b/helm/dbrepo/templates/metadata-deployment.yaml
@@ -4,7 +4,7 @@ apiVersion: apps/v1
kind: Deployment
metadata:
name: metadata-service
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
app: metadata-service
service: metadata-service
@@ -45,7 +45,7 @@ spec:
- -ec
- "curl -sSL localhost:8080/actuator/health/readiness | grep 'UP' || exit 1"
initialDelaySeconds: 120
- periodSeconds: 30
+ periodSeconds: 10
readinessProbe:
exec:
command:
@@ -53,7 +53,7 @@ spec:
- -ec
- "curl -sSL localhost:8080/actuator/health/liveness | grep 'UP' || exit 1"
initialDelaySeconds: 30
- periodSeconds: 30
+ periodSeconds: 10
{{- if .Values.metadataservice.resources }}
resources: {{- toYaml .Values.metadataservice.resources | nindent 12 }}
{{- end }}
diff --git a/helm/dbrepo/templates/metadata-secret.yaml b/helm/dbrepo/templates/metadata-secret.yaml
index 0718b02ea1f7ed10d4a53d9d93e04ce985104bb1..684adf0269b687199b84e59623624180643bc9b9 100644
--- a/helm/dbrepo/templates/metadata-secret.yaml
+++ b/helm/dbrepo/templates/metadata-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: metadata-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
ADMIN_EMAIL: "{{ .Values.metadataservice.admin.email }}"
ANALYSE_SERVICE_ENDPOINT: "{{ .Values.analyseservice.endpoint }}"
diff --git a/helm/dbrepo/templates/metadata-service.yaml b/helm/dbrepo/templates/metadata-service.yaml
index 80482da29272d7b2de8018c120aa41c82614a75a..592108ecacf5c83137ae429005fbf6826f114483 100644
--- a/helm/dbrepo/templates/metadata-service.yaml
+++ b/helm/dbrepo/templates/metadata-service.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Service
metadata:
name: metadata-service
- namespace: {{ $.Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
service: metadata-service
spec:
diff --git a/helm/dbrepo/templates/search-deployment.yaml b/helm/dbrepo/templates/search-deployment.yaml
index 6ba54abfcab317ab3d1a93ebf7589cdcbbcd81c4..40e3e89c1317ce177f9407311d66a4bb6b26e337 100644
--- a/helm/dbrepo/templates/search-deployment.yaml
+++ b/helm/dbrepo/templates/search-deployment.yaml
@@ -4,7 +4,7 @@ apiVersion: apps/v1
kind: Deployment
metadata:
name: search-service
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
app: search-service
service: search-service
@@ -62,15 +62,15 @@ spec:
- -ec
- "curl -sSL localhost:8080/health | grep 'UP' || exit 1"
initialDelaySeconds: 120
- periodSeconds: 30
+ periodSeconds: 10
readinessProbe:
exec:
command:
- /bin/bash
- -ec
- "curl -sSL localhost:8080/health | grep 'UP' || exit 1"
- initialDelaySeconds: 10
- periodSeconds: 30
+ initialDelaySeconds: 30
+ periodSeconds: 10
{{- if .Values.searchservice.resources }}
resources: {{- toYaml .Values.searchservice.resources | nindent 12 }}
{{- end }}
diff --git a/helm/dbrepo/templates/search-secret.yaml b/helm/dbrepo/templates/search-secret.yaml
index 251da00248f77afa295483890064ed6a3bc73211..c4293bd7fd88a00115e57c7abd5e3b89b84724b4 100644
--- a/helm/dbrepo/templates/search-secret.yaml
+++ b/helm/dbrepo/templates/search-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: search-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
ADMIN_USERNAME: "{{ .Values.identityservice.users }}"
ADMIN_PASSWORD: "{{ .Values.identityservice.userPasswords }}"
diff --git a/helm/dbrepo/templates/search-service.yaml b/helm/dbrepo/templates/search-service.yaml
index 00eb434a7c3c9c926d68d43627a1e6b1c55bf02a..e0a31e91513cdb6c396671f44c84f56199c371f7 100644
--- a/helm/dbrepo/templates/search-service.yaml
+++ b/helm/dbrepo/templates/search-service.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Service
metadata:
name: search-service
- namespace: {{ $.Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
service: search-service
spec:
diff --git a/helm/dbrepo/templates/secret.yaml b/helm/dbrepo/templates/secret.yaml
