From 72c783c3f73e3d831c48cadb10c7eeb2cd98bf2d Mon Sep 17 00:00:00 2001
From: lkugler <lukas.kugler@gmail.com>
Date: Wed, 28 Apr 2021 10:54:26 +0200
Subject: [PATCH] .
---
scripts/run_obs_diag.py | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/scripts/run_obs_diag.py b/scripts/run_obs_diag.py
index f3e82c4..060eaed 100644
--- a/scripts/run_obs_diag.py
+++ b/scripts/run_obs_diag.py
@@ -1,6 +1,6 @@
import os, sys, shutil, glob
from config.cfg import exp, cluster
-from utils import symlink, copy, sed_inplace, append_file
+from .utils import symlink, copy, sed_inplace, append_file
rundir_program = '/home/fs71386/lkugler/data/DART-WRF/rundir/'
@@ -58,7 +58,7 @@ def run_obs_seq_to_netcdf(filepaths, f_out='./obs_epoch.nc'):
write_input_filelist(filepaths)
print('------ running obs_seq_to_netcdf program')
- shutil.copy(cluster.dart_srcdir+'/obs_seq_to_netcdf-bak', rundir_program+'/obs_seq_to_netcdf')
+ #shutil.copy(cluster.dart_srcdir+'/obs_seq_to_netcdf-bak', rundir_program+'/obs_seq_to_netcdf')
os.chdir(rundir_program)
os.system('./obs_seq_to_netcdf >& obs_seq_to_netcdf.log') # caution, overwrites its own binary?!
shutil.move(rundir_program+'/obs_epoch_001.nc', f_out)
@@ -67,6 +67,7 @@ def run_obs_seq_to_netcdf(filepaths, f_out='./obs_epoch.nc'):
if __name__ == '__main__':
#folder_obs_seq_final = '/home/fs71386/lkugler/data/DART-WRF/rundir/test'
+ print('python run_obs_diag.py ')
folder_obs_seq_final = str(sys.argv[1])
files = sorted(glob.glob(folder_obs_seq_final+'/*.final')) # input for obs_diag program
--
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