diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/Container.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/Container.java
index 168c0cc752079d259ac21b5da411d795cbd1cf46..f656ba84bb8eb52d46301ba40fabeb68c060db44 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/Container.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/Container.java
@@ -5,7 +5,6 @@ import at.tuwien.entities.database.Database;
import com.fasterxml.jackson.annotation.JsonFormat;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -13,6 +12,8 @@ import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.time.Instant;
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -26,8 +27,7 @@ public class Container {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "containers-sequence")
- @GenericGenerator(name = "containers-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/ContainerImage.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/ContainerImage.java
index 4a9e9a4b9f6a6552c1b4f8342da3248006e7ad34..fbd4e44e8e5d3e9639cacb99acb5d55f5b045f61 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/ContainerImage.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/ContainerImage.java
@@ -4,7 +4,6 @@ import at.tuwien.entities.container.Container;
import com.fasterxml.jackson.annotation.JsonFormat;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -12,6 +11,8 @@ import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.time.Instant;
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -28,8 +29,7 @@ public class ContainerImage {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "images-sequence")
- @GenericGenerator(name = "images-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
public Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/DataType.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/DataType.java
index 47872da89036300ed6ec9970821a77580322b630..93759ed5cbfb6a1de6789de943036b457f7e63f7 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/DataType.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/DataType.java
@@ -2,9 +2,10 @@ package at.tuwien.entities.container.image;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -18,8 +19,7 @@ public class DataType {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "image-type-sequence")
- @GenericGenerator(name = "image-type-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
public Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/Operator.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/Operator.java
index 418d54cb6446670123aa2b2acd4ed6e7b01e3ccc..ae01dbee2f2a22dc40712b0fff2f8ac7e16adbc6 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/Operator.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/container/image/Operator.java
@@ -2,9 +2,10 @@ package at.tuwien.entities.container.image;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -18,8 +19,7 @@ public class Operator {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "image-type-sequence")
- @GenericGenerator(name = "image-type-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
public Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/Database.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/Database.java
index 41808a14535ff310233cc77627376cc6684365bc..e54b097bd045ae550a594e3b0585fa2fec110c96 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/Database.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/Database.java
@@ -5,13 +5,10 @@ import at.tuwien.entities.database.table.Table;
import at.tuwien.entities.identifier.Identifier;
import at.tuwien.entities.user.User;
import com.fasterxml.jackson.annotation.JsonFormat;
-import jakarta.persistence.CascadeType;
import jakarta.persistence.*;
-import jakarta.persistence.NamedQueries;
-import jakarta.persistence.NamedQuery;
-import jakarta.persistence.OrderBy;
import lombok.*;
-import org.hibernate.annotations.*;
+import org.hibernate.annotations.JdbcTypeCode;
+import org.hibernate.annotations.Where;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -21,6 +18,8 @@ import java.time.Instant;
import java.util.List;
import java.util.UUID;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder(toBuilder = true)
@@ -45,8 +44,7 @@ public class Database implements Serializable {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "databases-sequence")
- @GenericGenerator(name = "databases-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/View.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/View.java
index 2421612358cf37f8ce600c494dc3eca30afe0762..ae12208ad8e7f66e00a7c73ce59ae1cd18ef343f 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/View.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/View.java
@@ -4,13 +4,11 @@ import at.tuwien.entities.identifier.Identifier;
import at.tuwien.entities.user.User;
import com.fasterxml.jackson.annotation.JsonFormat;
import jakarta.persistence.*;
-import jakarta.persistence.CascadeType;
-import jakarta.persistence.NamedQueries;
-import jakarta.persistence.NamedQuery;
-import jakarta.persistence.OrderBy;
-import jakarta.persistence.Table;
import lombok.*;
-import org.hibernate.annotations.*;
+import org.hibernate.annotations.JdbcTypeCode;
+import org.hibernate.annotations.OnDelete;
+import org.hibernate.annotations.OnDeleteAction;
+import org.hibernate.annotations.Where;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -19,6 +17,8 @@ import java.time.Instant;
import java.util.List;
import java.util.UUID;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -38,8 +38,7 @@ public class View {
@Id
@org.springframework.data.annotation.Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "views-sequence")
- @GenericGenerator(name = "views-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/ViewColumn.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/ViewColumn.java
index 201d7075e5f1df0b90c4c885ed76c2573e19d870..ef1372f3bc7339c694c42c4b3aed0d7010c9193f 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/ViewColumn.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/ViewColumn.java