index 5761aaa774f7d7a702910dd9b7a809c7c694b171..bbd40645973c19159c2093473390f9de267735df 100644
--- a/helm/dbrepo/templates/secret.yaml
+++ b/helm/dbrepo/templates/secret.yaml
@@ -4,7 +4,7 @@ kind: Secret
type: kubernetes.io/tls
metadata:
name: ingress-cert
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
tls.crt: |
-----BEGIN CERTIFICATE-----
diff --git a/helm/dbrepo/templates/storage-job.yaml b/helm/dbrepo/templates/storage-job.yaml
index 4062aa8efeba0282954623e814bf4757e44a5f88..c5eb6605e28c08cfbb8fac906de1ca610705bf4a 100644
--- a/helm/dbrepo/templates/storage-job.yaml
+++ b/helm/dbrepo/templates/storage-job.yaml
@@ -4,7 +4,7 @@ apiVersion: batch/v1
kind: Job
metadata:
name: storage-service-create-buckets-job
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
spec:
template:
metadata:
diff --git a/helm/dbrepo/templates/storage-secret.yaml b/helm/dbrepo/templates/storage-secret.yaml
index 77bf426717fc50fe7b468196c61218388c60bf6b..3e1ed0f37df510ecbfe7b7e3a8655a0ab6ca31c3 100644
--- a/helm/dbrepo/templates/storage-secret.yaml
+++ b/helm/dbrepo/templates/storage-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: storage-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
S3_BUCKET: "{{ .Values.storageservice.s3.bucket }}"
config.json: |
diff --git a/helm/dbrepo/templates/ui-deployment.yaml b/helm/dbrepo/templates/ui-deployment.yaml
index 8c72c35f0d395230bcf3b9ace4a76a7b721bcfe7..2eed973a2aa196de26bbddc02226998706aa960c 100644
--- a/helm/dbrepo/templates/ui-deployment.yaml
+++ b/helm/dbrepo/templates/ui-deployment.yaml
@@ -4,7 +4,7 @@ apiVersion: apps/v1
kind: Deployment
metadata:
name: ui
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
app: ui
service: ui
@@ -47,13 +47,13 @@ spec:
path: /
port: 3000
initialDelaySeconds: 120
- periodSeconds: 30
+ periodSeconds: 10
readinessProbe:
httpGet:
path: /
port: 3000
initialDelaySeconds: 30
- periodSeconds: 30
+ periodSeconds: 10
{{- if .Values.ui.resources }}
resources: {{- toYaml .Values.ui.resources | nindent 12 }}
{{- end }}
diff --git a/helm/dbrepo/templates/ui-secret.yaml b/helm/dbrepo/templates/ui-secret.yaml
index af933da2e36e6af80711e46692757f4c650202f5..81fd70447a931a1cde7e8786c4d9d7f001d53e55 100644
--- a/helm/dbrepo/templates/ui-secret.yaml
+++ b/helm/dbrepo/templates/ui-secret.yaml
@@ -5,7 +5,7 @@ apiVersion: v1
kind: Secret
metadata:
name: ui-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
NUXT_PUBLIC_API_CLIENT: "{{ .Values.ui.public.api.client | default .Values.gateway }}"
NUXT_PUBLIC_API_SERVER: "{{ .Values.ui.public.api.server | default .Values.gateway }}"
diff --git a/helm/dbrepo/templates/ui-service.yaml b/helm/dbrepo/templates/ui-service.yaml
index 1abb5c65593b2550f4e739a3710bc8af3f33bbd7..1ec140db603c075948b18cf933e2f5f322ac6aae 100644
--- a/helm/dbrepo/templates/ui-service.yaml
+++ b/helm/dbrepo/templates/ui-service.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Service
metadata:
name: ui
- namespace: {{ $.Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
labels:
service: ui
spec:
diff --git a/helm/dbrepo/templates/upload-secret.yaml b/helm/dbrepo/templates/upload-secret.yaml
index 489b99743cbaaa9a816ce4d2efe7302c4b0aa5e0..c666ea2b05d0107a97f2485ebc843493de64776b 100644
--- a/helm/dbrepo/templates/upload-secret.yaml
+++ b/helm/dbrepo/templates/upload-secret.yaml
@@ -4,7 +4,7 @@ apiVersion: v1
kind: Secret
metadata:
name: upload-service-secret
- namespace: {{ .Values.namespace }}
+ namespace: {{ include "common.names.namespace" . | quote }}
stringData:
AWS_ACCESS_KEY_ID: "{{ .Values.storageservice.s3.auth.adminAccessKeyId }}"
AWS_SECRET_ACCESS_KEY: "{{ .Values.storageservice.s3.auth.adminSecretAccessKey }}"
