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Unverified Commit 10e6bd89 authored by Martin Weise's avatar Martin Weise
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docs/images/architecture-docker-compose.png
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docs/images/architecture-docker-compose.svg
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text-align: left;"><div xmlns="http://www.w3.org/1999/xhtml" style="display: flex; align-items: unsafe center; justify-content: unsafe center; width: 1px; height: 1px; padding-top: 374px; margin-left: 554px;"><div data-drawio-colors="color: rgb(0, 0, 0); background-color: rgb(255, 255, 255); " style="box-sizing: border-box; font-size: 0px; text-align: center;"><div style="display: inline-block; font-size: 9px; font-family: Helvetica; color: rgb(0, 0, 0); line-height: 1.2; pointer-events: all; background-color: rgb(255, 255, 255); white-space: nowrap;">JDBC</div></div></div></foreignObject><text x="554" y="377" fill="rgb(0, 0, 0)" font-family="Helvetica" font-size="9px" text-anchor="middle">JDBC</text></switch></g><rect x="350" y="324" width="130" height="40" rx="6" ry="6" fill="rgb(255, 255, 255)" stroke="rgb(0, 0, 0)" pointer-events="all"/><g transform="translate(-0.5 -0.5)"><switch><foreignObject pointer-events="none" width="100%" height="100%" requiredFeatures="http://www.w3.org/TR/SVG11/feature#Extensibility" style="overflow: visible; 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\ No newline at end of file
docs/system-services-authentication.md
+ 16
− 63
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......@@ -4,25 +4,23 @@ author: Martin Weise
# Authentication Service
## tl;dr
!!! debug "Debug Information"
* Ports: 8080/tcp, 8443/tcp
* Admin Console: `http://:8443/`
* Ports: 8080/tcp
* Admin Console: `http://:8080/api/auth/admin/`
* Health: `http://:8080/api/auth/health`
* Prometheus: `http://:8080/api/auth/metrics`
## Overview
Very specific to the deployment of the organization. In our reference implementation we implement a *security assertion
markup language* (SAML) service provider and use our institutional SAML identity provider for obtaining account data
through an encrypted channel.
From version 1.2 onwards we use Keycloak for authentication and deprecated the previous Spring Boot application.
Consequently,
the authentication will be through Keycloak.
!!! warning "Unsupported Keycloak features"
Due to no demand at the time, we currently do not support the following Keycloak features:
* E-Mail verification
* Temporary passwords
Consequently, the authentication will be through Keycloak.
By default, the Authentication Service comes with a self-signed certificate valid 3 months from build date. For
deployment it is *highly encouraged* to use your own certificate, properly issued by a trusted PKI, e.g. G&#201;ANT. For
......@@ -216,58 +214,13 @@ public ResponseEntity<DatabaseBriefDto> create(@NotNull Long containerId,
| `update-semantic-concept` | Can update own table column concept |
| `update-semantic-unit` | Can update own table column unit |
## API
### Obtain Access Token
Access tokens are needed for almost all operations.
=== "Terminal"
``` console
curl -X POST \
-d "username=foo&password=bar&grant_type=password&client_id=dbrepo-client&scope=openid&client_secret=MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG" \
http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token
```
=== "Python"
``` py
import requests
auth = requests.post("http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token", data={
"username": "foo",
"password": "bar",
"grant_type": "password",
"client_id": "dbrepo-client",
"scope": "openid",
"client_secret": "MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG"
})
print(auth.json()["access_token"])
```
### Refresh Access Token
## Limitations
Using the response from above, a new access token can be created via the refresh token provided.