@@ -3,9 +3,10 @@ package at.tuwien.entities.database;
import at.tuwien.entities.database.table.columns.TableColumnType;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder(toBuilder = true)
@@ -21,8 +22,7 @@ public class ViewColumn implements Comparable<ViewColumn> {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "view-columns-sequence")
- @GenericGenerator(name = "view-columns-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/Table.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/Table.java
index 2fe81e2e37df1e23822ae8a4216a332411d221fe..921a873c44e935a3b89459c8d9bb20c44df4dc84 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/Table.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/Table.java
@@ -6,12 +6,13 @@ import at.tuwien.entities.database.table.constraints.Constraints;
import at.tuwien.entities.identifier.Identifier;
import at.tuwien.entities.user.User;
import com.fasterxml.jackson.annotation.JsonFormat;
-import jakarta.persistence.CascadeType;
-import jakarta.persistence.OrderBy;
import jakarta.persistence.*;
import lombok.*;
import lombok.extern.log4j.Log4j2;
-import org.hibernate.annotations.*;
+import org.hibernate.annotations.JdbcTypeCode;
+import org.hibernate.annotations.OnDelete;
+import org.hibernate.annotations.OnDeleteAction;
+import org.hibernate.annotations.Where;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -20,6 +21,8 @@ import java.time.Instant;
import java.util.List;
import java.util.UUID;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -36,8 +39,7 @@ public class Table {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "tables-sequence")
- @GenericGenerator(name = "tables-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(name = "ID", updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumn.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumn.java
index 841dbde754a09a5fdd51cec7872ae4c8a4e5e946..32e3b46c5dedd265ffcf363480dc3baa20005692 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumn.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumn.java
@@ -4,7 +4,6 @@ import at.tuwien.entities.database.table.Table;
import com.fasterxml.jackson.annotation.JsonFormat;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -13,6 +12,8 @@ import java.math.BigDecimal;
import java.time.Instant;
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder(toBuilder = true)
@@ -31,8 +32,7 @@ public class TableColumn implements Comparable<TableColumn> {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "columns-sequence")
- @GenericGenerator(name = "columns-sequence", strategy = "increment")
+ @GeneratedValue(strategy=IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnConcept.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnConcept.java
index e53e69f49808946cff5907f8057bde8923afd9b7..0283b10cd0a0066d7573e3e4d0a579cffad3e1b9 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnConcept.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnConcept.java
@@ -1,16 +1,16 @@
package at.tuwien.entities.database.table.columns;
import com.fasterxml.jackson.annotation.JsonFormat;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
-
import java.time.Instant;
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -30,8 +30,7 @@ public class TableColumnConcept {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "concepts-sequence")
- @GenericGenerator(name = "concepts-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnUnit.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnUnit.java
index df3950785e4d8a35ef4f8021bfe3a4c34540fbb2..def2a78e0814d21a768b3e62a62f3576f4adb5c4 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnUnit.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/columns/TableColumnUnit.java
@@ -1,15 +1,16 @@
package at.tuwien.entities.database.table.columns;
import com.fasterxml.jackson.annotation.JsonFormat;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
import java.time.Instant;
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -29,8 +30,7 @@ public class TableColumnUnit {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "units-sequence")
- @GenericGenerator(name = "units-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKey.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKey.java
index e5a58f5d0d37f14ba812f030b70a81a213e8219f..69dad3d01ce6eb557588c5d7f9472828ff65c712 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKey.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKey.java
@@ -1,14 +1,14 @@
package at.tuwien.entities.database.table.constraints.foreignKey;
import at.tuwien.entities.database.table.Table;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
-
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -22,8 +22,7 @@ public class ForeignKey {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "foreign-key-sequence")
- @GenericGenerator(name = "foreign-key-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(name = "fkid", updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKeyReference.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKeyReference.java
index c5f3570099dd5bd12ec641f07e6d2a9f8963b1ce..0ec2a3393d2fdb539b8207d9fe94fc3f8002b93c 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKeyReference.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/foreignKey/ForeignKeyReference.java
@@ -1,11 +1,11 @@
package at.tuwien.entities.database.table.constraints.foreignKey;
import at.tuwien.entities.database.table.columns.TableColumn;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
+import static jakarta.persistence.GenerationType.IDENTITY;
@Data
@Entity
@@ -22,8 +22,7 @@ public class ForeignKeyReference {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "foreign-key-reference-sequence")
- @GenericGenerator(name = "foreign-key-reference-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/primaryKey/PrimaryKey.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/primaryKey/PrimaryKey.java