diff --git a/helm/dbrepo/values.schema.json b/helm/dbrepo/values.schema.json
index 3e4c87a1ad78fe527c5321c03aec155f4df3c090..c988efbfbe6678651fca94cf33dc7b5fae30a3ee 100644
--- a/helm/dbrepo/values.schema.json
+++ b/helm/dbrepo/values.schema.json
@@ -396,6 +396,31 @@
"clusterDomain": {
"type": "string"
},
+ "dashboardservice": {
+ "properties": {
+ "enabled": {
+ "type": "boolean"
+ },
+ "envFromSecret": {
+ "type": "string"
+ },
+ "fullnameOverride": {
+ "type": "string"
+ },
+ "ldap": {
+ "properties": {
+ "enabled": {
+ "type": "boolean"
+ },
+ "existingSecret": {
+ "type": "string"
+ }
+ },
+ "type": "object"
+ }
+ },
+ "type": "object"
+ },
"datadb": {
"properties": {
"auth": {
@@ -1089,9 +1114,6 @@
},
"type": "object"
},
- "namespace": {
- "type": "string"
- },
"searchdb": {
"properties": {
"clusterName": {
diff --git a/helm/dbrepo/values.yaml b/helm/dbrepo/values.yaml
index ad50a24f0fea69b98addca6c5ba1535ec46a4e55..845465ac169763f9bb9edb2dd75fcf546fd304d0 100644
--- a/helm/dbrepo/values.yaml
+++ b/helm/dbrepo/values.yaml
@@ -15,8 +15,6 @@ global:
## @section Common parameters
-## @param namespace The namespace to install the chart
-namespace: dbrepo
## @param hostname The hostname.
hostname: example.com
## @param gateway The gateway endpoint.
@@ -53,7 +51,7 @@ metadatadb:
jdbcExtraArgs: ""
metrics:
## @skip metadatadb.metrics.enabled The Prometheus settings.
- enabled: false
+ enabled: true
## @skip metadatadb.initdbScriptsConfigMap The initial database scripts.
initdbScriptsConfigMap: metadata-db-setup
## @param metadatadb.extraInitDbScripts Additional init.db scripts that are executed on the first start.
@@ -100,8 +98,8 @@ authservice:
## @skip authservice.tls.usePem
usePem: true
metrics:
- ## @param authservice.metrics.enabled Enable the Prometheus metrics export sidecar container.
- enabled: false
+ ## @skip authservice.metrics.enabled
+ enabled: true
client:
## @param authservice.client.id The client id for the microservices.
id: dbrepo-client
@@ -128,9 +126,16 @@ datadb:
enabled: true
## @skip datadb.fullnameOverride
fullnameOverride: data-db
- image:
- ## @param datadb.image.debug Set the logging level to `trace`. Otherwise, set to `info`.
- debug: false
+ database:
+ image:
+ ## @param datadb.database.image.debug Set the logging level to `trace`. Otherwise, set to `info`.
+ debug: false
+ metrics:
+ ## @skip datadb.database.metrics.enabled
+ enabled: true
+ ## @skip datadb.database.secondary
+ secondary:
+ replicaCount: 2
auth:
## @param datadb.auth.rootPassword The root user password.
rootPassword: dbrepo
@@ -138,12 +143,6 @@ datadb:
replicationUser: replication
## @param datadb.auth.replicationPassword The database replication user password
replicationPassword: replication
- metrics:
- ## @skip datadb.metrics.enabled
- enabled: true
- ## @skip datadb.secondary
- secondary:
- replicaCount: 2
## @section Search Database
@@ -210,6 +209,9 @@ brokerservice:
image:
## @param brokerservice.image.debug Set the logging level to `trace`. Otherwise, set to `info`.
debug: true
+ metrics:
+ ## @skip brokerservice.metrics.enabled
+ enabled: true
## @param brokerservice.endpoint The management api endpoint for the microservices.
endpoint: http://broker-service:15672
## @param brokerservice.host The hostname for the microservices.
@@ -599,6 +601,9 @@ storageservice:
master:
## @skip storageservice.master.enabled
enabled: true
+ metrics:
+ ## @skip storageservice.master.metrics.enabled
+ enabled: true
filer:
## @param storageservice.filer.enabled Enable the storage service filer which is required for S3.
enabled: true
@@ -790,6 +795,67 @@ ui:
# mountPath: /static/logo.svg
# subPath: logo.svg
+## @section Dashboard Service
+
+dashboardservice:
+ ## @param dashboardservice.enabled Enable the Dashboard Service.
