From d1e809959ac6d96850c055088a6be4a94bc81c9c Mon Sep 17 00:00:00 2001
From: Martin Weise <martin.weise@tuwien.ac.at>
Date: Mon, 5 Feb 2024 14:49:16 +0100
Subject: [PATCH] Added citation guidance
---
.docs/papers/weise2022dbrepo.bib | 14 +++++
.docs/papers/weise2022dbrepo.rdf | 94 ++++++++++++++++++++++++++++++++
.docs/papers/weise2022dbrepo.ris | 39 +++++++++++++
.docs/papers/weise2022dbrepo.xml | 2 +
.docs/publications.md | 20 +++++--
5 files changed, 163 insertions(+), 6 deletions(-)
create mode 100644 .docs/papers/weise2022dbrepo.bib
create mode 100644 .docs/papers/weise2022dbrepo.rdf
create mode 100644 .docs/papers/weise2022dbrepo.ris
create mode 100644 .docs/papers/weise2022dbrepo.xml
diff --git a/.docs/papers/weise2022dbrepo.bib b/.docs/papers/weise2022dbrepo.bib
new file mode 100644
index 0000000000..fb028fc278
--- /dev/null
+++ b/.docs/papers/weise2022dbrepo.bib
@@ -0,0 +1,14 @@
+@article{weise2022dbrepo,
+ title = {DBRepo: a {S}emantic {D}igital {R}epository for {R}elational {D}atabases},
+ volume = {17},
+ ISSN = {1746-8256},
+ url = {https://doi.org/10.2218/ijdc.v17i1.825},
+ DOI = {10.2218/ijdc.v17i1.825},
+ number = {1},
+ journal = {International Journal of Digital Curation},
+ publisher = {Edinburgh University Library},
+ author = {Weise, Martin and Staudinger, Moritz and Michlits, Cornelia and Gergely, Eva and Stytsenko, Kirill and Ganguly, Raman and Rauber, Andreas},
+ year = {2022},
+ month = sep,
+ pages = {11}
+}
\ No newline at end of file
diff --git a/.docs/papers/weise2022dbrepo.rdf b/.docs/papers/weise2022dbrepo.rdf
new file mode 100644
index 0000000000..6e9d7ad4e3
--- /dev/null
+++ b/.docs/papers/weise2022dbrepo.rdf
@@ -0,0 +1,94 @@
+<rdf:RDF
+ xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
+ xmlns:z="http://www.zotero.org/namespaces/export#"
+ xmlns:dcterms="http://purl.org/dc/terms/"
+ xmlns:bib="http://purl.org/net/biblio#"
+ xmlns:foaf="http://xmlns.com/foaf/0.1/"
+ xmlns:link="http://purl.org/rss/1.0/modules/link/"
+ xmlns:dc="http://purl.org/dc/elements/1.1/"
+ xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/">
+ <bib:Article rdf:about="http://ijdc.net/article/view/825">
+ <z:itemType>journalArticle</z:itemType>
+ <dcterms:isPartOf rdf:resource="urn:issn:1746-8256"/>
+ <bib:authors>
+ <rdf:Seq>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Weise</foaf:surname>
+ <foaf:givenName>Martin</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Staudinger</foaf:surname>
+ <foaf:givenName>Moritz</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Michlits</foaf:surname>
+ <foaf:givenName>Cornelia</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Gergely</foaf:surname>
+ <foaf:givenName>Eva</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Stytsenko</foaf:surname>
+ <foaf:givenName>Kirill</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Ganguly</foaf:surname>
+ <foaf:givenName>Raman</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ <rdf:li>
+ <foaf:Person>
+ <foaf:surname>Rauber</foaf:surname>
+ <foaf:givenName>Andreas</foaf:givenName>
+ </foaf:Person>
+ </rdf:li>
+ </rdf:Seq>
+ </bib:authors>
+ <link:link rdf:resource="#item_2"/>
+ <dc:title>DBRepo: a Semantic Digital Repository for Relational Databases</dc:title>
+ <dcterms:abstract>Data curation is a complex, multi-faceted task. While dedicated data stewards are starting to take care of these activities in close collaboration with researchers for many types of (usually file-based) data in many institutions, this is rarely yet the case for data held in relational databases. Beyond large-scale infrastructures hosting e.g. climate or genome data, researchers usually have to create, build and maintain their database, care about security patches, and feed data into it in order to use it in their research. Data curation, if at all, usually happens after a project is finished, when data may be exported for digital preservation into file repository systems.