index aaa1e5fc8f9102c97294d1f9e53624c5fa3b8e45..84d8cb75d7f68a0ea5f9e5336e477e19b00fd076 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/primaryKey/PrimaryKey.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/primaryKey/PrimaryKey.java
@@ -4,9 +4,10 @@ import at.tuwien.entities.database.table.Table;
import at.tuwien.entities.database.table.columns.TableColumn;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -20,8 +21,7 @@ public class PrimaryKey {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "foreign-key-sequence")
- @GenericGenerator(name = "foreign-key-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(name = "pkid", updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/unique/Unique.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/unique/Unique.java
index c49fc48eb67b6d5ed3689086a1fba4c75e7a1b6c..f8517dda17367172072392ba65db1a5e0f08b8c0 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/unique/Unique.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/database/table/constraints/unique/Unique.java
@@ -2,14 +2,14 @@ package at.tuwien.entities.database.table.constraints.unique;
import at.tuwien.entities.database.table.Table;
import at.tuwien.entities.database.table.columns.TableColumn;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
-
import java.util.List;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -23,8 +23,7 @@ public class Unique {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "constraints-unique-sequence")
- @GenericGenerator(name = "constraints-unique-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(name = "uid", updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Creator.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Creator.java
index f69f3c6d7177bd1f71cdaff66355971f9e2e1f8c..9ec7dca46891e7ae7d99134977d44b67a23a5679 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Creator.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Creator.java
@@ -1,10 +1,10 @@
package at.tuwien.entities.identifier;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
+import static jakarta.persistence.GenerationType.IDENTITY;
@Data
@Entity
@@ -19,8 +19,7 @@ public class Creator {
@Id
@org.springframework.data.annotation.Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "creators-sequence")
- @GenericGenerator(name = "creators-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Identifier.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Identifier.java
index 311362a82073c1d8c936abd6500426d695a74acf..db34a5aca526b0ca009946f677811e9d175bd6ec 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Identifier.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/Identifier.java
@@ -6,13 +6,8 @@ import at.tuwien.entities.database.License;
import at.tuwien.entities.user.User;
import com.fasterxml.jackson.annotation.JsonFormat;
import jakarta.persistence.*;
-import jakarta.persistence.CascadeType;
-import jakarta.persistence.NamedQueries;
-import jakarta.persistence.NamedQuery;
-import jakarta.persistence.OrderBy;
-import jakarta.persistence.Table;
import lombok.*;
-import org.hibernate.annotations.*;
+import org.hibernate.annotations.JdbcTypeCode;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
@@ -22,6 +17,8 @@ import java.time.Instant;
import java.util.List;
import java.util.UUID;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder(toBuilder = true)
@@ -43,8 +40,7 @@ public class Identifier implements Serializable {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "identifiers-sequence")
- @GenericGenerator(name = "identifiers-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierDescription.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierDescription.java
index 8544650a6c1b30ae06f3502fe91b33ce75783485..83e123e90dc83d28dff6d471f99a624b4a278479 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierDescription.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierDescription.java
@@ -3,11 +3,12 @@ package at.tuwien.entities.identifier;
import at.tuwien.entities.database.LanguageType;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.io.Serializable;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -21,8 +22,7 @@ public class IdentifierDescription implements Serializable {
@Id
@org.springframework.data.annotation.Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "identifier-descriptions-sequence")
- @GenericGenerator(name = "identifier-descriptions-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierFunder.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierFunder.java
index cd08b9ccbe56045d18b477d17e34427163bae689..56372bdb6382562f45154ba430bfe593e19d3ee6 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierFunder.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierFunder.java
@@ -2,11 +2,12 @@ package at.tuwien.entities.identifier;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.io.Serializable;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -19,8 +20,7 @@ public class IdentifierFunder implements Serializable {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "identifier-titles-sequence")
- @GenericGenerator(name = "identifier-titles-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
@@ -30,7 +30,7 @@ public class IdentifierFunder implements Serializable {
@Column(columnDefinition = "TEXT")
private String funderIdentifier;
- @Column(name="funder_identifier_type", columnDefinition = "ENUM('CROSSREF_FUNDER_ID', 'ROR', 'GND', 'ISNI', 'OTHER')")
+ @Column(name = "funder_identifier_type", columnDefinition = "ENUM('CROSSREF_FUNDER_ID', 'ROR', 'GND', 'ISNI', 'OTHER')")
@Enumerated(EnumType.STRING)
private IdentifierFunderType funderIdentifierType;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierTitle.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierTitle.java
index 72cc7c95ca87bdea83540c64d1ed32aee084bf88..ea1c17bc92765ad0659eafd5aebe5a10108778fd 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierTitle.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/IdentifierTitle.java
@@ -3,11 +3,12 @@ package at.tuwien.entities.identifier;