+ enabled: true
+ ## @skip dashboardservice.fullnameOverride
+ fullnameOverride: dashboard-service
+ ldap:
+ ## @skip dashboardservice.ldap.enabled
+ enabled: true
+ ## @skip dashboardservice.ldap.allowSignUp
+ allowSignUp: true
+ ## @skip dashboardservice.ldap.secretName
+ secretName: dashboard-service-secret
+ grafana:
+ ## @skip dashboardservice.grafana.extraEnvVarsSecret
+ extraEnvVarsSecret: dashboard-service-secret
+ extraConfigmaps:
+ - name: dashboard-service-config
+ mountPath: /opt/bitnami/grafana/dashboards
+ readOnly: true
+ datasources:
+ secretDefinition:
+ apiVersion: 1
+ datasources:
+ - name: "dbrepo-metric-db"
+ uid: "P18F45E9DC7E75912"
+ type: "prometheus"
+ url: "http://metric-db-server"
+ dashboardsProvider:
+ enabled: true
+
+## @section Metric Service
+
+metricdb:
+ ## @param metricdb.enabled Enable the Metric Service.
+ enabled: true
+ ## @skip metricdb.fullnameOverride
+ fullnameOverride: metric-service
+ alertmanager:
+ service:
+ ## @skip metricdb.alertmanager.service.type
+ type: ClusterIP
+ server:
+ service:
+ ## @skip metricdb.server.service.type
+ type: ClusterIP
+ persistence:
+ ## @skip metricdb.server.persistence.enabled
+ enabled: true
+ ## @skip metricdb.server.extraScrapeConfigs
+ extraScrapeConfigs:
+ - job_name: 'spring boot scrape'
+ metrics_path: '/actuator/prometheus'
+ static_configs:
+ - targets: [ 'data-service', 'metadata-service' ]
+ - job_name: 'metrics scrape'
+ metrics_path: '/metrics'
+ static_configs:
+ - targets: [ 'auth-service-metrics:8080', 'analyse-service', 'search-service', 'data-db:8080', 'data-db-metrics:9104', 'broker-service:9419', 'ui', 'metadata-db-metrics:9104', 'dashboard-service:3000', 'storage-service-master-metrics:9327', 'upload-service' ]
+
## @section Ingress
ingress:
diff --git a/install.sh b/install.sh
index aec9f270bc4b7d2311b93371973dc05aa33ba51c..a59965816bd2200960b407a53aacbd3e0b879b0d 100644
--- a/install.sh
+++ b/install.sh
@@ -3,7 +3,7 @@
# preset
VERSION="1.4.6"
MIN_CPU=8
-MIN_RAM=8
+MIN_RAM=4
MIN_MAP_COUNT=262144
SKIP_CHECKS=${SKIP_CHECKS:-0}
DOWNLOAD_ONLY=${DOWNLOAD_ONLY:-0}
@@ -58,7 +58,7 @@ fi
# environment
echo "[🚀] Gathering environment for version ${VERSION} ..."
-curl -sSL -o ./dist.tar.gz "https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/release-${VERSION}/.docker/dist.tar.gz"
+curl -sSL -o ./dist.tar.gz "https://www.ifs.tuwien.ac.at/infrastructures/dbrepo/${VERSION}/dist.tar.gz"
tar xzfv ./dist.tar.gz
if [[ $DOWNLOAD_ONLY -eq 1 ]]; then
diff --git a/lib/python/dbrepo/RestClient.py b/lib/python/dbrepo/RestClient.py
index 38f18bd84cf52545c81701ede97e2cda5ca9f230..01defc078e803e7bf7b96d11f1c05cbd58d2b125 100644
--- a/lib/python/dbrepo/RestClient.py
+++ b/lib/python/dbrepo/RestClient.py
@@ -1106,7 +1106,9 @@ class RestClient:
false_encoding: str = None, true_encoding: str = None, null_encoding: str = None,
line_encoding: str = "\n") -> None:
"""
- Import a csv dataset from a file into a table in a database with given database id and table id.