+We present DBRepo, a semantic digital repository for relational databases in a private cloud setting designed to (1) host research data stored in relational databases right from the beginning of a research project, (2) provide separation of concerns, allowing the researchers to focus on the domain aspects of the data and their work while bringing in experts to handle classic data management tasks, (3) improve findability, accessibility and reusability by offering semantic mapping of metadata attributes, and (4) focus on reproducibility in dynamically evolving data by supporting versioning and precise identification/cite-ability for arbitrary subsets of data.</dcterms:abstract>
+ <dc:date>2022-09-07</dc:date>
+ <z:shortTitle>DBRepo</z:shortTitle>
+ <z:libraryCatalog>DOI.org (Crossref)</z:libraryCatalog>
+ <dc:identifier>
+ <dcterms:URI>
+ <rdf:value>http://ijdc.net/article/view/825</rdf:value>
+ </dcterms:URI>
+ </dc:identifier>
+ <dcterms:dateSubmitted>2024-02-05 13:45:47</dcterms:dateSubmitted>
+ <bib:pages>11</bib:pages>
+ </bib:Article>
+ <bib:Journal rdf:about="urn:issn:1746-8256">
+ <prism:volume>17</prism:volume>
+ <dc:title>International Journal of Digital Curation</dc:title>
+ <dc:identifier>DOI 10.2218/ijdc.v17i1.825</dc:identifier>
+ <prism:number>1</prism:number>
+ <dcterms:alternative>IJDC</dcterms:alternative>
+ <dc:identifier>ISSN 1746-8256</dc:identifier>
+ </bib:Journal>
+ <z:Attachment rdf:about="#item_2">
+ <z:itemType>attachment</z:itemType>
+ <dc:title>Submitted Version</dc:title>
+ <dc:identifier>
+ <dcterms:URI>
+ <rdf:value>https://zenodo.org/record/6637333/files/IDCC22_DBREPO_PREPRINT.pdf</rdf:value>
+ </dcterms:URI>
+ </dc:identifier>
+ <dcterms:dateSubmitted>2024-02-05 13:45:49</dcterms:dateSubmitted>
+ <z:linkMode>1</z:linkMode>
+ <link:type>application/pdf</link:type>
+ </z:Attachment>
+</rdf:RDF>
diff --git a/.docs/papers/weise2022dbrepo.ris b/.docs/papers/weise2022dbrepo.ris
new file mode 100644
index 0000000000..ed322ffa03
--- /dev/null
+++ b/.docs/papers/weise2022dbrepo.ris
@@ -0,0 +1,39 @@
+TY - JOUR
+AU - Weise, Martin
+AU - Staudinger, Moritz
+AU - Michlits, Cornelia
+AU - Gergely, Eva
+AU - Stytsenko, Kirill
+AU - Ganguly, Raman
+AU - Rauber, Andreas
+TI - DBRepo: A Semantic Digital Repository for Relational Databases
+T2 - International Journal of Digital Curation
+VL - 17
+IS - 1
+SP - 11
+PY - 2022
+DA - 2022/9/7
+PB - Edinburgh University Library
+AB - Data curation is a complex, multi-faceted task. While dedicated data
+ stewards are starting to take care of these activities in close
+ collaboration with researchers for many types of (usually file-based) data
+ in many institutions, this is rarely yet the case for data held in
+ relational databases. Beyond large-scale infrastructures hosting e.g.
+ climate or genome data, researchers usually have to create, build and
+ maintain their database, care about security patches, and feed data into
+ it in order to use it in their research. Data curation, if at all, usually
+ happens after a project is finished, when data may be exported for digital
+ preservation into file repository systems. We present DBRepo, a semantic
+ digital repository for relational databases in a private cloud setting
+ designed to (1) host research data stored in relational databases right
+ from the beginning of a research project, (2) provide separation of
+ concerns, allowing the researchers to focus on the domain aspects of the
+ data and their work while bringing in experts to handle classic data
+ management tasks, (3) improve findability, accessibility and reusability
+ by offering semantic mapping of metadata attributes, and (4) focus on
+ reproducibility in dynamically evolving data by supporting versioning and
+ precise identification/cite-ability for arbitrary subsets of data.