import at.tuwien.entities.database.LanguageType;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.io.Serializable;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -20,8 +21,7 @@ public class IdentifierTitle implements Serializable {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "identifier-titles-sequence")
- @GenericGenerator(name = "identifier-titles-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/RelatedIdentifier.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/RelatedIdentifier.java
index 1bc3d269fa183f673b9f3c6912b290d36aebcc1c..b09c7afc36e7466734f6c1fd923a46081d9d4b13 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/RelatedIdentifier.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/identifier/RelatedIdentifier.java
@@ -1,10 +1,10 @@
package at.tuwien.entities.identifier;
+import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
-import jakarta.persistence.*;
+import static jakarta.persistence.GenerationType.IDENTITY;
@Data
@Entity
@@ -21,8 +21,7 @@ public class RelatedIdentifier {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "related-identifiers-sequence")
- @GenericGenerator(name = "related-identifiers-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/maintenance/BannerMessage.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/maintenance/BannerMessage.java
index de0d917b43c9a4b0b8aeba9ca71d329f7a0bf7a8..94cb08490ab47930894d79431501cee1f3a0324f 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/maintenance/BannerMessage.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/maintenance/BannerMessage.java
@@ -2,11 +2,12 @@ package at.tuwien.entities.maintenance;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.time.Instant;
+import static jakarta.persistence.GenerationType.IDENTITY;
+
@Data
@Entity
@Builder
@@ -22,8 +23,7 @@ public class BannerMessage {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "messages-sequence")
- @GenericGenerator(name = "messages-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/semantics/Ontology.java b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/semantics/Ontology.java
index c5043c361791b3ca2fc8915c1a573dd8174de6d3..28451838c654fc0009e7d99b5f1266da051feea5 100644
--- a/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/semantics/Ontology.java
+++ b/dbrepo-metadata-service/entities/src/main/java/at/tuwien/entities/semantics/Ontology.java
@@ -2,14 +2,13 @@ package at.tuwien.entities.semantics;
import jakarta.persistence.*;
import lombok.*;
-import org.hibernate.annotations.GenericGenerator;
-import org.hibernate.annotations.JdbcTypeCode;
import org.springframework.data.annotation.CreatedDate;
import org.springframework.data.annotation.LastModifiedDate;
import org.springframework.data.jpa.domain.support.AuditingEntityListener;
import java.time.Instant;
-import java.util.UUID;
+
+import static jakarta.persistence.GenerationType.IDENTITY;
@Data
@Entity
@@ -28,8 +27,7 @@ public class Ontology {
@Id
@EqualsAndHashCode.Include
- @GeneratedValue(generator = "ontologies-sequence")
- @GenericGenerator(name = "ontologies-sequence", strategy = "increment")
+ @GeneratedValue(strategy = IDENTITY)
@Column(updatable = false, nullable = false)
private Long id;
diff --git a/dbrepo-metadata-service/rest-service/src/test/java/at/tuwien/endpoints/DatabaseEndpointUnitTest.java b/dbrepo-metadata-service/rest-service/src/test/java/at/tuwien/endpoints/DatabaseEndpointUnitTest.java
index 9852cde936981ed222260675c248345745314317..710a64c3ab2d0bf694c87c6626e461eb3fb38f28 100644
--- a/dbrepo-metadata-service/rest-service/src/test/java/at/tuwien/endpoints/DatabaseEndpointUnitTest.java
+++ b/dbrepo-metadata-service/rest-service/src/test/java/at/tuwien/endpoints/DatabaseEndpointUnitTest.java
@@ -489,6 +489,8 @@ public class DatabaseEndpointUnitTest extends AbstractUnitTest {
doNothing()
.when(messageQueueService)
.setVirtualHostPermissions(user);
+ when(databaseService.findById(anyLong()))
+ .thenReturn(DATABASE_1);
/* test */
final ResponseEntity<DatabaseDto> response = databaseEndpoint.create(data, principal);
diff --git a/dbrepo-metadata-service/services/src/main/java/at/tuwien/service/impl/DatabaseServiceImpl.java b/dbrepo-metadata-service/services/src/main/java/at/tuwien/service/impl/DatabaseServiceImpl.java
index 9ffa720d4d94acc38ebe1652624aa8956f80ae83..f3f4cccc5d5d8742d4c35d12b982001e0cfbb431 100644
--- a/dbrepo-metadata-service/services/src/main/java/at/tuwien/service/impl/DatabaseServiceImpl.java
+++ b/dbrepo-metadata-service/services/src/main/java/at/tuwien/service/impl/DatabaseServiceImpl.java
@@ -88,7 +88,7 @@ public class DatabaseServiceImpl implements DatabaseService {
public Database create(Container container, DatabaseCreateDto data, User user) throws UserNotFoundException,
ContainerNotFoundException, DataServiceException, DataServiceConnectionException, DatabaseNotFoundException,
SearchServiceException, SearchServiceConnectionException {
- Database database = Database.builder()
+ final Database entity = Database.builder()
.isPublic(data.getIsPublic())
.isSchemaPublic(data.getIsSchemaPublic())
.name(data.getName())
@@ -112,21 +112,21 @@ public class DatabaseServiceImpl implements DatabaseService {
.password(user.getMariadbPassword())
.privilegedUsername(container.getPrivilegedUsername())
.privilegedPassword(container.getPrivilegedPassword())
- .internalName(database.getInternalName())
+ .internalName(entity.getInternalName())
.build();
final DatabaseDto dto = dataServiceGateway.createDatabase(payload);
- database.setExchangeName(dto.getExchangeName());
+ entity.setExchangeName(dto.getExchangeName());
/* create in metadata database */
- database = databaseRepository.save(database);
- database.getAccesses()
+ final Database entity1 = databaseRepository.save(entity);
+ entity1.getAccesses()
.add(DatabaseAccess.builder()
.type(AccessType.WRITE_ALL)
- .hdbid(database.getId())
- .database(database)
+ .hdbid(entity1.getId())
+ .database(entity1)
.huserid(user.getId())
.user(user)
.build());
- database = databaseRepository.save(database);