+ Import a csv dataset from a file into a table in a database with given database id and table id. ATTENTION:
+ the import is column-ordering sensitive! The csv dataset must have the same columns in the same order as the
+ target table.
:param database_id: The database id.
:param table_id: The table id.
diff --git a/lib/python/dbrepo/UploadClient.py b/lib/python/dbrepo/UploadClient.py
index 1c0b8cf88a3af9b64a47e37d510da6b0a4877d6d..b0bc90fc00aa1810d4e80873b9e8583ff1a4e5be 100644
--- a/lib/python/dbrepo/UploadClient.py
+++ b/lib/python/dbrepo/UploadClient.py
@@ -29,6 +29,7 @@ class UploadClient:
:returns: Filename on the Storage Service, if successful.
"""
+ logging.debug(f"upload file to endpoint: {self.endpoint}")
tus_client = client.TusClient(url=self.endpoint)
uploader = tus_client.uploader(file_path=file_path)
uploader.upload()
diff --git a/make/dep.mk b/make/dep.mk
deleted file mode 100644
index 25d4036cee41d8cafe49bd760a9c811a7a4ad559..0000000000000000000000000000000000000000
--- a/make/dep.mk
+++ /dev/null
@@ -1,9 +0,0 @@
-##@ Deployment
-
-.PHONY: start
-start: ## Run stable deployment.
- docker compose -f docker-compose.prod.yml up -d
-
-.PHONY: stop
-stop: ## Run stable deployment.
- docker compose -f docker-compose.prod.yml down
diff --git a/make/dev.mk b/make/dev.mk
index 2ddc6f07d083af9bae197acb2a813b04bc29c3ea..b5f7871441aba3bd20806a864d8a8c24d3fb4719 100644
--- a/make/dev.mk
+++ b/make/dev.mk
@@ -17,6 +17,11 @@ package-config: ## Package the config files
cp ./dbrepo-broker-service/enabled_plugins ./.docker/config
cp ./dbrepo-broker-service/definitions.json ./.docker/config
cp ./dbrepo-broker-service/advanced.config ./.docker/config
- cp ./dbrepo-storage-service/s3_config.json ./.docker/config
+ cp ./dbrepo-dashboard-service/grafana.ini ./.docker/config
+ cp ./dbrepo-dashboard-service/ldap.toml ./.docker/config
+ cp ./dbrepo-dashboard-service/dashboards ./.docker/config
+ cp ./dbrepo-dashboard-service/provisioning ./.docker/config
cp ./dbrepo-gateway-service/dbrepo.conf ./.docker/config
+ cp ./dbrepo-metric-db/prometheus.yml ./.docker/config
+ cp ./dbrepo-storage-service/s3_config.json ./.docker/config
cd ./.docker && tar czf ./dist.tar.gz ./docker-compose.yml ./.env ./config
diff --git a/mkdocs.yml b/mkdocs.yml
index b2314f2cf019d791d10d81e3891b6efbeb75ee50..19afed5341b4a548af2e2a01a0083e75a0e2e5b9 100644
--- a/mkdocs.yml
+++ b/mkdocs.yml
@@ -16,7 +16,7 @@ nav:
- Concepts:
- Overview: concepts/index.md
- Authentication: concepts/authentication.md
- - Databases: concepts/databases.md
+ - Database: concepts/database.md
- Messaging: concepts/messaging.md
- Monitoring: concepts/monitoring.md
- Persistent Identifier: concepts/pid.md
@@ -27,6 +27,7 @@ nav:
- Databases:
- Data Database: api/data-db.md
- Metadata Database: api/metadata-db.md
+ - Metric Database: api/metric-db.md
- SDK:
- Python Library: api/python.md
- Swagger / OpenAPI: api/open-api.md
@@ -34,6 +35,7 @@ nav:
- Analyse Service: api/analyse-service.md
- Auth Service: api/auth-service.md
- Broker Service: api/broker-service.md
+ - Dashboard Service: api/dashboard-service.md
- Data Service: api/data-service.md
- Gateway Service: api/gateway-service.md
- Identity Service: api/identity-service.md