From da21a0e56d4ba2213e2a1d2673f767810cd10813 Mon Sep 17 00:00:00 2001
From: lkugler <lukas.kugler@gmail.com>
Date: Tue, 18 Apr 2023 19:46:43 +0200
Subject: [PATCH] slurm job names
---
dartwrf/workflows.py | 30 +++++++++++++++---------------
1 file changed, 15 insertions(+), 15 deletions(-)
diff --git a/dartwrf/workflows.py b/dartwrf/workflows.py
index f534bf5..3c06dd2 100644
--- a/dartwrf/workflows.py
+++ b/dartwrf/workflows.py
@@ -151,7 +151,7 @@ class WorkFlows(object):
mv $rundir/rsl.out.0000 $rundir/rsl.out.input
done
"""
- id = self.cluster.run_job(cmd, "ideal", cfg_update={"ntasks": str(exp.n_ens),
+ id = self.cluster.run_job(cmd, "ideal"+exp.expname, cfg_update={"ntasks": str(exp.n_ens),
"time": "10", "mem": "100G"}, depends_on=[depends_on])
return id
@@ -165,7 +165,7 @@ class WorkFlows(object):
pstr = ' perturb'
cmd = self.cluster.python+' '+self.cluster.scripts_rundir+'/create_wbubble_wrfinput.py'+pstr
- id = self.cluster.run_job(cmd, "ins_wbubble", cfg_update={"time": "5"}, depends_on=[depends_on])
+ id = self.cluster.run_job(cmd, "ins_wbubble"+exp.expname, cfg_update={"time": "5"}, depends_on=[depends_on])
return id
def run_ENS(self, begin, end, depends_on=None, first_minute=True,
@@ -232,13 +232,13 @@ class WorkFlows(object):
time_in_simulation_hours = (end-begin).total_seconds()/3600
runtime_wallclock_mins_expected = int(8+time_in_simulation_hours*9.5) # usually below 9 min/hour
- id = self.cluster.run_job(cmd, "WRF", cfg_update={"array": "1-"+str(self.cluster.size_jobarray), "ntasks": "10", "nodes": "1",
- "time": str(runtime_wallclock_mins_expected), "mem": "30G"}, depends_on=[id])
+ id = self.cluster.run_job(cmd, "WRF"+exp.expname, cfg_update={"array": "1-"+str(self.cluster.size_jobarray), "ntasks": "10", "nodes": "1",
+ "time": str(runtime_wallclock_mins_expected), "mem": "40G"}, depends_on=[id])
return id
def assimilate(self, assim_time, prior_init_time, prior_valid_time, prior_path_exp,
- depends_on=None):
+ depends_on=None):
"""Creates observations from a nature run and assimilates them.
Args:
@@ -258,7 +258,7 @@ class WorkFlows(object):
+prior_valid_time.strftime('%Y-%m-%d_%H:%M ')
+prior_path_exp)
- id = self.cluster.run_job(cmd, "Assim", cfg_update={"ntasks": "12", "time": "60",
+ id = self.cluster.run_job(cmd, "Assim"+exp.expname, cfg_update={"ntasks": "12", "time": "60",
"mem": "200G", "ntasks-per-node": "12", "ntasks-per-core": "2"}, depends_on=[depends_on])
return id
@@ -275,19 +275,19 @@ class WorkFlows(object):
+prior_init_time.strftime(' %Y-%m-%d_%H:%M')
+prior_valid_time.strftime(' %Y-%m-%d_%H:%M')
+tnew)
- id = self.cluster.run_job(cmd, "IC-prior", cfg_update=dict(time="8"), depends_on=[depends_on])
+ id = self.cluster.run_job(cmd, "IC-prior"+exp.expname, cfg_update=dict(time="8"), depends_on=[depends_on])
return id
def update_IC_from_DA(self, assim_time, depends_on=None):
cmd = self.cluster.python+' '+self.cluster.scripts_rundir+'/update_IC.py '+assim_time.strftime('%Y-%m-%d_%H:%M')
- id = self.cluster.run_job(cmd, "IC-update", cfg_update=dict(time="8"), depends_on=[depends_on])
+ id = self.cluster.run_job(cmd, "IC-update"+exp.expname, cfg_update=dict(time="8"), depends_on=[depends_on])
return id
def create_satimages(self, init_time, depends_on=None):
- cmd = self.cluster.python_verif+' ~/RTTOV-WRF/run_init.py '+self.cluster.archivedir+init_time.strftime('/%Y-%m-%d_%H:%M/')
- id = self.cluster.run_job(cmd, "RTTOV", cfg_update={"ntasks": "12", "time": "80", "mem": "200G"}, depends_on=[depends_on])
+ cmd = 'module purge; module load netcdf-fortran/4.5.3-gcc-8.5.0-qsqbozc; python ~/RTTOV-WRF/run_init.py '+self.cluster.archivedir+init_time.strftime('/%Y-%m-%d_%H:%M/')
+ id = self.cluster.run_job(cmd, "RTTOV"+exp.expname, cfg_update={"ntasks": "12", "time": "120", "mem": "200G"}, depends_on=[depends_on])
return id
@@ -302,15 +302,15 @@ class WorkFlows(object):
cmd = self.cluster.python_verif+' /jetfs/home/lkugler/osse_analysis/plot_from_raw/analyze_fc.py '+exp.expname+' has_node sat verif1d FSS BS'
self.cluster.run_job(cmd, "verif-SAT-"+exp.expname,
- cfg_update={"time": "60", "mail-type": "FAIL,END", "ntasks": "20",
- "ntasks-per-node": "20", "ntasks-per-core": "1", "mem": "100G",}, depends_on=[depends_on])
+ cfg_update={"time": "60", "mail-type": "FAIL,END", "ntasks": "15",
+ "ntasks-per-node": "15", "ntasks-per-core": "1", "mem": "100G",}, depends_on=[depends_on])
def verify_wrf(self, depends_on=None):
- cmd = self.cluster.python_verif+' /jetfs/home/lkugler/osse_analysis/plot_from_raw/analyze_fc.py '+exp.expname+' has_node wrf verif1d verif3d FSS BS'
+ cmd = self.cluster.python_verif+' /jetfs/home/lkugler/osse_analysis/plot_from_raw/analyze_fc.py '+exp.expname+' has_node wrf verif1d FSS BS'
self.cluster.run_job(cmd, "verif-WRF-"+exp.expname,
- cfg_update={"time": "120", "mail-type": "FAIL,END", "ntasks": "20",
- "ntasks-per-node": "20", "ntasks-per-core": "1", "mem": "250G"}, depends_on=[depends_on])
+ cfg_update={"time": "120", "mail-type": "FAIL,END", "ntasks": "15",
+ "ntasks-per-node": "15", "ntasks-per-core": "1", "mem": "180G"}, depends_on=[depends_on])
def verify_fast(self, depends_on=None):
cmd = self.cluster.python_verif+' /jetfs/home/lkugler/osse_analysis/plot_fast/plot_single_exp.py '+exp.expname
--
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