+ final Database database = databaseRepository.save(entity1);
/* create in search service */
searchServiceGateway.update(database);
log.info("Created database with id {}", database.getId());
diff --git a/docker-compose.yml b/docker-compose.yml
index ca7c642c4dc6fa710000921ff0d5260bcd34f5ac..7159ff58cbb59eec4d114603c71c5ea4c52d51b1 100644
--- a/docker-compose.yml
+++ b/docker-compose.yml
@@ -112,6 +112,7 @@ services:
init: true
restart: "no"
image: dbrepo-auth-service-init:latest
+ container_name: dbrepo-auth-service-init
build:
context: ./dbrepo-auth-service/init
network: host
diff --git a/helm/dbrepo/charts/seaweedfs-4.2.1.tgz b/helm/dbrepo/charts/seaweedfs-4.2.1.tgz
index 0d1b6f6c9f8a873ed68e3429e864c1c53bc0bdb5..480c5468d22ef48a84068eb63029f0b45a4d8873 100644
Binary files a/helm/dbrepo/charts/seaweedfs-4.2.1.tgz and b/helm/dbrepo/charts/seaweedfs-4.2.1.tgz differ
diff --git a/helm/dbrepo/values.yaml b/helm/dbrepo/values.yaml
index cd52f413e1421b77e56a4004352760058bf1e4d6..edded77832dbfa31625ce0a9a91cbd821fb45afa 100644
--- a/helm/dbrepo/values.yaml
+++ b/helm/dbrepo/values.yaml
@@ -444,7 +444,7 @@ metadataservice:
enabled: true
image:
## @skip metadataservice.image.name
- name: registry.datalab.tuwien.ac.at/dbrepo/metadata-service:1.6.0
+ name: registry.datalab.tuwien.ac.at/dbrepo/metadata-service:1.6.0rc6
## ref: https://kubernetes.io/docs/tasks/configure-pod-container/security-context/#set-the-security-context-for-a-pod
podSecurityContext:
## @param metadataservice.podSecurityContext.enabled Enable pods' Security Context
@@ -479,7 +479,7 @@ metadataservice:
## @param metadataservice.containerSecurityContext.seccompProfile.type Set container's Security Context seccomp profile
type: "RuntimeDefault"
## @param metadataservice.resourcesPreset The container resource preset
- resourcesPreset: "micro"
+ resourcesPreset: "small"
## @param metadataservice.resources Set container requests and limits for different resources like CPU or memory (essential for production workloads)
resources: { }
## requests:
@@ -541,7 +541,7 @@ dataservice:
endpoint: http://data-service
image:
## @skip dataservice.image.name
- name: registry.datalab.tuwien.ac.at/dbrepo/data-service:1.6.0
+ name: registry.datalab.tuwien.ac.at/dbrepo/data-service:1.6.0rc3
## ref: https://kubernetes.io/docs/tasks/configure-pod-container/security-context/#set-the-security-context-for-a-pod
podSecurityContext:
## @param dataservice.podSecurityContext.enabled Enable pods' Security Context
diff --git a/lib/python/Pipfile b/lib/python/Pipfile
index 9a500073bf20f6de26d5107639596f75aa5a5cb2..b54561e5f8ff11eb4706050946f23f4a4004fdb5 100644
--- a/lib/python/Pipfile
+++ b/lib/python/Pipfile
@@ -19,6 +19,7 @@ coverage = "*"
pytest = "*"
requests-mock = "*"
furo = "*"
+pytest-ordering = "*"
[requires]
python_version = "3.11"
diff --git a/lib/python/Pipfile.lock b/lib/python/Pipfile.lock
index 9e3fffe667c09d15c41fb0f67f93430642958bf4..836140fd7bff162440f0e8fdd3ab3ef5d2c4a316 100644
--- a/lib/python/Pipfile.lock
+++ b/lib/python/Pipfile.lock
@@ -1,7 +1,7 @@
{
"_meta": {
"hash": {
- "sha256": "0d68aff443d441814f16f7d184c560ebfa95c4ca18ecc6fcb52856078ce9bf9c"
+ "sha256": "4fc272b993d5091dc8d60aee49575f17cd1de3145d916dc6aa82c09f7cefe4ee"
},
"pipfile-spec": 6,
"requires": {
@@ -26,93 +26,93 @@
},
"aiohttp": {
"hashes": [
- "sha256:0411777249f25d11bd2964a230b3ffafcbed6cd65d0f2b132bc2b8f5b8c347c7",
- "sha256:0a97d657f6cf8782a830bb476c13f7d777cfcab8428ac49dde15c22babceb361",
- "sha256:0b5a5009b0159a8f707879dc102b139466d8ec6db05103ec1520394fdd8ea02c",
- "sha256:0bcb7f6976dc0b6b56efde13294862adf68dd48854111b422a336fa729a82ea6",
- "sha256:14624d96f0d69cf451deed3173079a68c322279be6030208b045ab77e1e8d550",
- "sha256:15c4e489942d987d5dac0ba39e5772dcbed4cc9ae3710d1025d5ba95e4a5349c",
- "sha256:176f8bb8931da0613bb0ed16326d01330066bb1e172dd97e1e02b1c27383277b",
- "sha256:17af09d963fa1acd7e4c280e9354aeafd9e3d47eaa4a6bfbd2171ad7da49f0c5",
- "sha256:1a8b13b9950d8b2f8f58b6e5842c4b842b5887e2c32e3f4644d6642f1659a530",
- "sha256:202f40fb686e5f93908eee0c75d1e6fbe50a43e9bd4909bf3bf4a56b560ca180",
- "sha256:21cbe97839b009826a61b143d3ca4964c8590d7aed33d6118125e5b71691ca46",
- "sha256:27935716f8d62c1c73010428db310fd10136002cfc6d52b0ba7bdfa752d26066",
- "sha256:282e0a7ddd36ebc411f156aeaa0491e8fe7f030e2a95da532cf0c84b0b70bc66",
- "sha256:28f29bce89c3b401a53d6fd4bee401ee943083bf2bdc12ef297c1d63155070b0",
- "sha256:2ac9fd83096df36728da8e2f4488ac3b5602238f602706606f3702f07a13a409",
- "sha256:30f9f89ae625d412043f12ca3771b2ccec227cc93b93bb1f994db6e1af40a7d3",
- "sha256:317251b9c9a2f1a9ff9cd093775b34c6861d1d7df9439ce3d32a88c275c995cd",
- "sha256:31de2f10f63f96cc19e04bd2df9549559beadd0b2ee2da24a17e7ed877ca8c60",
- "sha256:36df00e0541f264ce42d62280281541a47474dfda500bc5b7f24f70a7f87be7a",
- "sha256:39625703540feb50b6b7f938b3856d1f4886d2e585d88274e62b1bd273fae09b",
- "sha256:3f5461c77649358610fb9694e790956b4238ac5d9e697a17f63619c096469afe",
- "sha256:4313f3bc901255b22f01663eeeae167468264fdae0d32c25fc631d5d6e15b502",
- "sha256:442356e8924fe1a121f8c87866b0ecdc785757fd28924b17c20493961b3d6697",
- "sha256:44cb1a1326a0264480a789e6100dc3e07122eb8cd1ad6b784a3d47d13ed1d89c",
- "sha256:44d323aa80a867cb6db6bebb4bbec677c6478e38128847f2c6b0f70eae984d72",
- "sha256:499368eb904566fbdf1a3836a1532000ef1308f34a1bcbf36e6351904cced771",
- "sha256:4b01d9cfcb616eeb6d40f02e66bebfe7b06d9f2ef81641fdd50b8dd981166e0b",
- "sha256:5720ebbc7a1b46c33a42d489d25d36c64c419f52159485e55589fbec648ea49a",
- "sha256:5cc5e0d069c56645446c45a4b5010d4b33ac6c5ebfd369a791b5f097e46a3c08",
- "sha256:618b18c3a2360ac940a5503da14fa4f880c5b9bc315ec20a830357bcc62e6bae",
- "sha256:6435a66957cdba1a0b16f368bde03ce9c79c57306b39510da6ae5312a1a5b2c1",
- "sha256:647ec5bee7e4ec9f1034ab48173b5fa970d9a991e565549b965e93331f1328fe",
- "sha256:6e1e9e447856e9b7b3d38e1316ae9a8c92e7536ef48373de758ea055edfd5db5",
- "sha256:6ef1550bb5f55f71b97a6a395286db07f7f2c01c8890e613556df9a51da91e8d",
- "sha256:6ffa45cc55b18d4ac1396d1ddb029f139b1d3480f1594130e62bceadf2e1a838",
- "sha256:77f31cebd8c27a36af6c7346055ac564946e562080ee1a838da724585c67474f",