* No support for sending e-mails through Keycloak
* No support for temporary passwords
* No support for multi-factor authentication
=== "Terminal"
## Security
``` console
curl -X POST \
-d "grant_type=refresh_token&client_id=dbrepo-client&refresh_token=THE_REFRESH_TOKEN&client_secret=MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG" \
http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token
```
=== "Python"
``` py
import requests
auth = requests.post("http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token", data={
"grant_type": "refresh_token",
"client_id": "dbrepo-client",
"client_secret": "MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG",
"refresh_token": "THE_REFRESH_TOKEN"
})
print(auth.json()["access_token"])
```
1. Mount your TLS certificate / private key pair into `/app/tls.crt` and `/app/tls.key` and
set `KC_HTTPS_CERTIFICATE_FILE=/app/tls.crt` and set `KC_HTTPS_CERTIFICATE_KEY_FILE=/app/tls.key`.
docs/system-services-broker.md
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− 3
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......@@ -4,17 +4,46 @@ author: Martin Weise
# Broker Service
## tl;dr
!!! debug "Debug Information"
* Ports: 5672/tcp, 15672/tcp
* RabbitMQ Management Plugin: `http://:15672`
* RabbitMQ Prometheus Plugin: `http://:15692/metrics`
## Overview
It holds exchanges and topics responsible for holding AMQP messages for later consumption. We
use [RabbitMQ](https://www.rabbitmq.com/) in the implementation. The AMQP endpoint listens to port `5672` for
regular declares and offers a management interface at port `15672`.
use [RabbitMQ](https://www.rabbitmq.com/) in the implementation. By default, the endpoint listens to the insecure port `5672` for incoming
AMQP tuples and insecure port `15672` for the management UI.
The default credentials are:
The default configuration creates a user with administrative privileges:
* Username: `fda`
* Password: `fda`
* Roles: `["administrator"]`
The Broker Service allows two ways of authentication:
1. Plain
2. OAuth2
For detailed examples how to authenticate with the Broker Service see
the [usage](/infrastructures/dbrepo/latest/usage-broker) page.
## Limitations
* No support for MQTT messaging as the protocol does not support virtual hosts other than `/`.
## Security
For a secure deployment it is necessary to configure the Broker Service as follows:
1. Download the [`rabbitmq.conf`](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-broker-service/rabbitmq.conf.secure) and
change the `default_user` and `default_pass` lines before mounting it to `/etc/rabbitmq/rabbitmq.conf`.
2. Mount your previously generated certificate and RSA public key pair (PEM-encoded) to `/app/cert.pem`
and `/app/pubkey.pem`. Note that these are *not* used for TLS encryption, but only for authentication of users. It
is not recommended to use "real" TLS certificates, self-signed certificates with *sufficient keylength* are best-practice.
3. Mount your TLS certificate authority file into `/etc/rabbitmq/cacert.crt` and your TLS certificate / private key pair
into `/etc/tls/tls.crt` and `/etc/tls/tls.key`.
docs/system-services-gateway.md
+ 26
− 4
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......@@ -4,12 +4,34 @@ author: Martin Weise
# Gateway Service
## tl;dr
!!! debug "Debug Information"
* Ports: 9095/tcp
* Info: `http://:9095/actuator/info`
* Health: `http://:9095/actuator/health`
* Prometheus: `http://:9095/actuator/prometheus`
* Ports: 80/tcp, 443/tcp
## Overview
Provides a single point of access to the *application programming interface* (API) and configures a
standard [NGINX](https://www.nginx.com/) reverse proxy for load balancing, SSL/TLS configuration.
## Limitations
(none)
## Security
1. Enable TLS encryption by downloading
the [`dbrepo.conf`](https://gitlab.phaidra.org/fair-data-austria-db-repository/fda-services/-/raw/dev/dbrepo-gateway-service/dbrepo.conf)
and editing the *server* block to include your TLS certificate (with trust chain) `fullchain.pem` and TLS private key
`privkey.pem` (PEM-encoded).
```nginx
server {
listen 443 ssl;
server_name _;
ssl_certificate /etc/nginx/fullchain.pem;
ssl_certificate_key /etc/nginx/privkey.pem;
...
