diff --git a/scripts/run_obs_diag.py b/scripts/run_obs_diag.py index f3e82c4621508ed09f196a8b7e4d043ea3d69488..060eaedce9fc3d4cb39a4cd25c9b4f167b0f1550 100644 --- a/scripts/run_obs_diag.py +++ b/scripts/run_obs_diag.py @@ -1,6 +1,6 @@ import os, sys, shutil, glob from config.cfg import exp, cluster -from utils import symlink, copy, sed_inplace, append_file +from .utils import symlink, copy, sed_inplace, append_file rundir_program = '/home/fs71386/lkugler/data/DART-WRF/rundir/' @@ -58,7 +58,7 @@ def run_obs_seq_to_netcdf(filepaths, f_out='./obs_epoch.nc'): write_input_filelist(filepaths) print('------ running obs_seq_to_netcdf program') - shutil.copy(cluster.dart_srcdir+'/obs_seq_to_netcdf-bak', rundir_program+'/obs_seq_to_netcdf') + #shutil.copy(cluster.dart_srcdir+'/obs_seq_to_netcdf-bak', rundir_program+'/obs_seq_to_netcdf') os.chdir(rundir_program) os.system('./obs_seq_to_netcdf >& obs_seq_to_netcdf.log') # caution, overwrites its own binary?! shutil.move(rundir_program+'/obs_epoch_001.nc', f_out) @@ -67,6 +67,7 @@ def run_obs_seq_to_netcdf(filepaths, f_out='./obs_epoch.nc'): if __name__ == '__main__': #folder_obs_seq_final = '/home/fs71386/lkugler/data/DART-WRF/rundir/test' + print('python run_obs_diag.py ') folder_obs_seq_final = str(sys.argv[1]) files = sorted(glob.glob(folder_obs_seq_final+'/*.final')) # input for obs_diag program