- "sha256:7a3b5b2c012d70c63d9d13c57ed1603709a4d9d7d473e4a9dfece0e4ea3d5f51",
- "sha256:7a7ddf981a0b953ade1c2379052d47ccda2f58ab678fca0671c7c7ca2f67aac2",
- "sha256:84de955314aa5e8d469b00b14d6d714b008087a0222b0f743e7ffac34ef56aff",
- "sha256:8dcfd14c712aa9dd18049280bfb2f95700ff6a8bde645e09f17c3ed3f05a0130",
- "sha256:928f92f80e2e8d6567b87d3316c1fd9860ccfe36e87a9a7f5237d4cda8baa1ba",
- "sha256:9384b07cfd3045b37b05ed002d1c255db02fb96506ad65f0f9b776b762a7572e",
- "sha256:96726839a42429318017e67a42cca75d4f0d5248a809b3cc2e125445edd7d50d",
- "sha256:96bbec47beb131bbf4bae05d8ef99ad9e5738f12717cfbbf16648b78b0232e87",
- "sha256:9bcf97b971289be69638d8b1b616f7e557e1342debc7fc86cf89d3f08960e411",
- "sha256:a0cf4d814689e58f57ecd5d8c523e6538417ca2e72ff52c007c64065cef50fb2",
- "sha256:a7c6147c6306f537cff59409609508a1d2eff81199f0302dd456bb9e7ea50c39",
- "sha256:a9266644064779840feec0e34f10a89b3ff1d2d6b751fe90017abcad1864fa7c",
- "sha256:afbe85b50ade42ddff5669947afde9e8a610e64d2c80be046d67ec4368e555fa",
- "sha256:afcda759a69c6a8be3aae764ec6733155aa4a5ad9aad4f398b52ba4037942fe3",
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- "sha256:bd3f711f4c99da0091ced41dccdc1bcf8be0281dc314d6d9c6b6cf5df66f37a9",
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- "version": "==3.11.9"
+ "version": "==3.11.11"
},
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+ "markers": "python_version >= '3.9'",
+ "version": "==1.3.2"
},
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@@ -124,130 +124,117 @@
},
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},
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+ "sha256:fce4f615f8ca31b2e61aa0eb5865a21e14f5629515c9151850aa936c02a1ee51"
+ ],
+ "markers": "python_version == '3.11'",
+ "version": "==2.2.1"
},
"paho-mqtt": {
"hashes": [
@@ -520,7 +507,6 @@
"sha256:6db9ba9b34ed5bc6b6e3812718c7e06e2fd7444540df2455d2c51bd58808feee"
],
"index": "pypi",
- "markers": "python_version >= '3.7'",
"version": "==2.1.0"
},
"pandas": {
@@ -569,7 +555,6 @@
"sha256:fffb8ae78d8af97f849404f21411c95062db1496aeb3e56f146f0355c9989319"
],
"index": "pypi",
- "markers": "python_version >= '3.9'",
"version": "==2.2.3"
},
"pika": {
@@ -578,7 +563,6 @@
"sha256:b2a327ddddf8570b4965b3576ac77091b850262d34ce8c1d8cb4e4146aa4145f"
],
"index": "pypi",
- "markers": "python_version >= '3.7'",
"version": "==1.3.2"
},
"propcache": {
@@ -671,125 +655,124 @@
},
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],
"index": "pypi",
- "markers": "python_version >= '3.8'",
- "version": "==2.10.2"
+ "version": "==2.10.4"
},
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],
"markers": "python_version >= '3.8'",
- "version": "==2.27.1"
+ "version": "==2.27.2"
},
"python-dateutil": {
"hashes": [
"sha256:37dd54208da7e1cd875388217d5e00ebd4179249f90fb72437e91a35459a0ad3",
"sha256:a8b2bc7bffae282281c8140a97d3aa9c14da0b136dfe83f850eea9a5f7470427"
],
- "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
+ "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
"version": "==2.9.0.post0"
},
"pytz": {
@@ -805,16 +788,15 @@
"sha256:70761cfe03c773ceb22aa2f671b4757976145175cdfca038c02654d061d6dcc6"
],
"index": "pypi",
- "markers": "python_version >= '3.8'",
"version": "==2.32.3"
},
"six": {
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- "sha256:8abb2f1d86890a2dfb989f9a77cfcfd3e47c2a354b01111771326f8aa26e0254"
+ "sha256:4721f391ed90541fddacab5acf947aa0d3dc7d27b2e1e8eda2be8970586c3274",
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],
- "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2'",
- "version": "==1.16.0"
+ "markers": "python_version >= '2.7' and python_version not in '3.0, 3.1, 3.2, 3.3'",
+ "version": "==1.17.0"
},
"tinydb": {
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@@ -830,7 +812,6 @@
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],
"index": "pypi",
- "markers": "python_full_version >= '3.5.3'",
"version": "==1.1.0"
},
"typing-extensions": {
@@ -851,11 +832,11 @@
},
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],
- "markers": "python_version >= '3.8'",
- "version": "==2.2.3"
+ "markers": "python_version >= '3.9'",
+ "version": "==2.3.0"
},
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@@ -968,7 +949,7 @@
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- "markers": "python_version >= '3.8'",
+ "markers": "python_version < '3.12'",
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},
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@@ -985,16 +966,15 @@
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],
"markers": "python_version >= '3.6'",
- "version": "==2024.8.30"
+ "version": "==2024.12.14"
},
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@@ -1066,188 +1046,174 @@
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- "markers": "python_version >= '3.8'",
+ "markers": "platform_python_implementation != 'PyPy'",
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},
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],
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- "markers": "python_version >= '3.9'",
- "version": "==7.6.8"
+ "version": "==7.6.10"
},
"cryptography": {
"hashes": [
@@ -1298,7 +1264,6 @@
"sha256:b63e4cee8abfc3136d3bc03a3d45a76a850bada4d6374d24c1716b0e01394a01"
],
"index": "pypi",
- "markers": "python_version >= '3.8'",
"version": "==2024.8.6"
},
"idna": {
@@ -1322,7 +1287,7 @@
"sha256:45e54197d28b7a7f1559e60b95e7c567032b602131fbd588f1497f47880aa68b",
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],
- "markers": "python_version >= '3.8'",
+ "markers": "python_version < '3.12'",
"version": "==8.5.0"
},
"iniconfig": {
@@ -1362,24 +1327,24 @@
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"sha256:c0a454ad016ca575060802ee4d590dd912e35c122fa04e70306de3d076cce755"
],
- "markers": "python_version >= '3.7'",
+ "markers": "sys_platform == 'linux'",
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},
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],
"markers": "python_version >= '3.7'",