}
```
docs/system-services-metadata.md
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− 0
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......@@ -4,6 +4,8 @@ author: Martin Weise
# Metadata Service
## tl;dr
!!! debug "Debug Information"
* Ports: 9099/tcp
......@@ -12,6 +14,8 @@ author: Martin Weise
* Prometheus: `http://:9099/actuator/prometheus`
* Swagger UI: `http://:9099/swagger-ui/index.html` <a href="/infrastructures/dbrepo/latest/swagger/metadata" target="_blank">:fontawesome-solid-square-up-right: view online</a>
## Overview
This microservice manages:
* Databases
......@@ -37,3 +41,11 @@ Service.
This microservice handles table operations inside a database that is managed by the Database Service. We
use [Hibernate](https://hibernate.org/orm/) for schema and data ingest operations.
## Limitations
(none)
## Security
(none)
docs/system-services-upload.md
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− 9
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......@@ -4,24 +4,24 @@ author: Martin Weise
# Upload Service
## tl;dr
!!! debug "Debug Information"
* Ports: 1080/tcp
## Overview
Upload files using one of the official the TUSd clients:
* [NodeJS / JavaScript](https://github.com/tus/tus-js-client)
* [Java](https://github.com/tus/tus-java-client)
* [Python](https://github.com/tus/tus-py-client)
## Example (Python)
## Limitations
(none)
Uploads a file `file.csv` in 200 byte chunks.
## Security
```python
#!/bin/env python3
from tusclient import client
my_client = client.TusClient('http://localhost/api/upload/files')
uploader = my_client.uploader('/path/to/file.csv', chunk_size=200)
uploader.upload()
```
(none)
docs/usage-auth.md 0 → 100644
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---
author: Martin Weise
---
# Authentication Service
## Obtain Access Token
Access tokens are needed for almost all operations.
=== "Terminal"
``` console
curl -X POST \
-d "username=foo&password=bar&grant_type=password&client_id=dbrepo-client&scope=openid&client_secret=MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG" \
http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token
```
=== "Python"
``` py
import requests
auth = requests.post("http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token", data={
"username": "foo",
"password": "bar",
"grant_type": "password",
"client_id": "dbrepo-client",
"scope": "openid",
"client_secret": "MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG"
})
print(auth.json()["access_token"])
```
## Refresh Access Token
Using the response from above, a new access token can be created via the refresh token provided.
=== "Terminal"
``` console
curl -X POST \
-d "grant_type=refresh_token&client_id=dbrepo-client&refresh_token=THE_REFRESH_TOKEN&client_secret=MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG" \
http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token
```
=== "Python"
``` py
import requests
auth = requests.post("http://localhost/api/auth/realms/dbrepo/protocol/openid-connect/token", data={
"grant_type": "refresh_token",
"client_id": "dbrepo-client",
"client_secret": "MUwRc7yfXSJwX8AdRMWaQC3Nep1VjwgG",
"refresh_token": "THE_REFRESH_TOKEN"
})
print(auth.json()["access_token"])
```
docs/usage-upload.md 0 → 100644
+ 17
− 0
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---
author: Martin Weise
---
# Upload Service
Uploads a file `file.csv` in 200 byte chunks.
=== "Python"
```python
#!/bin/env python3
from tusclient import client
my_client = client.TusClient('http://localhost/api/upload/files')
uploader = my_client.uploader('/path/to/file.csv', chunk_size=200)
uploader.upload()
```
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misc/architecture.drawio
+ 117
− 280
View file @ 10e6bd89
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......
mkdocs.yml
+ 2
− 0
View file @ 10e6bd89
......@@ -28,8 +28,10 @@ nav:
- User Interface: system-other-ui.md
- Usage:
- Overview: usage-overview.md
- Authentication Service: usage-auth.md
- Broker Service: usage-broker.md
- Identifier Service: usage-identifier.md
- Upload Service: usage-upload.md
- publications.md
- contact.md
extra_css:
......
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