+SN - 1746-8256
+DO - 10.2218/ijdc.v17i1.825
+UR - https://doi.org/10.2218/ijdc.v17i1.825
+ER -
diff --git a/.docs/papers/weise2022dbrepo.xml b/.docs/papers/weise2022dbrepo.xml
new file mode 100644
index 0000000000..8684aeb630
--- /dev/null
+++ b/.docs/papers/weise2022dbrepo.xml
@@ -0,0 +1,2 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<xml><records><record><database name="MyLibrary">MyLibrary</database><source-app name="Zotero">Zotero</source-app><ref-type name="Journal Article">17</ref-type><contributors><authors><author>Weise, Martin</author><author>Staudinger, Moritz</author><author>Michlits, Cornelia</author><author>Gergely, Eva</author><author>Stytsenko, Kirill</author><author>Ganguly, Raman</author><author>Rauber, Andreas</author></authors></contributors><titles><title>DBRepo: a Semantic Digital Repository for Relational Databases</title><secondary-title>International Journal of Digital Curation</secondary-title><short-title>DBRepo</short-title></titles><periodical><full-title>International Journal of Digital Curation</full-title><abbr-1>IJDC</abbr-1></periodical><pages>11</pages><volume>17</volume><number>1</number><issue>1</issue><dates><year>2022</year><pub-dates><date>2022-09-07</date></pub-dates></dates><isbn>1746-8256</isbn><electronic-resource-num>10.2218/ijdc.v17i1.825</electronic-resource-num><abstract>Data curation is a complex, multi-faceted task. While dedicated data stewards are starting to take care of these activities in close collaboration with researchers for many types of (usually file-based) data in many institutions, this is rarely yet the case for data held in relational databases. Beyond large-scale infrastructures hosting e.g. climate or genome data, researchers usually have to create, build and maintain their database, care about security patches, and feed data into it in order to use it in their research. Data curation, if at all, usually happens after a project is finished, when data may be exported for digital preservation into file repository systems.
We present DBRepo, a semantic digital repository for relational databases in a private cloud setting designed to (1) host research data stored in relational databases right from the beginning of a research project, (2) provide separation of concerns, allowing the researchers to focus on the domain aspects of the data and their work while bringing in experts to handle classic data management tasks, (3) improve findability, accessibility and reusability by offering semantic mapping of metadata attributes, and (4) focus on reproducibility in dynamically evolving data by supporting versioning and precise identification/cite-ability for arbitrary subsets of data.</abstract><remote-database-name>DOI.org (Crossref)</remote-database-name><urls><web-urls><url>http://ijdc.net/article/view/825</url></web-urls><pdf-urls><url>/home/mweise/Zotero/storage/DEL3SNPP/Weise et al. - 2022 - DBRepo a Semantic Digital Repository for Relation.pdf</url></pdf-urls></urls><access-date>2024-02-05 13:45:47</access-date></record></records></xml>
\ No newline at end of file
diff --git a/.docs/publications.md b/.docs/publications.md
index 8da7c4f985..6fe9593cc7 100644
--- a/.docs/publications.md
+++ b/.docs/publications.md
@@ -6,17 +6,25 @@ hide:
# Publications
+!!! abstract "How to Cite DBRepo"
+
+ Please cite the following paper:
+
+ Weise, M., Staudinger, M., Michlits, C., Gergely, E., Stytsenko, K., Ganguly, R., & Rauber, A. (2022). DBRepo: a
+ Semantic Digital Repository for Relational Databases. *International Journal of Digital Curation*, 17(1), 11.
+ DOI: [10.2218/ijdc.v17i1.825](https://doi.org/10.2218/ijdc.v17i1.825)<br />
+
+ [[BibTeX](../papers/weise2022dbrepo.bib)] [[RIS](../papers/weise2022dbrepo.ris)] [[RDF](../papers/weise2022dbrepo.rdf)] [[EndNote](../papers/weise2022dbrepo.xml)]
+
## Logos
DBRepo logo in various formats:
-* [logo.png](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/logo.png)
-* [logo.svg](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/logo.svg)
-
-DBRepo logo (short) in various formats:
+* PNG: [bigger](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/logo.png)
+ ([smaller](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/favicon.png))
+* SVG: [bigger](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/logo.svg)
+ ([smaller](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/favicon.svg))
-* [favicon.svg](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/favicon.svg)
-* [favicon.png](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-ui/static/favicon.png)
## Refereed
--
GitLab