- "version": "==3.1.4"
+ "version": "==3.1.5"
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],
- "markers": "python_version >= '3.8'",
- "version": "==25.5.0"
+ "markers": "platform_machine != 'ppc64le' and platform_machine != 's390x'",
+ "version": "==25.6.0"
},
"markdown-it-py": {
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@@ -1474,32 +1439,33 @@
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- "sha256:833b3b5f1783ce95834a13030300cea00cbdfd64ea29260d01af9c4821da0aa9",
- "sha256:a7b928862daddb29805a1010a0282f77f4b8b238a37b5f76bc6c0d16d930fd22",
- "sha256:ac536a4b5c073fdadd8f5f4889adabe1cbdae55305366fb870723c96ca7f49c3",
- "sha256:b8eb7affc590e542fa7981ef508cd1644f62176bcd10d4429890fc629b47f0bc",
- "sha256:c2e3f0d18cc101132fe10ab7ef5c4f41411297e639e23b64b5e888ccaad63f41",
- "sha256:d0adf00e2b2026fa10a42537b60d161e516f206781c7515e4e97e09f72a8c5d0",
- "sha256:d53a4577b6123ca1d7e8483fad3e13cb7eda28913d516bd0a648c1a473aa21a9",
- "sha256:d8325d51e47cb5b11f649d55e626d56c76041ba508cd59e0cb1cf687cc7612f1",
- "sha256:df8eac98fec80bd6f5fd0ae27a65de14f1e1a65a76d8e2237eb695f9cd1121d9",
- "sha256:e3dedd7858a21312f7675841529941035a2ac91057db13402c8fe907aa19205a",
- "sha256:ec9c8bf86e397cb88c560361f60fdce478b5edb8b93f04ead419b72fbe937ea6",
- "sha256:ed06ed78f6b69d57463b46a04f68f270605301e69d80756a8adf7519002de57d",
- "sha256:fc483dd8d20f8f8c010783a25a84db3bebeadced92d24d34b40d687f8043ac69",
- "sha256:fdb20740d24ab9f2a1341458a00a11205294e97e905de060eeab1ceca020c09c"
- ],
- "version": "==0.2.19"
+ "sha256:09f037c02fc2c43b211ff1523de32801dcfb0918648d8e651c36ef890f1731ec",
+ "sha256:0ae9cbd713524cdb81e64663d0d6aae26f678db9f2cd9db0bf162606f1f9f20c",
+ "sha256:10317cd96fe4bbd4eb6b95f3920b71c902157ad44fed103fdcde43e3b8ee8be6",
+ "sha256:181063c581defe683bd4bb78188ac9936d208aebbc74c7f7c16b6a32ae2ebb38",
+ "sha256:1b9a8340a0aab991c68a5ca938d35ef4a8a3f4bf1b455da8855a40bee1fa0ace",
+ "sha256:231addb7643c952cd6d71f1c8702d703f8fe34afcb20becb3efb319a501a12d7",
+ "sha256:3eb04b9c3deb13c3a375ea39fd4a3c00d1f92e8fb2349f25f1e3e4506751774b",
+ "sha256:47b2946c0e13057855209daeffb45dc910bd0c55daf10190bb0b4b60e2999784",
+ "sha256:4fd2e9248725ebcedac3997a8d3da0d90a12a28c9179c6ba51f1658938ac30d0",
+ "sha256:6ed834c68452a600f517dd3e1534dbfaff1f67f98899fecf139a055a25d99150",
+ "sha256:76e2f603b30c02ff6456b233a83fc377dedab6a50947b04e960a6b905637b776",
+ "sha256:813f1c8012dd64c990514b795508abb90789334f76a561fa0fd4ca32d2275330",
+ "sha256:8698db4c04b140800d1a1cd3067fda399e36e1e2b8fc1fe04292a907350a3e9b",
+ "sha256:92f3f1c4f47a2c6f3ca7317b1d5ced05bd29556a75d3a4e2715652ae9d15c05d",
+ "sha256:9705c42d7ff88a0bea546c82d7fe5e59135e3d3f057e485394f491248a1f8ed5",
+ "sha256:ac4d27dc836a476efffc6eb661994426b8b805c951b29c9cf2ff36bc9ad58bc5",
+ "sha256:ce3731c8f217685d33d9268362e5b4f770914e922bba94d368ab244a59a6c397",
+ "sha256:d2a176fd4306b6f0f178a3f67fac91bd97a3a8d8fafb771c9b9ef675ba5c8886",
+ "sha256:da87573f03084edae8eb87cfe811ec338606288f81d333c07d2a9a0b9b976c0b",
+ "sha256:ddefa9fd6794a87e37d05827d299d4b53a3ec6f23258101907b96029bfef138a",
+ "sha256:e1061a4ab6681f6bdf72b110eea0c4e1379d57c9de937db3be4202f7ad6043db",
+ "sha256:e1f7370b4e14cc03f5ae141ef30a1caf81fa5787711f80be9081418dd9eb79d2",
+ "sha256:eb4254b1dac4a1ee49919a5b3f1caf9803ea8dada1816d9e8289e63d3cd0dd9a",
+ "sha256:f7d564871833ddbe54df3aa59053b1110729d3a800cb7628ae8f42adb3d75208"
+ ],
+ "markers": "python_version >= '3.8'",
+ "version": "==0.2.20"
},
"packaging": {
"hashes": [
@@ -1555,9 +1521,17 @@
"sha256:965370d062bce11e73868e0335abac31b4d3de0e82f4007408d242b4f8610761"
],
"index": "pypi",
- "markers": "python_version >= '3.8'",
"version": "==8.3.4"
},
+ "pytest-ordering": {
+ "hashes": [
+ "sha256:27fba3fc265f5d0f8597e7557885662c1bdc1969497cd58aff6ed21c3b617de2",
+ "sha256:3f314a178dbeb6777509548727dc69edf22d6d9a2867bf2d310ab85c403380b6",
+ "sha256:561ad653626bb171da78e682f6d39ac33bb13b3e272d406cd555adb6b006bda6"
+ ],
+ "index": "pypi",
+ "version": "==0.6"
+ },
"readme-renderer": {
"hashes": [
"sha256:2fbca89b81a08526aadf1357a8c2ae889ec05fb03f5da67f9769c9a592166151",
@@ -1572,7 +1546,6 @@
"sha256:70761cfe03c773ceb22aa2f671b4757976145175cdfca038c02654d061d6dcc6"
],
"index": "pypi",
- "markers": "python_version >= '3.8'",
"version": "==2.32.3"
},
"requests-mock": {
@@ -1581,7 +1554,6 @@
"sha256:e9e12e333b525156e82a3c852f22016b9158220d2f47454de9cae8a77d371401"
],
"index": "pypi",
- "markers": "python_version >= '3.5'",
"version": "==1.12.1"
},
"requests-toolbelt": {
@@ -1613,7 +1585,7 @@
"sha256:2403533ef369eca6d2ba81718576c5e0f564d5cca1b58f73a8b23e7d4eeebd77",
"sha256:f356e6628222568e3af06f2eba8df495efa13b3b63081dafd4f7d9a7b7bc9f99"
],
- "markers": "python_version >= '3.6'",
+ "markers": "sys_platform == 'linux'",
"version": "==3.3.3"
},
"setuptools": {
@@ -1622,7 +1594,6 @@
"sha256:ce74b49e8f7110f9bf04883b730f4765b774ef3ef28f722cce7c273d253aaf7d"
],
"index": "pypi",
- "markers": "python_version >= '3.9'",
"version": "==75.6.0"
},
"snowballstemmer": {
@@ -1710,16 +1681,15 @@
"sha256:9c6025b203b51521d53e200f4a08b116dee7500a38591668c6a6033117bdc218"
],
"index": "pypi",
- "markers": "python_version >= '3.8'",
"version": "==6.0.1"
},
"urllib3": {
"hashes": [
- "sha256:ca899ca043dcb1bafa3e262d73aa25c465bfb49e0bd9dd5d59f1d0acba2f8fac",
- "sha256:e7d814a81dad81e6caf2ec9fdedb284ecc9c73076b62654547cc64ccdcae26e9"
+ "sha256:1cee9ad369867bfdbbb48b7dd50374c0967a0bb7710050facf0dd6911440e3df",
+ "sha256:f8c5449b3cf0861679ce7e0503c7b44b5ec981bec0d1d3795a07f1ba96f0204d"
],
- "markers": "python_version >= '3.8'",
- "version": "==2.2.3"
+ "markers": "python_version >= '3.9'",
+ "version": "==2.3.0"
},
"zipp": {
"hashes": [
diff --git a/lib/python/dbrepo/RestClient.py b/lib/python/dbrepo/RestClient.py
index 31c83fa55ef35ae76ca7d45e6ab0a0de0d094aac..f10cfdc0fb66b1a25fd92f92b2737d4a9dae73a8 100644
--- a/lib/python/dbrepo/RestClient.py
+++ b/lib/python/dbrepo/RestClient.py
@@ -522,7 +522,7 @@ class RestClient:
:raises ServiceError: If something went wrong with obtaining the information in the search service.
:raises ResponseCodeError: If something went wrong with the update.
"""
- url = f'/api/database/{database_id}'
+ url = f'/api/database/{database_id}/visibility'
response = self._wrapper(method="put", url=url, force_auth=True,
payload=ModifyVisibility(is_public=is_public, is_schema_public=is_schema_public))
if response.status_code == 202:
diff --git a/lib/python/dbrepo/api/dto.py b/lib/python/dbrepo/api/dto.py
index fabb834647e5c450c31134c97ce6baea8565881f..5100a7ae4e7c84ba16e51750a88b15ae5406d381 100644
--- a/lib/python/dbrepo/api/dto.py
+++ b/lib/python/dbrepo/api/dto.py
@@ -970,7 +970,8 @@ class Database(BaseModel):
exchange_name: str
internal_name: str
is_public: bool
- container: Container
+ is_schema_public: bool
+ container: ContainerBrief
identifiers: Optional[List[Identifier]] = field(default_factory=list)
subsets: Optional[List[Identifier]] = field(default_factory=list)
description: Optional[str] = None
diff --git a/lib/python/tests/conftest.py b/lib/python/tests/conftest.py
new file mode 100644
index 0000000000000000000000000000000000000000..5270a5bfba0c614fc3e16b559879dd6209f440dc
--- /dev/null
+++ b/lib/python/tests/conftest.py
@@ -0,0 +1,37 @@
+import logging
+import uuid
+
+import pytest
+
+from dbrepo.RestClient import RestClient
+from dbrepo.api.dto import Database
+
+logging.basicConfig(level=logging.DEBUG)
+
+
+def pytest_configure(config):
+ TestKeyValue.username = str(uuid.uuid4()).replace("-", "")[0:10]
+ TestKeyValue.password = str(uuid.uuid4()).replace("-", "")[0:10]
+
+
+@pytest.fixture(scope='session', name='rest_client')
+def user_rest_client() -> RestClient:
+ TestKeyValue.user_id = RestClient().create_user(username=f'{TestKeyValue.username}',
+ password=f'{TestKeyValue.password}',
+ email=f'{TestKeyValue.username}@example.com').id
+ return RestClient(username=TestKeyValue.username, password=TestKeyValue.password)
+
+
+@pytest.fixture(scope='session', name='database')
+def database() -> Database:
+ name = str(uuid.uuid4()).replace("-", "")[0:10]
+ return RestClient(username=TestKeyValue.username,
+ password=TestKeyValue.password).create_database(name=name, container_id=1, is_public=True,
+ is_schema_public=True)
+
+
+class TestKeyValue:
+ user_id: str = None
+ username: str = None
+ password: str = None
+ database_name: str = None
diff --git a/lib/python/tests/test_system_database.py b/lib/python/tests/test_system_database.py
new file mode 100644
index 0000000000000000000000000000000000000000..902b95435b09c755fa33cd592fbd7a9c9ddc81ee
--- /dev/null
+++ b/lib/python/tests/test_system_database.py
@@ -0,0 +1,34 @@
+import unittest
+import uuid
+
+import pytest
+
+
+class UserUnitTest(unittest.TestCase):
+
+ @pytest.fixture(autouse=True)
+ def prepare_fixture(self, rest_client, database):
+ self.rest_client = rest_client
+ self.database = database
+
+ @pytest.mark.usefixtures("rest_client")
+ def test_create_database_succeeds(self):
+ name = str(uuid.uuid4()).replace("-", "")[0:10]
+ # test
+ response = self.rest_client.create_database(name=name, container_id=1,
+ is_public=True, is_schema_public=True)
+ self.assertEqual(True, response.is_public)
+ self.assertEqual(True, response.is_schema_public)
+ self.assertEqual(None, response.description)
+
+ @pytest.mark.usefixtures("rest_client", "database")
+ def test_update_database_visibility_succeeds(self):
+ # test
+ response = self.rest_client.update_database_visibility(database_id=self.database.id, is_public=False,
+ is_schema_public=False)
+ self.assertEqual(False, response.is_public)
+ self.assertEqual(False, response.is_schema_public)
+
+
+if __name__ == "__main__":
+ unittest.main()
diff --git a/lib/python/tests/test_system_user.py b/lib/python/tests/test_system_user.py
new file mode 100644
index 0000000000000000000000000000000000000000..350b34110274b4697f58cf6ce96168fb6682315c
--- /dev/null
+++ b/lib/python/tests/test_system_user.py
@@ -0,0 +1,42 @@
+import unittest
+import uuid
+
+import pytest
+
+from conftest import TestKeyValue
+from dbrepo.RestClient import RestClient
+
+
+class UserUnitTest(unittest.TestCase):
+
+ @pytest.fixture(autouse=True)
+ def prepare_fixture(self, rest_client):
+ self.rest_client = rest_client
+
+ def test_get_users_succeeds(self):
+ # test
+ response = RestClient().get_users()
+
+ def test_create_user_succeeds(self):
+ username = str(uuid.uuid4()).replace("-", "")[0:10]
+ password = str(uuid.uuid4()).replace("-", "")[0:10]
+ # test
+ response = RestClient().create_user(username=f'{username}', password=f'{password}',
+ email=f'{username}@example.com')
+ self.assertEqual(username, response.username)
+
+ @pytest.mark.usefixtures("rest_client")
+ def test_update_user_succeeds(self):
+ # test
+ response = self.rest_client.update_user(user_id=TestKeyValue.user_id, theme='dark', language='de',
+ firstname='Foo', lastname='Bar', affiliation='TU Wien',
+ orcid='https://orcid.org/0000-0003-4216-302X')
+ self.assertEqual('dark', response.attributes.theme)
+ self.assertEqual('Foo', response.given_name)
+ self.assertEqual('Bar', response.family_name)
+ self.assertEqual('TU Wien', response.attributes.affiliation)
+ self.assertEqual('https://orcid.org/0000-0003-4216-302X', response.attributes.orcid)
+
+
+if __name__ == "__main__":
+ unittest.main()